prot_P-littoralis_Contig157.91.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig157.91.2
Unique Nameprot_P-littoralis_Contig157.91.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length487
Homology
BLAST of mRNA_P-littoralis_Contig157.91.2 vs. uniprot
Match: A0A6H5L3V5_9PHAE (PseudoU_synth_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3V5_9PHAE)

HSP 1 Score: 629 bits (1621), Expect = 5.750e-222
Identity = 339/474 (71.52%), Postives = 369/474 (77.85%), Query Frame = 0
Query:   30 AMMRRPPVRCQALADSMLSSTGARKGLAITQRCLGASRQCGDIPTETLSLDDDFVIINKPADVRMDGDFDVTVEKLIRHWSPTLEGKPLKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKIYLAVVQGALDAEGVPRREEEPDGWGEGRDGGGG-------RKRRPDSVQHTPAHGFFQRKKDKLLRAAELGETLSAEDATFSKLSWGDIKFDKLASRSFHAAAKEDKIRAVAAAQEALFGTAQGAPDRGVFRAPSDGPGAFRVDASVSEVPGDFTMRLDEKAGGKGKPSRTFVQVLEKGSYRGQAVTKVLFRPHTGRRHQLRLHALHMGHPILGDTTYGEVDHTVPRMCLHAQSLRLRLAPPTKAAAAXXXXXXXXXRTQAQQHGSEGAATAAVTAPVTAGA----------GSQGGETPRGKRYWGRQAVRPAAAVAGLGEGGEGEVVLDVVAPDPFVFVNGELQL 486
            ++MRR P+RCQALAD+++    A++GL++T R L ASRQCGDIPTETLSLDDDFV+INKPADVRMDG+FDV V+KLIR+W PTLE K LKWVHQLDFATSGVLCVALHREAAARGCEAFRERRA+K YLAVVQGA+D E VPRREEEPDGW EGRDG G        RKRRPDSVQHTPAHGFFQRKKD LLRA ELGETLS ED  FSKLSWGDIKFDK ASR FH+AAK DKIRAVA A+ A F  AQGAPDRGVFRAP DG G  RVDASVSEVPGDF MRLDE+AGGKGKPSRTFV+VLE GSYRG+ VTKVL RPHTGRRHQLRLHALHMGHPILGDTTYG+ DHT+PRMCLHAQSL LRLAPP+ AA +          T+A      G                        G  GG   RGKRYWGRQ V+PA        GG+ EV+LDVVAPDPFVFV+GELQL
Sbjct:   34 SLMRRSPIRCQALADTVM----AQRGLSMTSRELAASRQCGDIPTETLSLDDDFVVINKPADVRMDGNFDVAVDKLIRYWCPTLEDKELKWVHQLDFATSGVLCVALHREAAARGCEAFRERRAKKSYLAVVQGAVDPESVPRREEEPDGWREGRDGNGXXXXXXXXRKRRPDSVQHTPAHGFFQRKKDLLLRAIELGETLSPEDLAFSKLSWGDIKFDKAASRPFHSAAKADKIRAVAEAEAARFQAAQGAPDRGVFRAPGDGDGELRVDASVSEVPGDFRMRLDEEAGGKGKPSRTFVKVLEHGSYRGRLVTKVLMRPHTGRRHQLRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRLAPPSDAACSD---------TEAPAKQESGXXXXXXXXXXXXXXXXXXXXXXXXGGMGGG--RGKRYWGRQKVQPARVT-----GGKQEVILDVVAPDPFVFVDGELQL 487          
BLAST of mRNA_P-littoralis_Contig157.91.2 vs. uniprot
Match: A0A8K1CQW5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQW5_PYTOL)

HSP 1 Score: 164 bits (416), Expect = 9.630e-42
Identity = 130/382 (34.03%), Postives = 183/382 (47.91%), Query Frame = 0
Query:   57 AITQRCLGASRQCGDIPTETLSLDDDFVIINKPADVRMDGDFDVTVEKLIRHWSPTLEGKPLKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKIYLAVVQGAL-----DAEGVPRRE-----------------EEPDGWGEGRDGGGGRKRRPD---SVQHTPAHGFFQRKKDKLLRAAELGET-LSAEDATFSKLSWGDIKFDKLASRSFHAAAKEDKIRAV-------------AAAQ---EALFGTAQGAPDRGVFRAPSDGPGAFRVDASVSEVPGD-FTMRLDEKAGGK-----GKPSRTFVQVLEKGSYRGQAVTKVLFRPHTGRRHQLRLHALHMGHPILGDTTYGEVDHTVPRMCLHAQSLRLRLAP 390
