prot_P-littoralis_Contig158.129.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig158.129.1
Unique Nameprot_P-littoralis_Contig158.129.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length38
Homology
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BLAST of mRNA_P-littoralis_Contig158.129.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 8.840e-9
Identity = 26/36 (72.22%), Postives = 30/36 (83.33%), Query Frame = 0 
Query:    2 GNQCKRGQSFARAMQMFPGKGMDRIPTEVVLALLRH 37
            GNQC+RG  FARAM MF GKGM+ IP +VVLALLR+
Sbjct:  188 GNQCRRGDCFARAMGMFFGKGMEGIPRDVVLALLRY 223
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig158.129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE8.840e-972.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig158contigP-littoralis_Contig158:480550..480663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig158.129.1mRNA_P-littoralis_Contig158.129.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig158 480428..481037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig158.129.1 ID=prot_P-littoralis_Contig158.129.1|Name=mRNA_P-littoralis_Contig158.129.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=38bp
MGNQCKRGQSFARAMQMFPGKGMDRIPTEVVLALLRH*
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