mRNA_P-littoralis_Contig157.31.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig157.31.2 vs. uniprot
Match: D7G1B2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1B2_ECTSI) HSP 1 Score: 376 bits (966), Expect = 2.580e-113 Identity = 360/706 (50.99%), Postives = 417/706 (59.07%), Query Frame = 1
Query: 103 DTIYVVQRGETLAGVALKLGVKQSELKRANRMYGNKTLVAGQVLKINVPLNAQRQPEI-------PETAGGRANPPVQ-------------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAAE-------------FGSGTHMAAAXXXXXXXXXXXXXXXXXXXXXXXKAGASVREMFNYVRRRAAAVRNGSFYGDDTDADANAAGASAGTAAPSNHDYSNISRSSGGCVGDATGDGXXXXXXXXXXXXXGSPPTTPGVPAVNEGL-----PPAELWGGEREDAAAXXXXXXXXGAXXXXXXXNVAHCAAA---ARDMTSLSYAAAP------QRTAWEVSDDASRRSAGQALLSSSMGAGRSRG---RRLTIPKRVIQSTCKLRSTTYSNGYADYA------PGVARGTGASAAATAAASVPLKLPRLVSGGSTIVTHSTLARMEAAQPKHHRGYNWHLLFSSYRDGASYMTLYNRIKAEDPTFLIVEDMKGEVFGGFAASAWASGHQYYGTGESFLFKINGGRVTAE-----TDKDGPDDNASHTSGGSXXXXXXXXXXXXXXXXXKTLMEGDMTTYGWTGMNMYLQYSDEAGIGMGGGGVEGSFGLFLGEDFLSGSTGTCDTYGNPPLCSETQFQVSQVEVWGFTTADTEMGARLERLRKTLRGKTTRPL 2001
D+ YVVQRG+TLAGVAL+LGVKQSELKRAN M+G++TLVAGQVLK P+ + + +I P A R + V A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A E + XXXXXXXXXXXXXXXXXXX A ASVR MFNY+R +A ISR + + XXXXXXXXXXXX S P+TPG P+V+EGL PPAE+W G RED N A AAA ARD++ ++ + A + + W + AG++ + G RG R +++P S + AD A PGV + A PL+LP LV GGSTIVTH+TLARMEAAQPKHHRGYNW+LL+S++RDGASY TLYNRI+ E+PTFLIVE M+GEVFGGFA SAW+SG QYYGTGE FLFK+ G RVT E T+ D D +A +G S KTL+EGD+T +GWTGMNMYLQYSD GI MGGGG +GSFGLF+GEDFL+GSTG CDTYGNPPLCS+ QFQVSQVEVWGFTTADTEMGARLERLRKTLRGKTTRPL
Sbjct: 13 DSSYVVQRGDTLAGVALRLGVKQSELKRANSMFGSRTLVAGQVLKTRGPVKSASKEKIVYPVPAEPLPAAQRKSGSVSEAXXXXXXXXXXXXXXXXXMTTPGIAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVEEAMVRSAVPGELLYEPPHXXXXXXXXXXXXXXXXXXXXXXXXDASTSAAASVRGMFNYIRSKAXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXKISRRNSR----QSXXXXXXXXXXXXXXXGCSMPSTPGFPSVDEGLAPAGLPPAEMWAGTREDPG------------------NAAAFAAAQSAARDVSEVAQSTAQAFLSMVKPSYWRSDSEGGGGPAGESPVGFGDGRRGERGGSDRWVSVPGGAGSFEETASSGPILHSLADDASLFPGDPGVRP-------SPPPAEAPLQLPGLVCGGSTIVTHTTLARMEAAQPKHHRGYNWYLLYSTFRDGASYTTLYNRIQGEEPTFLIVESMRGEVFGGFATSAWSSGCQYYGTGECFLFKMEGERVTVESEEEQTENDSDDRSADGRTGSSETVAAS-----------KTLLEGDLTAFGWTGMNMYLQYSDGKGIAMGGGGADGSFGLFIGEDFLTGSTGKCDTYGNPPLCSQEQFQVSQVEVWGFTTADTEMGARLERLRKTLRGKTTRPL 672