            A T    G  +   ++    L+     V++NK  D R+DG FD T+EK +    P ++    +W+HQLDFATSGV+CV L +EA A  C  FRE+R +K YLAVV+G L     +   +P                    EE D     R G    ++RPD    V+  PA  FFQ ++  LLR  +     L+AE+A      W D+  ++     +   + EDK+R +              AAQ   +  +   +  P         + P A+  D  ++E   D F MR+ ++   +     GK S T   VL  G+Y+ + +TKVL RP TGRRHQLRLH  H G PI+GD TYG  + T PRM LHA  L L  +P
Sbjct:   59 ATTDAQRGGPKLLSELQLRVLAKTPYLVVLNKREDHRLDGAFDATIEKALHRDFPDVD--KFRWIHQLDFATSGVMCVGLEKEATAMACRLFREKRVQKEYLAVVRGHLPFHPRELTSLPEGHRVRACTFSKLGLLIQDTEEFDRLKTQRKGTATHQKRPDYPRGVRQAPA--FFQIERSALLREQQNNSRELTAEEAQLVAAKWKDLTSEQ--QNRYQTMSNEDKVRYMKELVRFLDEERERVAAQRRYDVSYAQERNEPTE------EEEPVAYVFDDPIAEPGRDTFRMRIGDRTNVEDPTVAGKASATIAFVLGHGTYQDEPMTKVLLRPLTGRRHQLRLHLAHNGFPIVGDATYGSENETAPRMMLHAWRLWLMASP 428          
BLAST of mRNA_P-littoralis_Contig157.91.2 vs. uniprot
Match: W2Q6J3_PHYPN (PseudoU_synth_2 domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=W2Q6J3_PHYPN)

HSP 1 Score: 164 bits (416), Expect = 1.630e-41
Identity = 132/372 (35.48%), Postives = 179/372 (48.12%), Query Frame = 0
Query:   64 GASRQCGDIPTETLSLDDDFVIINKPADVRMDGDFDVTVEKLIRHWSPTLEGKPLKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKIYLAVVQGAL--------DAEGVPRRE-------------EEPDGWGEGRDGGGGRKRRPD---SVQHTPAHGFFQRKKDKLLRAAE---LGET-----------LSAEDATFSKLSWGDIKFDKLASRSFHAAAKEDKIRAVAAAQEAL----FGTAQGAPDRGVFRAPSDGPGAFRVDASVSEV---PGDFTMRLDEKAGGKGKPSRTFVQVLEKGSYRGQAVTKVLFRPHTGRRHQLRLHALHMGHPILGDTTYGEVDHTVPRMCLHAQSLRLRLAP 390
            G  +    +    LS D+ FV++NK  D RMDG FDVT+EK +    P +E    +W+HQLDFATSGVL V  ++EA A GC  FRE++ +K YLAVVQG L        D  GVP +              EE +     + G    ++ P      +H P    F  ++ +LLR ++    GE            L+  +  F+K++W D+  ++    ++   AK DK R +    E L       A+      + R  S+ P A+  DA + E     G F M +  +A    K S T   VL    Y G+ VTKVL RP  GRRHQLRLH  H G PI GD TYG  +   PRM LHA  + LR  P
Sbjct:   85 GGPKTLEQLQLRILSKDEHFVVLNKGPDERMDGAFDVTLEKALARDFPQVE--KFRWIHQLDFATSGVLVVGANKEATATGCRLFREKQVQKEYLAVVQGHLPFNPADSVDTAGVPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKMPGYPRGARHGP--NLFTMEQARLLRESQGDSRGEVRGTSNGAGTRELTPAELAFTKMTWHDLTKEE--KDAYTEKAKADKQRFLKELSEFLSQEKVRLARKRNYESLDREDSEEPVAYIFDAPIIEPHRSTGVFRMLVGTEADAAAKQSTTICFVLGHAMYEGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRGRP 450          
BLAST of mRNA_P-littoralis_Contig157.91.2 vs. uniprot
Match: A0A329SUS2_9STRA (PseudoU_synth_2 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SUS2_9STRA)

HSP 1 Score: 156 bits (395), Expect = 6.870e-39
