prot_P-littoralis_Contig158.41.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig158.41.2
Unique Nameprot_P-littoralis_Contig158.41.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length390
Homology
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BLAST of mRNA_P-littoralis_Contig158.41.2 vs. uniprot
Match: A0A6H5JSX4_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX4_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 3.290e-136
Identity = 214/323 (66.25%), Postives = 251/323 (77.71%), Query Frame = 0 
Query:   66 QSAAAATHRRHKKQETAPAVVMVVGMPGVGRSTLANKLLHHPSIDPFEEGYKEFGAESETQRAEWDGTVVIDTPAIPSQDPQTTLTNFDVVVNALRREGSLSTLIFLVQQEEVSPAEFAVYGILLRQLNRLPCSKLIVCRQAALSRRHKRTEEDRRHSSTQFVERVLHDSGLSMPLVLLDDGYGSASFGQVAEIRRFIRRSERAPVKL-ASLRTSTELRQFMQRLADPVFRLSALKEEIEELEVSLWHRSLWMTSQVVPLAYNSVCSPGAGCLWTGPYVMRELEAFNQIRTRLRNKKEEVKFNAVHEEELRAAKGVSAYFNRM 387
            QSA A ++ R +++  AP VVMV+GMP  G+S LANKLL+HP+ D FEEG   +G+ +ETQR EW   VVIDTP  P  DP+TT  NFD +V ALRREGSLSTLIFLVQQEEVSP EF  Y +LLRQLN LPCSKLIVCRQAALSRRHKRTEE+RRHS  QFVE VL DSGL+MPLVLL+DGYGS S  QV EIRRF+ RSERA + L ASLRT  ELR F  +LADP  RL  ++EE+E++E SLWHRSLWM  QVVPLAY SV SPGAGC+WTGPYV RE EA  ++R  L +KKEE++ + V E+ELRAA+GV A+ + M
Sbjct:   18 QSAGAGSNGRRRQE--APKVVMVIGMPRAGKSNLANKLLNHPTWDAFEEGDGTYGSTTETQRVEWADLVVIDTPGFPGHDPKTTSKNFDALVKALRREGSLSTLIFLVQQEEVSPTEFRDYAVLLRQLNHLPCSKLIVCRQAALSRRHKRTEEERRHSGAQFVEGVLDDSGLNMPLVLLNDGYGSESIKQVDEIRRFVGRSERARLDLVASLRTFAELRSFAAKLADPASRLRTVREEVEQMEASLWHRSLWMACQVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELNDKKEEIELDIVDEQELRAAQGVLAFLDYM 338
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BLAST of mRNA_P-littoralis_Contig158.41.2 vs. uniprot
Match: D8LN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN49_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 1.160e-60
Identity = 107/169 (63.31%), Postives = 129/169 (76.33%), Query Frame = 0 
Query:  220 RRHSSTQFVERVLHDSGLSMPLVLLDDGYGSASFGQVAEIRRFIRRSERAPVK-LASLRTSTELRQFMQRLADPVFRLSALKEEIEELEVSLWHRSLWMTSQVVPLAYNSVCSPGAGCLWTGPYVMRELEAFNQIRTRLRNKKEEVKFNAVHEEELRAAKGVSAYFNRM 387
            +RH+  QFVE VL DSGL+MPLVLL+DGYGS SF QV EIRRF+ RSERA +  LAS RT  ELR F  +LADP  RL  L+EE+E++E SLWHRSLWM   VVPLAY SV SPGAGC+WTGPYV RE EA  ++R  L +KKEE++ + V E+EL AA+GVSA+ + M
Sbjct:   26 KRHAGAQFVEGVLEDSGLNMPLVLLNDGYGSESFKQVDEIRRFVGRSERARLDPLASPRTFAELRSFAAKLADPASRLRTLREEVEQMEASLWHRSLWMACHVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELNDKKEEIELDIVDEQELCAAQGVSAFLDYM 194
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig158.41.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSX4_9PHAE3.290e-13666.25G domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
D8LN49_ECTSI1.160e-6063.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 86..182
e-value: 5.6E-5
score: 23.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 58..235
e-value: 6.2E-9
score: 37.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 76..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig158contigP-littoralis_Contig158:136632..161284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig158.41.2mRNA_P-littoralis_Contig158.41.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig158 136440..163296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig158.41.2 ID=prot_P-littoralis_Contig158.41.2|Name=mRNA_P-littoralis_Contig158.41.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=390bp
MNVIPENQNCTQTKSAQRYPTSTHCSPEPQHPVSPAHPERIPSIHLLLRK
MATEEVHSPPEMQRLQSAAAATHRRHKKQETAPAVVMVVGMPGVGRSTLA
NKLLHHPSIDPFEEGYKEFGAESETQRAEWDGTVVIDTPAIPSQDPQTTL
TNFDVVVNALRREGSLSTLIFLVQQEEVSPAEFAVYGILLRQLNRLPCSK
LIVCRQAALSRRHKRTEEDRRHSSTQFVERVLHDSGLSMPLVLLDDGYGS
ASFGQVAEIRRFIRRSERAPVKLASLRTSTELRQFMQRLADPVFRLSALK
EEIEELEVSLWHRSLWMTSQVVPLAYNSVCSPGAGCLWTGPYVMRELEAF
NQIRTRLRNKKEEVKFNAVHEEELRAAKGVSAYFNRMWE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP-bd
IPR027417P-loop_NTPase