mRNA_P-littoralis_Contig158.56.11 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig158.56.11 vs. uniprot
Match: D8LN43_ECTSI (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN43_ECTSI) HSP 1 Score: 1399 bits (3620), Expect = 0.000e+0 Identity = 812/1177 (68.99%), Postives = 863/1177 (73.32%), Query Frame = 2
Query: 179 MGAVRIRETYLRGDRLLISMRDTLLGEEGGGXXXEGAGPSQRPTRTVGSEDSRWQEKREGQRRCRSYVCPTADFLQCYLELFDRPSFAACFQRGXXXXXXXXXAEEGRGCNLLL----------------------LHSELSKLTGATGALSMKQERRLAQIARALPGTLVFFDKFCPDLHGATTTXXXXXXAGPHVDGRTTSDGREGDVRHPSPPTSPPSKHLAFSSSXXXXXCXXXSSVLAACRWCSAELENASVFVLSDXXXXXXXXXXXXXXXXXHSRRAAVQGFSSDGDAHQAGTGVGEDVEGGSGTPRVVLSLRDFLGGFVWGEAGEELARRGDLLRRMHLANKAATSASSGASRGE--GDTRASSPLSRPHPSKTQLEALVAGGEALKGRLDVFEHNPKEGLVVVGAGGGAGAEALEGWTDVAGRMKVLVVGREGMNRSIHGDTVVVTLLPRRRWRAATDRMRLTHAAGEEEDIPLGLESDXXXXXXXXXXXXXXXGDAPPGAMPTGFVVGVVEEGRRPYVVTIPPEETVGQGGSATVAAVPMDPRVPKIRIKTRQLAKISGQRLVVTVDGWDVGHMFPFGHYVTSLGPVGEVSSEAAALLVECRTSFHPFSFNALASLPLVPNPPKESQKPRDALTPPATLAQRERPEDGFGKAPRWQDSGWRVQESDVVGRRDLRGERVVSVDPPGCQDIDDAMHVTRKPNGKLEIGVHIADVTRFVAADGPLDREARARATTVYLVHRRIDMLPALLASDLCSLHAGQDRLSVSAVWEAEEDG-EDIRLSKRADGSPVCWFGRTVIHSRASMTYDQAQMLVESGEIAKKRGHEEPPPGQAGRDVESSLQPGLAHDLRLLTRVASRTSRAERVKNGAIDLSQTGAELKFKIDPITGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQRTFPSSALVRVHASPDPSRLTAFEGVAARVGVDGNXXXXXXXXXXXXXXXXAKGLSECLASVEGGAL--QGEAGRSKAGLLKSLAVRAMSEAEYVSTGTLSDHQASGKGLEPESQGRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVCASTLPNPRHNHN-PTPLHTSGDGYNA---AHRGEEDG---ALPPSMAPSVMEMERAAVGKAEMDAA-ERRSGRAGAGDASFVTNPDGTRTYSKVS 3604
MGA+RIRETYLRGDRLL+SM+DTLLGE GG EG G S + T G EDSR KR RC SYVCPTADFL CYLELFDRP+F+ACFQR XXXXX LHSELSKLTGATGALSMKQERRL+Q+AR+LPGT+VFFDKFCPDLHGA+ G T G+ PS+ LA G A GTG GG+G PRV L LR+FL G+V G+A EELARRGDLLRR HL+ KAAT G SSPL +PHPSKTQLEALVA G A KGRLDVFEHNPKEG+VVVGAGGGA AL+GWTD +GR KVLV GREGMNRS+HGDTV VTLLPRRRWRA TDR RLTHAA EEEDIPL D G+APPGAMPTGFVVGV+EEGRRPYVVTIP EET GQGG+ATVAAVPMDPRVPKIRIKTRQLA+ISGQRLVV VDGWDVGH+FPFGHYVTSLGPVGEVSSEAAALLVEC SF PFSFNALASLPLVPNPPKESQKPRDAL PPATLA+RERPEDGFGKAPRWQDSGWRVQESDV GRRDLR ER +SVDPPGCQDIDDAMHV RKPNGKLEIGVHIADVTRFV AD PLDREARARATTVYLVHRRIDMLPALL+SDLCSLHAG+DRLSVS VWEAEEDG EDIRL K ADGSPVCWFGRTVIHS+ASMTYDQAQMLVE G I KK+GHEEPP GQAGRDV LQPGLAHDLRLLTR A RT+RAERV+NGAIDLSQ GAELKFKIDP+TGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQ FPS ALVRVHASPDPSRLTAFEGVAA+VGV+ A GLS+ LA+VEGGAL QGE G+SKAGLLKSLAVRAMSEAEYVSTGTLSDHQA GKGLE + + RFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGV + N H+ P P SGDG+NA A+RG++D ALP S+APSVMEME AAVG E DAA ERR RAGAGDASFV NPDGTRTYSK S
Sbjct: 1 MGAMRIRETYLRGDRLLVSMKDTLLGEGGG---EEGEGCSFQAT--GGGEDSRKHNKR----RC-SYVCPTADFLHCYLELFDRPNFSACFQRDGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHSELSKLTGATGALSMKQERRLSQLARSLPGTMVFFDKFCPDLHGASA-------------GATAGATDPGERS--------PSEALAVG-----------------------------------------------------------------GHARMGGTGAAGG--GGAGLPRV-LGLREFLRGYVGGDAEEELARRGDLLRRAHLSCKAATXXXXXXXXXXXTGTATTSSPLQKPHPSKTQLEALVASGAASKGRLDVFEHNPKEGVVVVGAGGGA---ALDGWTDASGRAKVLVAGREGMNRSMHGDTVAVTLLPRRRWRAPTDRKRLTHAAEEEEDIPLEEFQDAEGAGDG--------GEAPPGAMPTGFVVGVLEEGRRPYVVTIPSEETTGQGGTATVAAVPMDPRVPKIRIKTRQLAQISGQRLVVMVDGWDVGHVFPFGHYVTSLGPVGEVSSEAAALLVECEASFQPFSFNALASLPLVPNPPKESQKPRDALLPPATLAERERPEDGFGKAPRWQDSGWRVQESDVAGRRDLRKERAMSVDPPGCQDIDDAMHVKRKPNGKLEIGVHIADVTRFVEADSPLDREARARATTVYLVHRRIDMLPALLSSDLCSLHAGEDRLSVSVVWEAEEDGDEDIRLCKGADGSPVCWFGRTVIHSKASMTYDQAQMLVEDGRIEKKKGHEEPPSGQAGRDVREGLQPGLAHDLRLLTRFA-RTARAERVRNGAIDLSQAGAELKFKIDPVTGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSS------AGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLPSGDGFNAPPAANRGDDDEGVLALPSSLAPSVMEMEEAAVGMVEADAAAERRPRRAGAGDASFVINPDGTRTYSKAS 1060
BLAST of mRNA_P-littoralis_Contig158.56.11 vs. uniprot