BLAST of mRNA_P-littoralis_Contig157.31.2 vs. uniprot
Match: F0Y8Q9_AURAN (TLDc domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8Q9_AURAN) HSP 1 Score: 127 bits (320), Expect = 5.100e-29 Identity = 82/235 (34.89%), Postives = 114/235 (48.51%), Query Frame = 1
Query: 1297 STIVTHSTLARMEAAQPKHHRGYNWHLLFSSYRDGASYMTLYNRIKAEDPTFLIVEDMKGEVFGGFAASAWASGHQYYGTGESFLFKI----NGGRV------TAETDKDGPDDNASHTSGGSXXXXXXXXXXXXXXXXXKTLMEGDMTTYGWTGMNMYLQYSDEAGIGMGGGGVEGSFGLFLGEDFLSGSTGTCDTYGNPPLCSETQFQVSQVEVWGFTT-ADTEMGARLERLR 1968
S I+T + +A +E + P RGYNW L+S + GA+ T Y R++ E T ++ E GE+ GG+ + W G +YYGTG+SFLFK +G R+ + D PDD+ S + WTG N Y E+ I MG SFG FL +DF GS+G +TYGNPPL + ++F V E WGFTT D + A+ +R R
Sbjct: 52 SDILTPAHVAALEPSLPATLRGYNWRQLYSLQQHGANAGTFYARVQFESRTLVVAETSAGEILGGYTNAVWRPGAEYYGTGQSFLFKPRRTPDGRRIWRSRGHILDIIPDPPDDDGPRVS-----------------------------CFPWTGANNYFMMCSESSIAMGX--XXXSFGFFLDDDFSRGSSGPSETYGNPPLAASSEFDVVNFECWGFTTHVDADAAAKEDRCR 255
BLAST of mRNA_P-littoralis_Contig157.31.2 vs. uniprot
Match: A0A4D9DBE4_9STRA (TLDc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBE4_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.490e-25 Identity = 73/224 (32.59%), Postives = 107/224 (47.77%), Query Frame = 1
Query: 1297 STIVTHSTLARMEAAQPKHHRGYNWHLLFSSYRDGASYMTLYNRIKAEDPTFLIVEDMKGEVFGGFAASAWA-----SGHQYYGTGESFLFKINGGRVTAETDKDGPDDNASHTSGGSXXXXXXXXXXXXXXXXXKTLMEGD----------MTTYGWTGMNMYLQYSDEAGIGMGGGGVEGSFGLFLGEDFLSGSTGTCDTYGNPPLCSETQFQVSQVEVWGF 1923
S I+ + +++ P ++GY+W+L FS +DG+S+ T Y ++K+ PT L++ + EVFGGF + WA +G YYGTGESFL+K+ SH S GS G+ + + WT N Y S E +GMGGGG G FGLF+G++FL GS+G +T+ N PL F++ E W
Sbjct: 72 SEILNKKDVEELDSLLPTMYQGYSWNLRFSLDKDGSSFQTFYRQVKSVSPTILVIRSKENEVFGGFTTTPWAVHTTAAGPLYYGTGESFLYKVR----------------PSHRSQGSSLSISENGIFNAEDEEEDLKRPGENEKSSTRRKMIQFFPWTRENTYYMLSTENSLGMGGGG--GEFGLFIGDNFLFGSSGESETFYNAPLARHKTFEILSFECWSL 277
BLAST of mRNA_P-littoralis_Contig157.31.2 vs. uniprot
Match: A0A7S3ZWS0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWS0_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.330e-22 Identity = 74/214 (34.58%), Postives = 100/214 (46.73%), Query Frame = 1
Query: 1297 STIVTHSTLARMEAAQPKHHRGYNWHLLFSSYRDGASYMTLYNRIKAEDPTFLIVEDMKGEVFGGFAASAWASGHQYYGTGESFLFKINGGRVTAETDKDGPDDNASHTSGGSXXXXXXXXXXXXXXXXXKTLMEGDMTTYGWTGMNMYLQYSDEAGIGMGGGGVEGSFGLFLGEDFLSGSTGTCDTYGNPPLCSETQFQVSQVEVWGFTTADT 1938
