mRNA_P-littoralis_Contig1560.2.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1560.2.1
Unique NamemRNA_P-littoralis_Contig1560.2.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1560.2.1 vs. uniprot
Match: A0A1Z8RL88_9GAMM (Elongation factor Tu n=16 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z8RL88_9GAMM)

HSP 1 Score: 733 bits (1893), Expect = 2.380e-266
Identity = 359/394 (91.12%), Postives = 381/394 (96.70%), Query Frame = 1
Query:    1 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAEAYGGDFQAFDQIDNAPEERERGITIATSHVEYDSPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPYIVVFLNKADLVDDEELLELVEMEVRELLDQYDFPGDDTPIIVGSALKALEGDTSDIGAPAVQKLVETLDEYIPEPERAIDQPFLMPIEDVFSISGRGTVVTGRVTRGIIKVSEEIEIVGIRETQTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVLSKPGSITPHTKFEGEVYVLSKEEGGRHTPFFKGYKPQFFFETTDVTGSCELPEGTEMVMPGDNVNLTTELIAPIAMEEGQRFAIREGGRTVGAGVVTKI 1182
            MSKEKFERTKPH+NVGTIGHVDHGKTTLTAAIT+VCAEAYGG+ QAFDQIDNAPEERERGITIATSHVEYDSP+RHYAHVDCPGHADYVKNMITGAAQMDGAILV SAADGPMPQTREHILLSKQVGVPYIVVFLNKAD+VDDEELLELVEMEVRELLDQYDFPGDDTPI++GSALKALEGDTSD+G P+VQKLVETLDEYIPEPER +DQPFLMPIEDVFSISGRGTVVTGR+ RGI+KV +++EIVGI+ T+TTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRE+VERGQVL+KPG+ITPHTKF GEVYVLSK+EGGRHTPFFKGYKPQFFFETTDVTGS ELPEGTEMVMPGDNV +  ELIAPIAMEEGQRFAIREGGRTVGAGVVT I
Sbjct:    1 MSKEKFERTKPHLNVGTIGHVDHGKTTLTAAITRVCAEAYGGEMQAFDQIDNAPEERERGITIATSHVEYDSPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPYIVVFLNKADMVDDEELLELVEMEVRELLDQYDFPGDDTPIVIGSALKALEGDTSDVGMPSVQKLVETLDEYIPEPERDVDQPFLMPIEDVFSISGRGTVVTGRIGRGIVKVGDDVEIVGIKATETTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREEVERGQVLAKPGTITPHTKFAGEVYVLSKDEGGRHTPFFKGYKPQFFFETTDVTGSVELPEGTEMVMPGDNVTMNVELIAPIAMEEGQRFAIREGGRTVGAGVVTAI 394          
BLAST of mRNA_P-littoralis_Contig1560.2.1 vs. uniprot
Match: A0A2E8WPN9_9GAMM (Elongation factor Tu n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8WPN9_9GAMM)

HSP 1 Score: 721 bits (1862), Expect = 1.260e-261
Identity = 355/396 (89.65%), Postives = 375/396 (94.70%), Query Frame = 1
Query:    1 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAEAYGGDFQAFDQIDNAPEERERGITIATSHVEYDSPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPYIVVFLNKADLVDDEELLELVEMEVRELLDQYDFPGDDTPIIVGSALKALEGDTSDIGAPAVQKLVETLDEYIPEPERAIDQPFLMPIEDVFSISGRGTVVTGRVTRGIIKVSEEIEIVGIRETQTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVLSKPGSITPHTKFEGEVYVLSKEEGGRHTPFFKGYKPQFFFETTDVTGSCELPEGTEMVMPGDNVNLTTELIAPIAMEEGQRFAIREGGRTVGAGVVTKIIE 1188
            MSKEKFER KPHVNVGTIGHVDHGKTTLTAAITKVCAE YGG+ +AFDQIDNAPEE+ RGITI+TSHVEYDSP RHYAHVDCPGHADYVKNMITGAAQMDGAILV SAADGPMPQTREHILLSKQVGVP+IVVFLNKAD+VDDEELLELVEMEVRELLDQYDFPGDDTPI++GSALKALEGD+SDIG  ++ KLVETLD YIPEP RA+DQPFLMPIEDVFSISGRGTVVTGR+ RGI+ V +E+EIVGIRET+ TTCTGVEMFRKLLDEGRAGENVGVLLRGTKRE+VERGQVL+KPGSITPHTKF  EVYVLSK+EGGRHTPFFKGYKPQFFFETTDVTGSCELP GTEMVMPGDNVNL  ELIAPIAMEEGQRFAIREGGRTVGAGVVTKI E
