mRNA_P-littoralis_Contig1560.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1560.5.1 vs. uniprot
Match: A0A340X6L1_LIPVE (30S ribosomal protein S3, chloroplastic n=3 Tax=cellular organisms TaxID=131567 RepID=A0A340X6L1_LIPVE) HSP 1 Score: 496 bits (1276), Expect = 3.950e-174 Identity = 254/344 (73.84%), Postives = 283/344 (82.27%), Query Frame = 1
Query: 1 MGQKVHPTGLRLGITTEHTSVWYADGPAYAEKLHEDLKVREYIRKRLAQASVSRIEIERPAQTARITIHTARPGIVIGKKGEDVERLRQQVAKLMGVPVHINIEEIRKPELDANLVAQNVXXXXXXXXXXXXXXXXXXQNAMRLGAQGIKVRVAGRLGGAEIARSETYHEGRVPLHTLRADVDYATAEALTTYGILGVKVWIFKGEVLGAREESAAQQNTQSRNRGLAHRGSSVSFGEFGLKATGRGRMTARQIEAGRRAMTRHVKRGGQIWIRVFPDKPITSKPLEVRQGKGKGNVEYWVAQIKPGKVLYEMEGVPEELAREAFRLAAAKLPFPTAFVKRQVM 1032
MGQKVHPTG+RLGI EHTSVWYADG YA+ L +DLK REY+ +L ASVSRI+I RPAQTARITIHTARPGIVIGKKGEDVE+LRQ + K MGVPVHINIEEIRKPELDA LVAQ+V QNAMR+GA+GIK++V+GRLGGAEIAR+E Y EGRVPLHTLRAD+DY T EA TTYG++GVKVWIFKGEV+G R+E Q T NRGLA RGS VSFGEF LKA RGR+TARQIE+ RRA+TRHVKRGG+IWIRVFPDKPI+ KPLEVR GKGKG+VEYWVAQI+PGKVLYE+EGV EELAREAF LAAAKLP T+FVKR VM
Sbjct: 1 MGQKVHPTGIRLGIVKEHTSVWYADGATYADYLLKDLKTREYLHDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQMT-GHNRGLALRGSKVSFGEFALKAVARGRLTARQIESARRALTRHVKRGGKIWIRVFPDKPISKKPLEVRMGKGKGSVEYWVAQIQPGKVLYEIEGVSEELAREAFALAAAKLPLATSFVKRTVM 343
BLAST of mRNA_P-littoralis_Contig1560.5.1 vs. uniprot
Match: A0A6L5C9X3_9INSE (30S ribosomal protein S3, chloroplastic n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5C9X3_9INSE) HSP 1 Score: 434 bits (1115), Expect = 1.180e-147 Identity = 238/381 (62.47%), Postives = 288/381 (75.59%), Query Frame = 1
Query: 1 MGQKVHPTGLRLGITTEHTSVWYADGPAYAEKLHEDLKVREYIRKRLAQASVSRIEIERPAQTARITIHTARPGIVIGKKGEDVERLRQQVAKLMGVPVHINIEEIRKPELDANLVAQNVXXXXXXXXXXXXXXXXXXQNAMRLGAQGIKVRVAGRLGGAEIARSETYHEGRVPLHTLRADVDYATAEALTTYGILGVKVWIFKGEVLGAREESAAQQNT--------------------------------------QSRNRGLAHRGSSVSFGEFGLKATGRGRMTARQIEAGRRAMTRHVKRGGQIWIRVFPDKPITSKPLEVRQGKGKGNVEYWVAQIKPGKVLYEMEGVPEELAREAFRLAAAKLPFPTAFVKRQV 1029