Identity = 130/376 (34.57%), Postives = 184/376 (48.94%), Query Frame = 0
Query:   64 GASRQCGDIPTETLSLDDDFVIINKPADVRMDGDFDVTVEKLIRHWSPTLEGKPLKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKIYLAVVQGAL--------DAEGVPRRE-------------EEPDGWGEGRDGGGGRKRRPD---SVQHTPAHGFFQRKKDKLLRAAE---LGET-----------LSAEDATFSKLSWGDIKFDKLASRSFHAAAKEDKIRAVAA-----AQEALFGTAQGAPDRGVFRAPSDG---PGAFRVDASVSEV---PGDFTMRLDEKAGGKGKPSRTFVQVLEKGSYRGQAVTKVLFRPHTGRRHQLRLHALHMGHPILGDTTYGEVDHTVPRMCLHAQSLRLRLAP 390
            G  +    +    LS D+ FV++ K  D RMDG FDVT+EK +    P ++    +W+HQLDFATSGVL V  ++EA A GC  FRE++ +K YLAVV+G L        D++GVP +              EE +     + G    ++ P     V+H P    F  ++ +LLR ++    GE            L+  +  F+K++W D+  ++    ++   AKEDK R +       +QE +   A+      + R  S+    P A+  DA + E     G F M +  +     K S T   VL    Y+G+ VTKVL RP  GRRHQLRLH  H G PI GD TYG  +   PRM LHA  + LR  P
Sbjct:   34 GGPKSLEQLQLRILSRDEHFVVLYKGPDERMDGAFDVTLEKALARDFPQVD--KFRWIHQLDFATSGVLAVGANKEATATGCRLFREKQVQKEYLAVVRGHLPFNPAESVDSDGVPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKMPGYPRGVRHGP--NLFTMEQAQLLRESQGVPRGEVRGTSAGAGARELTPAELAFTKMTWHDLTKEE--KDAYTEKAKEDKQRFLQEFSRFLSQEKVL-LARKRKYESLDREDSEEANEPVAYIFDAPIIEPHRSTGVFRMLVGTETNTVAKQSTTICFVLGHAMYKGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRGRP 402          
BLAST of mRNA_P-littoralis_Contig157.91.2 vs. uniprot
Match: A0A225VLR7_9STRA (Pseudouridine synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLR7_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.060e-38
Identity = 126/363 (34.71%), Postives = 175/363 (48.21%), Query Frame = 0
Query:   64 GASRQCGDIPTETLSLDDDFVIINKPADVRMDGDFDVTVEKLIRHWSPTLEGKPLKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKIYLAVVQ----------GALDAEGVPRRE-------------EEPDGWGEGRDGGGGRKRRPD---SVQHTPAHGFFQRKKDKLLRAAELGETLSAEDATFSKLSWGDIKFDKLASRSFHAAAKEDKIRAVAAAQEALFGTAQGAPDRGVFRA-------PSDGPGAFRVDASVSEV---PGDFTMRLDEKAGGKGKPSRTFVQVLEKGSYRGQAVTKVLFRPHTGRRHQLRLHALHMGHPILGDTTYGEVDHTVPRMCLHAQSLRLRLAP 390
            G  +    +    LS D+ FV++NK  D RMDG FDVT+EK +    P +E    +W+HQLDFATSGVL V   +EA A GC  FRE++ +K YLAVV+           ++D  GVP +              EE +     + G    ++ P      +H P    F  ++ +LLR ++ G+  S  + TF+K+SW D+  ++    ++   AK DK R +    E L         +  +          ++ P A+  DA + E     G F M++        K S T   VL    Y G+ VTKVL RP  GRRHQLRLH  H G PI GD TYG  +   PRM LHA  + LR  P
Sbjct:   97 GGPKMLEQLKLRVLSKDEHFVVLNKGPDERMDGAFDVTLEKALARDFPEIE--KFRWIHQLDFATSGVLVVGATKEATATGCRLFREKQVQKEYLAVVRVRGHLPFNPANSVDKCGVPAKACTFSKLGLLIQDMEEMERLRNQQRGTRTHQKMPGYPRGARHGP--NLFTMEQARLLRESQ-GD--SRAELTFTKMSWHDLTKEE--KDAYTEKAKADKQRFLREFSEFLSQEKVRLARKRKYECLDREDSEEANEPVAYIFDAPIIEPHRSTGVFRMQVGTDTNTSAKQSTTIAFVLGHAVYEGEPVTKVLLRPLNGRRHQLRLHLAHHGFPITGDVTYGSQEDEAPRMMLHAWRIWLRGRP 450          