Sbjct:    1 MSKEKFERKKPHVNVGTIGHVDHGKTTLTAAITKVCAEVYGGEARAFDQIDNAPEEKARGITISTSHVEYDSPDRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKADMVDDEELLELVEMEVRELLDQYDFPGDDTPIVIGSALKALEGDSSDIGVNSITKLVETLDSYIPEPVRAVDQPFLMPIEDVFSISGRGTVVTGRIARGIVTVQDEVEIVGIRETEKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREEVERGQVLAKPGSITPHTKFSSEVYVLSKDEGGRHTPFFKGYKPQFFFETTDVTGSCELPAGTEMVMPGDNVNLEVELIAPIAMEEGQRFAIREGGRTVGAGVVTKIAE 396          
BLAST of mRNA_P-littoralis_Contig1560.2.1 vs. uniprot
Match: A0A2E9EBT7_9GAMM (Elongation factor Tu n=6 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A2E9EBT7_9GAMM)

HSP 1 Score: 719 bits (1856), Expect = 1.070e-260
Identity = 357/397 (89.92%), Postives = 378/397 (95.21%), Query Frame = 1
Query:    1 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAEAYGG-DFQAFDQIDNAPEERERGITIATSHVEYDSPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPYIVVFLNKADLVDDEELLELVEMEVRELLDQYDFPGDDTPIIVGSALKALEGDTSDIGAPAVQKLVETLDEYIPEPERAIDQPFLMPIEDVFSISGRGTVVTGRVTRGIIKVSEEIEIVGIRETQTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVLSKPGSITPHTKFEGEVYVLSKEEGGRHTPFFKGYKPQFFFETTDVTGSCELPEGTEMVMPGDNVNLTTELIAPIAMEEGQRFAIREGGRTVGAGVVTKIIE 1188
            MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAE YGG +FQAFDQIDNAPEERERGITIATSHVEYDSP RHYAHVDCPGHADYVKNMITGAAQMDGAILV SAADGPMPQTREHILLS+QVGVPYIVVFLNKAD+VDDEEL ELVEMEVRELLD Y FPGDDTPII+GSALKALEGD S+IGAPA+QKLVETLD+YIPEPERAIDQPFLMPIEDVFSISGRGTVVTGR+ RG++KV +EIEIVGI++T TTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRE+VERGQVL+ PGSITPHTKFEG VYVL+K+EGGRHTPFFKGYKPQFFFETTDVTGS +LPEG EMVMPGD+V +T ELIAPIAME+GQRFAIREGGRTVGAGVV  IIE
Sbjct:    1 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAEVYGGGEFQAFDQIDNAPEERERGITIATSHVEYDSPERHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKADMVDDEELTELVEMEVRELLDAYKFPGDDTPIIIGSALKALEGDDSEIGAPAIQKLVETLDKYIPEPERAIDQPFLMPIEDVFSISGRGTVVTGRIGRGVVKVGDEIEIVGIKDTTTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREEVERGQVLAIPGSITPHTKFEGSVYVLAKDEGGRHTPFFKGYKPQFFFETTDVTGSVQLPEGVEMVMPGDDVTMTVELIAPIAMEKGQRFAIREGGRTVGAGVVGNIIE 397          
BLAST of mRNA_P-littoralis_Contig1560.2.1 vs. uniprot
Match: A0A2D5I9N1_9GAMM (Elongation factor Tu n=24 Tax=cellular organisms TaxID=131567 RepID=A0A2D5I9N1_9GAMM)

HSP 1 Score: 712 bits (1838), Expect = 5.720e-258
Identity = 346/396 (87.37%), Postives = 378/396 (95.45%), Query Frame = 1
Query:    1 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAEAYGGDFQAFDQIDNAPEERERGITIATSHVEYDSPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPYIVVFLNKADLVDDEELLELVEMEVRELLDQYDFPGDDTPIIVGSALKALEGDTSDIGAPAVQKLVETLDEYIPEPERAIDQPFLMPIEDVFSISGRGTVVTGRVTRGIIKVSEEIEIVGIRETQTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVLSKPGSITPHTKFEGEVYVLSKEEGGRHTPFFKGYKPQFFFETTDVTGSCELPEGTEMVMPGDNVNLTTELIAPIAMEEGQRFAIREGGRTVGAGVVTKIIE 1188
