mRNA_P-littoralis_Contig157.26.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig157.26.1
Unique NamemRNA_P-littoralis_Contig157.26.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig157.26.1 vs. uniprot
Match: A0A6H5KJS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS9_9PHAE)

HSP 1 Score: 466 bits (1200), Expect = 1.050e-146
Identity = 258/374 (68.98%), Postives = 297/374 (79.41%), Query Frame = 1
Query:    1 GMKVDALYRGGKRSYPGTIMIVNGDGTCDIAYDDGEREDSVKRSLITPTATPRGSPRLARQGSS-DSADGGAH-RQMAKGDRVEARYRGKGTKFYKGKISRVNSDDTFDIAYDDGEREIGIAAEHVRSLEPRS--RPGDDRGGGDKPATLMEGDKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQA-ERVGS-DRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQA-ERVGS-DRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQA-ERVGS-DRLEEGMKVEARYKGRSRYYPGRIARVHR 1092
            G KV+A +RG  R YPG I  VN DG+ +I Y DGE+E  V   LI            AR G++ D    GA  R + KGDRVEARYRGKGT+FYKGKISRVNSD T DI+YDDGE+EIGIAAEHVRSLE ++    G DRG       L EG KVEA+YKGRSRYYPGRI+RVHRDG+CDIDYDDGEKER+V+P+LVR +  G+  ER GS DRLEEGMKVEA+YKGRSRYYPGRI+RVHRDG+CDIDYDDGEKER+V+P+LVR +  G+  ER GS DRLEEGMKVEA+YKGRSRYYPGRI+RVHRDG+CDIDYDDGEKER+V+P+LVR +  G+  ER GS DRLEEGMKVEA+YKGRSRYYPGRI+RVHR
Sbjct:  649 GDKVEANFRGRGRFYPGRISRVNLDGSFNIDYSDGEKERGVTADLIR-----------ARGGTTRDEVRSGADTRVLEKGDRVEARYRGKGTRFYKGKISRVNSDQTLDISYDDGEKEIGIAAEHVRSLEAQTSGHGGGDRGRETSEVLLKEGMKVEAKYKGRSRYYPGRISRVHRDGSCDIDYDDGEKERLVDPSLVRVLESGKGGERTGSGDRLEEGMKVEAKYKGRSRYYPGRISRVHRDGSCDIDYDDGEKERLVDPSLVRVLESGKGGERTGSGDRLEEGMKVEAKYKGRSRYYPGRISRVHRDGSCDIDYDDGEKERLVDPSLVRVLESGKGGERTGSGDRLEEGMKVEAKYKGRSRYYPGRISRVHR 1011          
BLAST of mRNA_P-littoralis_Contig157.26.1 vs. uniprot
Match: D7G1B1_ECTSI (Calmodulin-like myosin-light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B1_ECTSI)

HSP 1 Score: 432 bits (1111), Expect = 5.580e-134
Identity = 229/367 (62.40%), Postives = 287/367 (78.20%), Query Frame = 1
Query:    1 GMKVDALYRGGKRSYPGTIMIVNGDGTCDIAYDDGEREDSVKRSLITPTATPRGSPRLARQGSSDSADGGAHRQMAKGDRVEARYRGKGTKFYKGKISRVNSDDTFDIAYDDGEREIGIAAEHVRSLEPRSRPGDDRGGGDKPATLMEGDKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGS-DRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGS-DRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGS-DRLEEGMKVEARYKGRSRYYPGRIARVHR 1092
            GMKV+A Y+G  R YPG I  V+ DG+CDI YDDGE+E  V  SL+    + +G     R G  D        ++ +G +VEA+Y+G+ +++Y G+ISR++ D + DI YDDGE+E  +    VR+LE  S  G+  G GD    L EG +VEA+YKGRSRYYPGRI+RVHRDG+CDIDYDDGEKER+V+P+LVR +   + ER GS DRLEEGM+VEA+YKGRSRYYPGRI+R+HRDG+CDIDYDDGEKER+V+P+LVR +   + ER GS DRLEEGMKVEA+YKGRSRYYPGRI+R+HRDG+CDIDYDDGEK+R+V+P+LVRA+  G+ ER GS DRLEEGM+VEA+YKGRSRYYPGRI+RVHR
