mRNA_P-littoralis_Contig157.24.10 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig157.24.10 vs. uniprot
Match: A0A6H5KIR5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR5_9PHAE) HSP 1 Score: 803 bits (2073), Expect = 1.390e-285 Identity = 460/595 (77.31%), Postives = 487/595 (81.85%), Query Frame = 3
Query: 147 EASRKVQAGDVRPSELTEACIKQMERSSWLNCFVTECADSARMEAEAADARQARGGLVGLLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQAGSPLIGKTNMDEFGMGSGTLFSEYGRTLNPWSPGATADSPRTREGKEA-YFVPGGSSGGSAAAVSSGACFAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRFGLIAYASSLDTPGVLARSVLDAAMVLDVIVGPDSKDSTCIPAGS-RSGGDGFASGLLDAAVAAEGSAWPLEGATVGIPKEFNVEELADAGVREAWEHTARTATALGATVVEVSMPSVPQALAAYAVLASAEASSNLSRYDGLRYGSRA-EHAASPGXXXXXXXXXXXXMFRDQGELHAEITRTRTAGFGDEVKRRILTGCFVLCESAYHDYYEFAIEVQKRLRREMRAALSVADVLLAPTTPFPPFASSGAPAAPASLLLNDVLTVPVSLTGVPSISIPVATVPVGAATLTAKTTVRATAATAASSVCDS-KGGGGAAVKGRGGARGGVDAVVAAGEDEWCRLPLGMQVIGRPLSEGTMLRVAHVLEGHLDFAAQVPSRVREGRSPRR 1919
+ASRKVQ GDVRPSEL EACIKQ+ERSSWLNCFVT C +SAR+EA AADARQA G L G LDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQAGS L+GKTNMDEFGMGSGTLFSEYGRTLNPWS +SP E EA +FVPGGSSGGSAAAVSSG FAALGSDTGGS+RQPAAFCGVVGLKPTYGL+ R GLIAYASSLDTPGVLARSVLDAAMVLDV+ GPD KDSTCIPAG +GG GFAS LL AA A S+WPLEG TVGIPKEFNVEEL D GVREAWE+TARTA ALGATVVEVSM SVPQALAAYAVLASAEASSNLSRYDGLRYG+R + AAS G +FRDQGELHAEITRTRTA FGDEVKRRILTGCFVLCESAYHDYYE AIEV+KRLRREMRAALS ADVLLAPTTPFPPF S G PA PASLLLNDVLTVP+SLTGVP++SIPVAT P T R T A ++S C S +GG G + GGA GV A AA E CRLPLGMQ+IGRPL E MLRVAH LE LDFA+QVP RVRE R+ RR
Sbjct: 12 KASRKVQEGDVRPSELAEACIKQIERSSWLNCFVTRCFNSARLEAGAADARQANGTLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQAGSILMGKTNMDEFGMGSGTLFSEYGRTLNPWS----RESPGDEENTEAPFFVPGGSSGGSAAAVSSGCSFAALGSDTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSVLDAAMVLDVVAGPDPKDSTCIPAGKGHAGGGGFASDLLKAAAAGSSSSWPLEGVTVGIPKEFNVEEL-DVGVREAWENTARTAAALGATVVEVSMSSVPQALAAYAVLASAEASSNLSRYDGLRYGARTGQTAASRGEGAAVCGGG---IFRDQGELHAEITRTRTAYFGDEVKRRILTGCFVLCESAYHDYYELAIEVRKRLRREMRAALSEADVLLAPTTPFPPFPSCGPPADPASLLLNDVLTVPISLTGVPAVSIPVATTP---------TARRTTPAVTSTSCCSSDRGGAGXS----GGAEAGVGA--AAPGAEHCRLPLGMQIIGRPLGEAAMLRVAHELESRLDFASQVPERVREPRAERR 583
BLAST of mRNA_P-littoralis_Contig157.24.10 vs. uniprot
Match: D8LG69_ECTSI (Glutaminyl-tRNA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG69_ECTSI) HSP 1 Score: 650 bits (1678), Expect = 1.060e-227 Identity = 362/462 (78.35%), Postives = 383/462 (82.90%), Query Frame = 3