            M+KEKFERTK HVNVGTIGHVDHGKTTLTAA+TKVCAEAYGG+ + F++IDNAPEERERGITIATSHV YDSP+RHYAHV CPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLS+QVGVPYIVVF+NKAD+VDDEELLELVEME+RELLDQYDFPGDDTPII+GSALKALEGD+SDIGAPAVQKLVETLDEYIPEPER +++PFLMPIEDVFSISGRGTVVTGRV RGI+KV EEIEIVGI++T+ TTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVL+ PG+ITPHTKFE EVY+LSK+EGGRHTPFFKGY+PQF+F TTDVTG+ ELPEG EMVMPGDN+ +  +LIAPIAM+EG RFAIREGGRTVGAGVV+KIIE
Sbjct:    1 MAKEKFERTKVHVNVGTIGHVDHGKTTLTAALTKVCAEAYGGELRNFEEIDNAPEERERGITIATSHVXYDSPNRHYAHVXCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDEELLELVEMEIRELLDQYDFPGDDTPIIIGSALKALEGDSSDIGAPAVQKLVETLDEYIPEPERDVEKPFLMPIEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGIKDTEKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVLAAPGTITPHTKFEAEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGNVELPEGVEMVMPGDNIKMVVDLIAPIAMDEGLRFAIREGGRTVGAGVVSKIIE 396          
BLAST of mRNA_P-littoralis_Contig1560.2.1 vs. uniprot
Match: A0A2A5CFU8_9GAMM (Elongation factor Tu n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2A5CFU8_9GAMM)

HSP 1 Score: 709 bits (1831), Expect = 6.920e-257
Identity = 344/396 (86.87%), Postives = 378/396 (95.45%), Query Frame = 1
Query:    1 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAEAYG-GDFQAFDQIDNAPEERERGITIATSHVEYDSPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPYIVVFLNKADLVDDEELLELVEMEVRELLDQYDFPGDDTPIIVGSALKALEGDTSDIGAPAVQKLVETLDEYIPEPERAIDQPFLMPIEDVFSISGRGTVVTGRVTRGIIKVSEEIEIVGIRETQTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVLSKPGSITPHTKFEGEVYVLSKEEGGRHTPFFKGYKPQFFFETTDVTGSCELPEGTEMVMPGDNVNLTTELIAPIAMEEGQRFAIREGGRTVGAGVVTKII 1185
            M+KEKFER K HVNVGTIGHVDHGKTTLTAA+T+VC+E +G G+  AFD IDNAPEE+ERGITI+TSHVEYDSP+RHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILL++QVGVPYIVVF+NKAD+VDD+ELLELVEME+RELLDQY+FPGDDTPII+GSALKALEGDTSDIG PAVQKLVETLDEYIP+P R I++PFLMPIEDVFSISGRGTVVTGR+ RG++K+ EEIEIVGIR+TQTTTCTGVEMFRKLLDEGRAGENVG+LLRGTKREDVERGQVL+KPGSITPHTKFE EVYVLSK+EGGRHTPFFKGY+PQF+FETTDVTG+CELPEG EMVMPGDNV +  EL+APIAMEEGQRFA+REGGRTVGAGVV KII
Sbjct:    1 MAKEKFERNKVHVNVGTIGHVDHGKTTLTAALTRVCSEVWGTGEAIAFDGIDNAPEEKERGITISTSHVEYDSPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLARQVGVPYIVVFMNKADMVDDDELLELVEMEIRELLDQYEFPGDDTPIIIGSALKALEGDTSDIGMPAVQKLVETLDEYIPDPVRDIEKPFLMPIEDVFSISGRGTVVTGRIARGLVKIGEEIEIVGIRDTQTTTCTGVEMFRKLLDEGRAGENVGILLRGTKREDVERGQVLAKPGSITPHTKFEAEVYVLSKDEGGRHTPFFKGYRPQFYFETTDVTGACELPEGVEMVMPGDNVKMVVELLAPIAMEEGQRFAVREGGRTVGAGVVAKII 396          
BLAST of mRNA_P-littoralis_Contig1560.2.1 vs. uniprot
Match: EFTU_ALCBS (Elongation factor Tu n=63 Tax=Proteobacteria TaxID=1224 RepID=EFTU_ALCBS)

HSP 1 Score: 709 bits (1830), Expect = 9.460e-257
Identity = 350/396 (88.38%), Postives = 370/396 (93.43%), Query Frame = 1
Query:    1 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAEAYGGDFQAFDQIDNAPEERERGITIATSHVEYDSPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPYIVVFLNKADLVDDEELLELVEMEVRELLDQYDFPGDDTPIIVGSALKALEGDTSDIGAPAVQKLVETLDEYIPEPERAIDQPFLMPIEDVFSISGRGTVVTGRVTRGIIKVSEEIEIVGIRETQTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVLSKPGSITPHTKFEGEVYVLSKEEGGRHTPFFKGYKPQFFFETTDVTGSCELPEGTEMVMPGDNVNLTTELIAPIAMEEGQRFAIREGGRTVGAGVVTKIIE 1188
            M+KEKFER KPHVNVGTIGHVDHGKTTLTAA+T+VCAE +GG+  AFD IDNAPEERERGITIATSHVEYDSP+RHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLS+QVGVPYIVVFLNKAD+VDDEELLELVEMEVRELL  YDFPGDDTPII GSALKALEGDTSDIG PAVQKLVETLDEYIPEPERA+DQPFLMPIEDVFSISGRGTVVTGRV RGI+KV EEIEIVGI +T  TTCTGVEMFRKLLDEGRAGENVGVLLRGTKR++VERGQVL+KPGSI PHTKF  EVYVLSK+EGGRHTPFF GY+PQF+F TTDVTG+C LPEGTEMVMPGDNV +  ELIAPIAME+G RFAIREGGRTVGAGVV KI E
Sbjct:    1 MAKEKFERNKPHVNVGTIGHVDHGKTTLTAALTRVCAEVWGGNAVAFDGIDNAPEERERGITIATSHVEYDSPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSRQVGVPYIVVFLNKADMVDDEELLELVEMEVRELLSDYDFPGDDTPIIKGSALKALEGDTSDIGMPAVQKLVETLDEYIPEPERAVDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGIHDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEVERGQVLAKPGSINPHTKFVAEVYVLSKDEGGRHTPFFNGYRPQFYFRTTDVTGACTLPEGTEMVMPGDNVQMDVELIAPIAMEDGLRFAIREGGRTVGAGVVAKITE 396          
BLAST of mRNA_P-littoralis_Contig1560.2.1 vs. uniprot
Match: A0A2K9LI75_9GAMM (Elongation factor Tu n=11 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2K9LI75_9GAMM)

HSP 1 Score: 702 bits (1812), Expect = 5.230e-254
Identity = 344/396 (86.87%), Postives = 371/396 (93.69%), Query Frame = 1
Query:    1 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAEAYGGDFQAFDQIDNAPEERERGITIATSHVEYDSPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPYIVVFLNKADLVDDEELLELVEMEVRELLDQYDFPGDDTPIIVGSALKALEGDTSDIGAPAVQKLVETLDEYIPEPERAIDQPFLMPIEDVFSISGRGTVVTGRVTRGIIKVSEEIEIVGIRETQTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVLSKPGSITPHTKFEGEVYVLSKEEGGRHTPFFKGYKPQFFFETTDVTGSCELPEGTEMVMPGDNVNLTTELIAPIAMEEGQRFAIREGGRTVGAGVVTKIIE 1188
            MSKEKFER+KPHVNVGTIGHVDHGKTTLTAA+T+VC+E +GG   AFD ID APEE+ RGITI+TSHVEY+SP+RHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLS+QVGVPYIVVFLNKAD+VDDEELLELVEMEVRELLDQYDFPGDDTPII GSALKALEGDTSDIG P+VQKLVETLDEYIPEP RAIDQPFLMPIEDVFSISGRGTVVTGRV RGIIKV EEIEIVG+++T  TTCTGVEMFRKLLDEGRAGENVGVLLRGTKR++VERGQVL KPG+I PHT+FE EVYVLSK+EGGRHTPFFKGY+PQF+F TTD+TG+CELPEG EMVMPGDN+ +   LIAPIAMEEG RFAIREGGRTVGAGVV KI+E
