mRNA_P-littoralis_Contig158.34.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig158.34.1 vs. uniprot
Match: D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI) HSP 1 Score: 223 bits (568), Expect = 2.450e-72 Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 1
Query: 22 MPSTLGKLYDAAASGSVERTVAVLSQGSVDIDGGYGDGGRTPLMVASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALIKAGADTEALGVDGTPLHVAAAKGFHEGMVVLIHAG 402
MPSTL KLYDAAASGSVERTVAVLSQGSV+IDGGYGD GRTPLM ASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKAL+KAGA EA GVDGTPLHVAAAKGFH+GMV+LIHAG
Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVNIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAG 127
BLAST of mRNA_P-littoralis_Contig158.34.1 vs. uniprot
Match: D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI) HSP 1 Score: 214 bits (544), Expect = 1.140e-68 Identity = 113/125 (90.40%), Postives = 117/125 (93.60%), Query Frame = 1
Query: 22 MPSTLGKLYDAAASGSVERTVAVLSQGSVDIDGGYGDGGRTPLMVASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALIKAGADTEALGVDGTPLHVAAAKGFHEGMVVLIH 396
MPSTL KLYDAAASGSVERTVAVLSQGSVDIDGGYGD GRTPLM ASTMGYLRVVRVLLR GARVSVADNDGATALHLSIV KHLAVS+AL+KAGA EA GVDGTPLHVAAAKGFH+GMV+LIH
Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIVIKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIH 125
BLAST of mRNA_P-littoralis_Contig158.34.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 218 bits (556), Expect = 3.830e-64 Identity = 115/128 (89.84%), Postives = 119/128 (92.97%), Query Frame = 1
Query: 22 MPSTLGKLYDAAASGSVERTVAVLSQGSVDIDGGYGDGGRTPLMVASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALIKAGADTEALGVDGTPLHVAAAKGFHEGMVVLIHAGS 405
MPSTL KLY A ASGSVERTVAVLSQGSVDIDGGYGD GRTPLM A TMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKAL+KAGA EA GVDGTPLHVAAAKGFH+GMV+LIHAG+
Sbjct: 1 MPSTLSKLYHAPASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGA 128
BLAST of mRNA_P-littoralis_Contig158.34.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 154 bits (390), Expect = 4.630e-41 Identity = 87/116 (75.00%), Postives = 93/116 (80.17%), Query Frame = 1
Query: 58 ASGSVERTVAVLSQGSVDIDGGYGDGGRTPLMVASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALIKAGADTEALGVDGTPLHVAAAKGFHEGMVVLIHAGS 405
A GSVERTVA+LS+GSVDIDG YGD GRTPLMVASTMGYLRV RVLLRLGA VSVADNDGATALHLS+ N+HLAVSKALIKAGA+ EA VDG MVVLIHAG+
Sbjct: 5 ARGSVERTVALLSRGSVDIDGSYGDAGRTPLMVASTMGYLRVERVLLRLGAGVSVADNDGATALHLSVFNQHLAVSKALIKAGAEVEARCVDG--------------MVVLIHAGA 106
BLAST of mRNA_P-littoralis_Contig158.34.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 137 bits (346), Expect = 2.000e-36 Identity = 76/90 (84.44%), Postives = 79/90 (87.78%), Query Frame = 1
Query: 154 VASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALIKAGADTEA-------LGVDGTPLHVAAAKGFHEGMVVLIHAG 402
VASTMGYLRVVRVLLRLGARVS ADNDGATALHLSIVNKHLAVSKAL+KAGAD EA LGV TPLHVAAAKGFH+GMV+LIHAG
Sbjct: 37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAG 126
BLAST of mRNA_P-littoralis_Contig158.34.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI) HSP 1 Score: 117 bits (293), Expect = 1.980e-30 Identity = 74/125 (59.20%), Postives = 86/125 (68.80%), Query Frame = 1
Query: 22 MPSTLGKLYDAAASGSVERTVAVLSQGSVDIDGGYGDGGRTPLMVASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALIKAGADTEAL-GVDGTPLHVAAAKGFHEGMVVLI 393
MPSTL K ASGS++ T+A ID G GD +TPLMVAS +G RVVR LLR GA VSVAD+DG TALH S+ + HLAVSK LI+AGAD EA G TPLHVAA KGF +GM +L+
Sbjct: 1 MPSTLSK-----ASGSIDPTIATTG-----IDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGKDTPLHVAATKGFCQGMKLLM 115
BLAST of mRNA_P-littoralis_Contig158.34.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 121 bits (304), Expect = 3.520e-30 Identity = 77/139 (55.40%), Postives = 96/139 (69.06%), Query Frame = 1
Query: 22 MPSTLGK-LYDAAASGSVERTVAVLSQGSVDIDGGYGDGGRTPLMVASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALIKAGADTEALG---------VDG-TPLHVAAAKGFHEGMVVLIHAGS 405
+PST LY AA+SGSVERT+ +LS G +ID + G T LM A+ GYLR+VRVLLR GA VSV+ +DG TALH +I ++LAV+KALIKAGA+ EA V G TPLH+AA +GF EGMV LI+AG+
Sbjct: 13 VPSTTSDTLYCAASSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGA 151
BLAST of mRNA_P-littoralis_Contig158.34.1 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 1.410e-15 Identity = 61/127 (48.03%), Postives = 78/127 (61.42%), Query Frame = 1
Query: 13 VPTMPSTLGK---LYDAAASGSVERTVAVL-SQGSVDIDGGYGDGGRTPLMVASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNK-HLAVSKALIKAGADTEALGVDG-TPLHVAAAKGFHE 375
VP P G L+ AA GS+ER VA+L S+ S+DI+ G + G TPLM+A+ G RVVR+L GA VSV +D TALH S + H V+K L+KAGAD EA+ +G TPLH+ A G E
Sbjct: 6 VPAQPWPRGPQNDLHRAANDGSIERVVALLASRPSIDINQGA-EYGWTPLMLAAWRGSSRVVRILPNKGANVSVVADDFHTALHFSTQDGGHPVVTKMLLKAGADFEAVTSEGETPLHLVADSGCWE 131
BLAST of mRNA_P-littoralis_Contig158.34.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 1.620e-15 Identity = 61/140 (43.57%), Postives = 75/140 (53.57%), Query Frame = 1
Query: 22 MPSTLGKLYDAAASGSVERTVAVLSQGSVDIDGGYGDGGRTPLMVASTMGYLRVVRVLLRLGARVSVADNDG--------ATALHLSIVNKHLAVSKALIKAG---ADTEALGVDG-TPLHVAAAKGFHEGMVVLIHAGS 405
MPST LY+AA +GSVERT+ +LS G +ID + G T LM A+ GYLR+VRVLLR GA VSV+ +DG KA D E V G TPLH+A +GF +GMV LI AG+
Sbjct: 1 MPSTTSTLYNAAWTGSVERTLDLLSDGFTEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEV--VQGQTPLHLATGEGFCDGMVALIDAGA 138
BLAST of mRNA_P-littoralis_Contig158.34.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 1.350e-10 Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 34 LGKLYDAAASGSVERTVAVLSQGSVDIDGGYGDGGRTPLMVASTMGYLRVVRVLLRLGARVSVADNDGATALHLS 258
+ KL++AA GS T A+LS GS+DIDGG GG TPLM A + VV +LL GA VS +++G TALHLS
Sbjct: 15 INKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGG-TPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLS 88 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig158.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig158.34.1 >prot_P-littoralis_Contig158.34.1 ID=prot_P-littoralis_Contig158.34.1|Name=mRNA_P-littoralis_Contig158.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=128bp MPSTLGKLYDAAASGSVERTVAVLSQGSVDIDGGYGDGGRTPLMVASTMGback to top mRNA from alignment at P-littoralis_Contig158:101081..101485- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig158.34.1 ID=mRNA_P-littoralis_Contig158.34.1|Name=mRNA_P-littoralis_Contig158.34.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=405bp|location=Sequence derived from alignment at P-littoralis_Contig158:101081..101485- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig158:101081..101485- >mRNA_P-littoralis_Contig158.34.1 ID=mRNA_P-littoralis_Contig158.34.1|Name=mRNA_P-littoralis_Contig158.34.1|organism=Pylaiella littoralis U1_48|type=CDS|length=384bp|location=Sequence derived from alignment at P-littoralis_Contig158:101081..101485- (Pylaiella littoralis U1_48)back to top |