mRNA_P-littoralis_Contig158.48.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig158.48.1 vs. uniprot
Match: D8LN48_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN48_ECTSI) HSP 1 Score: 1232 bits (3187), Expect = 0.000e+0 Identity = 839/1554 (53.99%), Postives = 971/1554 (62.48%), Query Frame = 1
Query: 1 YELQYAVA-RRGVVNDDAAVWQTVEGDDKNTWDITARVDGFDRLTGKNHTVQDGWFTLALSRVYPKPSSLPDLRLVTAEIAWDDTWADMETKVQRALRESRHRQYSSWTAAVVRCDETEQRGGNHWAGGCPFLEYGGYTWHLRLSPPDDDNAPSSFEDFPVVTVVKETITAKWSGHGDQVTSQRYGKLGAGEGFGTDRDDDGSGNISGASTHLVDPFFCQRGSCMRSLEGLTEATPYLVRLRAYNRNGFGPWKASTTDMSL-QSAEGTPGISTDAVPFAPTLKPPRLSSSTSSSLTVFVDT---TGHAMAGAFEFEIQPY-DERNRGDTSQWTPVTRSATDAEKEKNGALYLSPLATATGLSPSTSYRFRVSGRYAHGIQTVSGISEVFTTGPGLPKIPPSAPVVDAASKTSSTLSVTWPSWAAAGDEDYVFEAQWEQLGTGYWREATKVAQDSGEWRATAEVLNPYSQHRFRVRAVNDVGAGEWSAASKWVRTEGNLSSEG--DQGNVGTDETAVPTSVMLSASGETNMPGHSNDFDYYHGVGAGGQVSLDGRGGDGGGGAAVIVSRVKGVPLPARTPFFFTGSPELYAVPRHSGVTSITLKLWGAGGGGVLTTAAAMEIYGENGTSNATQALGGGGGFLQVEVKVSPGETLEVLVGGGGGASYGEAXXXXXXXXXXXXXXXQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGGDGGSPAFDLAVVGTGGAGECLNGWCSASEMAAVSFEGDENWLTTGXXXXXXXKGGQRGNSGIFDLVDGGGGRQGAASSPQGGETSIPIVFKGTSSRTATPGRSLSGGVGANGARSGXXXXXXXXXXXXXXXXXXXXXXXXXSSYADIDALVAEKDPTSEWRQGGS-GLRAVEIGESWVEMEWERVADAVPGDEPVFYEV----EISEGYGSEDFHLSTTVDAFDSYNPVMSSRYPRVPGGAPPAVLRATLLGLSPSSEFNIRVAAVSRLGAGRPSVAFSFSTDALPANKWERVVPRSSSPE---RRGRGLSGPDLGKE-EVWDTDLSAIQVRYDSSFSNPPTEQRQKLPSPRSGHTLAVVAGKVYMFGGLSASSRCSSALVGSKALGDTPGGAAVEDCVSGD---AELWEYNPSLNMWTEILVN-GAVAPAARDGHTASVAGSKMIIFGGRGNASDSDTQGGLHTRTALLGDEWEIDLDLSQHVTAATNSSTAIREGAATFIPLIVERADTHRQETDVDMCVTDISVAVEIDHRCTGQLRLILYGPGPPPGDTSKPGNTPRAEPAVLFVGYNGTDGVSEDVDDFG----AAGGSSSSGGCGDGLVMMFKDSGNSGVWECCGKGSPFNGTFKAVDNLLVGRFLHMPAEGEWTLGLVDTTVDGSNGTVISWSLGVEMRPCDWRSALRWSNVTSSEGRSPPPRRTHHTAAVVDGGLYIAGGMGASGALSDLWRRGNASSSSTSKGWTLLT-GAGATLTSTGPMKAHGATTIVSPWGVLSLGGMRKGSGVGGTSDLWVLDPISKLWRSVSGEGDRRSMPSWPTGR 4584
YELQYAVA R G +D A W++ EG+ +TWDIT +VDGFDR G+ H V+DGWFTLALSR YPKPSSLPDL L T I W++TW DME KVQ+ LRESRH QYSSWTAAVVRCDETE+RGG HWAGGC FLEYGG+TWHLRLSPP D A ++ EDFPVVTV KETITAKWSG GDQV S+R+G G +D + T+L+DPFFCQRGSC R LEGL ATPYLVRLRAYNRNGFGPW +STTDMS+ + G GIST+ VP P K P+LSSST +SLTVFVDT TG A A+EFE+Q + D+ GDT++W PV+ T A+ + A+ PL TAT LSPS+SYRFR G Q +GTG + +Q+ EWRATAE L YSQHRFRVRAVN VGAGEWSAAS W RT+G+ S+ D ++ +P SV+LS SGE PGH+ DFDYYHG+G GG+VSLDG+GGDGG GAAVIVSR+ GVPLP+R+ FFFT LGGGGGFLQ EVKVSPGE LEVLVG XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RG DGGSPA D VV TGG GEC NGWCSASE AVS+EG ENW+TTG +GG G S +FD VDGGGGRQGA SSP+ GE+S+PIVF+GT SR ATPGRSL+GG+GANGAR XXXXXXXXXXXXXXXXXXXXXXXXXSS+AD AL + T+EW GG G+R VE+GESWVE+EW V AV G++P+FYE+ IS G P+++ PR R+G P+ + +T W R + + G G+ G G+ E D D + + K+ S GH V GS ALGDT GGA +DC+ GD AELWE+NPS ++WTE+LVN AP ARDGHTASV GSKM++FGGRGN SDSD Q G + TALL DEW IDLDLSQ +T +TN ST IREG FIPL+VE+ + R E DVDMCVTD+SVAVEIDH C QL+L LYGPGPPPGDTS G+ RAEPAVL +G G + DVD FG A G +S GGC DG+ + F+DS SGVWE C SP GTFKA D LLVGRFL MPAEGEWTLG++D VDGSNGTV WSL VE+RPCDWRSALRW NV+ G + PP R HTAAVVDGG +++GG G+ GALSDLWRRG ASS W +L G G L STGP HGA+ +VSPWG+LS+GGM G GV + +WVLDP+SK W SV G+G + S P GR