Sbjct:    1 MSKEKFERSKPHVNVGTIGHVDHGKTTLTAALTRVCSEIWGGAAVAFDGIDKAPEEKARGITISTSHVEYESPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSRQVGVPYIVVFLNKADMVDDEELLELVEMEVRELLDQYDFPGDDTPIIKGSALKALEGDTSDIGMPSVQKLVETLDEYIPEPVRAIDQPFLMPIEDVFSISGRGTVVTGRVERGIIKVGEEIEIVGVKDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEVERGQVLCKPGAIKPHTRFEAEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDITGACELPEGVEMVMPGDNIKMDVTLIAPIAMEEGLRFAIREGGRTVGAGVVAKIVE 396          
BLAST of mRNA_P-littoralis_Contig1560.2.1 vs. uniprot
Match: A0A6M5Z8L4_9GAMM (Elongation factor Tu n=7 Tax=Alcanivorax TaxID=59753 RepID=A0A6M5Z8L4_9GAMM)

HSP 1 Score: 701 bits (1810), Expect = 1.090e-253
Identity = 347/397 (87.41%), Postives = 373/397 (93.95%), Query Frame = 1
Query:    1 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAEAYG-GDFQAFDQIDNAPEERERGITIATSHVEYDSPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPYIVVFLNKADLVDDEELLELVEMEVRELLDQYDFPGDDTPIIVGSALKALEGDTSDIGAPAVQKLVETLDEYIPEPERAIDQPFLMPIEDVFSISGRGTVVTGRVTRGIIKVSEEIEIVGIRETQTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVLSKPGSITPHTKFEGEVYVLSKEEGGRHTPFFKGYKPQFFFETTDVTGSCELPEGTEMVMPGDNVNLTTELIAPIAMEEGQRFAIREGGRTVGAGVVTKIIE 1188
            M+KEKFER KPHVNVGTIGHVDHGKTTLTAA+T+VC E +G G   AFDQIDNAPEERERGITIATSHVEYDSP+RHYAHVDCPGHADYVKNMITGAAQMDGAILV SAADGPMPQTREHILLS+QVGVP+IVVFLNKAD+VDDEELLELVEMEVRELL+ YDFPGDDTPII GSALKALEGDTS+IG PAV KLVE LDEYIPEPERA+DQPFLMPIEDVFSISGRGTVVTGRV RGIIKV +E+EIVGI+ T  TTCTGVEMFRKLLDEGRAGENVGVLLRGTKR++VERGQVL+KPG+ITPHTKFEGEVYVLSK+EGGRHTPFF GY+PQF+F TTDVTG+C LPEGTEMVMPGDNV ++ ELIAPIAMEEG RFA+REGGRTVGAGVV+KIIE
Sbjct:    1 MAKEKFERNKPHVNVGTIGHVDHGKTTLTAALTRVCFETWGSGSASAFDQIDNAPEERERGITIATSHVEYDSPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPFIVVFLNKADMVDDEELLELVEMEVRELLNDYDFPGDDTPIIKGSALKALEGDTSEIGMPAVAKLVECLDEYIPEPERAVDQPFLMPIEDVFSISGRGTVVTGRVERGIIKVGDEMEIVGIKGTMKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEVERGQVLAKPGTITPHTKFEGEVYVLSKDEGGRHTPFFNGYRPQFYFRTTDVTGACTLPEGTEMVMPGDNVQMSVELIAPIAMEEGLRFAVREGGRTVGAGVVSKIIE 397          
BLAST of mRNA_P-littoralis_Contig1560.2.1 vs. uniprot
Match: A0A5Q2QC43_9GAMM (Elongation factor Tu n=1 Tax=Litoricola lipolytica TaxID=418701 RepID=A0A5Q2QC43_9GAMM)

HSP 1 Score: 701 bits (1808), Expect = 2.130e-253
Identity = 339/395 (85.82%), Postives = 371/395 (93.92%), Query Frame = 1
Query:    1 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAEAYGGDFQAFDQIDNAPEERERGITIATSHVEYDSPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPYIVVFLNKADLVDDEELLELVEMEVRELLDQYDFPGDDTPIIVGSALKALEGDTSDIGAPAVQKLVETLDEYIPEPERAIDQPFLMPIEDVFSISGRGTVVTGRVTRGIIKVSEEIEIVGIRETQTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVLSKPGSITPHTKFEGEVYVLSKEEGGRHTPFFKGYKPQFFFETTDVTGSCELPEGTEMVMPGDNVNLTTELIAPIAMEEGQRFAIREGGRTVGAGVVTKII 1185
            M+K  FER+KPHVNVGTIGHVDHGKTTLTAA+T+VCAE +GG+ QAFDQIDNAPEERERGITIATSHVEY+S  RHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLS+QVGVPYIVVF+NKAD+VDDEELLELVEME+RELLDQY+FPGDDTPII+GSALKALEGDTSDIG PAVQKLVETLD YIPEPERA+DQPFL+PIEDVFSISGRGTVVTGRV RGI+ V +E+EI+GI +T  TTCTGVEMFRKLLDEGRAGENVGVLLRGTKR+DV+RGQVL+KPG+I PHT+F  EVYVLSK+EGGRHTPFFKGY+PQF+F TTDVTG+CELPEG EMVMPGDN+ +T  LIAPIAMEEG RFAIREGGRTVGAGVV KI+
Sbjct:    1 MAKATFERSKPHVNVGTIGHVDHGKTTLTAALTRVCAEVFGGEAQAFDQIDNAPEERERGITIATSHVEYESTIRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDEELLELVEMEIRELLDQYEFPGDDTPIIIGSALKALEGDTSDIGMPAVQKLVETLDTYIPEPERAVDQPFLLPIEDVFSISGRGTVVTGRVERGIVNVGDELEIIGIADTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVQRGQVLAKPGTIKPHTEFTAEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGACELPEGVEMVMPGDNIQMTVTLIAPIAMEEGLRFAIREGGRTVGAGVVAKIL 395          
BLAST of mRNA_P-littoralis_Contig1560.2.1 vs. uniprot
Match: A0A2E4L0L4_9GAMM (Elongation factor Tu n=11 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E4L0L4_9GAMM)

HSP 1 Score: 699 bits (1805), Expect = 6.090e-253
Identity = 343/396 (86.62%), Postives = 373/396 (94.19%), Query Frame = 1
Query:    1 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAEAYGGDFQAFDQIDNAPEERERGITIATSHVEYDSPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPYIVVFLNKADLVDDEELLELVEMEVRELLDQYDFPGDDTPIIVGSALKALEGDTSDIGAPAVQKLVETLDEYIPEPERAIDQPFLMPIEDVFSISGRGTVVTGRVTRGIIKVSEEIEIVGIRETQTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVLSKPGSITPHTKFEGEVYVLSKEEGGRHTPFFKGYKPQFFFETTDVTGSCELPEGTEMVMPGDNVNLTTELIAPIAMEEGQRFAIREGGRTVGAGVVTKIIE 1188
            M+KEKFER+KPHVNVGTIGHVDHGKTTLTAA+T+V AE +GGD +AFDQIDNAPEER RGITIATSHVEY S +RHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLS+QVGVPYIVVFLNKAD+VDD ELLELVEMEVRELLDQY+FPGDDTPII+GSALKALEGD SDIG P+VQKL+ETLD+YIPEPERA+DQ FLMPIEDVFSISGRGTVVTGR+ RGII V +EIEIVGI++T  TTCTGVEMFRKLLDEGRAGENVGVLLRGTKR++VERGQVL+KP SITPHTKFE EVYVLSK+EGGRHTPFFKGY+PQF+F TTDVTG+CELP GTEMVMPGDNV L+ ELIAPIAMEEG RFAIR GGRTVGAGVV+KI++
Sbjct:    1 MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTRVGAEVFGGDARAFDQIDNAPEERARGITIATSHVEYQSHNRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSRQVGVPYIVVFLNKADMVDDPELLELVEMEVRELLDQYEFPGDDTPIIIGSALKALEGDASDIGMPSVQKLIETLDDYIPEPERAVDQAFLMPIEDVFSISGRGTVVTGRIERGIINVGDEIEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEVERGQVLAKPSSITPHTKFECEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGACELPSGTEMVMPGDNVKLSVELIAPIAMEEGLRFAIRXGGRTVGAGVVSKILD 396          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1560.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z8RL88_9GAMM2.380e-26691.12Elongation factor Tu n=16 Tax=Gammaproteobacteria ... [more]
A0A2E8WPN9_9GAMM1.260e-26189.65Elongation factor Tu n=1 Tax=Gammaproteobacteria b... [more]
A0A2E9EBT7_9GAMM1.070e-26089.92Elongation factor Tu n=6 Tax=unclassified Gammapro... [more]