Match: A0A6H5JSW4_9PHAE (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW4_9PHAE) HSP 1 Score: 1263 bits (3268), Expect = 0.000e+0 Identity = 834/1383 (60.30%), Postives = 912/1383 (65.94%), Query Frame = 2
Query: 1646 GFVVGVVEEGRRPYVVTIPPEETVGQGGSATVAAVPMDPRVPKIRIKTRQLAKISGQRLVVTVDGWDVGHMFPFGHYVTSLGPVGEVSSEAAALLVECRTSFHPFSFNALASLPLVPNPPK----------ESQKPRDALTPPATLAQRERPEDGFGKAPRWQDSGWRVQESDVVGRRDLRGERVVSVDPPGCQDIDDAMHVTRKPNGKLEIGVHIADVTRFVAADGPLDREARARATTVYLVHRRIDMLPALLASDLCSLHAGQDRLSVSAVWEAEEDG-EDIRLSKRADGSPVCWFGRTVIHSRASMTYDQAQMLVESGEIAKKRGHEEPPPGQAGRDVESSLQPGLAHDLRLLTRVASRTSRAERVKNGAIDLSQTGAELKFKIDPITGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQRTFPSSALVRVHASPDPSRLTAFEGVAARVGVDGNXXXXXXXXXXXXXXXXAKGLSECLASVEGGAL--QGEAGRSKAGLLKSLAVRAMSEAEYVSTGTLSDHQASGKGLEPESQGRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVCASTLPNPRHN-HNPTPLHTSGDGYN---AAHRGEEDG---ALPPSMAPSVMEMERAAVGKAEMDAA-ERRSGRAGAGDASFVTNPDGTRTYSKVSVSAPAITSDTA-------TSCAPPPPGMEAFPDLANPALGGDGDDLLDALLGLDVSGATAAAVAPQPPPSTTA--GEAEIGIDTHRTFSDVTGVXXXXXXXXXXXXXXXDDGD------SLLDALLGLDVETPAVTTMEDDTGGAGYGNDGVPFGGDADAAWLTSAEAKEKAAKGSNKWEGGGGGEVG--------DLAVASPPPFEGAELGTLCTHLNERNRNAKRLAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDKDGQVQVDPALLGLSASTGSQPSKAFATLPACRALPGASASLVSEP-GPPANASRRGDTSAAGGGSGRQGEKGE-EAVLEVRPPPGMGGKVLRLRALDGISLRLSCDVLPTQARLPKVRFLLAGVGNRPASRPGRTPPPPTTVNSSRPVTEGVRIELDPASKKPGGSAARLGEAPRRVGGG-VGRGLYWLLQGARDDAICTANVYLAGHGGSGVPHGPAAVAAAAAPEGLAAAELAAESFARRMAKKERKSTKA--------------------------------------GLSPTSPTQEQQRSEVGAGRALFGGFVPSRQAPAPSLYDFGS----SNSKQEGGRGGGAXSTSGGGFTDVSSLASIYSQA---GVVPGGAGXXXXXXXXGTLETLNDARVRQYTQEATTRAHRLGAEKRNSRISKSKRQG 5518
GFVVGV+EEGRRPYVVTIP EET GQGG+AT AAVPMDPRVPKIRIKTRQLA QRLVVTVDGWDVG +FP GHYVTSLGPVGEVSSEAAALLVEC SF PFSFNALASLPLVPNPPK ESQKPRDAL PPATLA+RERPEDGFGKAP RRDLR ER +SVDPPGCQDIDDAMHV RKPNGKLEIGVHIADVTRFV AD PLDREARARATTVYLVHRRIDMLPALL+SDLCSLHAG+DRLSVS VWEAEEDG EDIR+ K ADGS VCWFGRTVIHS+ASMTYDQAQMLVE G I KKR HEEPPPGQAGRDV LQPGLAHDLRLLTR A RT+RAERV+NGAIDLSQ GAELKFKIDP+TGTPLAVAG+EDSEIH TIAELMILANSAVAEKIQ FPS ALVRVHASPDPSRLTAFEGVAA+VGV+ A GLS+ LA+VEGGAL QGE G+SKAGLLKSLAVRAMSEAEYVSTGTLSDHQA GKGLE + RFGHFGLGLS YTHFTSPIRRYADIVVHRLLLASLGV + N H+ P P SGDG+N AA R E D ALP S+APSVMEME +A E DAA ERRS AGAGDASFV NPDGTRT+ S PPPPGME+FP+L P DGDDLLD+LLGL+VS +T A AP P S + ++ T +T S XXXXXXXXXXXXXXX SLLD+LLGL++ TT A +G + P G+ D +T+ GGGGG+ G D V + PPF GAELG LCTHLN+RNR AKRLAQRCQEMFLRL+FKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISD+DGQVQVDPALLGLSA G+ PSKAFATL ACRALPGA SLVS P +NA + GGG GR GE E E VLEVRPPPG GGKVLRLR LD +SL+ + Q R + G P++R R P V +S+ + E+ A + G +A R P+R GG + G + + + G+ T ++ + RSEVGAGRALFGGFVP R APA SLYDFG + S+Q GG GG GGF VSSL SIY+Q G+VP G G G LETL+DARVRQYTQEATTRA RLGAEKR+SRI+KSKRQG
Sbjct: 8 GFVVGVLEEGRRPYVVTIPSEETTGQGGTATAAAVPMDPRVPKIRIKTRQLA----QRLVVTVDGWDVGQVFPSGHYVTSLGPVGEVSSEAAALLVECEASFQPFSFNALASLPLVPNPPKVRRKRPVFSTESQKPRDALLPPATLAERERPEDGFGKAP----------------RRDLRRERAMSVDPPGCQDIDDAMHVKRKPNGKLEIGVHIADVTRFVEADSPLDREARARATTVYLVHRRIDMLPALLSSDLCSLHAGEDRLSVSVVWEAEEDGDEDIRICKGADGSRVCWFGRTVIHSKASMTYDQAQMLVEDGRIDKKRRHEEPPPGQAGRDVREGLQPGLAHDLRLLTRFA-RTARAERVRNGAIDLSQAGAELKFKIDPVTGTPLAVAGQEDSEIHDTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSS------AGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEGSRFGHFGLGLSLYTHFTSPIRRYADIVVHRLLLASLGVSVTRASNATHHITKPPPRLLSGDGFNVHPAAKREEVDEGVIALPSSLAPSVMEMEESADVNLETDAAAERRSRSAGAGDASFVINPDGTRTHXXXXXXXXXXXXXXXXXXXXXXASRLPPPPGMESFPELGGPD---DGDDLLDSLLGLEVSRSTTAKAAPAPAGSDSGFGSSGDVSGGTMKTKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLDSLLGLEI---GPTT-------ARHGGEATP--GEQDQDDITA--------------HGGGGGDAGEAFSPSARDNVVTASPPFGGAELGRLCTHLNDRNRRAKRLAQRCQEMFLRLYFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDRDGQVQVDPALLGLSAGAGNPPSKAFATLQACRALPGAGVSLVSTPRAGKSNAVSANCKAGRGGGPGRDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDSVSLQGDRKICAEQNE----RAIECG----PSTRCTRAAPCQEVVLASKSIQMVCGWEVGKAWGERG-AAVRDCCGPKRAGGHRMDEGGKVVAEEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXEGMDFTGCSKAR-RSEVGAGRALFGGFVPRRHAPAASLYDFGGKGQGAGSEQGGGETGGD-----GGFAGVSSLPSIYNQVVGRGLVPAGGG--------GVLETLDDARVRQYTQEATTRAQRLGAEKRSSRITKSKRQG 1311
