prot_P-littoralis_Contig158.114.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig158.114.1
Unique Nameprot_P-littoralis_Contig158.114.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length255
Homology
BLAST of mRNA_P-littoralis_Contig158.114.1 vs. uniprot
Match: D7G979_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G979_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 6.020e-30
Identity = 83/139 (59.71%), Postives = 92/139 (66.19%), Query Frame = 0
Query:    1 MMAQGFRNVMA-LVCLLAASASAFVMPIPAARASALAPRAVVSASTSA---LRPSARHSSRSALFMAE-------------GVEEEAAEAVESAVDTAKDATTSVKSFFAPNENIRLGSSRDQDGKSNVWAVEPKMRVE 122
            MM QGF +V A  VCLL AS SAFV  +P+AR  ALAPRA  + +      LR SARHS RSALFM+E              V E+         D A+DATTSVKSFFAPNEN+RLGSSRDQDGKSNVWAVEPKMRVE
Sbjct:    1 MMVQGFSSVFASAVCLLTASTSAFV--VPSARVHALAPRAAAATTXXXXXXLRTSARHSRRSALFMSEEXXXXXXXXXXXXXVAEQ---------DPAQDATTSVKSFFAPNENVRLGSSRDQDGKSNVWAVEPKMRVE 128          
BLAST of mRNA_P-littoralis_Contig158.114.1 vs. uniprot
Match: A0A836C6Z0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6Z0_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.360e-8
Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 0
Query:   91 FFAPNENIRLGSSRDQDGKSNVWAVEPKMRVEQ 123
            FF PN N+R G+SRDQDGKSNVWA+EPKM+VE+
Sbjct:   79 FFQPNANMRYGASRDQDGKSNVWAIEPKMKVEE 111          
BLAST of mRNA_P-littoralis_Contig158.114.1 vs. uniprot
Match: A0A835YKW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW3_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.010e-7
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 0
Query:   91 FFAPNENIRLGSSRDQDGKSNVWAVEPKMRVE 122
            FF PN N+R G+SRDQDGKSNVWA+EPKM V+
Sbjct:   86 FFQPNANMRYGASRDQDGKSNVWAIEPKMAVD 117          
BLAST of mRNA_P-littoralis_Contig158.114.1 vs. uniprot
Match: A0A7S3NDQ4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NDQ4_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 5.800e-5
Identity = 21/32 (65.62%), Postives = 28/32 (87.50%), Query Frame = 0
Query:   92 FAPNENIRLGSSRDQDGKSNVWAVEPKMRVEQ 123
             +P ++ +LGSS DQDGKSN+WAVEPKM+VE+
Sbjct:   53 LSPPKSTKLGSSIDQDGKSNIWAVEPKMQVEE 84          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig158.114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G979_ECTSI6.020e-3059.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C6Z0_9STRA1.360e-875.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKW3_9STRA2.010e-775.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3NDQ4_9STRA5.800e-565.63Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig158contigP-littoralis_Contig158:407927..415032 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig158.114.1mRNA_P-littoralis_Contig158.114.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig158 407658..416572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig158.114.1 ID=prot_P-littoralis_Contig158.114.1|Name=mRNA_P-littoralis_Contig158.114.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=255bp
MMAQGFRNVMALVCLLAASASAFVMPIPAARASALAPRAVVSASTSALRP
SARHSSRSALFMAEGVEEEAAEAVESAVDTAKDATTSVKSFFAPNENIRL
GSSRDQDGKSNVWAVEPKMRVEQCFATVKAKYRPCNVFLEVSISNVVVFC
RQPRVEQARSCGRNNRSAGGVDVGNHRIASRCRLPLTISNPVNKIDKYER
KKKQLKLNMVFVALLVSTTAGQNRLRRVLYLFVGIYLRSRQSQLSRALLY
ASVV*
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