prot_P-littoralis_Contig158.52.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig158.52.1
Unique Nameprot_P-littoralis_Contig158.52.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length99
Homology
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BLAST of mRNA_P-littoralis_Contig158.52.1 vs. uniprot
Match: D8LN47_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN47_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 1.540e-44
Identity = 76/99 (76.77%), Postives = 86/99 (86.87%), Query Frame = 0 
Query:    1 QLSVITSAVLERFEDRDFNPVMFRIYMLVLAFVLVVHFIACGYWFVSRANDPEFEGMWSPEHEYLDAGLYLQYSRALYFSLVITYGNDLRPDTHWEYIF 99
            QLSVI++AVL+RFEDRDFNP MFRIY+ V  FVLVVHFIACGYWFVSR  DPEFEG+W PE EYLDA LY +Y+RALYFSLVITYGNDL+P+   EY+F
Sbjct:  402 QLSVISTAVLQRFEDRDFNPSMFRIYIFVFTFVLVVHFIACGYWFVSRTTDPEFEGLWVPEQEYLDAALYKKYTRALYFSLVITYGNDLKPENDAEYVF 500
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BLAST of mRNA_P-littoralis_Contig158.52.1 vs. uniprot
Match: A0A6H5JMZ2_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ2_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 4.270e-34
Identity = 60/78 (76.92%), Postives = 67/78 (85.90%), Query Frame = 0 
Query:   22 MFRIYMLVLAFVLVVHFIACGYWFVSRANDPEFEGMWSPEHEYLDAGLYLQYSRALYFSLVITYGNDLRPDTHWEYIF 99
            MFRIYM V  FVLVVHFIACGYWFVSR  DPEFEG+W PE EYLDAGL+ +Y+RALYFSLVITYGNDL+P+   EY+F
Sbjct:    1 MFRIYMFVFTFVLVVHFIACGYWFVSRTTDPEFEGVWVPEQEYLDAGLFEKYTRALYFSLVITYGNDLKPENDVEYVF 78
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig158.52.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN47_ECTSI1.540e-4476.77Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5JMZ2_9PHAE4.270e-3476.92Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 2..99
e-value: 7.3E-7
score: 30.8
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 21..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig158contigP-littoralis_Contig158:208128..210560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig158.52.1mRNA_P-littoralis_Contig158.52.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig158 208128..210562 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig158.52.1 ID=prot_P-littoralis_Contig158.52.1|Name=mRNA_P-littoralis_Contig158.52.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=99bp
QLSVITSAVLERFEDRDFNPVMFRIYMLVLAFVLVVHFIACGYWFVSRAN
DPEFEGMWSPEHEYLDAGLYLQYSRALYFSLVITYGNDLRPDTHWEYIF
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