A0A2D5I9N1_9GAMM5.720e-25887.37Elongation factor Tu n=24 Tax=cellular organisms T... [more]
A0A2A5CFU8_9GAMM6.920e-25786.87Elongation factor Tu n=2 Tax=Gammaproteobacteria T... [more]
EFTU_ALCBS9.460e-25788.38Elongation factor Tu n=63 Tax=Proteobacteria TaxID... [more]
A0A2K9LI75_9GAMM5.230e-25486.87Elongation factor Tu n=11 Tax=Gammaproteobacteria ... [more]
A0A6M5Z8L4_9GAMM1.090e-25387.41Elongation factor Tu n=7 Tax=Alcanivorax TaxID=597... [more]
A0A5Q2QC43_9GAMM2.130e-25385.82Elongation factor Tu n=1 Tax=Litoricola lipolytica... [more]
A0A2E4L0L4_9GAMM6.090e-25386.62Elongation factor Tu n=11 Tax=Gammaproteobacteria ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1560contigP-littoralis_Contig1560:946..2136 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2340.JV46_07390
Preferred nametuf
PFAMsGTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3
Model size1191
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K02358
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
Exons1
Evalue9.37e-259
EggNOG OGsCOG0050@1|root,COG0050@2|Bacteria,1MVC0@1224|Proteobacteria,1RMYX@1236|Gammaproteobacteria,1J5DE@118884|unclassified Gammaproteobacteria
DescriptionThis protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Cds size1191
COG categoryJ
BRITEko00000,ko03012,ko03029,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789747.1983776-CDS-P-littoralis_Contig1560:945..21361680789747.1983776-CDS-P-littoralis_Contig1560:945..2136Pylaiella littoralis U1_48CDSP-littoralis_Contig1560 946..2136 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1560.2.1prot_P-littoralis_Contig1560.2.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1560 946..2136 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1560.2.1

>prot_P-littoralis_Contig1560.2.1 ID=prot_P-littoralis_Contig1560.2.1|Name=mRNA_P-littoralis_Contig1560.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=397bp
MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITKVCAEAYGGDFQAFDQI
DNAPEERERGITIATSHVEYDSPSRHYAHVDCPGHADYVKNMITGAAQMD
GAILVCSAADGPMPQTREHILLSKQVGVPYIVVFLNKADLVDDEELLELV
EMEVRELLDQYDFPGDDTPIIVGSALKALEGDTSDIGAPAVQKLVETLDE
YIPEPERAIDQPFLMPIEDVFSISGRGTVVTGRVTRGIIKVSEEIEIVGI
RETQTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKREDVERGQVLSKPGS
ITPHTKFEGEVYVLSKEEGGRHTPFFKGYKPQFFFETTDVTGSCELPEGT
EMVMPGDNVNLTTELIAPIAMEEGQRFAIREGGRTVGAGVVTKIIE*
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mRNA from alignment at P-littoralis_Contig1560:946..2136+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1560.2.1 ID=mRNA_P-littoralis_Contig1560.2.1|Name=mRNA_P-littoralis_Contig1560.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1191bp|location=Sequence derived from alignment at P-littoralis_Contig1560:946..2136+ (Pylaiella littoralis U1_48)
