prot_P-littoralis_Contig157.86.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig157.86.1
Unique Nameprot_P-littoralis_Contig157.86.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length198
Homology
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BLAST of mRNA_P-littoralis_Contig157.86.1 vs. uniprot
Match: A0A6H5JIE2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIE2_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.250e-13
Identity = 63/154 (40.91%), Postives = 89/154 (57.79%), Query Frame = 0 
Query:    2 ISALQALPFASCATLETQQTGLRRSTRSRARSVRLRSPGEPPLALPDLHEC-SGRPSYSPTEVDSMVA--TPRTTPSSVISPEDDDDVQQVLSAGGDV-APSSAEVVSTATMPAFREALKLLSDPAALVRRQQDDPHLGQVCKDLSNEENRAGG 151
            +SAL+ALPFA+CA ++ ++   RRS R+R  SVRL    +  L L  + E    R +  PT V+S     +P T P S   P  DD + +VL+A G+V A SS++ +  A+  A     ++L+ P+ L  RQQDD HLGQV K LSN  + A G
Sbjct:  408 LSALRALPFAACAAVDPERDAARRSGRTRTPSVRLPPIDDAQLLLTSVLEAIPDREAIGPTTVESFAPAPSPSTLPPSPGRPGHDD-IGEVLAARGEVPASSSSQTIGRAS--AIDLTARILTKPSELAHRQQDDTHLGQVRKVLSNGVDLARG 558
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig157.86.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIE2_9PHAE2.250e-1340.91Integrase catalytic domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig157contigP-littoralis_Contig157:420625..421218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig157.86.1mRNA_P-littoralis_Contig157.86.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig157 420617..421274 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig157.86.1 ID=prot_P-littoralis_Contig157.86.1|Name=mRNA_P-littoralis_Contig157.86.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=198bp
MISALQALPFASCATLETQQTGLRRSTRSRARSVRLRSPGEPPLALPDLH
ECSGRPSYSPTEVDSMVATPRTTPSSVISPEDDDDVQQVLSAGGDVAPSS
AEVVSTATMPAFREALKLLSDPAALVRRQQDDPHLGQVCKDLSNEENRAG
GIRVTVIAWTTVECCGWNEKERNCQSFHCRWCPMLLPWCTCFTATQE*
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