Sbjct:   65 GMKVEAKYKGRSRYYPGRISRVHRDGSCDIDYDDGEKERLVDPSLVRALESGKGE----RTGGRD--------RLEEGMKVEAKYKGR-SRYYPGRISRIHRDGSCDIDYDDGEKERLVDPSLVRALE--SGKGERTGSGDH---LEEGMRVEAKYKGRSRYYPGRISRVHRDGSCDIDYDDGEKERLVDPSLVRVLESSKGERTGSGDRLEEGMRVEAKYKGRSRYYPGRISRIHRDGSCDIDYDDGEKERLVDPSLVRVLESSKGERTGSGDRLEEGMKVEAKYKGRSRYYPGRISRIHRDGSCDIDYDDGEKKRLVDPSLVRALESGKGERTGSGDRLEEGMRVEAKYKGRSRYYPGRISRVHR 413          
BLAST of mRNA_P-littoralis_Contig157.26.1 vs. uniprot
Match: A0A6H5JBA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA5_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 2.790e-99
Identity = 204/384 (53.12%), Postives = 254/384 (66.15%), Query Frame = 1
Query:    1 GMKVDALYRG-GKRSYPGTIMIVNGDGTCDIAYDDGEREDSVKRSLITPTATPRGSPRLARQGSSDSADGGAHRQMAKGDRVEARYRGKGTKFYKGKISRVNSDDTFDIAYDDGEREIGIAAEHVRSLE-PRSRPGDDRGGGDKPATLMEGDKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVG-----SDRLEEGMKVEARYKGR-SRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAV-------GDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERV-----GSDRLEEGMKVEARYKGR-SRYYPGRIARVH 1089
            G +V+  YRG G + Y G I  VN D T D+AYDDGE+E  +    +    + R +      GS           MAKGDRVE RYRGKGTKFYKGKISRVNSD TFD+AYDDGE+EIGIAAEHVRSL+ P S  G  RG G +  TLMEGDKVEA ++GR R+YPGRI+RV+ DGT +IDYDDGEKE  V   L+RA   G ++R       S RLE G +VEARY+GR +++Y G+I+RV+ D T D+ YDDGEKE  +    VR++       G G + R  +  L EG KVEA ++GR R+Y GRI+RV+ DGT +IDYDDGEKER V   L+RA   G A R      GS RLE G +VEARY+GR S++Y G+I+RV+
Sbjct: 1857 GDRVEVRYRGKGTKFYKGKISRVNSDATFDVAYDDGEKEIGIAAEHVRSFESQRNADENHVIGSG----------MAKGDRVEVRYRGKGTKFYKGKISRVNSDATFDVAYDDGEKEIGIAAEHVRSLDRPTSAGG--RGPGRRAPTLMEGDKVEANFRGRGRFYPGRISRVNVDGTFNIDYDDGEKEHGVTDDLIRASDRGSSQRDEGRSGQSSRLERGDRVEARYRGRGTKFYTGKISRVNSDATFDVSYDDGEKEIGIAAEHVRSLESPPSPGGRGGSGRARAPTLMEGDKVEANFRGRGRFYSGRISRVNLDGTFNIDYDDGEKERGVTDDLIRASDRGNAHRDEGRSGGSGRLERGDRVEARYRGRGSKFYKGKISRVN 2228          
BLAST of mRNA_P-littoralis_Contig157.26.1 vs. uniprot
Match: D8LEH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH4_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 3.790e-99
Identity = 200/383 (52.22%), Postives = 255/383 (66.58%), Query Frame = 1
Query:    1 GMKVDALYRG-GKRSYPGTIMIVNGDGTCDIAYDDGEREDSVKRSLITPTATPRGSPRLARQGSSDSADGGAHRQMAKGDRVEARYRGKGTKFYKGKISRVNSDDTFDIAYDDGEREIGIAAEHVRSLEPRSRPGDDRGGGDKPATLMEGDKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVG-----SDRLEEGMKVEARYKGR-SRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAV-------GDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERV-----GSDRLEEGMKVEARYKGR-SRYYPGRIARVH 1089