ATGTCAAAGGAAAAATTCGAGCGGACCAAACCGCACGTCAATGTAGGTAC GATTGGCCACGTAGACCACGGTAAGACGACGCTGACAGCGGCGATTACAA AAGTGTGTGCGGAAGCCTATGGTGGCGACTTCCAGGCGTTTGATCAGATT GACAACGCGCCGGAAGAACGCGAGCGCGGTATTACGATTGCGACCTCTCA CGTTGAATACGATTCACCGAGTCGTCACTACGCGCACGTCGACTGTCCGG GACACGCTGACTATGTGAAGAACATGATTACCGGTGCTGCCCAGATGGAC GGAGCGATTCTGGTTTGTTCAGCGGCTGACGGCCCCATGCCTCAAACTCG TGAGCACATTCTGCTGTCCAAGCAGGTGGGTGTACCTTACATCGTTGTGT TCCTGAACAAGGCTGACCTGGTTGACGATGAAGAGCTGCTGGAACTGGTT GAAATGGAAGTGCGTGAACTGCTTGACCAGTACGACTTCCCGGGTGATGA CACCCCGATCATTGTGGGTTCTGCCCTGAAGGCGCTGGAAGGCGACACTT CTGACATCGGTGCACCTGCTGTACAGAAGCTGGTAGAGACACTGGACGAG TACATTCCTGAGCCAGAGCGTGCGATTGATCAGCCGTTCCTGATGCCGAT CGAAGACGTATTCTCGATCTCAGGTCGAGGTACGGTTGTAACCGGTCGAG TGACTCGCGGCATCATCAAGGTGAGCGAAGAGATTGAGATTGTTGGTATT CGTGAAACTCAGACGACCACTTGTACTGGTGTTGAGATGTTCCGCAAGCT GCTGGACGAAGGCCGTGCTGGTGAGAACGTGGGTGTTCTGCTGCGTGGTA CGAAGCGTGAAGACGTCGAGCGTGGCCAGGTGCTGTCAAAGCCGGGTTCG ATCACGCCGCACACGAAGTTCGAAGGTGAGGTATACGTGCTGAGCAAAGA AGAAGGTGGTCGTCATACGCCGTTCTTCAAGGGTTACAAGCCTCAGTTCT TCTTTGAGACGACGGACGTGACAGGTAGCTGTGAGCTGCCGGAAGGCACA GAGATGGTGATGCCGGGTGACAACGTGAACCTGACCACTGAGCTGATTGC GCCGATTGCAATGGAAGAAGGTCAGCGCTTCGCTATCCGTGAGGGTGGCC GCACCGTAGGTGCCGGTGTTGTGACCAAGATTATCGAGTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1560:946..2136+

>mRNA_P-littoralis_Contig1560.2.1 ID=mRNA_P-littoralis_Contig1560.2.1|Name=mRNA_P-littoralis_Contig1560.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1191bp|location=Sequence derived from alignment at P-littoralis_Contig1560:946..2136+ (Pylaiella littoralis U1_48)
ATGTCAAAGGAAAAATTCGAGCGGACCAAACCGCACGTCAATGTAGGTAC
GATTGGCCACGTAGACCACGGTAAGACGACGCTGACAGCGGCGATTACAA
AAGTGTGTGCGGAAGCCTATGGTGGCGACTTCCAGGCGTTTGATCAGATT
GACAACGCGCCGGAAGAACGCGAGCGCGGTATTACGATTGCGACCTCTCA
CGTTGAATACGATTCACCGAGTCGTCACTACGCGCACGTCGACTGTCCGG
GACACGCTGACTATGTGAAGAACATGATTACCGGTGCTGCCCAGATGGAC
GGAGCGATTCTGGTTTGTTCAGCGGCTGACGGCCCCATGCCTCAAACTCG
TGAGCACATTCTGCTGTCCAAGCAGGTGGGTGTACCTTACATCGTTGTGT
TCCTGAACAAGGCTGACCTGGTTGACGATGAAGAGCTGCTGGAACTGGTT
GAAATGGAAGTGCGTGAACTGCTTGACCAGTACGACTTCCCGGGTGATGA
CACCCCGATCATTGTGGGTTCTGCCCTGAAGGCGCTGGAAGGCGACACTT
CTGACATCGGTGCACCTGCTGTACAGAAGCTGGTAGAGACACTGGACGAG
TACATTCCTGAGCCAGAGCGTGCGATTGATCAGCCGTTCCTGATGCCGAT
CGAAGACGTATTCTCGATCTCAGGTCGAGGTACGGTTGTAACCGGTCGAG
TGACTCGCGGCATCATCAAGGTGAGCGAAGAGATTGAGATTGTTGGTATT
CGTGAAACTCAGACGACCACTTGTACTGGTGTTGAGATGTTCCGCAAGCT
GCTGGACGAAGGCCGTGCTGGTGAGAACGTGGGTGTTCTGCTGCGTGGTA
CGAAGCGTGAAGACGTCGAGCGTGGCCAGGTGCTGTCAAAGCCGGGTTCG
ATCACGCCGCACACGAAGTTCGAAGGTGAGGTATACGTGCTGAGCAAAGA
AGAAGGTGGTCGTCATACGCCGTTCTTCAAGGGTTACAAGCCTCAGTTCT
TCTTTGAGACGACGGACGTGACAGGTAGCTGTGAGCTGCCGGAAGGCACA
GAGATGGTGATGCCGGGTGACAACGTGAACCTGACCACTGAGCTGATTGC
GCCGATTGCAATGGAAGAAGGTCAGCGCTTCGCTATCCGTGAGGGTGGCC
GCACCGTAGGTGCCGGTGTTGTGACCAAGATTATCGAGTGA
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