BLAST of mRNA_P-littoralis_Contig157.91.2 vs. uniprot
Match: A0A7S2RMN8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RMN8_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.760e-38
Identity = 122/378 (32.28%), Postives = 168/378 (44.44%), Query Frame = 0
Query:   31 MMRRPPVRCQALADSMLSSTGARKGLAITQRCLGASRQCGDIPTETLSLDDDFVIINKPADVRMDGDFDVTVEKLIRHWSPTLEGKPLKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKIYLAVVQGALDAEGVPRREEEPDGWGEGRDGGGGRKRRPDSVQHTPAHGFFQRKKDKLLRAAELGETLSAEDATFSKLSWGDIKFDKLASRSFHAAAKEDKIRAVAAAQEALFGTAQGAPDRGVFRAPSDGPGAFRVDASVSEVPGDFTMRLDEKAGGKGKPSRTFVQVLEKGSYRGQAVTKVLFRPHTGRRHQLRLHALHMGHPILGDTTYGEVDHTV------------PRMCLHAQSLRLRLAPPTKAAA 396
            M R  P+R +  A +  +  G+R G++          +  D+  + L+ + D++++NKP D+R+DGDFDVT+EK +      L+   ++WVHQLDFATSG +C+ L+R  A    + F  R+ RK YLA+V G LD                                     G F  K                           D K+    S +  A   EDK           F T++G   R +            V  ++S +P DF MR+D     +G+ ++T V VLE GS  G  VTKVL RP  GRRHQLRLH LH+G+PILGD TYG V  +              RM LHA    LRL  P K+ A
Sbjct:    2 MKRLLPIRSEICARAGSTGHGSRGGVS----------RLSDLKVDILAENQDYLVVNKPCDLRLDGDFDVTLEKFVLGRVKGLD--KVRWVHQLDFATSGCICMGLNRRGAGNASKMFAGRKTRKYYLALVYGHLD------------------------------------RGLFAGK------------------------GVDDYKY----STNTQAVRVEDKFE-----NSDCFYTSEGGVVRDLLSDFGSSIPVLEVSGAISAIPDDFRMRIDPS---EGREAKTQVVVLEHGSLYGVDVTKVLLRPIQGRRHQLRLHCLHLGYPILGDATYGPVFESCVGAGDGKFYNSPERMFLHA----LRLEIPFKSDA 291          
BLAST of mRNA_P-littoralis_Contig157.91.2 vs. uniprot
Match: A0A0P1AWK8_PLAHL (Rna pseudouridylate synthase-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWK8_PLAHL)

HSP 1 Score: 154 bits (388), Expect = 3.110e-38
Identity = 125/356 (35.11%), Postives = 170/356 (47.75%), Query Frame = 0
Query:   64 GASRQCGDIPTETLSLDDDFVIINKPADVRMDGDFDVTVEKLIRHWSPTLEGKPLKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKIYLAVVQGAL--------DAEGVPRREEEPDGWGEGRDGGGGRKRR-----PDSVQHTPAHGFFQRKKDKLLRAAELGET---------LSAEDATFSKLSWGDI------------KFDKLAS-RSFHAAAKEDKIRAVAAAQEALFGTAQGAPDRGVFRAPSDGPGAFRVDASV---SEVPGDFTMRLDEKAGGKGKPSRTFVQVLEKGSYRGQAVTKVLFRPHTGRRHQLRLHALHMGHPILGDTTYGEVDHTVPRMCLHA 381
            G   +  D+    LS + +FV++NK  D R+DG FDVT+EK +    P ++    +W+HQLDFATSGVL V +++EA A GC  FRE++ +K YLAV++G L        D E + R   +  G          RK +     P   +H P    F  ++ +LLR   + E          L+  +  F+K++W D+            K DK    R F     ++KIR    A E  + +  G  DRG    P     A+  D+ +    E  G F M +  K     K S T   VL    Y G+ VTKVL RP  GRRHQLRLH    G PI GD TYG  +   PRM LHA