MGQK+HPTG RL +T S WYA+ + LHED+KVREY++++LA ASV R+ IERPA+ AR+T+++ARPG+VIGKKGED+E+LR + ++MGVPVH++IEEIRKPELDA L+A + XXXXXXXXXXXXXXXXXX MRLGAQGIKV AGRL GAEIARSE Y EGRVPLHTLRAD+DYAT+EALTTYGI+G+KVW++KG++L E+ A ++ + RN G+A RG+ VSFGE+GLKATGRGR+TARQIEA RRAMTRH+KRGG+IWIR+FPDKP++ KPLEVR G GKGN EYWVA+I+PGKVLYEM+GV E LAREAF LAAAKLP T FV R +
Sbjct: 96 MGQKIHPTGFRLAVTKNWGSRWYANSKDFPGMLHEDIKVREYLKRKLAHASVGRVLIERPAKNARVTVYSARPGVVIGKKGEDIEQLRTDLQRIMGVPVHVSIEEIRKPELDAQLIADSXXXXXXXXXXXXXXXXXXXXXXMRLGAQGIKVMSAGRLNGAEIARSEWYREGRVPLHTLRADIDYATSEALTTYGIIGIKVWVYKGDMLDRNEQPAGEEPAGEDRRSRRTPAKPEGDKPRTRTVLNMLQPSRTKFRKAHKGRNEGVATRGAKVSFGEWGLKATGRGRLTARQIEAARRAMTRHIKRGGRIWIRIFPDKPVSKKPLEVRMGNGKGNPEYWVAEIQPGKVLYEMDGVNEALAREAFALAAAKLPIATTFVTRHL 476
BLAST of mRNA_P-littoralis_Contig1560.5.1 vs. uniprot
Match: UPI00129E63AF (uncharacterized protein LOC116252365 n=1 Tax=Nymphaea colorata TaxID=210225 RepID=UPI00129E63AF) HSP 1 Score: 426 bits (1094), Expect = 1.930e-146 Identity = 215/345 (62.32%), Postives = 269/345 (77.97%), Query Frame = 1
Query: 1 MGQKVHPTGLRLGITTEHTSVWYADGPAYAEKLHEDLKVREYIRKRLAQASVSRIEIERPAQTARITIHTARPGIVIGKKGEDVERLRQQVAKLMGVPVHINIEEIRKPELDANLVAQNVXXXXXXXXXXXXXXXXXXQNAMRLGAQGIKVRVAGRLGGAEIARSETYHEGRVPLHTLRADVDYATAEALTTYGILGVKVWIFKGEVLGARE-ESAAQQNTQSRNRGLAHRGSSVSFGEFGLKATGRGRMTARQIEAGRRAMTRHVKRGGQIWIRVFPDKPITSKPLEVRQGKGKGNVEYWVAQIKPGKVLYEMEGVPEELAREAFRLAAAKLPFPTAFVKRQVM 1032
MGQKVHP G+RLGI + SVW+A+ +A+ L D KVR+++ K+L +AS+SRI IERPA++ R+TI+TARPGIVIGKKGEDVE+LR ++AK+ GVP INI E+RKPELDA LV++++ QNAMR GA+GIKV V+GRLGGAEIAR E Y EGRVPLHTLRA++DY +EA TTYG++GVKVWIFKGE+LG + ++ + RNRGL G+++SFG FGLKA RGR+TARQIE+ RRA+TR++KR G+IWIRVFPDKPIT KPLEVR GKGKGNVEYWVA I+PGK+LYE++G+ EE +REAF+LAAAKLP T FV + VM
Sbjct: 1 MGQKVHPNGMRLGIIKKWNSVWFANSKDFADHLDSDYKVRQFLMKKLIKASISRIIIERPAKSIRVTIYTARPGIVIGKKGEDVEKLRIKIAKITGVPAQINISEVRKPELDAKLVSESITSQLERRVMFRRAMKRSVQNAMRQGAKGIKVEVSGRLGGAEIARREWYREGRVPLHTLRAEIDYNVSEAHTTYGVIGVKVWIFKGEILGGMSTRTKFRKMHKGRNRGLVV-GANISFGIFGLKAIDRGRLTARQIESARRAITRYIKRQGKIWIRVFPDKPITQKPLEVRMGKGKGNVEYWVALIQPGKILYEIDGISEEESREAFKLAAAKLPIKTTFVTKMVM 344
BLAST of mRNA_P-littoralis_Contig1560.5.1 vs. uniprot
