prot_P-littoralis_Contig158.119.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig158.119.2
Unique Nameprot_P-littoralis_Contig158.119.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length302
Homology
BLAST of mRNA_P-littoralis_Contig158.119.2 vs. uniprot
Match: A0A6H5KRI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI1_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 1.100e-98
Identity = 164/218 (75.23%), Postives = 166/218 (76.15%), Query Frame = 0
Query:    1 MDMDTATVSTPARQSLGARPAVTPTQSAKKDEDERCKRRTSGPRAVGTDGQQATPDLTKGNGPNYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHCTAGVHARVARWWSSNADSNEDRAFTGNCTSTGKILAAVVK--------DEDLACYYGLKKSFSGRSTTWVLSRSSLARERADAQWSFCLPAGWAEEYGADGSWKFKTSKGGTPVSDIL 210
            MDMDTATVSTPARQSLG RPAVTPTQSAKKDEDER KRRTSGPRAVGTD QQAT D TKGNGPNYP GF+PGREGSDGAKLPVYMFLQQG LEEGVQEH TA VHA VARWWSS ADSNEDRAFTGN TSTGKILA+VVK        DEDLA YYGLKKSFSG                            WAEEY ADGSWKFKTSKGGTPVS  L
Sbjct:   22 MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPCGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTTAEVHAHVARWWSSYADSNEDRAFTGNRTSTGKILASVVKADLYIPRQDEDLAFYYGLKKSFSG----------------------------WAEEYSADGSWKFKTSKGGTPVSVSL 211          
BLAST of mRNA_P-littoralis_Contig158.119.2 vs. uniprot
Match: A0A6H5K1G6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G6_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 2.420e-53
Identity = 93/101 (92.08%), Postives = 94/101 (93.07%), Query Frame = 0
Query:    1 MDMDTATVSTPARQSLGARPAVTPTQSAKKDEDERCKRRTSGPRAVGTDGQQATPDLTKGNGPNYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHCT 101
            MDMDTATVSTPARQSLG RPAVTPTQSAKKDEDER KRRTSGPRAVGTD QQAT D TKGNGPNYPRGF+PGREGSDGAKLPVYMFLQQG LEEGVQEH T
Sbjct:   22 MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPRGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTT 122          
BLAST of mRNA_P-littoralis_Contig158.119.2 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 3.560e-30
Identity = 65/93 (69.89%), Postives = 76/93 (81.72%), Query Frame = 0
Query:  208 DILEMRFAHIRAGMGCHKAPTASQAAQAGMHGDTCRLSHGERRRNSSRSGGQPFDIQQGATLRVALPVNAEERGEVVRAATWRNADHVFETRS 300
            DILE RFAHIR GMG HKAPTA+QAA+   HGDTCR+SHG +RRN+SRS G  F++Q  A++RVALPVNA ER EVVRAATW   DHVFE+R+
Sbjct:  800 DILEHRFAHIRTGMGTHKAPTATQAARQAKHGDTCRVSHGLQRRNASRSTGS-FEVQSSASIRVALPVNASEREEVVRAATWDRDDHVFESRA 891          
BLAST of mRNA_P-littoralis_Contig158.119.2 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.400e-22
Identity = 55/93 (59.14%), Postives = 64/93 (68.82%), Query Frame = 0
Query:  208 DILEMRFAHIRAGMGCHKAPTASQAAQAGMHGDTCRLSHGERRRNSSRSGGQPFDIQQGATLRVALPVNAEERGEVVRAATWRNADHVFETRS 300
            DILE RFAHIR+G G HK PTA QA +A   GDT R+ HG RRRNSSRS G  F ++    +R A P NA ER +VVRA T  +A HVFE+RS
Sbjct:  576 DILEHRFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNSSRSAGMAFQLEDSQGVRAAFPANASERAQVVRAETRDDAHHVFESRS 668          
BLAST of mRNA_P-littoralis_Contig158.119.2 vs. uniprot
Match: A0A6H5K994_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K994_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.720e-14
Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 0
Query:  140 KDEDLACYYGLKKSFSGRSTTWVLSRSSLARERADAQWSFC--LPAGWAEEYGADGSWKFKTSKGGTPVSDILE 211
            +DEDLA YYGL+K  S + T WVLSRSSL  ERA+A  SF   LPAGW EE+G D SW FK +  GTPV+  +E
Sbjct:   63 RDEDLAQYYGLRK-VSSKPTKWVLSRSSLGEERAEAHISFGFGLPAGWCEEFGPDHSWTFKKTHDGTPVAISVE 135          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig158.119.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KRI1_9PHAE1.100e-9875.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1G6_9PHAE2.420e-5392.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KFP1_9PHAE3.560e-3069.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Z3_9PHAE1.400e-2259.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K994_9PHAE1.720e-1459.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig158contigP-littoralis_Contig158:435148..436643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig158.119.2mRNA_P-littoralis_Contig158.119.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig158 435144..437763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig158.119.2 ID=prot_P-littoralis_Contig158.119.2|Name=mRNA_P-littoralis_Contig158.119.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=302bp
MDMDTATVSTPARQSLGARPAVTPTQSAKKDEDERCKRRTSGPRAVGTDG
QQATPDLTKGNGPNYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHC
TAGVHARVARWWSSNADSNEDRAFTGNCTSTGKILAAVVKDEDLACYYGL
KKSFSGRSTTWVLSRSSLARERADAQWSFCLPAGWAEEYGADGSWKFKTS
KGGTPVSDILEMRFAHIRAGMGCHKAPTASQAAQAGMHGDTCRLSHGERR
RNSSRSGGQPFDIQQGATLRVALPVNAEERGEVVRAATWRNADHVFETRS
V*
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