BLAST of mRNA_P-littoralis_Contig158.56.11 vs. uniprot
Match: A0A836CJZ0_9STRA (DIS3-like exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ0_9STRA) HSP 1 Score: 515 bits (1327), Expect = 8.610e-159 Identity = 394/1015 (38.82%), Postives = 490/1015 (48.28%), Query Frame = 2
Query: 1754 MDPRVPKIRIKTRQLAKISGQRLVVTVDGWDVGHMFPFGHYVTSLGPVGEVSSEAAALLVECRTSFHPFSFNALASLPLVPNPPKESQKPRDALTPPATLAQRERPEDGFGKAPRWQDSGWRVQESDVVGRRDLRGE--RVVSVDPPGCQDIDDAMHVTRKPNG-----KLEIGVHIADVTRFVAADGPLDREARARATTVYLVHRRIDMLPALLASDLCSLHAGQDRLSVSAVWEAE--EDGEDIRLSKRADGSPVCWFGRTVIHSRASMTYDQAQMLVESGEIAKKRGHEEPP--PGQAGRDVESSLQPGLAHDLRLLTRVASRTSRAERVKNGAIDLSQTGAELKFKIDPITGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQRTFPSSALVRVHASPDPSRLTAFEGVAARVGVDGNXXXXXXXXXXXXXXXXAKGLSECLASVE---GGALQGEAGRSKAG-------LLKSLAVRAMSEAEYVSTGTLSDHQASGKGLEPESQGRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLAS--LGVCASTLPNPRHNHNPTPLHTSGDGYNAAHRGEEDGALPPSMAPSVMEMERAAVGKAEMDAAERRSGRAGAGDASFVTNPDGTRTYSKVSVSAPAITSDTATSCAPPPPGMEAFPDLANPALGGDGDDLLDALLGLDVSGATAAAVAPQPPPSTTAGEAEIGIDTHRTFSDVTGVXXXXXXXXXXXXXXXDDGDSLLDALLGLDVETPAVTTMEDDTGGAGYGNDGVPFGGDADAAWLTSAEAKEKAAKGSNKWEGGGGGEVGDLAVASPPPFEGAELGTLCTHLNERNRNAKRLAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDKDGQVQVDPALLGLSASTGSQPSKAFATLPACRALPGASASLVSEPGPPANASRRGDTSAAGGGSGRQGEKGEEAVLEVRPPPGMGGKVLRLRALDGISLRLSCDVLPTQARLPKVRFLLA 4729
MDPR P+I+++T QL+++ GQRL+V VD W+ G FP GHYV +LGP G+ +E AALL+E +F PFS ALA LP W+DSGW V E D R+DLRG RV SVDPPGCQDIDDAMHV R+ G +LE+GVHIADV RFVA PLDREAR R TT YL HRR DMLPALLA D+CSLH G+DRL+VS WE E EDG+ G P + VI S A+MTYDQA L+ G I+ ++PP PGQAG V L P L+ DL+LLT A R R +R ++GA+DL++ ELKFK+ P+TG P+AV K + EI+HTIAELMILAN VAE + R FPS+AL+R HA SRL + VAA G+ SVE GGALQ RS+A LLKSLA R MSEA YV TGTL +H A G G+ E R HFGLG+ YTHFTSPIRRYAD+VVHRLLLA+ LG A P+ A ++ A PP++A AG GD DGDDL+DALL ++G D XXXXXX GD ++VE +GV GGD V PF EL +C HLN R R AK+L+Q+CQE+FLRL F + +VV +V+SL++NGF+AY+PAFD KGPV+++DK G VQ+ P LL L A +G +P++ FA +P CRALP A LV + G P +E +EV + V + + L ++CDV P +ARLP +RF LA
Sbjct: 1 MDPRAPRIKLRTHQLSRLMGQRLLVQVDAWERGMRFPSGHYVRALGPAGDAETEVAALLLEHDAAFPPFSARALACLP----------------------------------RRGWRDSGWTVPEEDSTARKDLRGGGYRVFSVDPPGCQDIDDAMHV-REIGGSGMVRRLEVGVHIADVARFVAHGSPLDREARQRGTTTYLSHRRFDMLPALLAGDICSLHGGRDRLAVSVFWEVEQLEDGK---------GLPSQFGQNLVIRSVAAMTYDQAHTLITKGRIS-----DQPPVPPGQAGAPVPPDLHPPLSGDLKLLTLFA-RWLRQQRSESGALDLTKAEGELKFKLHPVTGLPVAVTAKAELEINHTIAELMILANRTVAETVLRAFPSAALLRTHAPVQASRLGLLQEVAAAAGI----------------------------SVEVGSGGALQASLERSQAARGAGVGALLKSLATRVMSEAVYVCTGTLDEHSAGG-GVTGE---RLSHFGLGIGSYTHFTSPIRRYADVVVHRLLLAATGLGYAAEAAPSADXXXXXXXXXXXXXXXETA----QEEAAPPALA-------------------------AGLGDL--------------------------------------------------DGDDLIDALL-------------------------DMGSDXXXXXX--------------XXXXXXXXGD--------VEVE------------------EGVEVGGDV-------------------------------AVVRKGAPFGTLELARVCEHLNSRTRGAKQLSQQCQELFLRLHFMNRVRVVDAVVMSLKANGFLAYIPAFDTKGPVFLADKSGVVQMAPQLLRLPADSGGEPAQGFAMIPNCRALP--HARLVLQEGTP-----------------------QELRVEVEKAAAVTFHVPMV-----VQLYVTCDVQPHKARLPDLRFGLA 728
BLAST of mRNA_P-littoralis_Contig158.56.11 vs. uniprot
Match: A0A5D6XKW3_9STRA (DIS3-like exonuclease 1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKW3_9STRA) HSP 1 Score: 442 bits (1136), Expect = 1.500e-125 Identity = 324/769 (42.13%), Postives = 416/769 (54.10%), Query Frame = 2