Sbjct: 53 YELQYAVAGRTGGSDDTIASWKSAEGNTHDTWDITIQVDGFDRSIGRKHMVEDGWFTLALSRAYPKPSSLPDLWLDTEPIGWNETWVDMEAKVQKTLRESRHPQYSSWTAAVVRCDETEERGGKHWAGGCRFLEYGGFTWHLRLSPPPGD-ASATREDFPVVTVTKETITAKWSGDGDQVVSERFGDHSQSGG------EDSAHEEDLGRTNLIDPFFCQRGSCERMLEGLAAATPYLVRLRAYNRNGFGPWMSSTTDMSVGTTGGGAAGISTNTVPVTPAPKAPKLSSSTPTSLTVFVDTASTTGAAEIEAYEFEVQRHEDDGYSGDTTRWIPVS---THADDNSDAAV---PLTTATELSPSSSYRFRYDG------------------------------------------------------------GQVVVMGTG------RGSQE--EWRATAEGLEAYSQHRFRVRAVNAVGAGEWSAASDWARTKGDPSTTAGVDGFEAEAVDSDIPASVLLSVSGEGQTPGHAKDFDYYHGIGVGGKVSLDGQGGDGGPGAAVIVSRIPGVPLPSRSSFFFT-------------------------------------------------VLGGGGGFLQAEVKVSPGEMLEVLVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGTDGGSPALDQMVVNTGGGGECQNGWCSASEADAVSYEGIENWVTTGGSGGSTVQGGLGGKSDVFDWVDGGGGRQGAVSSPRSGESSMPIVFRGTGSRPATPGRSLTGGIGANGARGXXXXXXXXXXXXXXXXXXXXXXXXXXSSHADTGALALDHR-TNEWGSGGEDGVRVVEVGESWVEVEWRAVVGAVAGEQPMFYEIGDRNSISRG-------------------PLLNECTPR------------------------------QRMGMDHPTPLLAGAT-------WARTHGSRTREDWFMGHGSGVYGGRGGRIIESPDRDEAGASLA--------------KIGSHDGGHRRKV----------------------GSTALGDTAGGANTDDCMGGDSFSAELWEFNPSTSVWTEVLVNVDGNAPPARDGHTASVVGSKMVVFGGRGNGSDSDAQAGRGSNTALLEDEWAIDLDLSQLITISTNFSTNIREGGQIFIPLVVEQTEAQRAEADVDMCVTDLSVAVEIDHDCIQQLQLTLYGPGPPPGDTSPLGDVSRAEPAVLVLG-GGISDCASDVDLFGDGNDGAAGDASYGGCVDGMDVSFEDSAESGVWEGCNNRSPLRGTFKAADRLLVGRFLRMPAEGEWTLGVLDNAVDGSNGTVTRWSLDVEIRPCDWRSALRWINVS---GDARPPARARHTAAVVDGGRFVSGGTGSFGALSDLWRRGEASSE-----WMILAEGPGVPLASTGPYNPHGASIMVSPWGMLSIGGMLPGRGVESATGVWVLDPVSKRWHSVDGDGGVDA--SSPVGR 1372
BLAST of mRNA_P-littoralis_Contig158.48.1 vs. uniprot
Match: A0A6H5JMT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT4_9PHAE) HSP 1 Score: 498 bits (1281), Expect = 2.010e-157 Identity = 284/494 (57.49%), Postives = 326/494 (65.99%), Query Frame = 1
Query: 3181 RQKLPSPRSGHTLAVVAGKVYMFGGLSASSRCSSALVGSKALGDTPGGAAVEDCVSGDAELWEYNPSLNMWTEILVN-GAVAPAARDGHTASVAGSKMIIFGGRGNASDSDTQGGLHTRTALLGDEWEIDLDLSQHVTAATNSSTAIREGAATFIPLIVERADTHRQETDVDMCVTDISVAVEIDHRCTGQLRLILYGPGPPPGDTSKPGNTPRAEPAVLFVGYNGTDGVSEDVDDFG----AAGGSSSSGGCGDGLVMMFKDSGNSGVWECCGKGSPFNGTFKAVDNLLVGRFLHMPAEGEWTLGLVDTTVDGSNGTVISWSLGVEMRPCDWRSALR--------------------WSNVTSSEGRSPPPRRTHHTAAVVDGGLYIAGGMGASGALSDLWRRGNASSSSTSKGWTLLT-GAGATLTSTGPMKAHGATTIVSPWGVLSLGGMRKGSGVGGTSDLWVLDPISKLWRSVSGEGDRRSMPSWPTGR 4584
RQ+LPSPRSGHT+ V+AGKV G +S+ C AELWE+NPS ++WTE+LVN AP ARDGHTASVAGSKMI+FGGRGN SDSDTQ G + TALL DEWEIDLDLSQ +T +TNSST IREG TFIPL+VE+ + R E DVDMCVTD+SVAVEIDH C QL+L LYGPGPPPGDTS+ G+ RAEPAVL +G D + DVD FG A G S GGC D + + F+DS SGVWE C GTFKA D LLVGRFL MPAEGEWTLG++D VDGSNGTV WSL VE+RPCDWRSALR W NVT G + PP R HTAAVVDGGL+++GG G+ GALSDLWRRG ASS W +L G G L STGP HGA+ +VSPWGVLS+GGM G GV S +WVLDP+SK WRSV+ +G + S P GR
Sbjct: 2 RQELPSPRSGHTMVVIAGKV----GPGSSTEC--------------------------AELWEFNPSTSVWTEVLVNIDGDAPPARDGHTASVAGSKMIVFGGRGNKSDSDTQAGRGSNTALLQDEWEIDLDLSQLITMSTNSSTNIREGGQTFIPLVVEQTEAQRAEADVDMCVTDLSVAVEIDHDCIRQLQLTLYGPGPPPGDTSRLGDVSRAEPAVLVLGGGIAD-CASDVDLFGDGIDGAAGDVSYGGCVDRMDVSFEDSAESGVWEGCNNR---RGTFKAADRLLVGRFLRMPAEGEWTLGVLDNAVDGSNGTVSRWSLDVEIRPCDWRSALRSLGTRRPPCATVRAFARLRRWINVT---GDARPPARARHTAAVVDGGLFVSGGTGSFGALSDLWRRGEASSE-----WMILAEGPGVPLASTGPFNPHGASIMVSPWGVLSIGGMLPGRGVESASGVWVLDPVSKRWRSVNRDGGVDA--SSPVGR 451
BLAST of mRNA_P-littoralis_Contig158.48.1 vs. uniprot
Match: A0A6H5JSC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC5_9PHAE) HSP 1 Score: 368 bits (944), Expect = 1.450e-108 Identity = 252/597 (42.21%), Postives = 298/597 (49.92%), Query Frame = 1
