prot_P-littoralis_Contig1564.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1564.4.1
Unique Nameprot_P-littoralis_Contig1564.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length68
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1564.4.1 vs. uniprot
Match: A0A6H5JJG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG9_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 6.040e-19
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0 
Query:    3 FFGVSETLISSCKGTEKARATSSIGRRPIRASRDHPKLERVVAFLVRHEHIFAQKMPHQDESYLYL 68
            FFGVSETLISSCK T KA+A+SS+ R  I ++RD PKLE VVAFL RHE ++ QKMP+ D+SYLYL
Sbjct:  214 FFGVSETLISSCKKTPKAQASSSVHRASIASTRDRPKLEGVVAFLHRHEDMYGQKMPNSDQSYLYL 279
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1564.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJG9_9PHAE6.040e-1968.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1564contigP-littoralis_Contig1564:8356..8987 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1564.4.1mRNA_P-littoralis_Contig1564.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1564 8356..8987 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1564.4.1 ID=prot_P-littoralis_Contig1564.4.1|Name=mRNA_P-littoralis_Contig1564.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=68bp
KLFFGVSETLISSCKGTEKARATSSIGRRPIRASRDHPKLERVVAFLVRH
EHIFAQKMPHQDESYLYL
back to top