Sbjct:   29 GGPSELQDLQLHILSKNKNFVVLNKGPDERLDGAFDVTLEKALTRDFPHVD--KFRWIHQLDFATSGVLVVGVNKEATATGCRLFREKQVQKEYLAVIRGHLPFDPAKCTDMEELERFRNQQRG---------SRKHQKMPGYPRGARHGP--NLFAMEQAQLLRDHHIRENSFIKTQTRALTPTELAFTKMTWHDLTKEEKDTYLQRAKVDKERFLREFSEFLSQEKIRL---AHERKYDSLNG-DDRGRCHEPV----AYIFDSPILEPHESTGVFRMLVGSKNDIMAKQSTTICFVLGHSMYNGEPVTKVLLRPLNGRRHQLRLHLADHGFPIAGDVTYGSQEDEAPRMMLHA 363          
BLAST of mRNA_P-littoralis_Contig157.91.2 vs. uniprot
Match: A0A833WT58_PHYIN (RNA pseudouridylate synthase n=3 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WT58_PHYIN)

HSP 1 Score: 147 bits (372), Expect = 2.600e-35
Identity = 127/381 (33.33%), Postives = 180/381 (47.24%), Query Frame = 0
Query:   64 GASRQCGDIPTETLSLDDDFVIINKPADVRMDGDFDVTVEKLIRHWSPTLEGKPLKWVHQLDF------ATSGVLCVALHREAAARGCEAFRERRARKIYLAVVQGAL--------DAEGVPRRE-------------EEPDGWGEGRDGGGGRKRRPD---SVQHTPAHGFFQRKKDKLLRAAE---LGET-----------LSAEDATFSKLSWGDIKFDKLASRSFHAAAKEDKIRAVAAAQEALFGTAQGAPDRGVFRA-------PSDGPGAFRVDASVSEV---PGDFTMRLDEKAGGKGKPSRTFVQVLEKGSYRGQAVTKVLFRPHTGRRHQLRLHALHMGHPILGDTTYGEVDHTVPRMCLHAQSLRLRLAP 390
            G  +    +    LS D+ FV++NK  DVRMDG FDVT+EK +    P +E    +W+HQLDF      ATSGVL V ++++A A GC  FRE++ +K YLAVV+G L        D   +P +              EE +     + G    ++ P     V+H P    F  ++ +LLR ++    GE            L+  +  F+K++W D+  ++    ++   AK DK R +    E L         +  + +        ++ P A+  DA V E     G F M +  +     K S T   VL    Y+G+ VTKVL RP  GRRHQLRLH  H G PI GD TYG  +   PRM LHA  + LR  P
Sbjct:   85 GGPKTQDQLHLRVLSRDEHFVVLNKGPDVRMDGAFDVTLEKALARDFPQVE--KFRWIHQLDFVMTELAATSGVLVVGVNKDATATGCRLFREKQVQKEYLAVVRGHLPFNPAESVDTAALPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKTPGYPRGVRHGP--NLFTMEQAQLLRKSQEHPRGEVRGSSNRAEARELTPAELAFTKMTWHDLTKEE--KGAYTEKAKADKRRFLKEFSEFLNQEKIRLARKRKYESFDGEDSEEANEPVAYVFDAPVIEPHRSTGVFRMLVGTETDTAAKQSTTMCFVLGHAIYKGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRGRP 459          
BLAST of mRNA_P-littoralis_Contig157.91.2 vs. uniprot
Match: A0A484EHY7_BRELC (HMG box domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHY7_BRELC)

HSP 1 Score: 142 bits (358), Expect = 9.290e-34
Identity = 127/371 (34.23%), Postives = 175/371 (47.17%), Query Frame = 0
Query:   64 GASRQCGDIPTETLSLDDDFVIINKPADVRMDGDFDVTVEKLIRHWSPTLEGKPLKWVHQLDF-----ATSGVLCVALHREAAARGCEAFRERRARKIYLAVVQGALD---AEGVPRRE------------EEPDGWGEGRDGGGGRKRR------PDSVQHTP-----AHGFFQRKKDKLLRAAEL---GETLSAEDATFSKLSWGDIKFDKLASRSFHAAAKEDKIRAVAAAQEAL-FGTAQGAPDRGVFRAPSDG------PGAFRVDASVSEVPGD---FTMRLDEKAGGKGKPSRTFVQVLEKGSYRGQAVTKVLFRPHTGRRHQLRLHALHMGHPILGDTTYGEVDHTVPRMCLHAQSLRLRLAP 390