Query: 1109 EELARRGDLLRRMHLANKAATSASSGASRGEGDTR---ASSPLSRPHPSKTQLEALVAGGEALKGRLDVFEHNPKEGLVVVGAGGGAGAEALEGWTDVAGRMKVLVVGREGMNRSIHGDTVVVTLLPRRRWRAATDRMRLTHAAGEEEDIPLGLE--SDXXXXXXXXXXXXXXXGDAPPGAMPTGFVVGVVEEGRRPYVVTIPPEETVGQGGSATVAAVPMDPRVPKIRIKTRQLAKISGQRLVVTVDGWDVGHMFPFGHYVTSLGPVGEVSSEAAALLVECRTSFHPFSFNALASLPLVPNPPKESQKPRDALTPPATLAQRERPEDGFGKAPRWQDSGWRVQESDVVGRRDLR-GERVVSVDPPGCQDIDDAMHVTRKPNGKLEIGVHIADVTRFVAADGPLDREARARATTVYLVHRRIDMLPALLASDLCSLHAGQDRLSVSAVWEAEEDGEDIRLSKRADGSPVCWFGRTVIHSRASMTYDQAQMLVE-----------------SGEIAKKRGHEEPPPGQAGRDVESSLQPGLAHDLRLLTRVASRTSRAERVKNGAIDLSQTGAELKFKID--PITGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQRTFPSSALVRVHASPDPSRLTAFEGVAARVGVDGNXXXXXXXXXXXXXXXXAKGLSECLASVEGGALQGEAGRSKAGLLKSLAVRAMSEAEYVSTGTLSDHQASGKGLEPESQGRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGV 3340
+ AR GDLLR LA A + + A R D R ASS PH + ++L AL+A G AL+GRLDV HNP E VVVG A+E +V V GRE MNR +HGD VVV LLPR WRA L H +E + G + S XXXXXX GD+P +PTG+VVGV+ R +V T+ TVG G +A +PMD RVPK+RI+++++ + +RL V +D W + M+P GHYV+ LG G +S+E +ALLV+ PFS ALA LP + A P A A + W V +V RRDLR RV SVDPPGCQDIDDAM V R PNG +E+GVHIADV+ FVA PLD EAR+RATTVYLV R+DMLP++L+ DLCSLH DRL+VS VWE DG+ + + +GS WFGRT+I S ASMTY+QA +++ + ++ E PPG AG + LQ + DL LLT ++ + +RA R G +DLS+ E++F ++ + + + KE EIH TIAELMI+ANS VA +I FP++AL+R H P R +A + N L + L + E G LLKSLAVR MS+AEYV SD A + + F H+GLGL HYTHFTSPIRRYADI+VHR LLASL +
Sbjct: 248 QHFARDGDLLRE--LAFNTAEAVTWYAERNVADERGVVASSAEFAPHYAPSKLAALLATGAALRGRLDVSAHNPMEAFVVVGD---RTTSAVE---------RVFVYGREDMNRGVHGDEVVVELLPRADWRAPQSDRVLVHYTADESESDGGAKARSSKDGPGGXXXXXXNNSGDSPATGIPTGYVVGVLARSPRFHVATVL-SSTVGAGDDHGLA-IPMDNRVPKVRIRSQRMDALVDKRLKVVIDHWPLDSMYPSGHYVSVLGETGSLSTELSALLVQNDIEEAPFSEAALACLPECDIDGNRIAECSTAKRP-AVCALLD----------------WNVPAEEVAARRDLRVSHRVFSVDPPGCQDIDDAMSVRRLPNGNVELGVHIADVSYFVAHGSPLDFEARSRATTVYLVGMRLDMLPSVLSGDLCSLHENVDRLAVSVVWEL--DGQTLEI---VEGST--WFGRTLIRSCASMTYEQAHRMLQGLNADGGKALHDKNDRRARSLSSDAASSELPPGVAGGRIPLPLQKQIRDDLVLLTDISRKLARA-RGDQGGLDLSKH-EEVRFSLNVSELGEEGVEIIVKESLEIHSTIAELMIVANSWVARRIADVFPANALLRRHPPPSGDRFAQLVKLAQAKDIVINPANNYT-------------LQQSLVAAE---CSGRVDSKTMALLKSLAVRVMSQAEYVCA---SD--ADARSAANDDTTSFAHYGLGLQHYTHFTSPIRRYADIIVHRQLLASLEI 953
BLAST of mRNA_P-littoralis_Contig158.56.11 vs. uniprot
Match: D8LN42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN42_ECTSI) HSP 1 Score: 404 bits (1038), Expect = 3.450e-123 Identity = 279/547 (51.01%), Postives = 303/547 (55.39%), Query Frame = 2
Query: 3920 LLDALLGLDVETPAVTTMEDDTGGAGYGNDGVPFGGDADAAWLTSAEAKEKAAKGSNKWEGGGGGEVG--------DLAVASPPPFEGAELGTLCTHLNERNRNAKRLAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDKDGQVQVDPALLGLSASTGSQPSKAFATLPACRALPGASASLVSEPGPPANASRRGDTSAAGGGS--GRQGEKGE-EAVLEVRPPPGMGGKVLRLRALDGISLRLSCDVLPTQARLPKVRFLLAGVGNRPASRPGRTPPPPTTVNSSRPVTEGVRIELDPASKKPGGSAARLGEAPRRVGGGVGRGLYWLLQGARDDAICTANVYLAGHGGSGVPHGPAAVAAAAAPEGLAAAELAAESFARRMAKKERKSTKAGLSPTSPTQEQQRSEVGAGRALFGGFVPSRQAPAPSLYDFGSSNSKQEGGRGGGAXSTSGGGFTDVSSLASIYSQAG---VVPGGAGXXXXXXXXGTLETLNDARVRQYTQEATTRAHRLGAEKRNSRISKSKRQG 5518
+LDALLGL++ TT D G + P G+ D +T+ GGGGG+ G D VA PPF GAELG LCTHLN+RNR AKRLAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISD+DGQVQVDPALLGL A G+ PSKAFATLPACRALPGA SLVS P P ++ AGGG GR GE GE E VLEVRPP G GGKVLRLR LDG+SLRLSC+VLPTQARLPKVRFLLAGVGN PAS P TT ++ G R+E QRSEVGAGRALFGGFVP R APA SLYDFG +GGG GG F VSSL SIY+Q G +VP G G G LETL+DARVRQYTQEATTRA RLGAEKR+SRI+KSKRQG
Sbjct: 1 MLDALLGLEI---GPTTARD-------GGEATP--GEEDQDDITA--------------HGGGGGDTGEAFSMSARDDVVADSPPFGGAELGRLCTHLNDRNRRAKRLAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDRDGQVQVDPALLGLPAGAGNPPSKAFATLPACRALPGAGVSLVSTP-PAGKSNAVSAYYKAGGGXXXGRDGEGGEDEEVLEVRPPRGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGNHPASHSPAAAPTGTTATTTS--ARGTRLE-----------------------------------------------------------------------------------------------------------HQRSEVGAGRALFGGFVPRRHAPAASLYDFGGKGQGAGSEQGGGETGRDGG-FAGVSSLPSIYNQGGGRGLVPAGGG--------GVLETLDDARVRQYTQEATTRAQRLGAEKRSSRITKSKRQG 402