Query: 30 MRSASRHTRRRPKQWLRVRAATLSFQFAPSSGLTGLSLDEASRKVQAGDVRPSELTEACIKQMERSSWLNCFVTECADSARMEAEAADARQARGGLVGLLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQAGSPLIGKTNMDEFGMGSGTLFSEYGRTLNPWSPGATADSPRTREGKEAYFVPGGSSGGSAAAVSSGACFAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRFGLIAYASSLDTPGVLARSVLDAAMVLDVIVGPDSKDSTCIPAGS-RSGGDGFASGLLDAAVAAEGSAWPLEGATVGIPKEFNVEELADAGVREAWEHTARTATALGATVVEVSMPSVPQALAAYAVLASAEASSNLSRYDGLRYGSRA-EHAASPGXXXXXXXXXXXXMFRDQGELHAEITRTRTAGFGDEVKRRILTGCFVLCESAYHDYYEFAIE 1409
MRSA RRR +++ S A +S +GLSL EASRKVQ GDVRPSEL EACIKQMERSSWLNCFVT C DSAR+EAEAADARQA G L G LDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQ GS L+GKTNMDEFGMGSGTLFSEYGRTLNPWSP + D T + + VPGGSSGGSAAAVSSG FAALGSDTGGS+RQPAAFCGVVGLKPTYGL+ R GLIAYASSLDTPGVLARS+LDAAMVLDV+ GPDS+DSTCIPAG R+GG GFAS LL AA A S+WPLEG TVGIPKEFNVEEL DAGVREAWE+TARTA ALGA VVEV MPSVPQALAAYAVLASAEASSNLSRYDGLRYG+R + AAS G +FRDQGELHAEITRTRTA FGDEVKRRILTGCFVLCESAYHDYYE AIE
Sbjct: 1 MRSACGQARRRQRRFF-------SSVTADASLHSGLSLAEASRKVQEGDVRPSELAEACIKQMERSSWLNCFVTRCFDSARLEAEAADARQANGTLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQVGSILMGKTNMDEFGMGSGTLFSEYGRTLNPWSPESPGDEKNT---EAPFLVPGGSSGGSAAAVSSGCSFAALGSDTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSILDAAMVLDVVAGPDSRDSTCIPAGKGRAGGGGFASDLLGAAAAGSSSSWPLEGVTVGIPKEFNVEEL-DAGVREAWENTARTAAALGAAVVEVFMPSVPQALAAYAVLASAEASSNLSRYDGLRYGARTGQTAASRGEGAAVGGGG---IFRDQGELHAEITRTRTAYFGDEVKRRILTGCFVLCESAYHDYYELAIE 448
BLAST of mRNA_P-littoralis_Contig157.24.10 vs. uniprot
Match: W7TVN2_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVN2_9STRA) HSP 1 Score: 414 bits (1063), Expect = 8.690e-133 Identity = 269/599 (44.91%), Postives = 345/599 (57.60%), Query Frame = 3
Query: 108 FAPSSGLTGLSLDEASRKVQAGDVRPSELTEACIKQMERSSWLNCFVTECADSARMEAEAADARQARGGLVGLLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQAGSPLIGKTNMDEFGMGSGTLFSEYGRTLNPWSPGAT-ADSPRTREGKEAYFVPGGSSGGSAAAVSSGACFAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRFGLIAYASSLDTPGVLARSVLDAAMVLDVIVGPDSKDSTCIPAGSRSGGDGFASGLLDAAVA--AEGSAWPLEGATVGIPKEFNVEELADAGVREAWEHTARTATALGATVVEVSMPSVPQALAAYAVLASAEASSNLSRYDGLRYGSRAEHAASPGXXXXXXXXXXXXMFRDQGELHAEITRTRTAGFGDEVKRRILTGCFVLCESAYHDYYEFAIEVQKRLRREMRAALSVADVLLAPTTPFPPFASSGAPAAPASLLLNDVLTVPVSLTGVPSISIPVATVPVGAATLTAKTTVRATAATAASSVCDSKGGGGAAVKGRGGARGGVDAVVAAGEDEWCRLPLGMQVIGRPLSEGTMLRVAHVLEGHLDFAAQVPSRV 1895
++ S + +S+ E + ++ G+ P + + C+ + + +S LN FVT +A EA A + G L GIP A KDNFCT GV+TTASS LA F PPY +T RL +G+ ++GKTNMDEFGMGS TLFS +G+T+NPWS A D PR GGSSGGSA AV++G+ AALGSDTGGS+RQPAAFCG+VGLKPTYG VSR GLIAYASSLD PGVL R+V DAA+VLDV+ G D DSTC+ R D ++AA + A G A L G VGIP EF ++EL + V AWE AR GA V+ VS+PS+P AL Y V+A AEASSNL+RYDG+R+G R + DQ LH IT +R+ GFGDEV+RR+++GC VL AY YYE A+ + RLRREM ALS DVLL P TP PF + PA PA+L++NDV+TVP SL G+P+I++PV P + V +P+G+Q+IGR L E +L VA LE +F+ ++P V
Sbjct: 68 YSTQSQQSAVSMVEIAAAIRKGNADPFSVMQRCLSRQQETSGLNSFVTVLRHAAEKEAAVAGRHSV---MKGPLHGIPIAVKDNFCTAGVRTTASSRMLANFVPPYSATAVSRLEASGAIVVGKTNMDEFGMGSATLFSHFGKTINPWSQAAEKGDKPR--------LAAGGSSGGSAVAVATGSALAALGSDTGGSVRQPAAFCGLVGLKPTYGRVSRHGLIAYASSLDCPGVLTRTVADAALVLDVVAGRDPLDSTCLEQPHRPCFDR----TMEAAASSRAAGLAVSLRGLKVGIPAEFAIQELEGSAVT-AWEEGARLLRDAGADVLPVSVPSIPLALPTYFVIACAEASSNLARYDGIRFGFRGSKSLRASRSKEGIGSADTEE-DDQRALHDFITASRSQGFGDEVQRRVISGCRVLSAQAYATYYEKALAARIRLRREMNTALSHVDVLLTPVTPTGPFPLT-TPAEPAALMVNDVMTVPASLAGLPAIAVPVDLAP--------------------------------------------SSFVPG-----LPVPVGLQLIGRHLCEQQLLIVARALEVRCNFSERIPDYV 599
BLAST of mRNA_P-littoralis_Contig157.24.10 vs. uniprot
Match: A0A1V9YGS0_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGS0_9STRA) HSP 1 Score: 397 bits (1020), Expect = 1.610e-127 Identity = 264/591 (44.67%), Postives = 326/591 (55.16%), Query Frame = 3
Query: 138 SLDEASRKVQAGDVRPSELTEACIKQMERSSWLNCFVTECADSARMEAEAADARQARGGLVGLLDGIPYAAKDNFCT-LGVQTTASSAALAGFTPPYDSTPTGRLRQAGSPLIGKTNMDEFGMGSGTLFSEYGRTLNPWSPGATADSPRTREGKEAYFVPGGSSGGSAAAVSSGACFAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRFGLIAYASSLDTPGVLARSVLDAAMVLDVIVGPDSKDSTCIPAGSRSGGDGFASGLLDAAVAAEGSAWPLEGATVGIPKEFNVEELADAGVREAWEHTARTATALGATVVEVSMPSVPQALAAYAVLASAEASSNLSRYDGLRYGSRAEHAASPGXXXXXXXXXXXXMFRDQGELHAEITRTRTAGFGDEVKRRILTGCFVLCESAYHDYYEFAIEVQKRLRREMRAALSVA-DVLLAPTTPFPPFASSGAPAAPASLLLNDVLTVPVSLTGVPSISIPVATVPVGAATLTAKTTVRATAATAASSVCDSKGGGGAAVKGRGGARGGVDAVVAAGEDEWCRLPLGMQVIGRPLSEGTMLRVAHVLEGHLDFAAQVPSRVREG 1904
SL +AS + AG LTEACI+Q+E + LN FV E D AR A A+DAR+A G G LDGIP A KD FC V TT S L GF PY+ST T RL AG+ +GK NMDEFGMGS T +S +G T+NPWS D+ V GGSSG SAAA++SG CFAALGSDTGGS+RQPAA+CGV G+KP YG +SR G+IAYASSLDTP + ++ DAA+VL ++ GPD KDST I DG L V+ L G TVG+P E+ VEEL + + W+ R GA VVEVS+P AL Y +LA AEASSNLSRYDG+RYG RA + LH RTR+ GFG EV+RRIL+G FVL A++DYYE A+ V++R+R + AA + DVLL PTTP PF+ A A P + +ND++T+P SL G+P++S+P A V A G LPLG+Q+IG P +E T+L A LE L F VP RV EG
Sbjct: 15 SLADASAALSAGTTTAVALTEACIRQIEATRGLNMFVAETIDDARAAAVASDARRAAGTAKGPLDGIPIAVKDIFCMDNSVPTTCGSKILQGFRAPYESTATQRLLDAGAVPLGKLNMDEFGMGSATKYSTFGATINPWSKNLGDDA----------LVAGGSSGASAAAIASGCCFAALGSDTGGSVRQPAAYCGVTGIKPNYGRISRHGMIAYASSLDTPALFTKTARDAALVLPLLAGPDGKDSTAIQ-------DGVPHDWLPTDVS------HLRGVTVGVPNEYFVEELPET-ILSVWDEGIRHLRDAGARVVEVSLPMTKYALPTYYILACAEASSNLSRYDGVRYGYRAATSDDAAVADDTA--------NQANALHDLYCRTRSEGFGPEVQRRILSGTFVLSAGAFNDYYERAVIVRQRIRADFAAAFATGVDVLLTPTTPTGPFSLHTA-ADPIEMFMNDIMTIPASLAGLPAVSVPAA-------------------------------------------------VTADG------LPLGLQLIGAPRTEDTVLLAAGALESRLRFDELVPDRVYEG 517
BLAST of mRNA_P-littoralis_Contig157.24.10 vs. uniprot
Match: A0A067CTE2_SAPPC (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTE2_SAPPC) HSP 1 Score: 392 bits (1007), Expect = 1.860e-125 Identity = 258/591 (43.65%), Postives = 328/591 (55.50%), Query Frame = 3
Query: 138 SLDEASRKVQAGDVRPSELTEACIKQMERSSWLNCFVTECADSARMEAEAADARQARGGLVGLLDGIPYAAKDNFCTLG-VQTTASSAALAGFTPPYDSTPTGRLRQAGSPLIGKTNMDEFGMGSGTLFSEYGRTLNPWSPGATADSPRTREGKEAYFVPGGSSGGSAAAVSSGACFAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRFGLIAYASSLDTPGVLARSVLDAAMVLDVIVGPDSKDSTCIPAGSRSGGDGFASGLLDAAVAAEGSAWPLEGATVGIPKEFNVEELADAGVREAWEHTARTATALGATVVEVSMPSVPQALAAYAVLASAEASSNLSRYDGLRYGSRAEHAASPGXXXXXXXXXXXXMFRDQGELHAEITRTRTAGFGDEVKRRILTGCFVLCESAYHDYYEFAIEVQKRLRREMRAAL-SVADVLLAPTTPFPPFASSGAPAAPASLLLNDVLTVPVSLTGVPSISIPVATVPVGAATLTAKTTVRATAATAASSVCDSKGGGGAAVKGRGGARGGVDAVVAAGEDEWCRLPLGMQVIGRPLSEGTMLRVAHVLEGHLDFAAQVPSRVREG 1904
SL E S+ + AG +ELTEACI Q+ + LN FV + +SAR A A+DAR+A G G LDGIP KD FC TT S L GF PY+ST T RL AG+ +GK NMDEFGMGS T +S++G T+NPWS T +A V GGSSGGSAAA++SG CFAALGSDTGGS+RQPAA+CGV G KP YG +SR G+IAYASSLDTP + ++ DA++VL ++ GPD KD+T I L D L+G TVG+P E+ V+EL +A + W+ R GA VVEVS+P+ AL Y +LA AEASSNLSRYDG+RYG RA + + LH RTR+ GFG EV+RRIL+G FVL A++DYYE A+ V++R+R + A S DVLL PTTP PF+ GA A P + +ND++T+P SL G+P++S+P A + D G LPLG+Q+IG P +E +L A LE L F +PSRV EG
Sbjct: 22 SLVEVSQALAAGTTTATELTEACIAQINATRDLNMFVADTFESARTLAAASDARRASGAARGPLDGIPVGVKDIFCMHNEAPTTCGSKMLDGFHAPYESTATQRLLDAGAVPLGKLNMDEFGMGSATKYSQFGATINPWSTNLT----------DAALVSGGSSGGSAAAIASGCCFAALGSDTGGSVRQPAAYCGVTGFKPNYGRISRHGMIAYASSLDTPALFTKTARDASLVLPLLAGPDGKDATAIQ-----------ETLPDTWCQLPADTSSLKGLTVGVPNEYFVQELPEA-MLHVWDEGIRHLRDAGARVVEVSLPTTKYALPTYYILACAEASSNLSRYDGVRYGFRAAVSEATSVADAS---------NQATALHDLYCRTRSEGFGPEVQRRILSGTFVLSAGAFNDYYERAVIVRQRIRDDFAATFTSGVDVLLTPTTPTGPFSLHGA-ADPIEMFMNDIMTIPASLAGLPALSLPAA-------------------------ITDDAG-----------------------------LPLGLQLIGAPKTEDRLLSAAVALEDRLGFRQLIPSRVYEG 526
BLAST of mRNA_P-littoralis_Contig157.24.10 vs. uniprot
Match: W4H4Y8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4Y8_9STRA) HSP 1 Score: 391 bits (1005), Expect = 4.470e-125 Identity = 262/597 (43.89%), Postives = 329/597 (55.11%), Query Frame = 3
Query: 120 SGLTGLSLDEASRKVQAGDVRPSELTEACIKQMERSSWLNCFVTECADSARMEAEAADARQARGGLVGLLDGIPYAAKDNFCTL-GVQTTASSAALAGFTPPYDSTPTGRLRQAGSPLIGKTNMDEFGMGSGTLFSEYGRTLNPWSPGATADSPRTREGKEAYFVPGGSSGGSAAAVSSGACFAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRFGLIAYASSLDTPGVLARSVLDAAMVLDVIVGPDSKDSTCIPAGSRSGGDGFASGLLDAAVAAEGSAWPLEGATVGIPKEFNVEELADAGVREAWEHTARTATALGATVVEVSMPSVPQALAAYAVLASAEASSNLSRYDGLRYGSRAE---HAASPGXXXXXXXXXXXXMFRDQGELHAEITRTRTAGFGDEVKRRILTGCFVLCESAYHDYYEFAIEVQKRLRREMRAAL-SVADVLLAPTTPFPPFASSGAPAAPASLLLNDVLTVPVSLTGVPSISIPVATVPVGAATLTAKTTVRATAATAASSVCDSKGGGGAAVKGRGGARGGVDAVVAAGEDEWCRLPLGMQVIGRPLSEGTMLRVAHVLEGHLDFAAQVPSRV 1895
S G SL +AS + G V LT+ACI Q+E + N FV DSA A +DAR+ G G LDGIP KD FC GV TTASS L GF PY+ST T RL AG+ +GK NMDEF MGSGT +S +G T+NPWS + V GGSSG SAAAV+SG CFAALGSDTGGS+RQPAA+CGV GLKP YG +SR G+IA+ASSLDTPG+LA+++ DAA+VL I GPD DST +P S + A+E A + TVG+PKE+ V+EL ++ + + W+ G VVE S+P+ AL Y +LA AEASSNLSRYDG+RYG RAE AA+ LH RTR+ GFGDEV+RRIL+G FVL A DYYE A+ V++ +R + + S DVLL PTTP PFA G A P + +ND++T+P SL G+PS+S+P A V D ++PLG+Q+IG P E T+L VAH+LE DF+ +P RV
Sbjct: 19 SSWAGRSLTDASAALANGSVTSVALTQACIDQIEATKRFNMFVATTFDSALARASESDARRRDGRACGPLDGIPVGVKDIFCMQNGVPTTASSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSSDLG----------DRALVAGGSSGASAAAVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILAKTIRDAAIVLHAIAGPDGHDSTALPDKLPSQWE----------PASETDATNTKQLTVGVPKEYYVKELPES-ILKVWDQGIEWLLQSGVRVVEASLPTTKYALPTYYILACAEASSNLSRYDGVRYGFRAELNNEAAAAAVADASN--------NQANALHDLYCRTRSEGFGDEVQRRILSGTFVLSAGALADYYERAVLVRQTIRDDFASTFESGIDVLLTPTTPSGPFAVHGK-ANPVDMFMNDIMTIPASLAGLPSVSVPAA-------------------------VLD-------------------------------QMPLGLQLIGAPHQEHTLLHVAHLLEQRADFSRHIPLRV 529
BLAST of mRNA_P-littoralis_Contig157.24.10 vs. uniprot
Match: A0A6G0X3T0_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3T0_9STRA) HSP 1 Score: 377 bits (967), Expect = 1.780e-119 Identity = 251/595 (42.18%), Postives = 318/595 (53.45%), Query Frame = 3
Query: 117 SSGLTGLSLDEASRKVQAGDVRPSELTEACIKQMERSSWLNCFVTECADSARMEAEAADARQARGGLVGLLDGIPYAAKDNFCTL-GVQTTASSAALAGFTPPYDSTPTGRLRQAGSPLIGKTNMDEFGMGSGTLFSEYGRTLNPWSPGATADSPRTREGKEAYFVPGGSSGGSAAAVSSGACFAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRFGLIAYASSLDTPGVLARSVLDAAMVLDVIVGPDSKDSTCIPAGSRSGGDGFASGLLDAAVAAEGSAWPLEGATVGIPKEFNVEELADAGVREAWEHTARTATALGATVVEVSMPSVPQALAAYAVLASAEASSNLSRYDGLRYGSRAEHAASPGXXXXXXXXXXXXMFRDQGELHAEITRTRTAGFGDEVKRRILTGCFVLCESAYHDYYEFAIEVQKRLRREMRAAL-SVADVLLAPTTPFPPFASSGAPAAPASLLLNDVLTVPVSLTGVPSISIPVATVPVGAATLTAKTTVRATAATAASSVCDSKGGGGAAVKGRGGARGGVDAVVAAGEDEWCRLPLGMQVIGRPLSEGTMLRVAHVLEGHLDFAAQVPSRV 1895
SS G SL EAS + G V ELT CI Q++ + N FV + DSA +A +D R+ G +G LDGIP KD FC G TTASS L GF PY+ST T RL AG+ +GK NMDEF MGS T +S +G T+NPWS ++ GGSSG SAAA+++G CFAALGSDTGGS+RQPAA+CGV GLKP YG +SR G+IA+ASSLDTPG+L ++V DA++VL I GPD+ DST +P S + L TVGIP E+ V+EL D + + W+ GA VVE S+P+ AL Y +LA AEASSNLSRYDG+RYG RA + LH RTR+ GFG+EV+RRIL+G FVL A+ DYYE A+ V++++R + A L S DVLL PTTP PF A P + +ND++T+P SL G+PSIS+P AT G PLG+Q+I P E T+LRVA +E H +F +P RV
Sbjct: 16 SSSWAGRSLTEASDALANGSVTSFELTRGCIDQIQATDRFNMFVAKTFDSALDQAAQSDLRRKNGQALGPLDGIPVGVKDIFCMKNGQPTTASSKILEGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSATKYSTFGATINPWSSDLDKNA----------LAAGGSSGASAAAIAAGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILTKTVRDASIVLRAIAGPDTNDSTSLPDVIEPSWCALPSSKQE----------DLSRLTVGIPNEYYVKELPDQ-ILKVWDQGIEWLRQSGARVVEASLPTTKYALPTYYILACAEASSNLSRYDGVRYGFRAAPSDDE---------EVDNSVNQATALHDLYCRTRSQGFGEEVQRRILSGTFVLSAGAFSDYYERAVLVRQQIRDDFAATLGSGIDVLLTPTTPSGPFGLH-TKADPIDMFMNDIMTIPASLAGLPSISVPAATTTDG-------------------------------------------------------FPLGLQLIAAPKQEDTLLRVALAMESHANFDQHIPPRV 524
BLAST of mRNA_P-littoralis_Contig157.24.10 vs. uniprot
Match: A0A5D6Y1X3_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1X3_9STRA) HSP 1 Score: 375 bits (963), Expect = 1.040e-118 Identity = 252/595 (42.35%), Postives = 328/595 (55.13%), Query Frame = 3
Query: 138 SLDEASRKVQAGDVRPSELTEACIKQMERSSWLNCFVTECADSARMEAEAADARQARGGLVGLLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQAGSPLIGKTNMDEFGMGSGTLFSEYGRTLNPWSPGATADSPRTREGKEAYFVPGGSSGGSAAAVSSGACFAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRFGLIAYASSLDTPGVLARSVLDAAMVLDVIVGPDSKDSTCIPAGSRSGGDGFASGLLDAAVAAEGSAWPLEGATVGIPKEFNVEELADAGVREAWEHTARTATALGATVVEVSMPSVPQALAAYAVLASAEASSNLSRYDGLRYGSRAEHAASPGXXXXXXXXXXXXMFRDQGE-LHAEITRTRTAGFGDEVKRRILTGCFVLCESAYHDYYEFAIEVQKRLRREMRAALSV--ADVLLAPTTPFPPFASSG--APAAPASLLLNDVLTVPVSLTGVPSISIPVATVPVGAATLTAKTTVRATAATAASSVCDSKGGGGAAVKGRGGARGGVDAVVAAGEDEWCRLPLGMQVIGRPLSEGTMLRVAHVLEGHLDFAAQVPSRVREGR 1907
SL +A+ + A V +LT ACI Q+E + LN FV + A AEA+DAR+A GG +G LDGIP KD FC V TTA+S L GF PY+ST T RL G+ +GK NMDEF MGSGTL+S++G T+NPWS D+ G CFAALGSDTGGS+RQPAA+CG+VGLKP+YG VSR G+I++ASSLDTPG+ R+V DAA+VL I GPD KDSTC+ D S + + + EG L G VG+P E+ V+EL D + W+ + GA VV +S+P+ + AY ++A AEASSNLSRYDG+RYG RA++ DQ + LH RTR+ GFGDEV+RRIL+G FVL A DYYE A+ V++++R + A DVLL PTTP PFA P ++ LNDV+T+P ++ GVP++SIP A+LT+K G+ PLG+Q++G +E T+LRVAH LE DFA+ +PSRV E R
Sbjct: 30 SLLQAAAALDARQVTAVQLTRACIAQVEATHALNAFVYTDFERALRLAEASDARRAAGGALGALDGIPVGVKDLFCMEDVPTTAASKILDGFVSPYESTATARLLAQGAVPLGKLNMDEFAMGSGTLYSKFGATINPWSANLEDDAVXXXXXXXXXXXX----------XXXGCCFAALGSDTGGSVRQPAAYCGIVGLKPSYGRVSRHGMISFASSLDTPGIFTRTVGDAAVVLKAIAGPDEKDSTCMTDDVPL--DWCNSTIEQSLASREGD---LTGVRVGVPHEYFVKELPDE-ILNVWDKGVEWLLSAGAQVVSMSLPTTKLCIPAYYIIACAEASSNLSRYDGVRYGYRAKNVELENQS-------------DQSDALHDLYCRTRSEGFGDEVQRRILSGTFVLSAGAMSDYYERAVIVRQKIREDFENAFEAQGVDVLLTPTTPSGPFAVHNKLVKEDPVAMYLNDVMTIPANMAGVPAMSIP--------ASLTSK-----------------------------------------GDH-----PLGLQLMGARRTEATVLRVAHALEQRADFASLIPSRVYESR 541
BLAST of mRNA_P-littoralis_Contig157.24.10 vs. uniprot
Match: A0A1V9ZNS3_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNS3_9STRA) HSP 1 Score: 374 bits (959), Expect = 2.760e-118 Identity = 248/597 (41.54%), Postives = 330/597 (55.28%), Query Frame = 3
Query: 120 SGLTGLSLDEASRKVQAGDVRPSELTEACIKQMERSSWLNCFVTECADSARMEAEAADARQARGGLVGLLDGIPYAAKDNFCTLG-VQTTASSAALAGFTPPYDSTPTGRLRQAGSPLIGKTNMDEFGMGSGTLFSEYGRTLNPWSPGATADSPRTREGKEAYFVPGGSSGGSAAAVSSGACFAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRFGLIAYASSLDTPGVLARSVLDAAMVLDVIVGPDSKDSTCIPAGSRSGGDGFASGLLDAAVAAEGSAWPLEGATVGIPKEFNVEELADAGVREAWEHTARTATALGATVVEVSMPSVPQALAAYAVLASAEASSNLSRYDGLRYGSRAEHAASPGXXXXXXXXXXXXMFRDQGELHAEITRTRTAGFGDEVKRRILTGCFVLCESAYHDYYEFAIEVQKRLRREMRAAL-SVADVLLAPTTPFPPFASSGAPAAPASLLLNDVLTVPVSLTGVPSISIPVATVPVGAATLTAKTTVRATAATAASSVCDSKGGGGAAVKGRGGARGGVDAVVAAGEDEWCRLPLGMQVIGRPLSEGTMLRVAHVLEGHLDFAAQVPSRVREG 1904
+ + G SL EAS+ ++ + ELT ACI+Q+E + LN FV + +SAR A+ +D R++ G G LDGIP KD FC TT S L GF PY+ST T RL AG+ +GK NMDEFGMGS T +S++G T+NPWS ++ + V GGSSG SAAA++SG FAALGSDTGGS+RQPAA+CGV G+KP YG +SR G+IAYASSLDTP ++ DA++VL ++ GPD KDST I D + G S+ L G TVG+PKE+ V+EL + + W+ + GA VVE S+P AL Y +LA AEASSNLSRYDG+RYG RA + G LH RTR+ GFG+EV+RRIL+G FVL A++DYYE A+ V++R+R++ + S DVLL PTTP PF+ G A P + +ND++T+P SL G+PSIS+P A + A G PLG+Q+IG P E +L+ A +E ++F +P+RV EG
Sbjct: 19 TSIKGKSLAEASKALETQTISALELTNACIEQIEATRQLNMFVADTFESARQLAKESDIRRSNGNARGPLDGIPVGVKDIFCMNNEAPTTCGSKILEGFKSPYESTVTQRLLDAGAIPLGKLNMDEFGMGSATKYSKFGSTINPWS----------KDFDKNALVAGGSSGASAAAIASGCVFAALGSDTGGSVRQPAAYCGVTGIKPNYGRISRHGMIAYASSLDTPAFFTKTAKDASIVLPLLSGPDGKDSTAIQ-------DSISPGWCQLP-----SSLNLNGLTVGVPKEYFVQELPEE-ILNVWDQGIKHLKEAGARVVETSLPLTKYALPTYYILACAEASSNLSRYDGVRYGHRA---TTEGIAVNNDDS------NQANALHDLYCRTRSEGFGEEVQRRILSGTFVLSAGAFNDYYERAVIVRERIRKDFANSFESGIDVLLTPTTPTGPFSLHGN-ADPIDMFMNDIMTIPASLAGLPSISVPTA-------------------------------------------------LSADG------FPLGLQLIGAPKEEDIILQAAIAMENQINFNQFIPTRVYEG 527
BLAST of mRNA_P-littoralis_Contig157.24.10 vs. uniprot
Match: A0A6N7AIU1_9PROT (Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N7AIU1_9PROT) HSP 1 Score: 369 bits (946), Expect = 8.900e-117 Identity = 249/596 (41.78%), Postives = 315/596 (52.85%), Query Frame = 3
Query: 126 LTGLSLDEASRKVQAGDVRPSELTEACIKQMERSSWLNCFVTECADSARMEAEAADARQARGGLVGLLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQAGSPLIGKTNMDEFGMGSGTLFSEYGRTLNPWSPGATADSPRTREGKEAYFVPGGSSGGSAAAVSSGACFAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRFGLIAYASSLDTPGVLARSVLDAAMVLDVIVGPDSKDSTCIPAGSRSGGDGFASGLLDAAVAAEGSAWPLEGATVGIPKEFNVEELADAGVREAWEHTARTATALGATVVEVSMPSVPQALAAYAVLASAEASSNLSRYDGLRYGSRAEHAASPGXXXXXXXXXXXXMFRDQGELHAEITRTRTAGFGDEVKRRILTGCFVLCESAYHDYYEFAIEVQKRLRREMRAALSVADVLLAPTTPFPPFASSGAPAAPASLLLNDVLTVPVSLTGVPSISIPVATVPVGAATLTAKTTVRATAATAASSVCDSKGGGGAAVKGRGGARGGVDAVVAAGEDEWCRLPLGMQVIGRPLSEGTMLRVAHVLEGHLDFAAQVPSRVREGRSP 1913
LT L+L +A ++ GD E+T A ++ MER +LN F+TE D A A +DAR+ R G G LDG+P KD FCT G+ TTA S L GF PPY+ST + RL+ AG+ ++GKTN+DEF MGS + S +G LNPW + R E VPGGSSGGSAAAV++ C AA G+DTGGSIRQPAAFCG+VGLKPTYG SR+G+IA+ASSLD G + R+V DAA++L + G D KDST P + D A A G + G VGIP+E+ E L +A + W+ T GA V+VS+P ALA Y V+A AEASSNL+RYDG+R+G R E G L +TR AGFG EV+RRIL G +VL Y YY A +V+ + R+ A DV+L PT P P FA P ++ LNDV TVP SL G+P +S+P + A G LPLG+Q+IGRP E T+LR VLE DF A+ P REG P
Sbjct: 4 LTDLTLAQARTGLEKGDFTAVEVTNAHLEAMERGRFLNAFITETPDHALEAARRSDARR-RAGTAGALDGLPIGIKDLFCTKGIPTTAGSHILDGFKPPYESTVSARLKAAGAVMLGKTNLDEFAMGSSNMTSYHGAVLNPW---------KRRSAPEVTLVPGGSSGGSAAAVAARLCLAATGTDTGGSIRQPAAFCGLVGLKPTYGRCSRWGIIAFASSLDQAGPITRTVHDAALMLTAMAGHDPKDSTSAPVP-----------VPDFARALTGD---IRGLKVGIPREYRPEGL-NAEIAALWDQGIDWLTTAGAVPVDVSLPHTSHALATYYVIAPAEASSNLARYDGVRFGLRVE---------------------GDGSLDDMYMKTRAAGFGHEVRRRILIGTYVLSAGYYDAYYLKAQKVRALIARDFHRAFETVDVILTPTVPTPAFAMGEKMDDPVTMYLNDVFTVPTSLAGLPGLSVPAG-------------------------------------------------LSADG------LPLGLQIIGRPFDEETVLRTGAVLETAADFTAR-PLLWREGERP 497 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig157.24.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig157.24.10 >prot_P-littoralis_Contig157.24.10 ID=prot_P-littoralis_Contig157.24.10|Name=mRNA_P-littoralis_Contig157.24.10|organism=Pylaiella littoralis U1_48|type=polypeptide|length=632bp MRSASRHTRRRPKQWLRVRAATLSFQFAPSSGLTGLSLDEASRKVQAGDVback to top mRNA from alignment at P-littoralis_Contig157:116308..123750- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig157.24.10 ID=mRNA_P-littoralis_Contig157.24.10|Name=mRNA_P-littoralis_Contig157.24.10|organism=Pylaiella littoralis U1_48|type=mRNA|length=7443bp|location=Sequence derived from alignment at P-littoralis_Contig157:116308..123750- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig157:116308..123750- >mRNA_P-littoralis_Contig157.24.10 ID=mRNA_P-littoralis_Contig157.24.10|Name=mRNA_P-littoralis_Contig157.24.10|organism=Pylaiella littoralis U1_48|type=CDS|length=1896bp|location=Sequence derived from alignment at P-littoralis_Contig157:116308..123750- (Pylaiella littoralis U1_48)back to top |