Match: UPI0018999657 (30S ribosomal protein S3-like n=1 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI0018999657) HSP 1 Score: 421 bits (1081), Expect = 1.820e-144 Identity = 207/344 (60.17%), Postives = 269/344 (78.20%), Query Frame = 1
Query: 1 MGQKVHPTGLRLGITTEHTSVWYADGPAYAEKLHEDLKVREYIRKRLAQASVSRIEIERPAQTARITIHTARPGIVIGKKGEDVERLRQQVAKLMGVPVHINIEEIRKPELDANLVAQNVXXXXXXXXXXXXXXXXXXQNAMRLGAQGIKVRVAGRLGGAEIARSETYHEGRVPLHTLRADVDYATAEALTTYGILGVKVWIFKGEVLGAREESAAQQNTQSRNRGLAHRGSSVSFGEFGLKATGRGRMTARQIEAGRRAMTRHVKRGGQIWIRVFPDKPITSKPLEVRQGKGKGNVEYWVAQIKPGKVLYEMEGVPEELAREAFRLAAAKLPFPTAFVKRQVM 1032
MGQKV+P G+RLG+T + TS WYAD +A+ L++DLKVR+++ +RL A++SRI+IERPA+ A+I I++ARPG++IGKKG ++E LR +++K++ VPVHI IEEIRKPELDA LVA++V QN +R GA GIK+ V+GRLGGAEIAR+E Y EGRVPLHT RAD+DYATA A TTYG +GVKVWIFKGE+ R ++ +++ + RNR +AHRG+ VSFGEFGLKAT R+TARQ+E+ RRA++RH+KRGG+I IR+FPDKPIT KPLEVRQGKGKG+VEYWVA ++PG++L+E+EG+ E LAREA AAKLP FVKR +M
Sbjct: 1 MGQKVNPVGIRLGVTRDWTSNWYADKKDFADHLNDDLKVRQFLEERLKGAAISRIQIERPARNAKIAIYSARPGVIIGKKGGEIEALRVEISKVIKVPVHITIEEIRKPELDAKLVAESVAQQLERRVMFRRAMKRAVQNTLRQGAFGIKISVSGRLGGAEIARTEWYREGRVPLHTFRADIDYATATAKTTYGTIGVKVWIFKGEIHAMRAKTKYRKDFKGRNRRVAHRGNRVSFGEFGLKATAYARITARQLESARRALSRHIKRGGKIIIRIFPDKPITKKPLEVRQGKGKGSVEYWVALVQPGRMLFEIEGIDEVLAREALDRTAAKLPVKCVFVKRTIM 344
BLAST of mRNA_P-littoralis_Contig1560.5.1 vs. uniprot
Match: A0A6A5L4X0_LUPAL (30S ribosomal protein S3, chloroplastic n=4 Tax=cellular organisms TaxID=131567 RepID=A0A6A5L4X0_LUPAL) HSP 1 Score: 420 bits (1079), Expect = 7.370e-144 Identity = 231/364 (63.46%), Postives = 280/364 (76.92%), Query Frame = 1
Query: 1 MGQKVHPTGLRLGITTEHTSVWYADGPAYAEKLHEDLKVREYIRKRLAQASVSRIEIERPAQTARITIHTARPGIVIGKKGEDVERLRQQVAKLMGVPVHINIEEIRKPELDANLVAQNVXXXXXXXXXXXXXXXXXXQNAMRLGAQGIKVRVAGRLGGAEIARSETYHEGRVPLHTLRADVDYATAEALTTYGILGVKVWIFKGEVLG---------------------AREESAAQQNTQSRNRGLAHRGSSVSFGEFGLKATGRGRMTARQIEAGRRAMTRHVKRGGQIWIRVFPDKPITSKPLEVRQGKGKGNVEYWVAQIKPGKVLYEMEGVPEELAREAFRLAAAKLPFPTAFVKRQV 1029
MGQK+HP G RL + S WY++ + L D+KVRE++ K+LA A+VSRI IERPA+ A+ITIH+ARPG+VIGKKGED+E LR + LMGVPVH+NIEE+RKPELDA L+AQ+ XXXXXXXXXXXXXXXXXX MRLGAQGIK+ +GRL G EIAR+E Y EGRVPLHTLRAD+DY AEA TTYGI+G+KVW+FKGE+ G AR++ Q + RN+G+A G+ VSFGEFGLKA GRGR+TARQIEA RR MTRH+KRGG++WIRVFPD+PI+ KP EVR G GKG+V+Y++AQI+PGK+LYEM+GV EELAREAFRLAAAKLP T F+ RQ+
Sbjct: 1 MGQKIHPIGFRLSVQKNWASRWYSNSQNFPAMLQGDIKVREFLNKKLASAAVSRIVIERPAKNAKITIHSARPGVVIGKKGEDIESLRSSLQGLMGVPVHLNIEEVRKPELDATLIAQSXXXXXXXXXXXXXXXXXXXXXXMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRADIDYGVAEASTTYGIIGIKVWVFKGEIFGDNAAANAAVADVEPEKKMLQPARQKYRKMQ--KGRNKGIATTGNKVSFGEFGLKAIGRGRLTARQIEAARRVMTRHIKRGGRVWIRVFPDQPISKKPAEVRMGNGKGSVDYYIAQIQPGKMLYEMDGVSEELAREAFRLAAAKLPVETTFMTRQI 362
BLAST of mRNA_P-littoralis_Contig1560.5.1 vs. uniprot
Match: A0A8B7P785_HYAAZ (30S ribosomal protein S3, chloroplastic n=2 Tax=cellular organisms TaxID=131567 RepID=A0A8B7P785_HYAAZ) HSP 1 Score: 408 bits (1048), Expect = 1.740e-138 Identity = 210/341 (61.58%), Postives = 262/341 (76.83%), Query Frame = 1
Query: 1 MGQKVHPTGLRLGITTEHTSVWYADGPAYAEKLHEDLKVREYIRKRLAQASVSRIEIERPAQTARITIHTARPGIVIGKKGEDVERLRQQVAKLMGVPVHINIEEIRKPELDANLVAQNVXXXXXXXXXXXXXXXXXXQNAMRLGAQGIKVRVAGRLGGAEIARSETYHEGRVPLHTLRADVDYATAEALTTYGILGVKVWIFKGEVLG-AREESAAQQNTQSRNRGLAHRGSSVSFGEFGLKATGRGRMTARQIEAGRRAMTRHVKRGGQIWIRVFPDKPITSKPLEVRQGKGKGNVEYWVAQIKPGKVLYEMEGVPEELAREAFRLAAAKLPFPTAFVK 1020
MGQK+HPTG RL +T S WYA +A L EDL VREY++ +L A+VSRI IERPA+ ARITI++ARPG+VIGKKGED+E L+ ++ K +GVPV +NIEE+RKPE+DA L+A ++ XXXQNAMRLGAQGIK+ AGRL G EIAR+E Y EGRVPLHTL+AD+DY +EA TTYG++GVKVW+++G+ L AR + +Q + RN G+A RG+ VSFG+FGLKAT RGR+TARQIEA RRA++RH+KRGG+I+IR+FPDKPI+ KP EVR G GKGN EY+VA+I+PGKVLYE+ GVPE LAREAF LAAAKLP F +
Sbjct: 1 MGQKIHPTGFRLPVTRAWASRWYASNKNFAGMLAEDLDVREYLKAKLKSAAVSRILIERPAKNARITIYSARPGVVIGKKGEDIENLKAELTKRLGVPVAVNIEEVRKPEIDAQLIADSITQQLEKRIMFRRAMKXXXQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLKADIDYGFSEAKTTYGVIGVKVWVYRGDRLANARRKYRKEQ--KGRNTGVATRGALVSFGDFGLKATERGRLTARQIEAARRAISRHIKRGGRIFIRIFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKVLYEINGVPEALAREAFTLAAAKLPLRCTFTQ 339
BLAST of mRNA_P-littoralis_Contig1560.5.1 vs. uniprot
Match: A0A420HQS6_9PEZI (30S ribosomal protein S3, chloroplastic n=2 Tax=cellular organisms TaxID=131567 RepID=A0A420HQS6_9PEZI) HSP 1 Score: 398 bits (1022), Expect = 3.090e-135 Identity = 211/363 (58.13%), Postives = 262/363 (72.18%), Query Frame = 1
Query: 28 LRLGITTEHTSVWYADGPAYAEKLHEDLKVREYIRKRLAQASVSRIEIERPAQTARITIHTARPGIVIGKKGEDVERLRQQVAKLMGVPVHINIEEIRKPELDANLVAQNVXXXXXXXXXXXXXXXXXXQNAMRLGAQGIKVRVAGRLGGAEIARSETYHEGRVPLHTLRADVDYATAEALTTYGILGVKVWIFKGEVLGAR------EESAAQQNTQS----------------------RNRGLAHRGSSVSFGEFGLKATGRGRMTARQIEAGRRAMTRHVKRGGQIWIRVFPDKPITSKPLEVRQGKGKGNVEYWVAQIKPGKVLYEMEGVPEELAREAFRLAAAKLPFPTAFVKRQVM 1032
+RLGI + SVW+A+ +A+ L D KVR+++ K L++ASVSRI IERPA++ R+TI+TARPGIVIGKKGEDVE+LR + K+ GVPV INI E+RKPELDA LV+ ++ QNAMR GA+GIKV V+GRLGGAEIAR E Y EGRVPLHTLRA++DY+ +EA TTYG++GVKVWIFKGE+LG E+ + Q+ Q+ RNRGLA G+ V+FG FGLKA RGR+TARQIE+ RRA+TR +KR G++WIR+FPDKPIT KPLEVR GKGKGNVEYWVA ++PGK+LYE++GV EE +REAFRLAAAKLP T FV + VM
Sbjct: 1 MRLGIIKKWNSVWFANTKDFADHLDGDYKVRQFLMKELSKASVSRIIIERPAKSIRVTIYTARPGIVIGKKGEDVEKLRTTIGKITGVPVQINISEVRKPELDAKLVSDSITSQLERRVMFRRAMKRSVQNAMRQGAKGIKVEVSGRLGGAEIARREWYREGRVPLHTLRANIDYSISEAHTTYGVIGVKVWIFKGEILGGMATIEKLEKPSIQKKKQNQGKEGLIMLQPKRTKFRKMHKGRNRGLAS-GTDVNFGVFGLKAIDRGRLTARQIESARRAITRCIKRQGKMWIRIFPDKPITQKPLEVRMGKGKGNVEYWVALVQPGKILYELDGVTEEESREAFRLAAAKLPIRTIFVTKMVM 362
BLAST of mRNA_P-littoralis_Contig1560.5.1 vs. uniprot
Match: UPI00096B08E4 (uncharacterized protein LOC100635542 n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096B08E4) HSP 1 Score: 401 bits (1030), Expect = 8.620e-133 Identity = 207/323 (64.09%), Postives = 250/323 (77.40%), Query Frame = 1
Query: 61 VWYADGPAYAEKLHE-DLKVREYIRKRLAQASVSRIEIERPAQTARITIHTARPGIVIGKKGEDVERLRQQVAKLMGVPVHINIEEIRKPELDANLVAQNVXXXXXXXXXXXXXXXXXXQNAMRLGAQGIKVRVAGRLGGAEIARSETYHEGRVPLHTLRADVDYATAEALTTYGILGVKVWIFKGEVLGAREESAAQQNTQS-RNRGLAHRGSSVSFGEFGLKATGRGRMTARQIEAGRRAMTRHVKRGGQIWIRVFPDKPITSKPLEVRQGKGKGNVEYWVAQIKPGKVLYEMEGVPEELAREAFRLAAAKLPFPTAFVKR 1023