BLAST of mRNA_P-littoralis_Contig158.56.11 vs. uniprot
Match: A0A7S4R116_9STRA (DIS3-like exonuclease 1 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R116_9STRA) HSP 1 Score: 416 bits (1070), Expect = 1.800e-120 Identity = 343/1112 (30.85%), Postives = 474/1112 (42.63%), Query Frame = 2
Query: 1490 WRAATDRMRLTHAAGEEEDIPLGLESDXXXXXXXXXXXXXXXGDAPPGAMPTGFVVGV----VEEGRRPYVVTIPPEETVGQGGSATVAAVPMDPRVPKIRIKTRQLAKIS-GQRLVVTVDGWDVGHMFPFGHYVTSLGPVGEVSSEAAALLVECRTSFHPFSFNALASLPLVPNPPKESQKPRDALTPPATLAQRERPEDGFGKAPRWQDSGWRVQESDVVGRRDLRGE-RVVSVDPPGCQDIDDAMHVTRKPNGKLEIGVHIADVTRFVAADGPLDREARARATTVYLVHRRIDMLPALLASDLCSLHAGQDRLSVSAVWEAEEDGEDIRLSKRADGSPVCWFGRTVIHSRASMTYDQAQMLVESGEIAKKRGHEEPPPGQ---------AGRDVESSLQPGLAHDLRLLTRVASRTSRAERVKNGAIDLSQ--TGAELKFKIDPITGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQRTFPSSALVRVHASPDPSRLTAFEGV--AARVGVDGNXXXXXXXXXXXXXXXXAKGLSECLASVEGGALQGEAGRSKAGLLKSLAVRAMSEAEYVSTGTLSDHQASGKGLEPESQGRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVCASTLPNPRHNHNPTPLHTSGDGYNAAHRGEEDGALPPSMAPSVMEMERAAVGKAEMDAAERRSGRAGAGDASFVTNPDGTRTYSKVSVSAPAITSDTATSCAPPPPGMEAFPDLANPALGGDGDDLLDALLGLDVSGATAAAVAPQPPPSTTAGEAEIGIDTHRTFSDVTGVXXXXXXXXXXXXXXXDDGDSLLDALLGLDVETPAVTTMEDDTGGAGYGNDGVPFGGDADAAWLTSAEAKEKAAKGSNKWEGGGGGEVGDLAVASPPPFEGAELGTLCTHLNERNRNAKRLAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDKDGQVQVDPALLGLSASTGSQPSKAFATLPACRALPGASASLVSEPGPPANASRRGDTSAAGGGSGRQGEKGEEAVLEVRPPPGMGGKVLRLRALDGISLRLSCDVLPTQARLPKVRFLLAGVGNRPASRPGRT 4768
W R RL H + +EE+ L E +PT V+G+ R Y+VT PP +G + VPMD R+PKIR++++ + + G RLVV VD W+V ++P GH+V LG +G++ +E + LL+E S PFS A + LP + W + DV RRDLR + SVDPPGCQDIDD MH PNG +E+GVHIADV+ FV LDREA R TT YLV RR DMLP++L+SDLCSLH DRL+VS +W D + ++ + WFGR++IH+ A+MTY QA ++ H +PP AG V++ L P L DL +LT++A + GA+DLS G+ELKF +D G P V K + EIHHTIAELMI+AN VA KI FPSS+L+R H + + +R E A V DG A+ L + AS + GA+ L +SLA RAMSEA+YV TG+ E+ H+GLG+ YTHFTSPIRRYAD+VVHRLLLA+ V + + A V A +D R+ + + PD S + + D G+E + + +GDDLLD LL +++G+D DDG + LD T DD E KE K S+ A P+ AE+ +C +N +NR +K + CQ +FL L+F+ ++ V +V+ LR+NG + YVP +D KGPV++SDKDG VQ+ P+++GL + G P+ FA + C+ P S + + + L+V P G R LD I ++LSCD AR+P R L G +P + GRT
Sbjct: 1 WMVPVGRKRLIHVSSDEEEDNLTKEEKAANAKE---------------VVPTAKVIGLHPSSPSHNRTRYIVTAPPTSKTNEGA---ILVVPMDIRIPKIRLRSKLSSDVLVGTRLVVEVDDWEVDSVYPNGHFVECLGKIGDLETEISCLLLEHDVSLTPFSAKAKSILP--------------------------------------SSNNWSITPEDVSTRRDLRSNCTIFSVDPPGCQDIDDTMHAKVLPNGDIEVGVHIADVSHFVPHHSALDREAMIRGTTFYLVDRRFDMLPSILSSDLCSLHGQVDRLAVSVIWVLSPDLKTVKST---------WFGRSIIHNVAAMTYQQAHNIL----------HNKPPDXXXXXXXXXLTAGSPVDTKLIPSLKKDLTILTKLARILRKNREEIGGAVDLSSGDRGSELKFSLDE-NGLPTKVVAKTEMEIHHTIAELMIMANGHVASKIHGHFPSSSLLRNHRTVEQNRFEDLESAFKAGGVSFDGRSNMAL-----------AESLRQAKASGKDGAVIDS-------LFQSLATRAMSEAQYVCTGS------------KEASVGLSHYGLGIEKYTHFTSPIRRYADVVVHRLLLAA----------------------------------------------VTKKDDADVRMASLDVGVNRN--------ALESIPD--------SAAMSVLAGD----------GLEGG-EQKEQSDELEGDDLLDFLL---------------------EETSQLGLD-----------------------GDDDDGSNKLDE------------TKADD-------------------------ETKETDGKSSH---------------AEADPYSTAEVTKICEGINHQNRISKLCSMSCQRLFLSLYFRGNTDVAPAVVIGLRANGLLVYVPKYDMKGPVFLSDKDGNVQIHPSVMGLPSKAGLPPTSGFAIVDGCKRFPDGSCDICNA------------------------DDEANKYLQVIVPAGSSSVHCDFRLLDVIEVQLSCDTSDVVARIPPTRLHLISKGKKP--KIGRT 811
BLAST of mRNA_P-littoralis_Contig158.56.11 vs. uniprot
Match: A0A662YGG3_9STRA (DIS3-like exonuclease 1 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGG3_9STRA) HSP 1 Score: 416 bits (1068), Expect = 9.950e-117 Identity = 292/734 (39.78%), Postives = 397/734 (54.09%), Query Frame = 2