            G   +   +    L  DDDFV+++K  D RMDG FDVT+EK +    P ++    +W+HQLDF     ATSGVL V L +EA A  C  FRE++ +K YLA+V+G L    AE V +              ++ +     R+   G K        P  V+H P           RK +K L+   L    ++L+AE+  F++L+W  +  ++   R F   A  DK R      E L   T + A         +D       P A+  DA + E       F M + +++    K S T   VL    Y G+ V+KVL RP  GRRHQLRLH  H G PI+GD TYG  D   PRM LHA  + L  +P
Sbjct:   31 GGPMELAQLQLRVLHKDDDFVVLDKGPDERMDGAFDVTLEKALARDFPHVD--KFRWIHQLDFVFACAATSGVLVVGLKKEATATACRLFREKQVQKEYLALVRGHLPLNPAESVNQSAHACTFSKLGLFIQDTEDLERMRNQQRGSKAHFKMPGYPRGVRHGPNIFAMEQAELLRKSNKRLKEDNLCSKAKSLTAEELAFTQLTWHGLSNEE--KRLFSEKAIADKQRYAREFNEFLRLETLRLAHLHKYESLAADKSENVNEPLAYIFDAPIIEPHQSLKVFRMVVGKESNALAKQSTTLCFVLGHAIYDGEPVSKVLLRPLNGRRHQLRLHLAHHGFPIVGDVTYGSQDDVAPRMMLHAWRIWLHGSP 397          
BLAST of mRNA_P-littoralis_Contig157.91.2 vs. uniprot
Match: A0A6A3NSK8_9STRA (PseudoU_synth_2 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NSK8_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.220e-33
Identity = 124/375 (33.07%), Postives = 169/375 (45.07%), Query Frame = 0
Query:   64 GASRQCGDIPTETLSLDDDFVIINKPADVRMDGDFDVTVEKLIRHWSPTLEGKPLKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKIYLAVVQGAL--------DAEGVPRRE-------------EEPDGWGEGRDGGGGRKRRPD---SVQHTPAHGFFQRKKDKLLRAAE---LGET-----------LSAEDATFSKLSWGDIKFDKLASRSFHAAAKEDKIRAVAAAQEALFGTAQGAPDRGVFRA-------PSDGPGAFRVDASVSEV---PGDFTMRLDEKAGGKGKPSRTFVQVLEKGSYRGQAVTKVLFRPHTGRRHQLRLHALHMGHPILGDTTYGEVDHTVPRMCLHAQSLRLRLAP 390
            G  R    +    L  D  FV++NK  D RMDG FDVT+EK +    P +     +W+HQLDFATSGVL V   +EA A GC  FRE++ +K YLAVV+G L        D  GV  +              EE +     + G    ++  D     +H P    F  ++ +LLR ++    GE            L+  +  F+K++W D+  ++    ++   AK DK R +    E L         +  +             P A+  DA + E     G F M +  +     K S T   VL    Y+G+ VTKVL RP  GRRHQLRLH    G PI GD TYG  +   PRM LHA  + LR  P
Sbjct:   67 GGPRTLEQLQLRVLVRDQHFVVLNKGPDERMDGAFDVTIEKALARDFPDVS--KFRWIHQLDFATSGVLVVGATKEATATGCRLFREKQVQKEYLAVVRGHLPFNPVDSVDRLGVIAKACTFSKLGLLIQDMEEMERLRNQQRGTRTHQKMADYPRGARHGP--NLFTMEQAQLLRESQGDPRGEVRGAGAGAGARELTPAELAFTKMTWHDLTQEE--KDAYTERAKADKQRFLCEFSEFLSKEKVRLARKRKYECLDHEENEEKTEPVAYIFDAPIIEPHRSTGVFRMEVGTETNTTAKQSTTIAFVLGHAMYKGEPVTKVLLRPLNGRRHQLRLHLARHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRSRP 435          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig157.91.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3V5_9PHAE5.750e-22271.52PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