            G +V+A YRG G + Y G I  VN DGT DI+YDDGE+E  +    +      R +     +GS           M +GDRVEARYRG+GTKFYKGKISRVNSD TFDIAYDDGE+EIGIA EHVRSL+ R    D RG G + +TLM+GDKVEA ++GR R+YPGRI++V+ DGT +IDYDDGEKER V   L+RA   G + R       + RLE G +VEARY+GR +++Y G+++RV+ D T DI YDDGEKE  +    VR++       G G + R  +  L EG KVEA ++GR R+YPGRI RV+ DGT +IDYDDGEKER V   L+RA   G + R      GS RLE G +VEARY+GR +++Y G+I+RV+
Sbjct: 1783 GDRVEARYRGRGTKFYKGKISRVNSDGTFDISYDDGEKEMEIPAEHVRSLEPQRNADENDLRGSG----------MVRGDRVEARYRGRGTKFYKGKISRVNSDATFDIAYDDGEKEIGIAVEHVRSLD-RPASADGRGPGRRASTLMKGDKVEANFRGRGRFYPGRISKVNLDGTFNIDYDDGEKERGVTDDLIRASDRGSSHRDDGRSEQTSRLERGDRVEARYRGRGTKFYKGKVSRVNSDDTMDIAYDDGEKEIGIAAEHVRSLESAPSPSGRGGSGRGRAPTLVEGDKVEANFRGRGRFYPGRIGRVNLDGTFNIDYDDGEKERGVTDDLIRASDRGSSHRDEGRSGGSVRLERGDRVEARYRGRGTKFYKGKISRVN 2154          
BLAST of mRNA_P-littoralis_Contig157.26.1 vs. uniprot
Match: F0YS74_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YS74_AURAN)

HSP 1 Score: 307 bits (786), Expect = 5.860e-96
Identity = 184/361 (50.97%), Postives = 219/361 (60.66%), Query Frame = 1
Query:    1 GMKVDALYRGGKRSYPGTIMIVNGDGTCDIAYDDGEREDSVKRSLITPTATPRGSPRLARQGSSDSADGGAHRQMAKGDRVEARYRGKGTKFYKGKISRVNSDDTFDIAYDDGEREIGIAAEHVRSLEPRSRPGDDRGGGDKPATLMEGDKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIAR 1083
            G KV+A YRG ++ YPG I    GDGT D+ YDDGE+E  V+  LI                           ++ +GD+VEARYRG+  K+Y GKI+R   D TFDIAYDDGERE  +    +RS     + G    GGDK   L EG+KVEARY+GR +YYPGRI R   DGT DI YDDGEKE  VE  L+R    G     G  +L EG KVEARY+GR +YYPG+I R   DGT DIDYDDGE+E  VE  L+RA  DG         L EG KVEARY+GR +YYPG+I R   DGT DIDYDDGE+E  VE  L+RA   G     G D   EG KVEARY+G+ RY+PG+I R
Sbjct:  118 GDKVEARYRGREKYYPGRIERDRGDGTYDVYYDDGEKETRVEERLIRKXXX----------------XXXXXXKLREGDKVEARYRGR-EKYYPGKITRDRGDGTFDIAYDDGERETRVEERLIRS-----KDGGGSSGGDK---LREGEKVEARYRGREKYYPGRIERDRGDGTYDIYYDDGEKETRVEERLIRKKDAGGGS--GGGKLREGDKVEARYRGREKYYPGKITRDRGDGTFDIDYDDGERETRVEERLIRAK-DGXX--XXXXXLREGAKVEARYRGREKYYPGKITRDRGDGTFDIDYDDGERETRVEERLIRAKDGGGG---GGDSFREGEKVEARYRGKERYHPGKIRR 445          
BLAST of mRNA_P-littoralis_Contig157.26.1 vs. uniprot
Match: A0A7S4A011_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A011_9STRA)

HSP 1 Score: 304 bits (779), Expect = 7.010e-96
Identity = 179/365 (49.04%), Postives = 222/365 (60.82%), Query Frame = 1
Query:    1 GMKVDALYRGGKRSYPGTIMIVNGDGTCDIAYDDGEREDSVKRSLITPTATPRGSPRLARQGSSDSADGGAHRQMAKGDRVEARYRGKGTKFYKGKISRVNSDDTFDIAYDDGEREIGIAAEHVRSLEPRSRPGDDRGGGDKPATLMEGDKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAE---RVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAV-GDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIAR 1083
            G K++A YRG  + YPG I    GD T DIAYDDGERE  V + LI  T                   GG   ++ +GD+VEA YRG+G KFY GKI+R   DDT+DI+YDDGERE  +A   +R L+          GG     L EGD++EA Y+GR ++YPG+I R   D T DIDYDDGE+E  V   L+R+   G     G D+L EG  VEARY+GR +YY G+I+R   DGT DI YDDGEKE  VE  L+R    G +    R   DRL EG KVEA Y+GR ++YPG+I+R   D T DIDYDDGE+E  V   L+R+  G G     GS +LEEG KVEARY+GR +YYPG+I R
Sbjct:   89 GDKIEADYRGRGKFYPGKISRDRGDDTYDIAYDDGERETRVAKRLIRSTG----------------GGGGGSDRLEEGDKVEADYRGRG-KFYPGKITRDRGDDTYDISYDDGERETRVAKRLIRKLD----------GGSSGGRLREGDRIEADYRGRGKFYPGKITRDRGDDTYDIDYDDGERETRVAKRLIRSKDGGG----GDDKLREGDLVEARYRGREKYYKGKISRDRGDGTYDIAYDDGEKETRVEERLIRKRERGSSRSRSRGADDRLSEGDKVEADYRGRGKFYPGKISRDRGDDTYDIDYDDGERETRVAKRLIRSKEGSG-----GSSKLEEGDKVEARYRGREKYYPGKITR 417          
BLAST of mRNA_P-littoralis_Contig157.26.1 vs. uniprot
Match: A0A1V9YSA0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YSA0_9STRA)

HSP 1 Score: 298 bits (762), Expect = 5.030e-95
Identity = 172/373 (46.11%), Postives = 241/373 (64.61%), Query Frame = 1
Query:    1 GMKVDALYRGGKRSYPGTIMIVNGDGTCDIAYDDGEREDSVKRSLITPTATPRGSPRLARQGSSDSADGGAHRQMAKGDRVEARYRGKGTKFYKGKISRVNSDDTFDIAYDDGEREIGIAAEHVRSLEPRSRPGDDRGGGDKPATLMEGDKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGSDR----------LEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVH 1089
            G KV+A Y+G    YPG I  V+ DG+CDI YDDGE+E  V++  I          RL   G++D A+     ++  G +VEA+Y+GK +K Y G I++V+S+ T+DI YDDGE+E  +A E +R  E          G      L  G KVEA+YKG++ +YPG+IA+VH DGTCD+DYDDGE E  V+   VRA+    ++      +E G KVEA+Y+G++ +YPG+IA++H DGTCD+DYDDGEKE+ ++  L+R +    A++  +D           L+ G KVEA+YKGR+ +YPG+IA+VH +GT DIDYDDGEKE+ V   LVR V  G  ++  +  L+ G KVEARYKG+S+YYPG+IA+ H
Sbjct:   22 GSKVEARYKGKSTYYPGKITKVHSDGSCDIDYDDGEKEKRVEKDFI----------RLV-PGATDDAEV----RLRVGSKVEAKYKGK-SKLYPGTIAKVHSNGTYDIDYDDGEKETNVAKELIRGSE----------GSPPKVRLKIGAKVEAKYKGKT-FYPGKIAKVHSDGTCDVDYDDGEVELRVKSDWVRAIASADSD------IEVGTKVEAKYRGKT-FYPGKIAKIHSDGTCDVDYDDGEKEKKIKRELIRVLD---AKKTSTDTKPGTADPDCDLDVGTKVEAKYKGRT-FYPGKIAKVHSNGTYDIDYDDGEKEKKVHKDLVRVVKMGSPKK--NTALKVGTKVEARYKGKSKYYPGKIAKAH 354          
BLAST of mRNA_P-littoralis_Contig157.26.1 vs. uniprot
Match: A0A8J2SZP4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZP4_9STRA)

HSP 1 Score: 317 bits (813), Expect = 4.380e-94
Identity = 183/362 (50.55%), Postives = 232/362 (64.09%), Query Frame = 1
Query:    1 GMKVDALYRGGKRSYPGTIMIVNGDGTCDIAYDDGEREDSVKRSLITPTATPRGSPRLARQGSSDSADGGAHRQMAKGDRVEARYRGKGTKFYKGKISRVNSDDTFDIAYDDGEREIGIAAEHVRSLEPRSRPGDDRGGGDKPATLMEGDKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAV-GDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIAR 1083
            G +++A YRG ++ Y GTI    GDGT DIAYDDGE+E  V+  LI          R   +GSS S   GA  ++++GD+VEA YRG+G KFY GKI+R   DDT+DIAYDDGEREI +A   +R +          GGG    +  EGDK+EA Y+GR ++YPG+I+R   D T DIDYDDGE+E  V   L+R+  G G     GS +LEEG KVEARY+GR +YYPG+I R   DGT DI YDDGE+E  VE  L++    G     GSD   EG K+EA Y+GR ++YPG+I+R   D T DIDYDDGE+E  V   L+R+   G      SD+LEEG KVEARY+GR +YYPG+I R
Sbjct:  252 GDEIEARYRGREKYYKGTISRDRGDGTYDIAYDDGEKETRVEERLI----------RKRERGSSRSRSRGADDRLSEGDKVEADYRGRG-KFYPGKITRDRGDDTYDIAYDDGEREIRVAKRLIRKI----------GGGSD--SFREGDKIEADYRGRGKFYPGKISRDRGDDTYDIDYDDGERETRVAKRLIRSKEGSG-----GSSKLEEGDKVEARYRGREKYYPGKITRDRGDGTYDISYDDGERETRVEERLIKKKDGGG----GSDSFREGDKIEADYRGRGKFYPGKISRDRGDDTYDIDYDDGERETRVSKRLIRSKDGGSG---SSDKLEEGDKVEARYRGREKYYPGKITR 578          
BLAST of mRNA_P-littoralis_Contig157.26.1 vs. uniprot
Match: A0A835ZKM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKM7_9STRA)

HSP 1 Score: 310 bits (794), Expect = 5.720e-92
Identity = 188/396 (47.47%), Postives = 247/396 (62.37%), Query Frame = 1
Query:    1 GMKVDALYRGGKRSYPGTIMIVNGDGTCDIAYDDGEREDSVKRSLITPTATPRGSPRLARQGSSDSADGGAHRQ--MAKGDRVEARYRGKGTKFYKGKISRVNSDDTFDIAYDDGEREIGIAAEHVRSLEPRSRPGDDRGGGDK------PATLMEGDKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAE--RVGSDR---LEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRA----------VGDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVG-DGQAERVGSDR--------LEEGMKVEARYKGRSRYYPGRIARVHR 1092
            G KV+A YRG +R +   +  VN DGT D+ YDDG  E  V+   +   +                   GA R   + +GD+VEARY+G+ T++Y GKI R N D T+D+ YDDGE+E+ +AA+ ++SLEP  R G+    G +       A L+EGDKVEARYKGR+RYYPG++ R +RDGT D+DYDDGEKE  V   L+R++   +    R+ S     L EG KVEARYKGR+R+YPG+I RV+RDGT D+DYDDGEKE  +   L+++          V DG     G+  L EG KVEARYKGR+R++PG+I RV+RDGT D+DYDDGEKE  V   L+R++  DG+    G  R        L EG KVEARYKGR+RYY G+I R +R
Sbjct:  565 GDKVEARYRGRERWFGAKVRKVNRDGTYDVDYDDGGCELDVRPEFVRLLSAXXXXXXXXXXXXXXXXXXGAARSPPLMEGDKVEARYKGR-TRYYPGKIQRANRDGTYDVDYDDGEKELSVAADLIKSLEPPPRRGESVNEGLRVSSSAAAAALIEGDKVEARYKGRARYYPGKLRRANRDGTYDVDYDDGEKELSVAAELIRSLEPPRRSPARIDSSSALPLREGDKVEARYKGRARHYPGKIRRVNRDGTYDVDYDDGEKELSMAADLIKSLEADARRTESVNDGAQ---GAAALREGDKVEARYKGRARFFPGKIRRVNRDGTYDVDYDDGEKELSVAADLIRSLEVDGRRPDSGGARGGGASAAALREGDKVEARYKGRARYYTGKIRRANR 956          
BLAST of mRNA_P-littoralis_Contig157.26.1 vs. uniprot
Match: A0A7S3ZZQ1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZQ1_9STRA)

HSP 1 Score: 279 bits (714), Expect = 1.810e-87
Identity = 169/367 (46.05%), Postives = 215/367 (58.58%), Query Frame = 1