Query: 1 YELQYAVARRGVVNDDA-AVWQTVEGDDKNTWDITARVDGFDRLTGKNHTVQDGWFTLALSRVYPKPSSLPDLRLVTAEIAWDDTWADMETKVQRALRESRHRQYSSWTAAVVRCDETEQRGGNHWAGGCPFLEYGGYTWHLRLSPPDDDNAPSSFEDFPVVTVVKETITAKWSGHGDQVTSQRYGKLGAGEGFGTDRDDDGSGNISGASTHLVDPFFCQRGSCMRSLEGLTEATPYLVRLRAYNRNGFGPWKASTTDMSLQSAEGTPGISTDAVPFAPTLKPPRLSSSTSSSLTVFVDTTGHAMAG------------------------------------------------------------------AFEFEIQPY-DERNRGDTSQWTPVTRSATDAEKEKNGALYLSPLATATGLSPSTSYRFRVSGRYAHGIQTVSGISEVFTTGP---------------------------GLPKIPPS---------APVVDAASKTSSTLSVTWPSWAAAG---DEDYVFEAQWEQLGTGYWREATKVAQDSGEWRATAEVLNPYSQHRFRVRAVNDVGAGEWSAASKWVRTEG 1470
YELQYAVA R +DD A W++ EG+ +TWDIT +VDGFDR G+ H V+DGWFTLALSR YPKPSSLPDL L T I WDDTWADME KVQ+ LRESRH QYSSWT AVVRCDETE+RGGNHWAGGC FLEYGG+TWHLRLSPP D A ++ EDFPVVTV KETITAKWSG GDQ MS+ + G GIST+ VP P+ K P+LSSST +SLTVFVDT A A A+EFE+Q + D+ RGDT++W PV T A+ + A+ PLATAT LSP +SYRFRV R+++G+ VSG+SE FTTG G+ ++ AP V+ T++TL+V A G D Q +GTG + +Q+ +WRATAE L YSQHRFRVRAVN VGAGEWSAAS W RTEG
Sbjct: 47 YELQYAVAGRSGGSDDTFANWKSAEGNTHDTWDITIQVDGFDRSIGRRHMVEDGWFTLALSRAYPKPSSLPDLWLDTEPIGWDDTWADMEAKVQKTLRESRHPQYSSWTVAVVRCDETEERGGNHWAGGCRFLEYGGFTWHLRLSPPPGD-ASATREDFPVVTVTKETITAKWSGDGDQ-------------------------------------------------------------------------------MSVGTTGGAAGISTNTVPVTPSPKAPKLSSSTPTSLTVFVDTASTAGAAEIEGKKRIISDISGGIPNTDRTRERNCHVSLGLFHFPRLPCFETVWPTPLLWFRFYRLASAVRTSQAYEFEVQRHEDDGYRGDTTRWIPVL---THADDNSDAAV---PLATATELSPFSSYRFRVRARHSNGLSLVSGVSEPFTTGKINVEHTKNGFTLALKQVVKGRRQMFHDGVSELSKERVHLCVLFVAPRVNLRPGTANTLAVG----AYCGRDVDNSQHDGGQVVVMGTG------RGSQE--DWRATAEGLEAYSQHRFRVRAVNAVGAGEWSAASDWARTEG 545
BLAST of mRNA_P-littoralis_Contig158.48.1 vs. uniprot
Match: A0A7S2S9P4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9P4_9STRA) HSP 1 Score: 234 bits (598), Expect = 1.630e-61 Identity = 222/733 (30.29%), Postives = 312/733 (42.56%), Query Frame = 1
Query: 3070 GRGLSGPDLGK-------EEVWDTDLSAIQVRYDSSFSNPPTEQRQKLPSPRSGHTLAVVAGKVYMFGGLSASSRCSSALVGSKALGDTPGGAAVEDCV--SGDA-ELWEYNPSLNMWTEILVNG-------------AVAPAARDGHTASVAGSKMIIFGGRGNASDSDTQGGLHTRTALLGDEWEIDL------------DLSQHVTAATNSSTAIREGAATFIPLIV--------ERADTHRQETDVDMCVTDISVAVEIDHRCTGQLRLILYGPGPPPGDTSKPGNTPR--AEPAVLFVGYNGTDGVSEDVDDFGAAGGSSSSGGCGDGLV-MMFKDSGNSGVWECCGKGSPFNGTFKAVDNLLVGRFLHMPAEGEWTLGLVDTTVDGSNGTVISWSLGVEMRPCDWRSALRWSNVTSSEGRSP-PPRRTHHTAAVVDGGLYIAGGMGASGALSDLWRRGNASSSSTSKGW-TLLTGAGATLTSTGPMKAHGATTIVSPWGVLSLGGMRKGSGVGGTSDL----WVLDPISKLWRSV-------------------SGEGDRRSMPSWPT-----GRYLSAVAIVKEAQDGHM-----IDTAADSVGRLVLFGGKDDWRRLDDLWLLGLRSLNVTTSQQQRSIRTQARPATGMGDIGTASLRPLAVGSWPLAEAGRYQRCAHFSVAGTANDTWHASCGEGADDDGGDGSCTMAAVLEMAWCLGEYQGVG 5025
G GL+ P LG+ E+ W ++ S +P ++ + PSPR GHTLAVV G +Y+FGGLS CS L S+ G G V C G++ ELW YNP ++ W E+ V +V P +R+ H+AS KMI++GG D H LGD WE+D+ ++ V N S +I +G FI V E A T+R+ + +C+ D+ V VE+ H CT Q+ L+LYGPGP P+ A+ LF ++GT +D GCG LV + F D V ECC SPF G+F+ V+ L F +PA GEWTL D D +G++ + L + CD W + E P PP R H A V ++I GG G L DLWR S + W L + L +T A G + ++SPWG+L+LGG+ S G S L +LD + WR+V S G + P+ GRYLSA ++ E ++ + D+ L FGG D R DD+ L L +L+ T ++++ Q R A +G A+ + G W CA + A T +G CT+ VL+ AWCL EYQG G