A0A8K1CQW5_PYTOL9.630e-4234.03Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W2Q6J3_PHYPN1.630e-4135.48PseudoU_synth_2 domain-containing protein n=16 Tax... [more]
A0A329SUS2_9STRA6.870e-3934.57PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
A0A225VLR7_9STRA1.060e-3834.71Pseudouridine synthase n=1 Tax=Phytophthora megaka... [more]
A0A7S2RMN8_9STRA1.760e-3832.28Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A0P1AWK8_PLAHL3.110e-3835.11Rna pseudouridylate synthase-like protein n=1 Tax=... [more]
A0A833WT58_PHYIN2.600e-3533.33RNA pseudouridylate synthase n=3 Tax=Phytophthora ... [more]
A0A484EHY7_BRELC9.290e-3434.23HMG box domain-containing protein n=1 Tax=Bremia l... [more]
A0A6A3NSK8_9STRA1.220e-3333.07PseudoU_synth_2 domain-containing protein n=3 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 66..219
e-value: 6.1E-19
score: 70.4
coord: 268..399
e-value: 8.2E-21
score: 76.6
NoneNo IPR availablePIRSRPIRSR606225-1PIRSR606225-1coord: 73..167
e-value: 1.7E-14
score: 51.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 407..445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..204
NoneNo IPR availablePANTHERPTHR21600:SF41RNA PSEUDOURIDYLATE SYNTHASE DOMAIN-CONTAINING PROTEIN 1coord: 80..167
coord: 310..387
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 80..167
coord: 310..387
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 82..354
e-value: 4.3E-26
score: 91.9
IPR006145Pseudouridine synthase, RsuA/RluA-likeCDDcd02869PseudoU_synth_RluA_likecoord: 83..386
e-value: 1.02591E-31
score: 118.209
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 79..387

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig157contigP-littoralis_Contig157:443904..455891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig157.91.2mRNA_P-littoralis_Contig157.91.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig157 443228..455992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig157.91.2 ID=prot_P-littoralis_Contig157.91.2|Name=mRNA_P-littoralis_Contig157.91.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=487bp
MLTTGWAYQQQVLCGGTTTWLISSSNFMMAMMRRPPVRCQALADSMLSST
GARKGLAITQRCLGASRQCGDIPTETLSLDDDFVIINKPADVRMDGDFDV
TVEKLIRHWSPTLEGKPLKWVHQLDFATSGVLCVALHREAAARGCEAFRE
RRARKIYLAVVQGALDAEGVPRREEEPDGWGEGRDGGGGRKRRPDSVQHT
PAHGFFQRKKDKLLRAAELGETLSAEDATFSKLSWGDIKFDKLASRSFHA
AAKEDKIRAVAAAQEALFGTAQGAPDRGVFRAPSDGPGAFRVDASVSEVP
GDFTMRLDEKAGGKGKPSRTFVQVLEKGSYRGQAVTKVLFRPHTGRRHQL
RLHALHMGHPILGDTTYGEVDHTVPRMCLHAQSLRLRLAPPTKAAAAAAA
GPAAAARTQAQQHGSEGAATAAVTAPVTAGAGSQGGETPRGKRYWGRQAV
RPAAAVAGLGEGGEGEVVLDVVAPDPFVFVNGELQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf