mRNA_P-littoralis_Contig157.9.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig157.9.1 vs. uniprot
Match: A0A6H5KYK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK9_9PHAE) HSP 1 Score: 969 bits (2506), Expect = 5.750e-309 Identity = 633/1197 (52.88%), Postives = 751/1197 (62.74%), Query Frame = 2
Query: 785 SASAPSVSGVMTMSTEALAACEEGCQDGLAVAFDIQPYLTRCSCPEV--SRRMLGGWVTAGWTPAIVSPEERGY-LRRRLQVETAVPFTVTVPGINSDGLTLSINHFQGNYAKVSARLGVNTEAVEFSALQYSATAFAPITADSSNTDIQLIVGPPASDPSA-------VFLVALMLGTCGCILALLGLSRQRMKAKKAS--DAYLAAKVAGFSGSVSGASGSASVDD-EYYNNHNPVRTAGMLGPHGRAVAPVSIKAVSPTPSQTKQTGLFTDLTEATPPHDDPIYTEMIGTLGLFGTFYMSTEDMNFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEESHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEADAEFWQGLQV-----ATDALSRYDQIIVTARIVLMFDGSSGQSAVIRETVPLFQQVYRIIRSKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGVDGQSTTLDWVHGLQPDDLEKFLAEKKDQRLRVLCLDLDPTGIPQQALQEEDDVVKAAHSIRSGSSRTSAAQMELPFQGADDAPPSSALSPQGLMSVHEK-LDNQSMSFGGSMPTSPGSSLHSSNLLHHTLTADNSNTMRPIRGGVSDSAPASVITSNSSNFSDEQSVSAESPLSRMSAHSY---SLTSPAQ--------IRAPGDAAHDHDQNRHAFNSGTTRSS-------------------------RSGTGEAPRGX---SGQTGGIGN-------------------------------SSSFASSRYDDVYQEDSSVVSDTPEQ---AMGIFYPEEPSGRNLMLPQRREHSRESGAGSGAGGSXXXXXXXXXXXXXXXXXGDSGGRFVSHASPSLGNYRER---------PSGRGLVQSSSEYGDSQMGDADDGGSEVSSVSQQSEGSSAWNDTDAQSVPASYRGGRVGGAQGSYGGGPGIPSVAQRFVTGSRTPRTSGDTMDSQGESEGGLRESGSSPVVKEVELYE---DDLSVSE-GSVAAS--MDRFGSDMTYGQDTAAGSSLRSYALDSGVS--------QGVRGAPASGVP--GHQRQGLGRDFPSESSLASRVQGPASALGSHGMATSNFDSWRNSPGPGGHV---GDIEHTSSGDTANSSALEQHAQWMGSGMSQGDGDFGTVWLANRANARQFDERPD 4015
S +APSVSGV+TM+ A+ CE+GC+ GLA AFD+QPYL RCSCPEV +RR LGGW+T W VSP E Y LRRRL + F VTVPG + GL SIN+FQ NY +VS LGV++E V+FS+LQ+SAT+ +PIT ++SN+D+QL+V PPASD SA +FLVAL+LGTCGC+ A+LG RQR +AK+AS D + + + +GSVSGASG+ S D+ EYY+N NP+RT GML PHG+A+AP SIKAVSPTPSQTKQT LFT+L EATPP DPIYTEMIGTLGLFGTFYMS EDM+FCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCE+SHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAE +AEFWQGLQ ATD+LSRYDQIIVTARIVLMFDGSSGQSA IRE VPLFQQVY+IIR+KCPQWHEGNVQLMGVYLAITFLEYGLNSQTLG DGQSTTLDWVHGLQPDDLEKFLAEKK+QR+RVLCLDL+PTGIPQQAL+++D+VV AA+S++S SS S+ QMELPFQGADD PSSA+SPQGLMS+H++ D+QS+S+G SMP SPGSSL SSNL + + MR RGGV DSA SVITS+S+ +EQS ESPLSRMS HSY S+ S AQ +R G + D R F SG+T S RSG+G R G G G+ SSSFASS Y++VY + SSV S T + + ++ E+PSGRNL+ + + G S P +G YRE PS R + +S+ SSAWNDTDAQS T +R+ +SG T+ S G+SPVV+EV++Y+ + S+S G+ AAS S TY DTAAG S S+ G S GVR P+ P G+Q QG G S SS+ SRV G S +GSH + DSW+NSPGPGG G IE SG+T +SS LEQ A+ Q DGDFG VWLA+RA+ARQFD+ +
Sbjct: 1378 STNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVEFTRRSLGGWLTEEWNSTSVSPTEGFYYLRRRLDETSDAGFVVTVPGPTTSGLIQSINYFQNNYGRVSEALGVDSEDVQFSSLQFSATSISPITEEASNSDVQLVVNPPASDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRQRRRAKEASRQDFFSSKLMGSTAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQATRSRAATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGADGQSTTLDWVHGLQPDDLEKFLAEKKEQRMRVLCLDLEPTGIPQQALRDDDEVVGAANSLQSESSPASSTQMELPFQGADDETPSSAMSPQGLMSMHDQPFDDQSLSYG-SMPGSPGSSLLSSNLYTNRSLGGDREAMRQARGGVRDSASGSVITSSSNYSEEEQSEVPESPLSRMSVHSYGPSSMASSAQAGGRGSGGVRRHGTSPIDA---RQVFESGSTTSQSESEERHRGMSRGTSQDSEEVGGGFRSGSGSGRRSGVEGGGFRSGSGSGSXXXXXXXXXXXXXXXXXXXXXXXXLDGLASSSFASSHYNEVYGDSSSVESQTQRREDPTVENYFSEQPSGRNLLHVLTHQRGERTPRDEGR---------------------------QSQVGPGIGAYREXXXXXXXVHDPS-RSKIDGXXXXXXXXXXXXXXXXXXXXXXXSESDRSSAWNDTDAQSXXXXXXXXXXXXXX--------XXXXXXXXXTAARSAYSSGGTVQSG--------RHGTSPVVREVDVYDGVSSEASMSSAGTEAASRVQSEMTSTSTYDHDTAAGGSTASFQGGGGDSGRAHRRPGPGVRVPPSPSQPMLGYQ-QGYGS---SRSSIVSRVAGAESEMGSHRLVPPQ-DSWQNSPGPGGGASAEGGIERVLSGETTDSSILEQQARDRHGSGQQEDGDFGRVWLADRAHARQFDDADE 2521
BLAST of mRNA_P-littoralis_Contig157.9.1 vs. uniprot
Match: D8LG77_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG77_ECTSI) HSP 1 Score: 900 bits (2326), Expect = 8.990e-292 Identity = 496/703 (70.55%), Postives = 567/703 (80.65%), Query Frame = 2
Query: 785 SASAPSVSGVMTMSTEALAACEEGCQDGLAVAFDIQPYLTRCSCPEV--SRRMLGGWVTAGWTPAIVSPEERGY-LRRRLQVETAVPFTVTVPGINSDGLTLSINHFQGNYAKVSARLGVNTEAVEFSALQYSATAFAPITADSSNTDIQLIVGPPASDPSA-------VFLVALMLGTCGCILALLGLSRQRMKAKKAS--DAYLAAKVAGFSGSVSGASGSASVDD-EYYNNHNPVRTAGMLGPHGRAVAPVSIKAVSPTPSQTKQTGLFTDLTEATPPHDDPIYTEMIGTLGLFGTFYMSTEDMNFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEESHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEADAEFWQGLQVATDALSRYDQIIVTARIVLMFDGSSGQSAVIRETVPLFQQVYRIIRSKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGVDGQSTTLDWVHGLQPDDLEKFLAEKKDQRLRVLCLDLDPTGIPQQALQEEDDVVKAAHSIRSGSSRTSAAQMELPFQGADDAPPSSALSPQGLMSVHEK-LDNQSMSFGGSMPTSPGSSLHSSNLLHHTLTADNSNTMRPIRGGVSDSAPASVITSNSSNFSDEQSVSAESPLSRMSAHSY---SLTSPAQ--------IRAPGDAAHDHDQNRHAFNSGTTRS 2818
S +APSVSG +TMS A+ CE+GC+ GLA AFD+QPYL RCSCPEV SRR LGGW+T GW VSP E Y LRRRL+ + F VTVPG + GL SIN+FQ N+ +VS LGV++E V+FS+LQ+SAT+F+PIT ++SN D+QL+V PPASD SA +FLVAL+LGTCGC+ A+LG RQRM+AK+AS D + + + +GSVSGASG+ S D+ EYY+N NP+RT GML PHG+A+AP SIKAVSPTPSQTKQT LFT+L EATPP DPIYTEMIGTLGLFGTFYMS EDM+FCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCE+SHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAE +AEFWQGLQ ATD+LSRYDQIIVTARIVLMFDGSSGQSA IRE VPLFQQVY+IIR KCPQWHEGNVQLMGV LAITFLEYG NSQTLGVD QSTTLDWVHGLQPDDLEKFLAEKKDQR+RVLCLDL+PTGIPQQAL++ D+V++AA+S++S SS TS+AQMELPFQGADD PSSA+SPQGLMS+H++ D+QS+S+G SMP SPGSSL SSNL HT N MR RGGV DSA SVITS+S+ +EQS ESPLSRMSAHSY S+ S AQ +R G + D R F SG+T S