Sbjct: 7 GYGLAAPVLGRPHASPGTEDPWTLEVGG--TNDSSRVFDPNSQSTEVSPSPRRGHTLAVVLGNIYLFGGLSEGYDCSLGLTDSRRFGSPNAGLDVSVCRLRKGESNELWAYNPVMDQWRELQVGRGRFYHATPEGPGQSVRPPSREMHSASTVDDKMIVYGGVRYGDD-------HVAPEYLGDVWELDVGRRNYGFSVASTEVGGGVGGGRNRSVSIPQGGHVFIEAEVNSSTISFEEPAPTYRRAEE--LCIVDLEVEVELQHPCTRQVELVLYGPGP---SAHSANYFPQFHAQAVKLFQHHDGT----KDA-------------GCGVDLVGLTFDDDAEPSVRECCH--SPFTGSFRPVEPL--HAFHGVPALGEWTLSAYDRDPDDLSGSISHFKLNFRVTECD--QTFHWREL---EVAGPAPPLRAQHAAITVGESVFIFGGHN-DGILDDLWRLDLGS-----RTWHALASNHRDNLAAT----AVGRSLVLSPWGLLALGGLSGRSIDDGQSALDTSVRLLDLWTHRWRTVETGTDTSLDAEPHRHRGSGSLSGKGHAFPALEERVPVQGRYLSAAVLLGERPGKYLDAKGLYEVGTDAWPALYTFGGYDGSRTFDDIRRLSLHALD--TEEEEKDPVAQLRAARCEWVLG-ANTTTESRGDWE-------DTCAAENTAAT------------------NGQCTLRQVLQRAWCLEEYQGFG 661
BLAST of mRNA_P-littoralis_Contig158.48.1 vs. uniprot
Match: A0A7S2G1M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1M0_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.260e-51 Identity = 146/421 (34.68%), Postives = 208/421 (49.41%), Query Frame = 1
Query: 3142 RYDSS-FSNPPTEQRQKLPSPRSGHTLAVVAGKVYMFGGLSASSRCSSALVGSKALGDTPGGAAVEDC--VSGDA-ELWEYNPSLNMWTEILVNGAVAPAARDGHTASVAGSKMIIFGGR------GNASDSDTQGGLHTRTALLGDEWEIDLDLSQHVTAATNSS--TAIREGAATFIPLIVERA-----------DTHRQETDVDMCVTDISVAVEIDHRCTGQLRLILYGPGPPPGDTS-KPGNTPRAEPAVLFVGYNGTDGVSEDVDDFGAAGGSSSSGGCGDGLV-MMFKDSGNSGVWECCGKGSPFNGTFKAVDNLLVGRFLHMPAEGEWTLGLVDTTVDGSNGTVISWSLGVEMRPCDWRSALRWSNV-TSSEGRSPPPRRTHHTAAVVDGGLYIAGGMGASGA----LSDLWR 4314
R DS S+PPT RQ PSPR GH+L+V+ G VY+FGGL+ C+SA+ S G G +VE C +S ++ E+W Y+P NMW ++L + A +P AR+ H K+I+FGG G+ D G L D WE+D+ + + T+ I EG F+ + V R + E +C+ DI V+VE+ H CT Q++L+LYGPGP D + +P A P VLF ++GT G ++GGCG L F D + GV E K F+G+F+ + L + ++ G+W LG+ D DG G V +W++ + MR CD W+ + TS P R A VVDG +++ GGM SGA LSDLWR
Sbjct: 16 RNDSDRLSDPPTGDRQVAPSPRRGHSLSVIYGHVYLFGGLTEGYDCNSAITDSLRYGSPYAGLSVEQCRALSDESNEVWRYSPVPNMWEKVLPSTA-SPPAREQHFGVTLDDKLIVFGGMCYVKGSGDEDDDAVVDGTAGTPEYLDDMWELDVGRLSYTHSITSEEYDMVIPEGGQAFMTMDVNRTGLKAGDGEGLGSSQGSEIADGLCIADIDVSVELRHPCTRQVQLVLYGPGPNDYDANFEP--PAHAYPTVLFNYHDGT--------------GGRTAGGCGRNLEGTTFDDDADVGVHEA--KSPGFDGSFRPFEKL--STYHNLRPHGQWALGVYDRDTDGLTGVVSNWTIHLTMRECD--QTYHWTELATSVAAADRPSARARPAAVVVDGSIFMYGGM--SGAPRTVLSDLWR 411
BLAST of mRNA_P-littoralis_Contig158.48.1 vs. uniprot
Match: A0A7S2G7W4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7W4_9STRA) HSP 1 Score: 190 bits (482), Expect = 1.540e-46 Identity = 197/712 (27.67%), Postives = 283/712 (39.75%), Query Frame = 1
Query: 3157 FSNPPTEQRQKLPSPRSGHTLAVVAGKVYMFGGLSASSRCSSALVGSKALGDTPGGAAVEDCVSGD---AELWEYNPSLNMWTEILVN---GAVAPAARDGHTASVAGSKMIIFGGRGNASDSDTQGGLHTRTALLGDEWEIDLDLSQHVTAATNSSTAIREGAATFIPLIVE--RADTHRQETDVDMCVTDIS-----------------VAVEIDHRCTGQLRLILYGPGPPPGDTS-KPGNTPRAEPAVLFVGYNGTDGVSEDVD-DFGAAGGSSSSGGCGDGLV-MMFKDSGNSGVWECCGKGSPFNGTFKAVDNLLVGRFLHMPAEGEWTLGLVDTTVDGSNGTVISWSLGVEMRPCDWRSALRWSNV----TSSEGRSPPPR-RTHHTAAVVDGGLYIAGGMGASGALSDLWRRGNAS------SSSTSKGWTLLTGAG-----ATLTSTGPMKAH--------GATTIVSPWGVLSLGGMRKG---SGVGGTSDLWVLDPISKLWRSVSGEGDRRSMP--SWPTGRYLSAVAIVKEAQDGHMIDTAADSVGR-------------------------------LVLFGGKDDWRRLDDLWLLGLRSLNVTTSQQQRSIRTQARPATGMGDIGTASLRPLAVGSWPLAEAGRYQRCAHFSVAGTANDT-WHASCGEGADDDGGDGSCTMAAVLEMAWCLGEYQGVG 5025
F++ PT + PS R GH+L VV +YMFGGL CS+A+ + G G VE C +ELW Y+P N W +L P+ R+ H A K+I+FGG + +DT+ + A L D WE+D+ + + + T +G T +PL + R D D D V + V V + H CT QL+L LYGPGP D + +P + P VLF N DG+S D D G + S GCG L +F D + V PF+ + + + L F + + G+WTLG D T DG NGTV++W + PC+ +W + +SS SP P R H + VD L++ GG DLWR +S S +S G G G + P+ H G T +++PWGV++LGG R G +W+ D S+ WR+++ DRR+ + P AV + K + + + A VGR + FGG D R DDL +L L+ L Q + E R C H T + W+ C + +G CT+ VL+ AWC EY +G