Query: 1199 EGDTRASSPLSRPHPSKTQLEALV--AGGEALKGRLDVFEHNPKEGLVVVGAGGGAGAEALEGWTDVAGRMKVLVVGREGMNRSIHGDTVVVTLLPRRRWRAATDRMRLTHAAGEEEDIPLGLESDXXXXXXXXXXXXXXXGDAPPGAMPTGFVVGVVEEGRRPYVVTIPPEETVGQGGSATVAAVPMDPRVPKIRIKTRQLAKISGQRLVVTVDGWDVGHMFPFGHYVTSLGPVGEVSSEAAALLVECRTSFHPFSFNALASLPLVPNPPKESQKPRDALTPPATLAQRERPEDGFGKAPRWQDSGWRVQESDVVGRRDLRG-ERVVSVDPPGCQDIDDAMHVTRKPNGKLEIGVHIADVTRFVAADGPLDREARARATTVYLVHRRIDMLPALLASDLCSLHAGQDRLSVSAVWEAEEDGEDIRLSKRADGSPVCWFGRTVIHSRASMTYDQAQMLVES----GEIAKKRGHE--------EPPPGQAGRDVESSLQPGLAHDLRLLTRVASRTSRAERVKNGAIDLSQTGAELKFKID--PITGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQRTFPSSALVRVHASPDPSRLTAFEGVA-AR-VGVDGNXXXXXXXXXXXXXXXXAKGLSECLASVEGGALQGEAGRSKAGLLKSLAVRAMSEAEYVSTGTLS--DHQASGKGLEPESQGRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLG 3337
EG+ S PH +TQL+ L+ L G+L+V +NP E V+V GA + A+E KVLV GR MNR +HGD V V +LP+ +WRA L H +E G+E GA+PTG VVG++ R +V T+ G AVPMD R+PKIR+++++L + QRL V +D W + +P GHYV LG G + +E +ALLV+ PFS ALA LP P + +K + + A + +RP+ R++ W++ E ++ RRDLR RV SVDP GCQDIDDAM V R PNG +E+GVHIADV+ FV PLD E R R TTVYLV +R+DMLP++L++DLCSLH +DRL+VS +WE + ++ S WFGRTVI S +SMTY+QA L++ ++A +RG E P G AG + +Q G+ DLR+LT VA R +R R + G +DLS+ E++F ++ + + + KE EIH TIAELMILANS VA ++ FP+ AL+R H P R + +A AR V +D L + LA+ E G LLKSLAVR M+EAEYVS+G ++ D A+ + P F H+GLGL YTHFTSPIRRYAD++VHR LLA++
Sbjct: 291 EGNVAGSQSEFAPHLLRTQLQELMDQPSPRVLAGKLEVNAYNPMEAFVLVE---GARSMAIE---------KVLVFGRAAMNRGVHGDRVAVEMLPKTQWRAPQSDRMLVHYTQDEVQDQGGVEDVEAEEKAQVEET---------GALPTGQVVGILSRSPRYHVATVLASSV--SAGDDYALAVPMDLRLPKIRLRSQRLDVLLDQRLKVVIDNWAADNSYPNGHYVGVLGAPGSLQTELSALLVDNEVEEAPFSEGALACLPSSDECPIDLEK--NCV---AECSTAKRPD-------RYELLDWQMPEDELRRRRDLRTTHRVFSVDPRGCQDIDDAMSVRRLPNGNVELGVHIADVSYFVEHGSPLDLEGRRRGTTVYLVGQRLDMLPSVLSADLCSLHENRDRLAVSVMWELDAATYEVVES-------ATWFGRTVIRSCSSMTYEQAHRLLQGFNADADVAPRRGEAVNPQAAIVEHPEGVAGGRIPVEMQRGVREDLRVLTDVAHRLART-RAEQGGLDLSKH-EEVRFSLNVTELGAEDVEIMVKESLEIHGTIAELMILANSTVARRLVERFPTHALLRRHPPPSGDRFSQLVQLAKARDVVIDATSNFT---------------LQQSLAAAE---RSGRMDSKTMSLLKSLAVRVMTEAEYVSSGAVAAADAAAANGDVTP-----FAHYGLGLQFYTHFTSPIRRYADVIVHRQLLAAIA 957
BLAST of mRNA_P-littoralis_Contig158.56.11 vs. uniprot
Match: A0A2D4BNP4_PYTIN (DIS3-like exonuclease 1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNP4_PYTIN) HSP 1 Score: 419 bits (1077), Expect = 1.180e-116 Identity = 308/741 (41.57%), Postives = 397/741 (53.58%), Query Frame = 2
Query: 1235 PHPSKTQLEALVAGGEALKGRLDVFEHNPKEGLVVVGAGGGAGAEAL-EGWTDVAGRMKVLVVGREGMNRSIHGDTVVVTLLPRRRWRAATDRMRLTHAAGEEEDIPLGLESDXXXXXXXXXXXXXXXGDAPPGAMPTGFVVGVVEEGRRPYVVTIPPEETVGQGGSATVAAVPMDPRVPKIRIKTRQLAKISGQRLVVTVDGWDVGHMFPFGHYVTSLGPVGEVSSEAAALLVECRTSFHPFSFNALASLPLVPNPPKESQKPRDALTPPATLAQRERPEDGFGKAPRWQDSG---WRVQESDVVGRRDLRG-ERVVSVDPPGCQDIDDAMHVTRKPNGKLEIGVHIADVTRFVAADGPLDREARARATTVYLVHRRIDMLPALLASDLCSLHAGQDRLSVSAVWEAEEDGEDIRLSKRADGSPVCWFGRTVIHSRASMTYDQAQMLVES------------------------GEIAKKRGHEEPPP----GQAGRDVESSLQPGLAHDLRLLTRVASRTSRAERVKNGAIDLSQTGAELKFKIDPITGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQRTFPSSALVRVHASPDPSRLTAFEGVAARVGVDGNXXXXXXXXXXXXXXXXAKGLSECLASVEGGALQGEAGRSKAGLLKSLAVRAMSEAEYVSTGTLSDHQASGKGLEPESQG---RFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVCAS 3349
PH QL VA G+AL+G LDV H+P E V V G +G V +VLV+GR+ MNR +HGD VVV LLPR +WRA +L H A E+ +E XXXXXXXX + P A+PTG VVGV++ + ++V TV G +A +PMD R+PKIRI+++++ + QRL V +D W + ++P GHY LG GE+S+E +A+LV PF ALA LP D A LA E A R + + WRV E + RRDLR RV SVDPPGCQDIDDAM V R PNG +E+GVHIADV+ FV D LDRE R R TTVYLV +R+DMLPALL++DLCSLH DRL++S WE + D ++ G+P WFGRTVI S ASMTY+QA LV+ ++ +G P G AG V +LQ L DL+LLTR++ + ++A R ++G IDLS++ + + G + + KE EIH TIAELMILAN++VA+KI P+SAL+R H P SR+ + +A +D + L L E G A LLKSLAVR MSEAEYV AS E + G F H+GLGL +YTHFTSPIRRYAD++VHR LL +L + AS
