prot_P-littoralis_Contig1566.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1566.3.1
Unique Nameprot_P-littoralis_Contig1566.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length215
Homology
BLAST of mRNA_P-littoralis_Contig1566.3.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE)

HSP 1 Score: 372 bits (955), Expect = 1.480e-120
Identity = 203/313 (64.86%), Postives = 206/313 (65.81%), Query Frame = 0
Query:    1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKRT----------------------MLHGKGLLRP-----------------------------------------------------------------------------GAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSRGVAIH 214
            MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDK+                       ML   GL R                                                                              GAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSR V ++
Sbjct:  501 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNKGGEQRERVLEQARREQQSSPAEGPAAEGRAAARRQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSRVVWLY 813          
BLAST of mRNA_P-littoralis_Contig1566.3.1 vs. uniprot
Match: A0A6H5JD27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD27_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 3.310e-94
Identity = 167/296 (56.42%), Postives = 184/296 (62.16%), Query Frame = 0
Query:    1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDK----------------------RTMLHGKGLLR-----------------------------------------------------------PGAFK-AQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSRGVAIH 214
            M VG+QHDGYWTSD MCAQLPA IAM EL++GPHRQGVFIFDNSTGHN YD DALLAH I+LAPGGEK ALRVFED +GK V+PTFQ+GDTLLTD+KIFLPKTE QKK K RK GT LDK                        ML   GL R                                                            G +K A LNKV+QIFK+AGHVCIFLPKYHPELNAIERYWG +KHVLRLHCE SLTHML+IL  A+SGVPL+HIRAWSR V ++
Sbjct:  368 MPVGQQHDGYWTSDDMCAQLPAIIAMAELTSGPHRQGVFIFDNSTGHNPYDADALLAHNINLAPGGEKVALRVFEDVDGKKVYPTFQLGDTLLTDRKIFLPKTEEQKKNKKRKSGTALDKDKFPVGTKVVLRSPLLGLNKGGEQMLREMGLWRLRGEKRGLVKGCNKCKADNAAARQAIAAFNKGGEERERVLEQAWWEQQKFFHRGSRGSGRGCWKEAALNKVEQIFKEAGHVCIFLPKYHPELNAIERYWGSIKHVLRLHCEISLTHMLEILRGAMSGVPLDHIRAWSRVVWLY 663          
BLAST of mRNA_P-littoralis_Contig1566.3.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 3.740e-86
Identity = 158/281 (56.23%), Postives = 166/281 (59.07%), Query Frame = 0
Query:    1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKRT------MLHGK---GLLRPG------------------------------------------------------------------------------------------AFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCE 182
            MTVGKQ DGYWTSDRMCAQLPAA+A FEL+NGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEK ALRVFEDDNG+ VHPTFQ GDTLLTDKKIFLPKT  QKK+KGRK GTGLDK+       + HG    GL + G                                                                                          AFKAQLNKV+QIFK AGHVCIFLPKYHPELNAIE YWGYVKH LRLHCE
Sbjct:  553 MTVGKQQDGYWTSDRMCAQLPAALATFELTNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKTALRVFEDDNGRMVHPTFQDGDTLLTDKKIFLPKTPEQKKIKGRKHGTGLDKKQYPVGTKVTHGSPLLGLSKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKAENAASRQAIAAFNKGGEERERVLEQARXXXXXXXXXXXXXXXXXXXXXXRCCMERVFSDLRAFKAQLNKVEQIFKKAGHVCIFLPKYHPELNAIELYWGYVKHYLRLHCE 833          
BLAST of mRNA_P-littoralis_Contig1566.3.1 vs. uniprot
Match: D7FZS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS5_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 1.530e-72
Identity = 116/151 (76.82%), Postives = 126/151 (83.44%), Query Frame = 0
Query:    1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKRTMLHGKGLLRPGAFKAQLNKV-QQIFKDAG 150
            MTVGKQHDGYWTSDRMCAQLPAAIA FEL++GPHRQGV IFDNSTGHN YDDDALLAHK+SLAPGGEK ALRVFEDDNG+TVHPT Q+G TLLTDKKIFLPKTEAQ+K KGRKFGTGLDK+    G     PG+    LNK  +Q+ K  G
Sbjct:    1 MTVGKQHDGYWTSDRMCAQLPAAIATFELTHGPHRQGVSIFDNSTGHNTYDDDALLAHKMSLAPGGEKTALRVFEDDNGRTVHPTPQLGGTLLTDKKIFLPKTEAQEKTKGRKFGTGLDKKQYPFGTKAT-PGSPLLGLNKGGEQMLKGMG 150          
BLAST of mRNA_P-littoralis_Contig1566.3.1 vs. uniprot
Match: A0A6H5JT56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT56_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 2.820e-57
Identity = 122/328 (37.20%), Postives = 150/328 (45.73%), Query Frame = 0
Query:    1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRK-------------------FGTGLDKRTMLHGKGLLR-----------------PG-----------------------------------------------------------------------------------AFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSR 209
            MTVG+  DGYWT+DRMC Q+P  IA+ EL++ PHR  V +FDNSTGH AY++ AL+A  I   PGG +  L  F DD G  VH TF+ GDT+L D  ++  KT  Q + + R+                   F  G   RT     GL+                  PG                                                                                   AFK +LNK++++FK AGH+CIFL KYHPELNAIERYWGY KH+LRL CEYSL HML+ILP ALSGVPL  +R WSR
Sbjct:   91 MTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKIGSSLGDFNAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYAKHILRLSCEYSLPHMLEILPGALSGVPLGFVRGWSR 418          
BLAST of mRNA_P-littoralis_Contig1566.3.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 3.790e-56
Identity = 128/328 (39.02%), Postives = 154/328 (46.95%), Query Frame = 0
Query:    1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKT---------EAQKK---MKGRKFGTGLDK-------RTMLHGKGLLR-----------------PG-----------------------------------------------------------------------------------AFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSR 209