Sbjct: 6 FTDSPTTDAEVFPSSRRGHSLTVVYDAIYMFGGLVDGYDCSAAVTDTTRYGSPYAGLEVEKCRGRSEVSSELWRYSPIYNQWAHLLSAPPYNFTQPSPREQHAAVELHDKIIVFGG---VAYNDTES---SSPAYLNDLWELDVGRLTYTASVNATPTDEDDGGGTRVPLAIPQGRQDFSTITVDQDHMVDSMDETVMXXXXXXXXXXXMEVMVHVRHPCTRQLQLTLYGPGPESWDANFEP--PAHSHPVVLF---NFHDGLSRSADGDMGVR--TPSFHGCGRHLRGTVFDDEASVSV-ASDNASPPFSDSLRPFEKL--STFKGVRSVGDWTLGAYDRTPDGLNGTVLTWGINFTYVPCE--QPFKWERLDPDASSSXXXSPQPEGRAHPSVVAVDDALFVYGGHAEFTLSQDLWRFDRSSLKWTQLHSHSSAGMDDEGGGGYSSPFSLFALMPPLHRHPINELESTGRTLVLTPWGVIALGGHRSGLLDQSSQAEQRVWLFDLWSEEWRAIT-TNDRRADKGHAHPLPHRHRAVGLEKSYEHPQLFEDAPQ-VGRYFGASTFIGGLAGEVVNGAGLTVPLSATLPAVYTFGGNDGVRNYDDLRMLTLQGLRYEEDQA-------------------------------VMERVRSDHCDHTLTRNTTDYADWNRRCYKRKTGTN-EGECTLLEVLQRAWCRKEYTAIG 665
BLAST of mRNA_P-littoralis_Contig158.48.1 vs. uniprot
Match: D0N9L9_PHYIT (Fibronectin type III domain-containing protein n=6 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N9L9_PHYIT) HSP 1 Score: 163 bits (412), Expect = 1.870e-36 Identity = 448/1743 (25.70%), Postives = 693/1743 (39.76%), Query Frame = 1
Query: 1 YELQYAVARRGVVNDDAAVWQTVEGDDKNTWDITARVDGFDRLTGKN--------HTVQDGWFTLALSRVYPKPSSL---PDLRLVTAEIAWDDTWADMETKVQRALRESRHRQYSSWTAAVVRCDETEQRGGNHWAGGCPFLEYGGYTWHLRLSPPDDDNAPSSFEDFPVVTVVKETITAKWSGHGDQVTSQRYGKLGAGEGFGTDRDDDGSGNISGASTHLVDPFFCQRGSCMRSLEGLTEATPYLVRLRAYNRN--GFGPWKASTTDMSLQSAEGTPGISTDAVPFAPTLKPPRLSSSTSSSLTVFVD-----TTGHAMAGAFEFEIQPYDERNRGDTS-QWTPVTRSATDAEKEKNGALYLSPLATATGLSPSTSYRFRVSGRYAHGIQTVSGISEVFTTGPGLPKIPPSAPVVDAASKTSSTLSVTWPSWAAAGD---EDYVFEAQWEQLGTGYWREATKVAQDSGEWRATAEV--LNPYSQHRFRVRAVNDVGAGEWSAASKWVRTEGNLSSEGDQGNVGTDETAVPTSVMLSASGETNMPGHSNDFDYYHGVGAGGQVSLDGRGGDGGG-----------GAAVIVSRVKGVPLPARTPFFFTGSPELYAVPRHSG-------VTSITLKLWGAGGGGVLTTAAAMEIYGENGTSNATQALGGGGGFLQVEVKVSPGETLEVLVGGGGGASYGEAXXXXXXXXXXXXXXXQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGGDGGSPAFDLAVVGTGGAGECLN----GWCSASEMAAVSFEGDENWLTTGXXXXXXXKGGQRGNSGIFDLVDGGG-------------------GRQGAAS-SPQGGETSIPIVFKGTSSRTATPGRSLSGGVGANGARSGXXXXXXXXXXXXXXXXXXXXXXXXXSSYADIDALVAEKDPTSEWRQGGSG--------------LRAVEIGESWVEMEWERVADAVPGDEPVFYEVEISEGYGSEDFHLSTTVDAFDSYNPVMSSRYPRVPGGAPPAVLRATLLGLSPSSEFNIRVAAVSRLGAGRPSVAFSFSTDALPANKWERVVPRSSSPERRGRGLSGPDLGKEEVWDTDLSAIQVRYDSSFSNPPTEQRQKLPSPRSGHTLAVVAGKVYMFGGLSASSRCSSALVGSKALGDTPGGAAVEDCVSGDAELWEYNPSLNMWTEILVNGAVAPAARDGHTASVAGSKMIIFGGRGN----ASDSDTQGGLHTRTALLGDEWEIDLDLSQHVTAATNSSTAIREGAATFIPLIVERADTHRQETDV---DMCVTDISVAVEIDHRCTGQLRLILYGPGPPPGDTSKPGNTPRAEPAVLFVGYNGTDGVSEDVDDFGAAGGSSSSGGCGDGL----VMMFKDSGNSGVWECCGKGSPFNGTFKAVDNL-LVGRFLHMPAEGEWTLGLVDTTVDGSNGTVISWSLGVEMRPCDWRSALRWSNVTSSEGRSPPPRRTHHTAAVVDGGLYIAGGM--GASGALSDLWR----RGNASSSSTSKGWTLLTGAGATLT-----STGPMKAH-GATTIVSPWGVLSLG-GMR--KGSGVGGTSDLWV-------------LDPISKLWRSV---SGEGDRRSMPSWPTGRYLSAVAIVKEAQDGHMIDTAADSVGRLVLFGGKDDWRRLDDLWLLGLRSLNVTTSQQQR------------SIRTQARPATGMGDIGTASLR 4824
YE+QYAV+ GV WQ++ GD + + + + + ++ DG+F L LS PS L +VT IA+D + M+T ++ T V + + G W + Y G + P++++ ET++A+W+G GDQV Q Y ++ + + G + C + GL + R+RA G+ W AS+ + + + TP VP AP+ P L ++T+S +T+ T + + F + + + + D+ WT ++ N +++ +A+ P ++ FRV+ A+G S S FTT L P + + A L+V W + G E+ ++ ++ W D A + L Y+ + RVRAV + AG +S +++++ + + E D + + + T ++ A+ +N D+Y+ V L G GG GG GA ++ PA FF+TGS + Y VP + ++ + WGAGG G ++ NG S+ + GGGG F + +VS G+ +++LVGGGG + XXXXXXX XXXXX XXXXXXXXXXXXXXXXXXXXXX E G LA T GA L+ G + E + + GD G +S + ++ GG +G +PQ + + T+S + GR+ ++GXXXXXXXXXXXXXXXXXXXXXXXXX S+ V+ +D + ++ G S LR + S V++ W+ P F ++ EG+ E + S D + V P L TL GL+P++ + RV A+ G G S + P N W R V R+ E G+ +N P QR PS R GH+L ++ +Y+FGG++ S CS A L +P VS D W Y+ W + A+ P+ R+ H+ +V ++I+FGGR N A+D+ T G L D WE L +S T+ S R+ +A IP + R+ +CV ++SV+V+I H C L L ++GPGP + PG R + A V + D + G + G V++ + EC + F + +L + F +P G WTL L DT DG GT+ SW + ++ PC A W+N++S + P R H+ VV ++I GG G LSDL+R R A + + WT L A+LT S + H G T+++P+ ++++G G++ + + +G + + L+ + WR+V SGE + P RY +A A V V R+ LFGG+DD LDDLW L L L+ Q +R S + P G GT+ LR