Sbjct: 532 PHWPLAQLRDAVARGDALQGTLDVSAHHPMEAFVAVDRRASPGTTITSDGTAVVPAPERVLVLGRDAMNRGVHGDKVVVQLLPRAQWRAPRSDRQLVHYASEDT-----VEQAPEHEHELXXXXXXXXXEPPSDAVPTGVVVGVLQR-QSQFIVATVLASTVAAGDDIALA-IPMDVRLPKIRIRSQRMDALLDQRLKVVIDHWPIDSLYPSGHYTAVLGGTGELSTELSAILVRHDIDEAPFCEAALACLP-------------DLGLDVAALALAE-----CSTAKRPETTALVDWRVSEREAAQRRDLRATHRVFSVDPPGCQDIDDAMSVRRLPNGNIELGVHIADVSFFVEHDSALDREGRQRGTTVYLVGQRLDMLPALLSADLCSLHERVDRLAMSVFWELDGDSLEV-----VGGAPT-WFGRTVIRSCASMTYEQAHRLVQGINADRAERVGSFSSXXXXXXXXXXXXXSRVQGGLAPVSPSRRGVAGGPVPLALQQELREDLQLLTRISRKLAKA-RGEDGGIDLSRSET-FSLNVSEL-GEGVEIVMKESLEIHATIAELMILANASVAKKIVTALPASALLRRHPPPS-SRMAQAKDIA----IDASNNYT---------------LQRSLVHAE---RSGRADAKTMALLKSLAVRVMSEAEYVC--------ASAASAETDQNGDVTSFAHYGLGLQYYTHFTSPIRRYADVIVHRQLLDALAMEAS 1207
BLAST of mRNA_P-littoralis_Contig158.56.11 vs. uniprot
Match: A0A448Z1J3_9STRA (DIS3-like exonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1J3_9STRA) HSP 1 Score: 412 bits (1058), Expect = 4.770e-116 Identity = 351/1178 (29.80%), Postives = 500/1178 (42.44%), Query Frame = 2
Query: 1238 HPSKTQLEALVAGGEALKGRLDVFEHNPKEGLVVVGAGGGAGAEALEGWTDVAGRMKVLVVGREGMNRSIHGDTVVVTLLPRRRWRAATDRMRLTHAAGEEEDIPLGLESDXXXXXXXXXXXXXXXGDAPPGAMPTGFVVGVVEEGRRPYVVTIPPEETVGQGGSATVAAVPMDPRVPKIRIKTRQLAKISGQRLVVTVDGWDVGHMFPFGHYVTSLGPVGEVSSEAAALLVECRTSFHPFSFNALASLPLVPNPPKESQKPRDALTPPATLAQRERPEDGFGKAPRWQDSGWRVQESDVVGRRDLR-GERVVSVDPPGCQDIDDAMHVTRKPNGKLEIGVHIADVTRFVAADGPLDREARARATTVYLVHRRIDMLPALLASDLCSLHAGQDRLSVSAVWEAEEDGEDIRLSKRADGSPVCWFGRTVIHSRASMTYDQAQMLVESGEIAKKRGHEEPPPGQAGRDVESSLQPGLAHDLRLLTRVASRTSRAERVKNGAIDLSQ--TGAELKFKIDPITGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQRTFPSSALVRVHASPDPSRLTAFEGV--AARVGVDGNXXXXXXXXXXXXXXXXAKGLSECLASVEGGALQGEAGRSKAGLLKSLAVRAMSEAEYVSTGTLSDHQASGKGLEPESQGRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVCASTLPNPRHNHNPTPLHTSGDGYNAAHRGEEDGALPPSMAPSVMEMERAAVGKAEMDAAERRSGRAGAGDASFVTNPDGTRTYSKVSVSAPAITSDTATSCAPPPPGMEAFPDLANPALGGDGDDLLDALLGLDVSGATAAAVAPQPPPSTTAGEAEIGIDTHRTFSDVTGVXXXXXXXXXXXXXXXDDGDSLLDALLGLDVETPAVTTMEDDTGGAGYGNDGVPFGGDADAAWLTSAEAKEKAAKGSNKWEGGGGGEVGDLAVASPPPFEGAELGTLCTHLNERNRNAKRLAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDKDGQVQVDPALLGLSASTGSQPSKAFATLPACRALPGASASLVSEPGPPANASRRGDTSAAGGGSGRQGEKGEEAVLEVRPPPGMGGKVLRLRALDGISLRLSCDVLPTQARLPKVRFLLAGVGNRPASR 4756
H ++ +++ + +KGRL V + N KEG+V+ G +L + R NR+ H D VVV LP+ +W + + RL + D +++ DA P ++P+G VV + ++ RR +V T+ G + VPMD R+PKIRIKT + GQRL V VD W+VG +P GH V LGP+ + +E LL E + PFS ALA LP+ + W++ ++ R+DLR R+ SVDP GCQDIDD HV PNG +E+GVHIADVT F+ D PLD+EAR RATT YLV RR DMLP++L+SDLCSLH DRL+VS +W D + ++ W+GRTVI + +MTY+QA ++ + AG V S L DL +LT ++ + + GA+DLS +ELKF +D P+ V K+ EIH T+AELMI+ANS VA+ I FP+SAL+R+H S D SR + + A ++ DG+ L++ L E A S L +SLA RAMSEA+YVSTG + Q GL H+GLGL YTHFTSPIRRYAD+VVH LL +L + P G G A +LP S S+++ G+ DA +R+ A +S N D +P+ G D+L V + + LT+A G E+GD + ++ +C LN +NR AK + CQ +FL L+FKDH ++ Q +V +LRSNGF AY+P FD + P+Y+SD+DG VQ+DPALLGL ++G P+ FAT + R P + +L + E + LEV K ++ LD +++++ CD T++R+P+ R L + P +
Sbjct: 298 HWTEERIQEGLRNKTLIKGRLTVTKENIKEGVVLSSXGAEGDPSSL-----------FINQSRGYFNRAFHQDVVVVQTLPKTKWSSPLGKRRLMPTQSNDNDDLNFSDAENGVSQ-----------DASP-SVPSGRVVAIFKQSRRQFVATM---VDTPMGDESACLVVPMDVRIPKIRIKTNGWRRFLGQRLWVHVDHWEVGSSYPSGHCVELLGPIANLETEITCLLKENQIYLEPFSAAALACLPV-------------------------------------EGHDWKIPSHEISRRKDLRFTRRIFSVDPIGCQDIDDTFHVHMLPNGDIEVGVHIADVTHFLLRDSPLDKEARRRATTFYLVDRRFDMLPSVLSSDLCSLHGDVDRLAVSTIWVMSSDFKTVK---------DFWYGRTVIRNCQAMTYNQAHNILHNNPXXXXXXXXXXXL-TAGYPVNHSNLSXLREDLLILTELSRKLRKDREDIGGAVDLSSGDNSSELKFTLDE-NHNPVQVIPKKQLEIHQTVAELMIMANSWVAKTIFERFPTSALLRIHQSVDESRFEDLKDILDAGKISFDGSSNMK---------------LADSLKKAEKSCKTNSAVNS---LFQSLATRAMSEAQYVSTGQIGGEQ----GLS--------HYGLGLGKYTHFTSPIRRYADVVVHHQLLQTLTLKXDDFPLRA---------PPGFGRKALK------SLPESKTISIIQ------GEGIEDAKDRKK----ASTSSVTKNID-------------------------------------SPSSTGKASDIL------------------------------------------------------------------------------------------------VEY-----FSRLTTA-----------------GKELGDA-------YTNEKVSKICQTLNRQNRMAKLSSFECQGLFLSLYFKDHVEITQAVVTNLRSNGFWAYIPKFDFRAPIYLSDRDGVVQIDPALLGLKKTSGLDPTTGFATSKSTRRFPSGTCTLH--------------------------DSLEHSHLEVSLRETT--KTYKITILDVVTVKIFCDEWDTKSRVPRPRIHLIADSSEPKEK 1156
BLAST of mRNA_P-littoralis_Contig158.56.11 vs. uniprot
Match: A0A8K1FML7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FML7_PYTOL) HSP 1 Score: 411 bits (1057), Expect = 1.470e-115 Identity = 284/716 (39.66%), Postives = 376/716 (52.51%), Query Frame = 2
Query: 1235 PHPSKTQLEALVAGGEALKGRLDVFEHNPKEGLVVVGAGGGAGAEALEGWTDVAGRMKVLVVGREGMNRSIHGDTVVVTLLPRRRWRAATDRMRLTHAAGEEEDIPLGLESDXXXXXXXXXXXXXXXGDAPPGAMPTGFVVGVVEEGRRPYVVTIPPEETVGQGGSATVAAVPMDPRVPKIRIKTRQLAKISGQRLVVTVDGWDVGHMFPFGHYVTSLGPVGEVSSEAAALLVECRTSFHPFSFNALASLPLVPNPPKESQKPRDALTPPATLAQRERPEDGFGKAPRWQDSGWRVQESDVVGRRDLRG-ERVVSVDPPGCQDIDDAMHVTRKPNGKLEIGVHIADVTRFVAADGPLDREARARATTVYLVHRRIDMLPALLASDLCSLHAGQDRLSVSAVWEAEEDGEDIRLSKRADGSPVCWFGRTVIHSRASMTYDQAQMLVESGEI------AKKRGHEEPPP----GQAGRDVESSLQPGLAHDLRLLTRVASRTSRAERVKNGAIDLSQTGAELKFKIDPIT-GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQRTFPSSALVRVHASPDPSRLTAFEGVAAR--VGVDGNXXXXXXXXXXXXXXXXAKGLSECLASVEGGALQGEAGRSKAGLLKSLAVRAMSEAEYVSTGTLSDHQASGKGLEPESQGRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGV 3340
PH QLE LV GE LKG++DV HNP E V+V A+ +E KV V GRE MNR IHGD VV+ LLP+ WRA L H A +E+ S D +PTG VVGV+ + +V T+ TV G +A +PM+ R+PKIRI+++++ + +RL V +D W + M+P GHY LG G++++E +A+LV+ PF +ALA LP + Q+ A P W+V S++ RRDLR RV SVDP GCQDIDDAM V R NG LE+GVHIADV+ FV D LD E R+R TTVYLV +R+DMLPA+L++DLCSLH DR ++S +WE +I K W+GRT+I S ASMTYDQA +++ G +KK G G AG + LQ + DL LLT ++ R +R ER + G +DLS++ F ++ + G + + KE EIH TIAELMILANS VA+KI FPS+AL+R H P +R +A + +D + L + L + E G A LLKSLAVR MSEAEY+ S+ S G + F H+GLGL +YTHFTSPIRRYADI+VHR LLA++ +
Sbjct: 295 PHLPPQQLEELVQRGELLKGKIDVSTHNPMEAFVLVDKKSRGYAKEVE---------KVYVYGREAMNRGIHGDEVVIELLPKSEWRAPKSERLLVHYAADEQT------SGGDAAHGPAKAQADEEEDTSSSTVPTGIVVGVLRRSSQFFVATVL-SSTVAPGDDYALA-IPMEVRIPKIRIRSQRMDMLLDKRLKVVIDHWPIDSMYPNGHYTAVLGGTGDLTTEVSAILVQNEIEEAPFCESALACLPECDIDTYKIQECSTAKRPDFVPL-----------------LDWQVPASEIPKRRDLRATHRVFSVDPRGCQDIDDAMSVRRLENGNLELGVHIADVSYFVEHDSALDYEGRSRGTTVYLVGQRLDMLPAVLSADLCSLHENVDRFAMSVIWELNGKTLEIIEDKT-------WYGRTIIRSCASMTYDQAHRILQGGNADVTPSKSKKPGDNAASAPHRRGVAGGPIPPVLQGEMRGDLELLTMISRRLAR-ERGEEGGLDLSRSET---FSLNVLELGNGVEIVMKESMEIHSTIAELMILANSYVAKKIVTAFPSNALLRRHPPPSGARFDQLICIAQTKDILIDASDNYT---------------LQQSLVNAE---RSGRADAKTMALLKSLAVRVMSEAEYICANA-SEATTSQNGDKTS----FAHYGLGLQYYTHFTSPIRRYADIIVHRQLLAAIAL 942 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig158.56.11 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig158.56.11 >prot_P-littoralis_Contig158.56.11 ID=prot_P-littoralis_Contig158.56.11|Name=mRNA_P-littoralis_Contig158.56.11|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1818bp MDQLEDGEKSHASLLLGAAVSRGFVVRSGKQGARRGGMGAVRIRETYLRGback to top mRNA from alignment at P-littoralis_Contig158:231686..252191+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig158.56.11 ID=mRNA_P-littoralis_Contig158.56.11|Name=mRNA_P-littoralis_Contig158.56.11|organism=Pylaiella littoralis U1_48|type=mRNA|length=20506bp|location=Sequence derived from alignment at P-littoralis_Contig158:231686..252191+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig158:231686..252191+ >mRNA_P-littoralis_Contig158.56.11 ID=mRNA_P-littoralis_Contig158.56.11|Name=mRNA_P-littoralis_Contig158.56.11|organism=Pylaiella littoralis U1_48|type=CDS|length=5454bp|location=Sequence derived from alignment at P-littoralis_Contig158:231686..252191+ (Pylaiella littoralis U1_48)back to top |