+W G +A + L VR +IRKRL ASVSRI IERPA++ARI IHTARPGIVIGKKGED+E LR +++K+MG+ VH+ +EEIRKPE+DA LV++++ NAMRLGAQG+KVRV+GRL GAEIARSE Y EGRVPLHTLRAD+DY +EA TTYGI+GVKVWIFKGE+L + ++ TQ+ RNRGLA G+ VSFGE+G+ AT RGR+TARQIEA RRA+TR V+RG ++WIR+FPDKPIT KPLEVRQGKGKGNVEYWVA I+PG++LYEM+GV E LAREAFRLA AKLP T F+ R
Sbjct: 303 IWRGGGVTFAARPRSFKLAVRSHIRKRLKHASVSRITIERPAKSARIVIHTARPGIVIGKKGEDIESLRNEISKMMGIQVHVAVEEIRKPEIDAYLVSESIANQLERRIMFRRAMRRAVTNAMRLGAQGVKVRVSGRLNGAEIARSEWYREGRVPLHTLRADIDYGFSEAKTTYGIIGVKVWIFKGEILSRAD---LEEKTQAGRNRGLATVGNRVSFGEYGMMATTRGRITARQIEAARRAITRKVRRGAKVWIRIFPDKPITKKPLEVRQGKGKGNVEYWVALIQPGRMLYEMQGVEESLAREAFRLAGAKLPVRTTFINR 622
BLAST of mRNA_P-littoralis_Contig1560.5.1 vs. uniprot
Match: A0A1U8N0I4_GOSHI (30S ribosomal protein S3, chloroplastic n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8N0I4_GOSHI) HSP 1 Score: 388 bits (997), Expect = 1.070e-131 Identity = 187/346 (54.05%), Postives = 259/346 (74.86%), Query Frame = 1
Query: 1 MGQKVHPTGLRLGITTEHTSVWYADGPAYAEKLHEDLKVREYIRKRL--AQASVSRIEIERPAQTARITIHTARPGIVIGKKGEDVERLRQQVAKLMGVPVHINIEEIRKPELDANLVAQNVXXXXXXXXXXXXXXXXXXQNAMRLGAQGIKVRVAGRLGGAEIARSETYHEGRVPLHTLRADVDYATAEALTTYGILGVKVWIFKGEVLGAREESAAQQNTQSRNRGLAHRGSSVSFGEFGLKATGRGRMTARQIEAGRRAMTRHVKRGGQIWIRVFPDKPITSKPLEVRQGKGKGNVEYWVAQIKPGKVLYEMEGVPEELAREAFRLAAAKLPFPTAFVKRQVM 1032
MG+KVHP G+RLG+ H S WYA+ ++ L +D+++R I RL A ++SRI IER A A + ++TARPG ++G KG++V++LR +V K+MGV V I+IEEI+ PE+DA ++AQ + Q A+R GA+G+K++++GRLGG+EIAR Y EGRVPLHTLRA++D+ EA T+YG++G+KVW+FKGE +G ++ +Q + RNRG+A+RG+ V FGEFG+KA ++T+RQIEAGRRA+TRHVKRGG+IWIRVFPDKPIT KPLEVR GKGKG+VE+WVAQIKPG+++YE+EGV E++A+EA LAA K+PF T FV++ +M
Sbjct: 1 MGKKVHPIGMRLGVIKNHLSTWYAEQKQFSSLLKKDIEIRNLIESRLNYANINISRICIERTANNASVIVYTARPGRIVGSKGDEVDKLRDEVNKIMGVKVQIDIEEIKTPEIDAKIIAQKIALQLEKRVMFRRVMKRAVQLAIRFGAKGVKIKLSGRLGGSEIARKAWYKEGRVPLHTLRANIDFYKEEAFTSYGVIGIKVWVFKGERIGPKKTKYRKQQ-KGRNRGVANRGNDVKFGEFGMKALVNSKITSRQIEAGRRAITRHVKRGGKIWIRVFPDKPITKKPLEVRMGKGKGSVEFWVAQIKPGRIIYEIEGVNEDVAKEALGLAAQKMPFITQFVEKVIM 345
BLAST of mRNA_P-littoralis_Contig1560.5.1 vs. uniprot
Match: A0A812IRX3_SYMPI (30S ribosomal protein S3, chloroplastic n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IRX3_SYMPI) HSP 1 Score: 416 bits (1069), Expect = 5.260e-131 Identity = 233/316 (73.73%), Postives = 255/316 (80.70%), Query Frame = 1
Query: 37 GITTEHTSVWYADGPAYAEKLHEDLKVREYIRKRLAQASVSRIEIERPAQTARITIHTARPGIVIGKKGEDVERLRQQVAKLMGVPVHINIEEIRKPELDANLVAQNVXXXXXXXXXXXXXXXXXXQNAMRLGAQGIKVRVAGRLGGAEIARSETYHEGRVPLHTLRADVDYATAEALTTYGILGVKVWIFKGEVLGAREESAAQQNTQSRNRGLAHRGSSVSFGEFGLKATGRGRMTARQIEAGRRAMTRHVKRGGQIWIRVFPDKPITSKPLEVRQGKGKGNVEYWVAQIKPGKVLYEMEGVPEELAREAFRLA 984
GI +HTSVWYAD YA L DL VR+Y+RKRLA AS+SRI+IERPAQTARITIHTARPGIVIGKKGEDVERLR ++AK MG+PVH+NIEEIRKPELDA LV XXXXXXXXXXXXXXXX QNAMRLGA+GIKVRVAGRLGGAEIARSE YHEGRVPLHTLRAD+DY+T EALTTYGI+G+KVWIFKGEV+G A GRGRMTARQIEAGRRAM RH+KRGG+ WIRVFPDKPIT KPLEVRQGKGKG+VEYWVA I+PG+V+YEMEGVPEE+AREAF LA
Sbjct: 732 GIVKDHTSVWYADKKTYAGYLLNDLAVRDYLRKRLADASISRIDIERPAQTARITIHTARPGIVIGKKGEDVERLRVELAKRMGMPVHVNIEEIRKPELDAQLVXXXXXXXXXXXXXXXXXXXXVIQNAMRLGAEGIKVRVAGRLGGAEIARSEVYHEGRVPLHTLRADIDYSTCEALTTYGIIGIKVWIFKGEVIGTA-------------------------------AVGRGRMTARQIEAGRRAMVRHIKRGGKTWIRVFPDKPITKKPLEVRQGKGKGSVEYWVALIQPGRVIYEMEGVPEEVAREAFTLA 1016 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1560.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1560.5.1 >prot_P-littoralis_Contig1560.5.1 ID=prot_P-littoralis_Contig1560.5.1|Name=mRNA_P-littoralis_Contig1560.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp MGQKVHPTGLRLGITTEHTSVWYADGPAYAEKLHEDLKVREYIRKRLAQAback to top mRNA from alignment at P-littoralis_Contig1560:6465..7560+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1560.5.1 ID=mRNA_P-littoralis_Contig1560.5.1|Name=mRNA_P-littoralis_Contig1560.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1096bp|location=Sequence derived from alignment at P-littoralis_Contig1560:6465..7560+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1560:6465..7560+ >mRNA_P-littoralis_Contig1560.5.1 ID=mRNA_P-littoralis_Contig1560.5.1|Name=mRNA_P-littoralis_Contig1560.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1035bp|location=Sequence derived from alignment at P-littoralis_Contig1560:6465..7560+ (Pylaiella littoralis U1_48)back to top |