            MTVG+  DGYWT+DRMC Q+P  IA+ EL++ PHR  V +FDNSTGH AY++ AL+A  I   PGG +  L  F DD G  VH TF+ GDT+L D  ++  KT         EA KK    K  KFG+ L         RT     GL+                  PG                                                                                   AFK +LNK++++FK AGH+CIFL KYHPELNAIERYWGYVKH+LRL CEYSL HML+ILP ALSGVPL  +R WSR
Sbjct:  524 MTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKFGSSLGDFKAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSR 851          
BLAST of mRNA_P-littoralis_Contig1566.3.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 4.730e-54
Identity = 122/327 (37.31%), Postives = 150/327 (45.87%), Query Frame = 0
Query:    1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQ-----------------------------------------------------------------------KKMKGRKFGT----------------GLD---KRTMLHGKGLLRPG----------------------------AFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSR 209
            MTVG+  DG+W ++RMC Q+P  IA+ EL++ PHR  V +FDNSTGH AY+  AL+A  I+  PGG +A L  F DD G  V  TF+ GD LL   +++  KT  Q                                                                       K  KG +  T                 LD   +R    G+    PG                            AFK +LNK++++FK AGH+CIFL KYHPELNAIERYWGYVKH+LRLHCEYSL HMLKILP ALSGVPL  +R WSR
Sbjct:  934 MTVGQNQDGFWNNERMCKQIPGLIAIHELTSEPHRPLVMVFDNSTGHAAYETSALVASHINKGPGGGQAILDDFLDDEGNLVRTTFRAGDKLLFKAQVYAAKTPEQLKAEEEELKRNPKYKKPRNGDNLGEFAAGTEIRASGRTSRLIGQAKGGQQMLMEMGLWDVPGEDPVRVLECKACKGERAATRAAITSFNRGGEGRQQALDDAARRDETDGESAGSPGEGAAGGAAGNHVGTRSRCCIGRVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLHCEYSLKHMLKILPGALSGVPLRFMRGWSR 1260          
BLAST of mRNA_P-littoralis_Contig1566.3.1 vs. uniprot
Match: A0A6H5JZW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW5_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 2.310e-45
Identity = 77/84 (91.67%), Postives = 79/84 (94.05%), Query Frame = 0
Query:  133 GAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLK--ILPRALSGVPLEHIRAWSRGVAIH 214
            GAFKAQLNKVQQIFKDAGHVCIFLPKYH ELNAIERYWGYVKHVLRLHCEYSLTHMLK  ILPRALSGVPLEHIRAWSR V ++
Sbjct:    9 GAFKAQLNKVQQIFKDAGHVCIFLPKYHGELNAIERYWGYVKHVLRLHCEYSLTHMLKXKILPRALSGVPLEHIRAWSRVVWLY 92          
BLAST of mRNA_P-littoralis_Contig1566.3.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.450e-44
Identity = 111/307 (36.16%), Postives = 140/307 (45.60%), Query Frame = 0
Query:    1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQ---KKMKGRKFGT------------------------------GL-------------------------DKRTM-----------LHGKG-----------------------------LLRPGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSR 209
            + VGK  DGYW S+R+C QL A  A FE+S  P RQ + +FDNSTGHNAY  DAL A  I  +PGGE+   R FE  NG+T++ TF+ GD L      F  KTEA+   KK  G++ G                               GL                         DK TM           L G+G                             +    AFK Q+N+V+++F+ AGH CIFL KYHPELNAIER+WGY K + R  C+YS+  +L  LP  LS V L   R W+R
Sbjct:  199 LRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEY-NGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWAR 504          
BLAST of mRNA_P-littoralis_Contig1566.3.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.000e-43
Identity = 109/293 (37.20%), Postives = 137/293 (46.76%), Query Frame = 0
Query:    1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQ-------------------KKMKGRKFGTGL-------------------------DKRTM-----------LHGKG-----------------------------LLRPGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSR 209
            + VGK  DGYW S+R+C QL A  A FE+S  P RQ + +FDNSTGHNAY  DAL A  I  +PGGE+   R FE  NG+T++ TF+ GD L      F  KTEA+                   K MK      GL                         DK TM           L G+G                             +    AFK Q+N+V+++F+ AGH CIFL KYHPELNAI+R+WGY K + R  C+YS+  +L  LP  LS V L   R W+R
Sbjct:  330 LRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEY-NGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWAR 621          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1566.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJM4_9PHAE1.480e-12064.86Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD27_9PHAE3.310e-9456.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K550_9PHAE3.740e-8656.23Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FZS5_ECTSI1.530e-7276.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JT56_9PHAE2.820e-5737.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K659_9PHAE3.790e-5639.02Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ42_9PHAE4.730e-5437.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZW5_9PHAE2.310e-4591.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K344_9PHAE1.450e-4436.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2M3_9PHAE2.000e-4337.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 5..212
e-value: 3.7E-10
score: 41.6
NoneNo IPR availablePANTHERPTHR35871EXPRESSED PROTEINcoord: 135..178
coord: 4..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1566contigP-littoralis_Contig1566:6990..7929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1566.3.1mRNA_P-littoralis_Contig1566.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1566 6990..7929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1566.3.1 ID=prot_P-littoralis_Contig1566.3.1|Name=mRNA_P-littoralis_Contig1566.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=215bp
MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAY
DDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFL
PKTEAQKKMKGRKFGTGLDKRTMLHGKGLLRPGAFKAQLNKVQQIFKDAG
HVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVP
LEHIRAWSRGVAIH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf