prot_P-littoralis_Contig157.87.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig157.87.2
Unique Name	prot_P-littoralis_Contig157.87.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	1045

Homology

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BLAST of mRNA_P-littoralis_Contig157.87.2 vs. uniprot
Match: D7FMB4_ECTSI (RRM_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMB4_ECTSI)

HSP 1 Score: 754 bits (1946), Expect = 6.300e-258
Identity = 567/1065 (53.24%), Postives = 594/1065 (55.77%), Query Frame = 0

Query:    1 MPEGDG----TSRGSPEMAPHPDQYHSSASSMVPQRVPPALFCSSQQTPHRVQSSTNLDLVDCVGSDLLLAMNNLDVNSXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLPLPGDG--------------FLPLAALAPPPSRQPAWLPSQQQKARVQNEHFTSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSSSGRDVGAMRMGRLCDDGNSNGVGGPASREQQQAYDSYPQGSSVGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHLDESWTAVLNAPAGAELMEFLMERPSRAMVLWNVEAIGEGDLRAACEVHGPLYYLRAEHRRKRVIFVAYYDVRDAVNAHRCLGAELSQ-YLMNEPGSRPRPAVHFSIELHAGFSYKEGSVVVHDLPAQATEAEVGSVFQAYGDLRDITRHSNPHQPHSASFSVEFCSIQDARVAAQELTVRNPWGHGITVEPAVRSETERALGRQLHATLNRWTSESTQATDDRMRSGSSSVVMSARSSGSDSPPLNKSEERAGRDMGYAMDLFTPMTSANTTPAXXXXXXXPSGADACQDGGGRSPGVQHYITMPLRQHYSGSAGAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSSGSGHXXXXLLXXXXLSNXXHVHGRDXXXXXXXPNGYFLDTSPGYPGDRDDTRTPPAPMWAASPLSLSPPSARGXXXXXAMRGSPPLRGMPGGCAGGPGGLGYGD-RSRQFSLDEGRLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPECNGNGGHEFSLDLKKVSKGMDKRTTIMVRNIPNKYTQTMLLQEIDASYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSAGAERGRPEPFPASSKAYRGVM-PQSGGGMFGGVRDRERSTSNSSSLSMA 1044
            MP GDG     SRGSP  A   DQY SS S MV QR PP    ++QQTPHRVQSSTNLDLVDCVGSDLLLAMNNLDV                                  PG G               LPLA      +RQP+WL +QQQ+ARVQNEHF S S             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       S G   P               SSVGS                                                      XXXXXXXXXXXXXXXXXXXXXXXX   PHLDESWTAVLNAPAGAELMEFL ERPSRA+VLWNVEAIGE +LRAACE HGPLYYLRAEHRRKRVIFVAYYDVRDAVNAHR LGAELS  YLM+E G+RPRPAVHFSIELHAGFSYKEGSVV HDLPAQ TEAEVGSVFQ YGDLR + +H      H +SFSVEFCSIQDARVAAQELTVRNPWGHGITVEPAVRSE E+ALG++LHATLNRWT+ESTQ  +DRMRS SSS+VMS RSS SDSPP                                                                                                                                                                                           RTP   + A+ P                MRGSPPLRGMPGGCAG  GGLGY D R+RQ SLDE RL      XXXXXXX                        PEC+GNGGHEFSLDLKKVSKGMDKRTTIMVRNIPNKYTQ MLLQEID+SYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHS G ERGRPEPFPASSKAYR V+ P  GGG   GVRDRERS SNSS+LSM+
Sbjct:    1 MPAGDGLGDDASRGSPSSA--ADQYSSSVSVMVSQRPPPVF--AAQQTPHRVQSSTNLDLVDCVGSDLLLAMNNLDVGEQQARACANLANNGCHHGLLEGG----------PGAGSPXXXXXXXXXXXXXLPLAXXXXXXARQPSWLTAQQQQARVQNEHFPSSSRGSLYGCDSGEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGSPGALPPPGFGLDSC-------SSVGS-----------------------------------------------WNGSTNSXXXXXXXXXXXXXXXXXXXXXXXXGGNPHLDESWTAVLNAPAGAELMEFLTERPSRALVLWNVEAIGEDELRAACEGHGPLYYLRAEHRRKRVIFVAYYDVRDAVNAHRSLGAELSSNYLMDEHGARPRPAVHFSIELHAGFSYKEGSVVAHDLPAQVTEAEVGSVFQVYGDLRRVAQH----HAHPSSFSVEFCSIQDARVAAQELTVRNPWGHGITVEPAVRSEAEKALGKKLHATLNRWTAESTQVYEDRMRSSSSSIVMSGRSSDSDSPPPKPE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RTPTRMVEASRP------------ECGGMRGSPPLRGMPGGCAG-AGGLGYKDVRTRQMSLDEARLQHGNSGXXXXXXXRTVRCNSDSSSQILMAASSPHSAGPECSGNGGHEFSLDLKKVSKGMDKRTTIMVRNIPNKYTQMMLLQEIDSSYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSTGPERGRPEPFPASSKAYRAVLAPGGGGGGVFGVRDRERSVSNSSALSMS 797

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BLAST of mRNA_P-littoralis_Contig157.87.2 vs. uniprot
Match: A0A836C7Y7_9STRA (RNA recognition motif 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Y7_9STRA)

HSP 1 Score: 250 bits (639), Expect = 1.280e-73
Identity = 116/153 (75.82%), Postives = 137/153 (89.54%), Query Frame = 0

Query:  866 EFSLDLKKVSKGMDKRTTIMVRNIPNKYTQTMLLQEIDASYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSAGAERGRPEPFPASSKAYRGVMP 1018
            EF+LD+ K++KG+DKRTTIM+RNIPNKYTQ MLLQEI+ ++  A+DFFYLPIDFKN+CNVGYAFINF+D+RRI+ F REF+ QRW+NFNSEKVCAISYARIQGKASMI RFQNSSLMEKDGEYRPL+F+S+G +RGRPEPFP  +K  R V P
Sbjct:    8 EFALDIGKIAKGLDKRTTIMIRNIPNKYTQAMLLQEINVNFLEAFDFFYLPIDFKNRCNVGYAFINFIDFRRIIAFTREFHGQRWRNFNSEKVCAISYARIQGKASMICRFQNSSLMEKDGEYRPLLFYSSGPDRGRPEPFPLGTKQRRIVTP 160

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BLAST of mRNA_P-littoralis_Contig157.87.2 vs. uniprot
Match: A0A836CK27_9STRA (RNA recognition motif 2-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK27_9STRA)

HSP 1 Score: 229 bits (583), Expect = 1.490e-66
Identity = 106/125 (84.80%), Postives = 118/125 (94.40%), Query Frame = 0

Query:  869 LDLKKVSKGMDKRTTIMVRNIPNKYTQTMLLQEIDASYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIF 993
            LD KK++KG D+RTTIM+RNIPNKYTQ MLLQEIDA++RG YDFFYLPIDFKN+CNVGYAFINF+D+RRIV F REF+ QRW+NFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPL+F
Sbjct:    1 LDTKKIAKGQDRRTTIMIRNIPNKYTQAMLLQEIDANFRGGYDFFYLPIDFKNRCNVGYAFINFIDFRRIVSFTREFHGQRWRNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLLF 125

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BLAST of mRNA_P-littoralis_Contig157.87.2 vs. uniprot
Match: A0A7S2V2F9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2F9_9STRA)

HSP 1 Score: 224 bits (571), Expect = 3.410e-64
Identity = 103/149 (69.13%), Postives = 126/149 (84.56%), Query Frame = 0

Query:  866 EFSLDLKKVSKGMDKRTTIMVRNIPNKYTQTMLLQEIDASYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSAGAERGRPEPFPASSKAYR 1014
            +F LD+K+V    D+RTT+MVRNIPNKYTQ MLLQEI+ +++  YDFFYLPIDFKNKCNVGYAFINF+    IV F+ EFN ++WKNFNSEKVC ISYARIQGK+SMISRFQNSSLM+KDGE++PL+FHS+G+ +G+PE FP + K  R
Sbjct:   20 DFKLDVKRVLARSDQRTTVMVRNIPNKYTQQMLLQEINVNHKETYDFFYLPIDFKNKCNVGYAFINFISPLSIVEFYEEFNGRKWKNFNSEKVCCISYARIQGKSSMISRFQNSSLMDKDGEFQPLLFHSSGSNKGKPEKFPIAGKTKR 168

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BLAST of mRNA_P-littoralis_Contig157.87.2 vs. uniprot
Match: A0A7S2BIN8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BIN8_9STRA)

HSP 1 Score: 229 bits (584), Expect = 9.070e-63
Identity = 106/167 (63.47%), Postives = 133/167 (79.64%), Query Frame = 0

Query:  860 NGNGGH-----EFSLDLKKVSKGMDKRTTIMVRNIPNKYTQTMLLQEIDASYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSAGAERGRPEPFPASSKAYRGVMPQSG 1021
            +GNG H     EF L++  + +G+D+RTT+M+RNIPNKYTQ  +L+EI+  ++G YDFFYLPIDFKNKCNVGYAFINF+++R IVPF  +++ +RW NFNSEKVCAI+YARIQGKASMISRFQNSSLM+K GE+RPL+F S G  RG PEPFPA S+ +     Q G
Sbjct:  246 DGNGSHAIGDGEFGLNIDHIMQGVDRRTTVMIRNIPNKYTQMAVLEEINQHFKGTYDFFYLPIDFKNKCNVGYAFINFIEFRAIVPFVCKYHGRRWNNFNSEKVCAITYARIQGKASMISRFQNSSLMDKSGEFRPLLFQSTGVNRGLPEPFPACSQKFNNKSKQRG 412

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BLAST of mRNA_P-littoralis_Contig157.87.2 vs. uniprot
Match: A0A4D9D2V8_9STRA (RRM domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2V8_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.380e-62
Identity = 111/151 (73.51%), Postives = 135/151 (89.40%), Query Frame = 0

Query:  863 GGHEFSLDLKKVSKGMDKRTTIMVRNIPNKYTQTMLLQEIDASYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSAGAERGRPEPFPASSKAY 1013
            G  EF LD++++  GMD+RTTIMVRN+PNKY+Q +LL EI+A+++G YDFFYLPIDFKNKCNVGYAFINF++ + IVPFF+EFN QRW+NFNSEKVCAISYARIQGK SMISRF NSSLMEKDGEYRPL+F+S+G +RG+PEPFP+S K +
Sbjct: 1103 GDTEFHLDVERILMGMDRRTTIMVRNVPNKYSQQLLLNEINATHKGKYDFFYLPIDFKNKCNVGYAFINFIEPKAIVPFFKEFNGQRWRNFNSEKVCAISYARIQGKQSMISRFSNSSLMEKDGEYRPLLFYSSGPDRGKPEPFPSSLKHH 1253

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BLAST of mRNA_P-littoralis_Contig157.87.2 vs. uniprot
Match: A0A7S2SS48_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS48_9STRA)

HSP 1 Score: 239 bits (610), Expect = 2.570e-62
Identity = 110/151 (72.85%), Postives = 132/151 (87.42%), Query Frame = 0

Query:  860 NGNGGHEFSLDLKKVSKGMDKRTTIMVRNIPNKYTQTMLLQEIDASYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSAGAERGRPEPFPASS 1010
            +G    EFSL++ +V +G D+RTT+MVRNIPNKYTQ  +L+EI+ +++G YDFFYLPIDFKNKCNVGYAF+NF+D+R IV FF +FN +RW NFNSEKVCAI+YARIQGK SMISRFQNSSLMEKDGEYRPL+FHS+G E+GRPEPFP SS
Sbjct:  721 HGREDSEFSLNIDRVMQGSDRRTTLMVRNIPNKYTQAAVLEEINENFQGLYDFFYLPIDFKNKCNVGYAFMNFIDFRSIVSFFCKFNGRRWNNFNSEKVCAITYARIQGKTSMISRFQNSSLMEKDGEYRPLLFHSSGPEKGRPEPFPTSS 871

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BLAST of mRNA_P-littoralis_Contig157.87.2 vs. uniprot
Match: A0A482RU13_9ARCH (RRM domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU13_9ARCH)

HSP 1 Score: 215 bits (548), Expect = 5.300e-61
Identity = 95/151 (62.91%), Postives = 127/151 (84.11%), Query Frame = 0

Query:  861 GNGGHEFSLDLKKVSKGMDKRTTIMVRNIPNKYTQTMLLQEIDASYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSAGAERGRPEPFPASSK 1011
            G G  +F+LDL+++  G + RTT+MVRNIPNKY+Q MLL+E++A ++G YDFFYLPIDFKN+CNVGYAFINF+    IV F R F  QRW++FNSEK+C+++YARIQGKA+++SRFQNSSL++KD  Y+PL+F S+G ++G+PEPFPA SK
Sbjct:   24 GEGVGDFALDLQRLQDGSETRTTLMVRNIPNKYSQQMLLEEVNAQHQGQYDFFYLPIDFKNRCNVGYAFINFLSPLHIVDFVRRFEGQRWRSFNSEKICSVTYARIQGKAALVSRFQNSSLLDKDDTYKPLLFRSSGPDQGQPEPFPAPSK 174

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BLAST of mRNA_P-littoralis_Contig157.87.2 vs. uniprot
Match: A0A7S3Y2P3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2P3_HETAK)

HSP 1 Score: 213 bits (543), Expect = 2.950e-60
Identity = 98/147 (66.67%), Postives = 119/147 (80.95%), Query Frame = 0

Query:  862 NGGHEFSLDLKKVSKGMDKRTTIMVRNIPNKYTQTMLLQEIDASYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSAGAERGRPEPFPA 1008
            N   E+SL+++++  G D RTT+MVRNIPNKYTQ MLL EI+A + G YDFFYLPIDFKN+CNVGYAF+NF+  R I  F R F+ QRW  FNSEKVCAI+YAR+QG+ +MI+RFQNSSL+ K+G YRPL+FHSAG   GRPEPFPA
Sbjct:   22 NPSPEYSLNMQQILDGADLRTTVMVRNIPNKYTQQMLLDEINAEFEGTYDFFYLPIDFKNRCNVGYAFVNFLSARTIPAFHRRFDGQRWGTFNSEKVCAIAYARLQGRRAMIARFQNSSLLAKEGRYRPLLFHSAGPLAGRPEPFPA 168

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BLAST of mRNA_P-littoralis_Contig157.87.2 vs. uniprot
Match: A0A3R7KLF4_9STRA (RRM_2 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KLF4_9STRA)

HSP 1 Score: 216 bits (551), Expect = 2.010e-58
Identity = 101/149 (67.79%), Postives = 122/149 (81.88%), Query Frame = 0

Query:  860 NGNGGHEFSLDLKKVSKGMDKRTTIMVRNIPNKYTQTMLLQEIDASYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSAGAERGRPEPFPA 1008
            N  G  EFSL +++V+ G D RTT+M+RNIPNKYTQ MLL EI+ ++RG YDFFYLPIDFKNKCN+GYAFINF++   I  F REF+ Q+W NFNSEKVCAISYAR+QGK +MI+RFQNSSL+EK   YRPL+F S+G  RG+PEPFPA
Sbjct:  224 NDQGTGEFSLSIERVASGEDMRTTLMIRNIPNKYTQQMLLAEINRNHRGNYDFFYLPIDFKNKCNMGYAFINFIEAAHIEAFHREFDGQKWTNFNSEKVCAISYARLQGKQAMIARFQNSSLLEKHESYRPLVFGSSGPNRGKPEPFPA 372

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig157.87.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig157.87.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FMB4_ECTSI	6.300e-258	53.24	RRM_2 domain-containing protein n=2 Tax=Ectocarpus...	[more]
A0A836C7Y7_9STRA	1.280e-73	75.82	RNA recognition motif 2-domain-containing protein ...	[more]
A0A836CK27_9STRA	1.490e-66	84.80	RNA recognition motif 2-domain-containing protein ...	[more]
A0A7S2V2F9_9STRA	3.410e-64	69.13	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S2BIN8_9STRA	9.070e-63	63.47	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A4D9D2V8_9STRA	1.380e-62	73.51	RRM domain-containing protein n=2 Tax=Monodopsidac...	[more]
A0A7S2SS48_9STRA	2.570e-62	72.85	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A482RU13_9ARCH	5.300e-61	62.91	RRM domain-containing protein (Fragment) n=1 Tax=a...	[more]
A0A7S3Y2P3_HETAK	2.950e-60	66.67	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A3R7KLF4_9STRA	2.010e-58	67.79	RRM_2 domain-containing protein n=3 Tax=Phytophtho...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007201	Mei2-like, C-terminal RNA recognition motif	PFAM	PF04059	RRM_2	coord: 881..977 e-value: 4.1E-44 score: 148.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 438..523 e-value: 7.1E-6 score: 28.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 587..606
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 530..568
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1017..1044
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 687..810
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 687..704
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 635..668
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 528..668
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 707..721
None	No IPR available	PANTHER	PTHR23189	RNA RECOGNITION MOTIF-CONTAINING	coord: 332..587
None	No IPR available	PANTHER	PTHR23189	RNA RECOGNITION MOTIF-CONTAINING	coord: 866..1009
None	No IPR available	PANTHER	PTHR23189:SF98	PROTEIN MEI2-LIKE 4	coord: 866..1009 coord: 332..587
IPR034454	MEI2-like, RNA recognition motif 3	CDD	cd12531	RRM3_MEI2_like	coord: 884..969 e-value: 4.4641E-54 score: 180.669
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 440..523
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 883..967

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig157	contig	P-littoralis_Contig157:428581..437730 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig157.87.2	mRNA_P-littoralis_Contig157.87.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig157 428350..439260 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig157.87.2 ID=prot_P-littoralis_Contig157.87.2|Name=mRNA_P-littoralis_Contig157.87.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1045bp
MPEGDGTSRGSPEMAPHPDQYHSSASSMVPQRVPPALFCSSQQTPHRVQS
STNLDLVDCVGSDLLLAMNNLDVNSSSSSSSANGHHRHHLLDGGNGGGGG
GGSPLPLPGDGFLPLAALAPPPSRQPAWLPSQQQKARVQNEHFTSRSSSG
GGNGNNSCSGGGGVFRGRSNNSYDSGEEVACDGHHHHNHHQLRSSSGRDV
GAMRMGRLCDDGNSNGVGGPASREQQQAYDSYPQGSSVGSNNNNYSGSSS
PGMPPPGFGLESSTSSQASWSGSNNGSTNNTTNNGGGGVRRPSSASGGGS
SSSGTTPRTTNGNNNGDNNNNPHLDESWTAVLNAPAGAELMEFLMERPSR
AMVLWNVEAIGEGDLRAACEVHGPLYYLRAEHRRKRVIFVAYYDVRDAVN
AHRCLGAELSQYLMNEPGSRPRPAVHFSIELHAGFSYKEGSVVVHDLPAQ
ATEAEVGSVFQAYGDLRDITRHSNPHQPHSASFSVEFCSIQDARVAAQEL
TVRNPWGHGITVEPAVRSETERALGRQLHATLNRWTSESTQATDDRMRSG
SSSVVMSARSSGSDSPPLNKSEERAGRDMGYAMDLFTPMTSANTTPATTP
GSTPPSGADACQDGGGRSPGVQHYITMPLRQHYSGSAGAPSSSSSRGRSA
SGSGSLSAPPHPMYGSSSSSNNNNGCSCANGMPQHHFGNGNGNGNGSGSV
GSSGSGHHHHHLLHHHPLSNGHHVHGRDNGGGGGGPNGYFLDTSPGYPGD
RDDTRTPPAPMWAASPLSLSPPSARGGGGGGAMRGSPPLRGMPGGCAGGP
GGLGYGDRSRQFSLDEGRLLGGGGGGCGGARTMRSSSDSASQMMLASTHG
GGGGGVPECNGNGGHEFSLDLKKVSKGMDKRTTIMVRNIPNKYTQTMLLQ
EIDASYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRW
KNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSAGAER
GRPEPFPASSKAYRGVMPQSGGGMFGGVRDRERSTSNSSSLSMA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007201	Mei2-like_Rrm_C
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR034454	MEI2-like_RRM3
IPR035979	RBD_domain_sf