Sbjct: 92 YEVQYAVSGSGV-------WQSL-GDSLTGFRVDLGAQATEHVPKQRIFTRADDGESINDGYFRLGLSYEGSSPSILGGRATAGVVTPPIAFDASADAMKTAIESL---------EQVTQVQVERNALDADGAFEWIILFDLVAYDGE------------------DPLPLLSLYTETVSAQWTGDGDQVAVQ-YLRM--------------APSSPGRHRRICSD------ECSYQVTGLQTGRAFSFRVRAQYSYAIGWSSWSASSEPLEIPA---TP------VPRAPST--PELLAATTSHVTISWRMRRELTQENGIFAREFFPVTSFQAQQQCDSEIGWTTISERIPPGFSG-NSDTFVTVVASLDR-PPGSTCEFRVAATNANGQGPFSLPSAKFTT---LQTAPGAVANLRVA---RDPLTVVWNTPEVLGGHAPEELTYDVEYRTTLGSTWTRLPAELVDCSSRLANISMTSLKGYTTYVTRVRAVAERQAGSFSQSAEFLA---DYTVEDDSNSDNVKDLTLGTRQVVIAAARQQC---ANTQDWYY-------VQLTGNGGSGGSTSGDEAKPGEHGAVLVFPVTWSGERPAEHSFFYTGSVQTYRVPIDQSAPHLAHRIVALDVYAWGAGGAGARSS---------NGASSDL-SNGGGGAFARGVFRVSAGDAVDILVGGGG---LQDGRGGFNGGGXXXXXXXXXXXXXXASEVRVNGRTAVVXXXXXXXXXXXXXXXXXXXXXXLDEAESG---------LAPDATSGAAIPLDSRVTGQAARDEYHSSNVPGDTRDFEGLPARHGHLDWGFAASSADYSVLATGGTXXXXXXXXXXXXXGSYRYSLEGTCLLNPQTSLVDVAVSPL-TASHWPSNGRNGXXXXXXXXKQAGXXXXXXXXXXXXXXXXXXXXXXXXXXSF------VSFRDLFNSFKSGISDASLRARVSDEIVDKLRVTPLTSSSVKVSWKA---------PRFGFSQLVEGFVIEMANRSVNED----FRLVRLVTLPATDVTEKSGTL--TLHGLTPTAAYRFRVKALLFDGRGTFSDVVTLRMPTKPRNTWRRCVTRTVDEENTRAGMR------------------------VTNTPPLQR--FPSARRGHSLTLLDNSLYLFGGMAKSYECSRAHKVPCLLQPSP------RSVSND--FWRYDLRTETWWSVPPP-ALIPSPREKHSMAVVNDRLILFGGRQNDVSDANDASTWG-----PRALNDLWE--LSVSSSTAKQTSVSLDSRQPSALSIPDGGQVFALGRKSGSAGGEQLCVVNVSVSVQITHACPHTLGLQVFGPGP----ATFPG---RQQSAHFPVDSQARETTWSDSQGLRSLQGDKRATGTAPNARAFPVLLRSPDEAADKSECVPRTEKLQ--FVSTSSLEALSVFHQLPVAGNWTLELTDTAADGFVGTLDSWDVTFDVAPCV--PAFTWTNLSSIATGTAPTARFQHSVVVVGSSMFIFGGTAGGTGSELSDLYRLDYTRSVALGVAPTARWTQL----ASLTDRESPSIAERRVHAGRATLLTPFELMAVGRGLKSPRRASLGSRTAMAASRLESQLDVRLKRLEDLIDGWRAVATASGEDESALDEQRPVPRYWAASAFVSSLP--------GSKVPRVFLFGGQDDTTLLDDLWSLELAQLDEDFPQDRRKSQRIRAWASIESFNLERIPTFGGEQAGTSELR 1637
BLAST of mRNA_P-littoralis_Contig158.48.1 vs. uniprot
Match: D0P3B9_PHYIT (Fibronectin type III domain-containing protein n=2 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P3B9_PHYIT) HSP 1 Score: 158 bits (399), Expect = 5.060e-35 Identity = 179/659 (27.16%), Postives = 274/659 (41.58%), Query Frame = 1
Query: 2905 TLLGLSPSSEFNIRVAAVSRLGAGRPSVAFSFSTDALPANKWERVVPRSSSPERRGRGLSGPDLGKEEVWDTDLSAIQVRYDSSFSNPPTEQRQKLPSPRSGHTLAVVAGKVYMFGGLSASSRCSSALVGSKALGDTPGGAAVEDCVSGDAELWEYNPSLNMWTEILVNGAVAPAARDGHTASVAGSKMIIFGGRGN----ASDSDTQGGLHTRTALLGDEWEIDLDLSQHVTAATNSSTAIREGAATFIPLIVERADTHRQETDV---DMCVTDISVAVEIDHRCTGQLRLILYGPGPPPGDTSKPGNTPRAEPAVLFVGYNGTDGVSEDVDDFGAAGGSSSSGGCGDGLVMMFKDSGNSGVWECCGKGSPFNGTFKAVDNL-LVGRFLHMPAEGEWTLGLVDTTVDGSNGTVISWSLGVEMRPCDWRSALRWSNVTSSEGRSPPPRRTHHTAAVVDGGLYIAGGM--GASGALSDLWRRGNASS-----SSTSKGWTLLTGAGATLT-----STGPMKAH-GATTIVSPWGVLSLG-GMR--KGSGVGGTSDLWV-------------LDPISKLWRSV---SGEGDRRSMPSWPTGRYLSAVAIVKEAQDGHMIDTAADSVGRLVLFGGKDDWRRLDDLWLLGLRSLNVTTSQQQR 4761
TL GL+P++ + RV A+ G G S + P N W R V R+ E G+ +N P QR PS R GH+L ++ +Y+FGG++ S CS A L +P VS D W Y+ W + A+ P+ R+ H+ +V ++I+FGGR N A+D+ T G L D WE L +S T+ S R+ +A IP + R+ +CV ++SV+V+I H C L L ++GPGP P + + F GT + + F V++ + EC + F + +L + F +P G WTL L DT DG GT+ SW + ++ PC A W+N++S + P R H+ VV ++I GG G LSDL+R S + T++ WT L A+LT S + H G T+++P+ ++++G G++ + + +G + + L+ + WR+V SGE + P RY +A A V V R+ LFGG+DD LDDLW L L L+ Q +R
Sbjct: 714 TLHGLTPTAAYRFRVKALLLDGRGTFSDVVTLRMPTKPRNTWRRCVTRTVDEENTRAGMR------------------------VTNTPPLQR--FPSARRGHSLTLLDNSLYLFGGMAKSYECSRAHKVPCLLQPSP------RSVSND--FWRYDLRTETWWSVPPP-ALIPSPREKHSMAVVNDRLILFGGRQNDVSDANDASTWG-----PRALNDLWE--LSVSSSTAKQTSVSLDSRQPSALSIPDGGQVFALGRKSGSAGGEQLCVVNVSVSVQITHACPHTLGLQVFGPGP--------ATFPGRQQSAHFPRATGT---APNARAF---------------PVLLRSPDEAADKSECVPRTEKLQ--FVSTSSLEALSVFHQLPVAGNWTLELTDTAADGFVGTLDSWDVTFDVAPCV--PAFTWTNLSSIATGTAPTARFQHSVVVVGSSMFIFGGTAGGTGSELSDLYRLDYTPSVALGVAPTAR-WTQL----ASLTDRESPSIAERRVHAGRATLLTPFELMAVGRGLKSPRRASLGSRTAMAASRLESQLDVRLKRLEDLIDGWRAVATASGEDESALDEQRPVPRYWAASAFVSSLP--------GSKVPRVFLFGGQDDTTLLDDLWSLELAQLDEDFPQDRR 1287
BLAST of mRNA_P-littoralis_Contig158.48.1 vs. uniprot
Match: G5ABA3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5ABA3_PHYSP) HSP 1 Score: 151 bits (382), Expect = 5.630e-33 Identity = 188/753 (24.97%), Postives = 299/753 (39.71%), Query Frame = 1
Query: 2905 TLLGLSPSSEFNIRVAAVSRLGAGRPSVAFSFSTDALPANKWERVVPRSSSPERRGRGLSGPDLGKEEVWDTDLSAIQVRYDSSFSNPPTEQRQKLPSPRSGHTLAVVAGKVYMFGGLSASSRCSSALVGSKALGDTPGGAAVEDCVSGDAELWEYNPSLNMWTEILVNGAVAPAARDGHTASVAGSKMIIFGGR----GNASDSDTQGGLHTRTALLGDEWEIDLD------LSQHVTAATNSSTAIREGAATFIPLIVERADTHRQETDVDMCVTDISVAVEIDHRCTGQLRLILYGPGPPPGDTSKPGNTPRAEPAVLF-VGYNGTDGVSEDVDDFGAAGG---SSSSGGCGDGLVMMFKDSGNSGVWECCGKGSPFNGTFKAVDNL--------LVGRFLHMPAEGEWTLGLVDTTVDGSNGTVISWSLGVEMRPCDWRSALRWSNVTSSEGRSPPPRRTHHTAAVVDGGLYIAGGM-GASGA-LSDLWRRGNASS-----SSTSKGWTLLTGAGATLTSTGPMKAH-GATTIVSPWGVLSLG-GMR--KGSGVGGTSD-------------LWVLDPISKLWRSV--SGEGDRRSMPSW-PTGRYLSAVAIVKEAQDGHMIDTAADSVGRLVLFGGKDDWRRLDDLWLLGLRSLNVTTSQQQRSIRTQARPATGMGDIGTASLRPLAVGSWPLAEAGRYQRCAHFSVAGTANDTWHASCGEGADDDGGDGSCTMAAVLEMAWCLGEYQ 5016
T+ GLSPS+ + RV + G G S + PAN W+R V RS E G+ +N P R LPS R GH+L + +Y+FGGL+ S C+ A L P AV + ELW Y+ W +L A+ P R+ H+ ++ ++++FGGR +A+D+ T G L D WE+ + S + +S AI +G F + + Q +CVT++SV V++ H C +LR+ L+GPGP P + +V F V + D GA G ++ + ++ + + C G+ + + + F +P G WTL L DT DG GT+ SW + ++ PC A W+N+++ S P R H+ V +++ GG G +G L+DL+R S + T+K L++ + S + H G +++P+ ++++G G++ + + +G ++ L L+ + W SV S S P RY A A + +SV R+ LFGG+DD LDDLW L L L+ + + R L V +W R + A+ + W +SCG CT+ +L AWC YQ
Sbjct: 823 TISGLSPSAAYRFRVRPLQLDGHGVYSDVITLRMPPKPANTWQRCVTRSLDEEATRAGMR------------------------ITNTPPLLR--LPSARRGHSLTAMDNYLYLFGGLAKSYECNRAHKVPCLLQQRP--RAVSN------ELWRYDLLTETWWPVL-QPAILPPPREKHSMALVSGRLLLFGGRQSDASDANDASTWG-----PQALNDLWELSVSSTTAKQTSVSLDTQQPTSLAIPDGEEVFAVGTKSVSSSGEQ-----LCVTNVSVTVQVTHACPHKLRIQLFGPGP--------ATFPGRQQSVHFPVDSQARETTWSDRQGLGAFQGDHRATDTAPNSRAFPVLLRSPEEAADKIACSSGTQKLSFVSSASSSGTSGTPLEALSVFHQLPVAGNWTLELSDTAADGYVGTLDSWDVAFDLEPCV--PAFTWTNLSALATGSAPAPRFQHSVVVYQSSMFVFGGTRGGTGLELNDLYRLDYTPSVAFGVAPTAKWTQLVSLTDSESPSIAERRVHVGRAALLTPYELMAVGRGLKPPRRASLGSSTPVSASRFEAQLDVRLKQLEDMIDGWHSVRVSASASLDSTDEQLPAPRYWGASAFI--------FSPPGNSVPRVFLFGGQDDTTLLDDLWSLELSQLDEDFPRDRLKARR------------------LTVCAW------RQENSAYKAQ-------WASSCGA-TTTAAAVNKCTLEMLLLYAWCEEYYQ 1480
BLAST of mRNA_P-littoralis_Contig158.48.1 vs. uniprot
Match: A0A6V2FVZ9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2FVZ9_9STRA) HSP 1 Score: 140 bits (354), Expect = 4.080e-30 Identity = 180/776 (23.20%), Postives = 304/776 (39.18%), Query Frame = 1
Query: 2896 LRATLLGLSPSSEFNIRVAAVSRLGAGRPSVAFSFSTDALPANKWERVVPRSSSPERRGRGLSGPDLGKEEVWDTDLSAIQVRYDSSFSNPPTEQRQKLPSPRSGHTLAVVAGKVYMFGGLSASSRCSSALVG----------SKALGDTPGGAAVEDCVSGDAELWEYNPSLNMWTEIL------VNGAVAPAARDGHTASVAGSKMIIFGGRGNASDSDTQGGLHTRTALLGDEWEIDLDLSQHVTA--ATNSSTAIREGAATFIPLIVERADTHRQE--------TDVD-MCVTDI-SVAVEIDHRCTGQLRLI-LYGPGPPPGDTSKPGNTPRAEPAVLFVGYNGT--DGVSEDVDDFGAAGGSSSSGGCGDGLVMMFKDSGNSGVWECCGKGSPFNGTFKAVDNLLVGRFLHMPAEGEWTLGLVDTTVDGSNGTVISWSLGVEMRPCDWRSALRWSNVTSS--------EGRSPP--------------PRRTHHTAAVVDGGLYIAGGMGASGALSDLWRRGNASSSSTSKGWTLLTGAGATLTSTGPMKAH--GATTIVSPWGVLSLGGMRKGSGVGGTSDLWVLDPISKLWRSVSGEGDRRSMPS----WPTGRYLSAVAIVK-----EAQDGHMIDTAADSVGRLVLFGGKDDWRR---LDDLWLLGLRSLNVTTSQQQRSIRTQARPATGMGDIGTASLRPLAVGSWPLAEAGRYQRCAHFSVAGTANDTWHASCGEGADDDGGDGSCTMAAVLEMAWCLGEYQGV 5022
L T+ GL P + + IR A+ + S +F +T W +VPR P L ++ ++ + + Q SS + +P R GH+L +V GKVY+FGG + C + + + +G++ A + +LW +NP WT + P R+ H+A+V S I+ G G +SDS+ + + T LGD WEI+L HV + S + +R G + L+ H +D D +CV DI +V V + H C Q+ I +YGP S R + +F + T DG ++ + D + + + P +G F+ ++L F +P GEWT+ + ++ DG +G ++ W + +++ PC + A++W +T++ +G P PR H +V + +Y+ GG ++G L+D+W+ S+ WTLL G K H G + +++P+G++S GG++ D W+ +P + WR + +M + P RYL+ + + + H ID + +LFGG D DDLW+ + N T + R + D+ P A+ W L SCGE A + G C ++ +AWC EYQ +
Sbjct: 122 LNTTIEGLEPETTYCIRTVAIYSDSISKRSESFVVATLPKTYKNWIHIVPR-------------PHLTEDGEYNKRIPSPQ----SSIC-----KTGPIPPGRRGHSLTLVNGKVYLFGGATKMCTCGLSALSLMNITADMDHMRLIGNSQEDEACVVATTYSNDLWSFNPLSRRWTLHWSPSLPPCDDHSIPCGREQHSATVLSSGSILIIG-GLSSDSEHKL-VATNPVFLGDLWEINLG---HVASFIVKGSFSFLRSGPG--VELVDGNVLYHSSNAVGAGNDFSDGDEICVKDIRAVTVVLSHTCIEQIEYIAIYGP-------SLTSEHNRGQGVKIFSRSSSTEHDGNCQNTTS-----------------NITLSDKASKTILDFSSI-LPKSGQFRPPESLNAA-FSGLPVNGEWTIAIHESLGDGISGVLLDWRIHIDVVPC--KVAIQWKKITTNSCEKGNAAQGNICPQQSNEGDVKHDYFTPRYMHSAVSVGNDIIYVIGGA-STGNLNDMWKYDYGSNK-----WTLLNGR---------TKKHQYGQSFVLTPFGLISFGGVKSRMQYNIYRDTWLYNPFDEEWRPFGNAQKKGTMQNIVEETPKSRYLAGLCFMGIDGPIVLEQTHSIDHITSKNPQFLLFGGDSDITGNYLYDDLWIF---TWNETLFGKHLLSRQSQQAYC---DLRHGKKNPSAISMWNL------------------------SCGEIASNSSRIG-CRWEDIILLAWCNEEYQSL 794 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig158.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig158.48.1 >prot_P-littoralis_Contig158.48.1 ID=prot_P-littoralis_Contig158.48.1|Name=mRNA_P-littoralis_Contig158.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1679bp YELQYAVARRGVVNDDAAVWQTVEGDDKNTWDITARVDGFDRLTGKNHTVback to top mRNA from alignment at P-littoralis_Contig158:163575..180993- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig158.48.1 ID=mRNA_P-littoralis_Contig158.48.1|Name=mRNA_P-littoralis_Contig158.48.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=17419bp|location=Sequence derived from alignment at P-littoralis_Contig158:163575..180993- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig158:163575..180993- >mRNA_P-littoralis_Contig158.48.1 ID=mRNA_P-littoralis_Contig158.48.1|Name=mRNA_P-littoralis_Contig158.48.1|organism=Pylaiella littoralis U1_48|type=CDS|length=5037bp|location=Sequence derived from alignment at P-littoralis_Contig158:163575..180993- (Pylaiella littoralis U1_48)back to top |