Sbjct: 882 STNAPSVSGALTMSLAAMEQCEDGCEVGLANAFDVQPYLVRCSCPEVEISRRSLGGWLTEGWNSTTVSPTEGSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALGVDSENVQFSSLQFSATSFSPITEEASNNDVQLVVNPPASDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRQRMRAKEASRKDFFSSKMMGSAAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQAATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRGKCPQWHEGNVQLMGVSLAITFLEYGFNSQTLGVDAQSTTLDWVHGLQPDDLEKFLAEKKDQRMRVLCLDLEPTGIPQQALRDNDEVIRAANSLQSESSPTSSAQMELPFQGADDETPSSAMSPQGLMSMHDQPFDDQSLSYG-SMPGSPGSSLLSSNL--HT----NREAMRQARGGVRDSASGSVITSSSNYSEEEQSEVPESPLSRMSAHSYGPSSMASSAQAGGRGSGGVRRHGTSPIDA---RQVFESGSTTS 1574
BLAST of mRNA_P-littoralis_Contig157.9.1 vs. uniprot
Match: D7G150_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G150_ECTSI) HSP 1 Score: 154 bits (388), Expect = 3.550e-35 Identity = 113/267 (42.32%), Postives = 141/267 (52.81%), Query Frame = 2
Query: 734 STRAPXXXXXXXXXXXXSASAPSVSGVMTMSTEALAACEEGCQDGLAVAFDIQPYLTRCSCPEVSRRMLGGWVTAGWTPAIVSPEERGYLRRRLQVETAVPFTVTVPGINSDGLTLSINHFQGNYAKVSARLGVNTEAVEFSALQYSATAFAPITADSSNTDIQLIVGPPASDPSA-------VFLVALMLGTCGCILALLGLSRQRMKAKKASDAYLAAKVAGFSGSVSGASGSASVDDEYYNNHNPVRTAGMLGPHGRAVAPVSI 1513
+T AP XXXXXXXXXXSA APSVSG + +S ALA CE GC +GLA AFD+QPY +C CPEV RR L + V P E YL RR VP+ VTVPGI + G+ SINHFQ NY +VS+ LGV + V FS L++ A + + I SN D+ L+V PPAS S + ++AL+LGTC C+ A+L K YL +R GML PH RA+ P S+
Sbjct: 253 TTAAPLPXXXXXXXXXXSAQAPSVSGFIIVSETALAQCEVGCVEGLAAAFDLQPYRVQCICPEVRRRSLRSMLANRRNVTSVHPSEGAYLSRRRLTTAEVPYVVTVPGITTQGMVQSINHFQANYMEVSSSLGVPGDEVVFSTLEFVAASSSHI----SNMDVPLLVNPPASGASTNAIGMFIICILALLLGTCVCLEAVLNFCG------KYCSTYL------------------------------IRARGMLAPHHRAIVPASM 479
BLAST of mRNA_P-littoralis_Contig157.9.1 vs. uniprot
Match: D8LG76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG76_ECTSI) HSP 1 Score: 111 bits (278), Expect = 1.740e-22 Identity = 101/258 (39.15%), Postives = 129/258 (50.00%), Query Frame = 2
Query: 3281 QSEGSSAWNDTDAQSVPASYRGGRVGGAQGSYGGGPGIPSVAQRFVTGSRTPRTSGDTMDSQGESEGGLRESGSSPVVKEVELYEDDLSV----SEGSVAASMDRFGSDMTYGQDTAAGSSLRSYAL---DSGVSQGVRGAPASGVPGHQRQGLGRDFP---SESSLASRVQGPASALGSHGMATSNFDSWRNSPGPGGHV---GDIEHTSSGDTANSSALEQHAQWMGSGMSQGDGDFGTVWLANRANARQFDERPD 4015
+S+ SSAWNDTDAQ T +R+ +SG T+ S G+SPVV+EV++Y+D S S G+ AAS + TY DTAAG S S+ DSG G+ ASG P ++ LG S SS+ SRV G S +GSH + DSW+NSPGPGG G IE SG+T +SS LEQ A+ Q DGDFG VWLA+RA+ARQFD+ +
Sbjct: 33 ESDRSSAWNDTDAQXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXTAARSAYSSGGTVQSG--------RHGTSPVVREVDVYDDVSSEASMSSAGTEAASRVQSEVTGTYDHDTAAGGSTTSFQAGGGDSGRGHRRPGSGASGAPSPGQRMLGYQQAYGSSRSSIVSRVAGAESEMGSHRLVPPQ-DSWQNSPGPGGGALAGGGIERVLSGETTDSSILEQQARDRHGSGQQEDGDFGRVWLADRAHARQFDDADE 278
BLAST of mRNA_P-littoralis_Contig157.9.1 vs. uniprot
Match: D7G5H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H2_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 1.080e-13 Identity = 70/250 (28.00%), Postives = 120/250 (48.00%), Query Frame = 2
Query: 1649 MSTEDMNFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCE---------ESHLTAD--------EKSLLATQLAPHWTNSEEARRALETAVVYTEAEA----DAEFWQGLQVATDALSRYDQIIVTARIVLMFDGSSGQ-------SAVIRETVPLFQQVYRIIRSKCPQWHEGNVQ--LMGVYLAITFLEYGLNSQTLGVDGQSTTLDWVHGLQPDDLEKFLAEKKDQRLRVLCLDLDPTGI 2308
M+T ++ FCAMR+YS+F++ + N +R ++ + + +P +Y+I+ C+ ES + +KSLLA LA W S +R+ L+ A+ T + FW + +TDALS D+++V AR+VL+ S+ + S VP + G++ L G +L E G+ + Q + WV+ L P+ L+ FL EK + R ++ LDL+P+G+
Sbjct: 1 MTTTEIAFCAMRMYSHFRRTEGNYKRLTVMQNAENVPPVYEIIWQCDGTSEGNPEGESRFFSSTSGTDAEQQKSLLACLLALSWDGSTSSRKTLQRALTPTRPSKVPSPEDIFWDEFKDSTDALSGDDEMVVVARMVLLVAESANKPGQDGVSSGASSSGVPPEATAGGGEEREKEGIEHGDIMQALSGAHLR----EIGIAIKEARPGWQEAHVQWVNLLTPEALDAFLVEKLEARRALVELDLEPSGL 246
BLAST of mRNA_P-littoralis_Contig157.9.1 vs. uniprot
Match: A0A0G4EB06_VITBC (Methyltransf_11 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EB06_VITBC) HSP 1 Score: 85.1 bits (209), Expect = 6.900e-13 Identity = 60/236 (25.42%), Postives = 110/236 (46.61%), Query Frame = 2
Query: 1571 TEATPPH--DDPIYTEMIGTLGLFGTFYMSTEDMNFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEESHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEADAEFWQGLQVATDALSRYDQIIVTARIVLMFDGSSGQSAVIRETVPLFQQVYRIIRSKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGVDGQSTTLDWVHGLQPDDLEKFLAEKKDQRL 2272
T+ PPH +DP Y M+G L + + + RL +F +A E+ + +D++ +P IY +L+ ++ LA+ LAP W N+E + AL + D FW L +D +S D++I A IV F G A +++ + + +++ +C +W + +VQL+ V LAIT + T G++ W+ +L+ L +++D ++
Sbjct: 326 TKRLPPHHTEDP-YEAMMGQL--WTARELEDAERQLVVARLTRDFNRADTESEQESFVDAVKGVPSIYRVLKEMNPVTFPPPLRAKLASLLAPQWKNTEAQQSALRQGLGLEPPSKD--FWLKLGQLSDDVSAEDRLIWLADIVPQFTGEPTHDAYVKQMIDVVPLAIDLVKERCQEWSDADVQLVAVDLAIT------DYMTEPPRGRARFYPWLKNFSRGELDDILRKRRDYKM 550 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig157.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig157.9.1 >prot_P-littoralis_Contig157.9.1 ID=prot_P-littoralis_Contig157.9.1|Name=mRNA_P-littoralis_Contig157.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1271bp MTPSIQPVVGQQPTVGPAGTPTADPIDVVPSPQPAPVVDGPTAPPVIVTPback to top mRNA from alignment at P-littoralis_Contig157:49530..63364+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig157.9.1 ID=mRNA_P-littoralis_Contig157.9.1|Name=mRNA_P-littoralis_Contig157.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=13835bp|location=Sequence derived from alignment at P-littoralis_Contig157:49530..63364+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig157:49530..63364+ >mRNA_P-littoralis_Contig157.9.1 ID=mRNA_P-littoralis_Contig157.9.1|Name=mRNA_P-littoralis_Contig157.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3813bp|location=Sequence derived from alignment at P-littoralis_Contig157:49530..63364+ (Pylaiella littoralis U1_48)back to top |