S I+ + A + P +GYN LL+S + GA T Y R + + T + ++ +GEVFGG+ W +YYGTG+SFL+ R T + D P S G S ++ YGWTG N Y + + MGGG GSFG + EDF G++GT +TY NP L S F+V E WGFTT T
Sbjct: 74 SHILDDALAAALSNKLPDTLKGYNLKLLYSLQQHGADPGTFYARCQFDHRTLIAIQTTRGEVFGGYMTMPWRPSEEYYGTGQSFLW-----RKTNKCDIKRP---GSLLRGFSSSPRQKRIT--------------NVEVYGWTGNNSYFALCSDRSVAMGGG---GSFGFLVEEDFSRGTSGTSETYNNPQLSSAPDFEVVNFECWGFTTCAT 262
BLAST of mRNA_P-littoralis_Contig157.31.2 vs. uniprot
Match: A0A6U0TZV2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TZV2_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.050e-21 Identity = 79/243 (32.51%), Postives = 110/243 (45.27%), Query Frame = 1
Query: 1303 IVTHSTLARMEAAQPKHHRGYNWHLLFSSYRDGASYMTLYNRIKAEDPTFLIVEDMKGEVFGGFAASAWA-----SGHQYYGTGESFLFKINGGRVTAETDKDGPDDNASHTSGGSXXXXXXXXXXXXXXXXXKTLMEGDMTTYGWTGMNMYLQYSDEAGIGMGGGGVEGSFGLFLGE-----DFLSGSTGTCDTYGNPPLC--SETQFQVSQVEVWGFTTADTEMGARLERLRKTLRGKTTR 1995
IVT + + P R +NW LL+S GAS+ TL R+K + T L+V GEVFGGFA W QYYG+G+SFLF++N + +DG ++ + W+G N Y Q S + + G GG SFGL++G D SGS+G CDTY N PL S F + ++E+W T A TE+ A E + R + +R
Sbjct: 193 IVTEEIMLHVSRCLPALVRMHNWKLLYSMRSHGASFSTLARRVKMYENTLLVVHTTNGEVFGGFATRPWEFKVEEKDAQYYGSGQSFLFRVN---EELQDQEDGI-----------------------------VQFWERVSVFPWSGRNSYFQLSSKNSLAFGAGGA--SFGLYIGRNGRGYDLASGSSGACDTYANEPLAPVSGPDFDIVELEMWAPTKAHTELEAHSEGPPQPRRNRRSR 401
BLAST of mRNA_P-littoralis_Contig157.31.2 vs. uniprot
Match: A0A6B2LKV8_9EUKA (TLDc domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LKV8_9EUKA) HSP 1 Score: 102 bits (255), Expect = 1.490e-21 Identity = 63/186 (33.87%), Postives = 83/186 (44.62%), Query Frame = 1
Query: 1366 NWHLLFSSYRDGASYMTLYNRIKAEDPTFLIVEDMKGEVFGGFAASAWASGHQYYGTGESFLFKINGGRVTAETDKDGPDDNASHTSGGSXXXXXXXXXXXXXXXXXKTLMEGDMTTYGWTGMNMYLQYSDEAGIGMGGGGVEGSFGLFLGEDFLSGSTGTCDTYGNPPLCSETQFQVSQVEVWGF 1923
+W LLF + DG S ++ Y + + DPT L+VED KG VFG F W YYGTGESFLFK+ K L + + WTG N Y YS++ I +GGG G GL+LG D+ G + DT+ N PL +F + VE+W F
Sbjct: 21 DWELLFCTSTDGISMLSFYLKTRDADPTLLVVEDKKGHVFGAFVTEPWEKQKGYYGTGESFLFKLR----------------------------------------PKELSD----VWRWTGRNTYFMYSNDNSISVGGG--RGQHGLWLGNDWYDGISQCSDTFENKPLSYSEKFVIKTVEIWKF 160
BLAST of mRNA_P-littoralis_Contig157.31.2 vs. uniprot
Match: G4YTJ2_PHYSP (TLDc domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YTJ2_PHYSP) HSP 1 Score: 103 bits (258), Expect = 2.430e-21 Identity = 69/226 (30.53%), Postives = 97/226 (42.92%), Query Frame = 1
Query: 1270 KLPRLVSGGSTIV------THSTLARMEAAQPKHHRGYNWHLLFSSYRDGASYMTLYNRIKAEDPTFLIVEDMKGEVFGGFAASAWASGHQYYGTGESFLFKINGGRVTAETDKDGPDDNASHTSGGSXXXXXXXXXXXXXXXXXKTLMEGDMTTYGWTGMNMYLQYSDEAGIGMGGGGVEGSFGLFLGEDFLSGSTGTCDTYGNPPLCSETQFQVSQVEVWGFTT 1929
+LP+L+ G V S +A ++A+ R +NW LL+S +DG S TL + K +PT ++VE KG++FGGFA+ W YYG GESF+F N Y W+ +N + S++ I MGGG G F L D G++G T+ N L SE +F + VEVWGF T
Sbjct: 36 ELPKLIGGSKNEVLSNPRNASSLVAHLQASLAPSRRCHNWKLLYSLAQDGCSLHTLLLKAKKHNPTLVVVETTKGDIFGGFASEEWQDSANYYGIGESFVFSFN----------------------------------------------SKFECYPWSYLNTMIMLSNDECIAMGGG---GDFAWCLNSDLSRGTSGCSKTFENERLTSEAEFGIYNVEVWGFVT 212
BLAST of mRNA_P-littoralis_Contig157.31.2 vs. uniprot
Match: A0A225WMC1_9STRA (TLDc domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WMC1_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.030e-20 Identity = 67/224 (29.91%), Postives = 99/224 (44.20%), Query Frame = 1
Query: 1270 KLPRLVSGGSTIVTHST-----LARMEAAQPKHHRGYNWHLLFSSYRDGASYMTLYNRIKAEDPTFLIVEDMKGEVFGGFAASAWASGHQYYGTGESFLFKINGGRVTAETDKDGPDDNASHTSGGSXXXXXXXXXXXXXXXXXKTLMEGDMTTYGWTGMNMYLQYSDEAGIGMGGGGVEGSFGLFLGEDFLSGSTGTCDTYGNPPLCSETQFQVSQVEVWGFT 1926
+LP+L+ G V +T + +++A+ R Y+W L+S + G S TL ++ E+PT ++VE KGE+FGGF + AW YYG GESF+F N Y W+ + + +S+E I MGGG G F L D G++G T+GN L +E++F + VEVWGFT
Sbjct: 36 ELPKLIGGSKNGVLSNTRNAALVPQLQASLSTARRCYDWKQLYSLTQHGCSLHTLLLKVHNENPTLVVVETTKGEIFGGFVSEAWRISGNYYGLGESFVFAFN----------------------------------------------AKFECYPWSCSDAMVMFSNEENIAMGGG---GGFAWCLNSDLSRGTSGCSTTFGNACLTTESEFGIVNVEVWGFT 210
BLAST of mRNA_P-littoralis_Contig157.31.2 vs. uniprot
Match: A0A7S4R8M2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R8M2_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.600e-20 Identity = 67/196 (34.18%), Postives = 95/196 (48.47%), Query Frame = 1
Query: 1369 WHLLFSSYRDGASYMTLYNRIKAEDPTFLIVEDMKGEVFGGFAASAWASGHQ------YYGTGESFLFKINGGRVTAETDKDGPDDNASHTSGGSXXXXXXXXXXXXXXXXXKTLMEGDMTTYGWTGMNMYLQYSDEAG--IGMGGGGVEGSFGLFLGEDFLSGSTGTCDTYGNPPLCSETQ-FQVSQVEVWGFTT 1929
W ++S RDG ++ + E T L+++ KG+VFGG+A +AW H+ +YG+ ++ LFK+ V+ + D N + G D+ Y WTG N Y+Q D I GGGG EGSFGL + +DF GSTG CDT+GN LC + + F V +E WGF T
Sbjct: 329 WKRVYSLLRDGDAFDAFLRLVHKEQRTLLVIKTSKGDVFGGYAETAWEVMHRRENSGGFYGSAQACLFKLLKKNVSNDDCATSADANGYNDDIGRQQLQN----------------SNDINVYRWTGRNRYIQLCDSTHKMIAFGGGGTEGSFGLTVEDDFRRGSTGYCDTFGNDALCHDGEDFDVIDLECWGFIT 508
BLAST of mRNA_P-littoralis_Contig157.31.2 vs. uniprot
Match: W7T6X3_9STRA (Tld family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6X3_9STRA) HSP 1 Score: 104 bits (260), Expect = 4.320e-19 Identity = 74/209 (35.41%), Postives = 106/209 (50.72%), Query Frame = 1
Query: 1264 PLKLPRLVSGGSTIVTH---STLARMEAAQPKHHRGYNWHLLFSSYRDGASYMTLYNRIKAEDPTFLIVEDMKGEVFGGFAASAW-ASGHQYYGTGESFLFKINGGRVTAETDKDGPDDNASHTSGGSXXXXXXXXXXXXXXXXXKTLMEGDMTTYGWTGMNMYLQYSD-EAGIGMGGGGVEGSFGLFLGEDFLSGSTGTCDTYGNPPL 1875
P +L + SG STI++ S L +E A P H+ Y W L++S +GAS T + + K ++PT L+++DM+G VFGGFA AW A G YYG GESF++ + G + GP K L E + YGW+ N Y Q S + G+ MGGG GSF LF+ + L+GS+G +T+ + L
Sbjct: 512 PPRLLGVPSGSSTILSSLPASQLLALEGALPPQHQDYAWRLVYSLAGNGASLTTFFKKAKDKEPTLLVLKDMQGGVFGGFATRAWSAKGESYYGDGESFVWSLVG--------EPGP----------------------------KGLGEAPLRKYGWSTENSYFQLSTAKDGLAMGGG---GSFALFVDPELLNGSSGPSETFFSSAL 681 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig157.31.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig157.31.2 >prot_P-littoralis_Contig157.31.2 ID=prot_P-littoralis_Contig157.31.2|Name=mRNA_P-littoralis_Contig157.31.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=652bp MIDPDEAFPIDVQEKLPDDTIYVVQRGETLAGVALKLGVKQSELKRANRMback to top mRNA from alignment at P-littoralis_Contig157:174404..185352- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig157.31.2 ID=mRNA_P-littoralis_Contig157.31.2|Name=mRNA_P-littoralis_Contig157.31.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10949bp|location=Sequence derived from alignment at P-littoralis_Contig157:174404..185352- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig157:174404..185352- >mRNA_P-littoralis_Contig157.31.2 ID=mRNA_P-littoralis_Contig157.31.2|Name=mRNA_P-littoralis_Contig157.31.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1956bp|location=Sequence derived from alignment at P-littoralis_Contig157:174404..185352- (Pylaiella littoralis U1_48)back to top |