Query:    1 GMKVDALYRGGKRSYPGTIMIVNGDGTCDIAYDDGEREDSVKRSLITPTATPRGSPRLARQGSSDSADGGAHRQMAKGDRVEARYRGKGTKFYKGKISRVNSDDTFDIAYDDGEREIGIAAEHVRSLEPRS---RPGDDRGGGDKPATLMEGDKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQAE---RVGSDRLEEGMKVEARYKGRSRYYPGRIAR 1083
            G  V+A Y+ G + Y G I+ VN +GT DI YDDG+ E +V    I                    A   A  ++ +GD VEARYRG+  K+YKGKISR   D T+DI YDDGE+E+ +    +R L   S   RP  D           EGDKVEARY+GR +YYPG+I+R   DGT DI YDDGE+E  V   L+R +  G     G D   EG K+EA Y+GR ++YPG+I+R   D T DI YDDGE+ R VE  L+R+   G +    SD+L EG ++EARY+GR +YY G I+R   DGT DI YDDGEKE  VE  L+R    G +    R   DRL EG KVEA Y+GR ++YPG+I R
Sbjct:   67 GETVEARYKNGSQYYKGNIVSVNSNGTYDIRYDDGDEERNVSAYKIRR-----------------KAGAAASTKLREGDAVEARYRGR-EKYYKGKISRDRMDGTYDINYDDGEKELRVEERLIRKLSDDSISPRPASDN--------FREGDKVEARYRGREKYYPGKISRDRGDGTYDIAYDDGERETRVAKRLIRKLDGGS----GGDSFREGDKIEADYRGRGKFYPGKISRDRGDDTYDIAYDDGERTR-VEAKLIRSKDGGGS----SDKLREGDEIEARYRGREKYYKGTISRDRGDGTYDIAYDDGEKETRVEERLIRKRERGSSRSRSRGADDRLSEGDKVEADYRGRGKFYPGKITR 398          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig157.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJS9_9PHAE1.050e-14668.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1B1_ECTSI5.580e-13462.40Calmodulin-like myosin-light chain n=1 Tax=Ectocar... [more]
A0A6H5JBA5_9PHAE2.790e-9953.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEH4_ECTSI3.790e-9952.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0YS74_AURAN5.860e-9650.97Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S4A011_9STRA7.010e-9649.04Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A1V9YSA0_9STRA5.030e-9546.11Uncharacterized protein (Fragment) n=1 Tax=Achlya ... [more]
A0A8J2SZP4_9STRA4.380e-9450.55Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835ZKM7_9STRA5.720e-9247.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3ZZQ1_9STRA1.810e-8746.05Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig157contigP-littoralis_Contig157:125416..127511 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G1B1
PFAMsAgenet,DUF4537,EF-hand_7,PUB
Model size1092
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.74e-135
EggNOG OGs2CMGM@1|root,2QQAC@2759|Eukaryota
DescriptionTudor domain
Cds size1089
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789748.719202-UTR-P-littoralis_Contig157:125415..1254181680789748.719202-UTR-P-littoralis_Contig157:125415..125418Pylaiella littoralis U1_48UTRP-littoralis_Contig157 125416..125418 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789748.7301435-CDS-P-littoralis_Contig157:125418..1256331680789748.7301435-CDS-P-littoralis_Contig157:125418..125633Pylaiella littoralis U1_48CDSP-littoralis_Contig157 125419..125633 +
1680789748.7426014-CDS-P-littoralis_Contig157:126232..1264671680789748.7426014-CDS-P-littoralis_Contig157:126232..126467Pylaiella littoralis U1_48CDSP-littoralis_Contig157 126233..126467 +
1680789748.7517717-CDS-P-littoralis_Contig157:126872..1275111680789748.7517717-CDS-P-littoralis_Contig157:126872..127511Pylaiella littoralis U1_48CDSP-littoralis_Contig157 126873..127511 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig157.26.1prot_P-littoralis_Contig157.26.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig157 125419..127511 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig157.26.1

>prot_P-littoralis_Contig157.26.1 ID=prot_P-littoralis_Contig157.26.1|Name=mRNA_P-littoralis_Contig157.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=363bp
MKVDALYRGGKRSYPGTIMIVNGDGTCDIAYDDGEREDSVKRSLITPTAT
PRGSPRLARQGSSDSADGGAHRQMAKGDRVEARYRGKGTKFYKGKISRVN
SDDTFDIAYDDGEREIGIAAEHVRSLEPRSRPGDDRGGGDKPATLMEGDK
VEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKERMVEPALVRAVGDGQ
AERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRDGTCDIDYDDGEKER
MVEPALVRAVGDGQAERVGSDRLEEGMKVEARYKGRSRYYPGRIARVHRD
GTCDIDYDDGEKERMVEPALVRAVGDGQAERVGSDRLEEGMKVEARYKGR
SRYYPGRIARVHR
back to top

mRNA from alignment at P-littoralis_Contig157:125416..127511+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig157.26.1 ID=mRNA_P-littoralis_Contig157.26.1|Name=mRNA_P-littoralis_Contig157.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2096bp|location=Sequence derived from alignment at P-littoralis_Contig157:125416..127511+ (Pylaiella littoralis U1_48)
GGCATGAAAGTAGACGCTCTGTATCGGGGCGGGAAGCGGTCGTACCCCGG GACGATCATGATCGTGAATGGTGACGGCACATGCGACATCGCGTATGACG ACGGCGAAAGGGAGGACTCGGTAAAGCGTAGCTTAATTACTCCAACTGCA ACACCTCGCGGCAGTCCCAGGTTGGCTCGCCAGGGCAGCAGCGACTCCGC TGATGGGGGAGCACATCGGTTGCGCGAACGGAGATCACCGAGTGGCGGCC GGCGCGGCGATGACGGCGATAGTGACGGGAGGGGTCGTGATAGTAGGCAA GTTCGTCATCACCACCGTGACCGTGACCGCGACCGGGAACGTGACCGCGG CGGTGGCGGGTCGCCTTCGGCTTGGTCCCGTCTTAAGGCTAATTCGTCGC GGGCGGGTGAGTCGAACGAAGGGAATTATGGCCGAGAAGTTGGAAGGGCA CCAAGTTCTATCAGGGCGAAGTGTCCAGAGTGAACGCCGACGGTACTCTC GATATCGCGTACGACGACGGTGAAAAAGAGATCGGGATCGCCCTGGAACA TGTAAAGTCGTTGAAGCCTACGGCAACAGGCGGCGGCGAGGGTGGAGACA GCAAAATGGCCAAGGGCGATAGAGTCGAAGCGAGGTATCGGGGAAAGGGA ACCAAGTTCTACAAGGGAAAAGTGTCCAGAGTAAACTCCGATGCGACTCT CGACATTGCGTATGACGACGGCGAGAAAGAAATCGGTATCGCCTTGGAAC ACGTCAACTCCTTAGAGTCTGCGGCGAGCGGCGGTGGTCGTGGCGGCGGC GGCGGTGGCGGTGGGAGCCAGATGGCCAAGGGAGATAGAGTGGAAGCGAG ATACCGCGGGAAGGGCACCAAGTTCTACAAGGGCAAGATCTCCCGGGTCA ACTCGGACGACACGTTCGACATTGCATACGACGATGGCGAGAGGGAGATC GGGATTGCGGCGGAGCATGTTCGGTCGTTGGAGCCGCGAAGCCGCCCCGG TGATGACCGGGGTGGTGGAGACAAGCCTGCGACGTTGATGGAAGGAGACA AGGTGGAGGCCAACTATCGAGGTCGGGGCCGGTTCTACAGGGGGTGCATC AGTCGGGTCAACCTCGACGGTACCTTTAACATCGACTACGACGATGGCGA GAAGGAGCGATGATATCGATCTACGAGAAGGAACGCATGGTGGAGCCTGC GCTCGTCAGAGCAGTCGGGGACGGCAAAGCCGAGCGGGTAGGAAGTGACC GGTTGGAGGAAGGCATGAAGGTGGAAGCTCGATACAAGGGCCGCAGCCGA TACTACCCCGGCAGGATCGCTCGAGTCCATCGTGACGGCACATGCGATAT CGACTACGACGATGGCGAGAAGGAACGCATGGTGGAGCTCGTCAGAGCAG TCGGGGACGGCCAAGCCGAGCGGGTAGGAAGCGACCGGTTGGAGGAAGGC ATGAAAGGTGGAAGCTCGATACAAGGGCCGCAGCCGATACTACCCCGGCA GGATCGCTCGAGTCCATCGTGACGGCACATGCGATATCGACTACGACGAT GGCGAGAAGGAACGCATGGTGGAGCCTGCGCTCGTTAGAGCAGTCGGGGA CGGCCAAGCCGAGCGGGTAGGAAGTGACCGGTTGGAGGAAGGCATGAAAG TGGAAGCTCGATACAAGGGCCGCAGCCGATACTACCCCGGCAGGATCGCT CGAGTCCATCGTGACGGTACATGCGATATCGACTACGACGATGGCGAGAA GGAACGCATGGTGGAGCCTGCGCTCGTCAGAGCAGTCGGGGACGGCCAAG CCGAGCGGGTAGGAAGTGACCGTCTGGAGGAAGGCATGAAGGTGGAAGCT CGATACAAGGGCCGCAGCCGATACTACCCCGGCAGGATCGCTCGAGTCCA TCGTGACGGCACATGCGATATCGACTACGACGATGGCGAGAAGGAACGCA TGGTGGAGCCTGCGCTCGTTAGAGCAGTCGGGGACGGTCAAGCCGAGCGG GTAGGAAGCGACCGGTTGGAGGAAGGCATGAAGGTGGAAGCTCGATACAA GGGCCGCAGTCGATACTACCCCGGCAGGATCGCTCGAGTCCATCGT
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig157:125416..127511+

>mRNA_P-littoralis_Contig157.26.1 ID=mRNA_P-littoralis_Contig157.26.1|Name=mRNA_P-littoralis_Contig157.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1089bp|location=Sequence derived from alignment at P-littoralis_Contig157:125416..127511+ (Pylaiella littoralis U1_48)
ATGAAAGTAGACGCTCTGTATCGGGGCGGGAAGCGGTCGTACCCCGGGAC
GATCATGATCGTGAATGGTGACGGCACATGCGACATCGCGTATGACGACG
GCGAAAGGGAGGACTCGGTAAAGCGTAGCTTAATTACTCCAACTGCAACA
CCTCGCGGCAGTCCCAGGTTGGCTCGCCAGGGCAGCAGCGACTCCGCTGA
TGGGGGAGCACATCGCCAGATGGCCAAGGGAGATAGAGTGGAAGCGAGAT
ACCGCGGGAAGGGCACCAAGTTCTACAAGGGCAAGATCTCCCGGGTCAAC
TCGGACGACACGTTCGACATTGCATACGACGATGGCGAGAGGGAGATCGG
GATTGCGGCGGAGCATGTTCGGTCGTTGGAGCCGCGAAGCCGCCCCGGTG
ATGACCGGGGTGGTGGAGACAAGCCTGCGACGTTGATGGAAGGAGACAAG
GTGGAAGCTCGATACAAGGGCCGCAGCCGATACTACCCCGGCAGGATCGC
TCGAGTCCATCGTGACGGCACATGCGATATCGACTACGACGATGGCGAGA
AGGAACGCATGGTGGAGCCTGCGCTCGTTAGAGCAGTCGGGGACGGCCAA
GCCGAGCGGGTAGGAAGTGACCGGTTGGAGGAAGGCATGAAAGTGGAAGC
TCGATACAAGGGCCGCAGCCGATACTACCCCGGCAGGATCGCTCGAGTCC
ATCGTGACGGTACATGCGATATCGACTACGACGATGGCGAGAAGGAACGC
ATGGTGGAGCCTGCGCTCGTCAGAGCAGTCGGGGACGGCCAAGCCGAGCG
GGTAGGAAGTGACCGTCTGGAGGAAGGCATGAAGGTGGAAGCTCGATACA
AGGGCCGCAGCCGATACTACCCCGGCAGGATCGCTCGAGTCCATCGTGAC
GGCACATGCGATATCGACTACGACGATGGCGAGAAGGAACGCATGGTGGA
GCCTGCGCTCGTTAGAGCAGTCGGGGACGGTCAAGCCGAGCGGGTAGGAA
GCGACCGGTTGGAGGAAGGCATGAAGGTGGAAGCTCGATACAAGGGCCGC
AGTCGATACTACCCCGGCAGGATCGCTCGAGTCCATCGT
back to top