prot_P-littoralis_Contig156.142.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig156.142.1
Unique Nameprot_P-littoralis_Contig156.142.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length124
Homology
BLAST of mRNA_P-littoralis_Contig156.142.1 vs. uniprot
Match: D8LP47_ECTSI (EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP47_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 1.390e-52
Identity = 93/120 (77.50%), Postives = 103/120 (85.83%), Query Frame = 0
Query:    5 ETKCLILGIEARLLKYVINVKTYVCLTNDSSLSRRDMKAIYASRWRVEESFKRLKSNLKLEQAHARTPDLYIQEVEARVLLDTITLRLQRKAGERSYIYTHDTCVTHVPRNVMFVSNPTR 124
            E  CLILGIEARLLKY I+ KTYVCLTND SLSRRD+K +YASRWRVEESFKRLKSNL+LE+AHARTPDLYIQEVEARVLLDTITLR+Q    E SY+YT DT VT++ RNV  VS P+R
Sbjct:  212 EAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVKRVSGPSR 331          
BLAST of mRNA_P-littoralis_Contig156.142.1 vs. uniprot
Match: D8LP60_ECTSI (EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP60_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 6.960e-51
Identity = 91/120 (75.83%), Postives = 100/120 (83.33%), Query Frame = 0
Query:    5 ETKCLILGIEARLLKYVINVKTYVCLTNDSSLSRRDMKAIYASRWRVEESFKRLKSNLKLEQAHARTPDLYIQEVEARVLLDTITLRLQRKAGERSYIYTHDTCVTHVPRNVMFVSNPTR 124
            E  CLILG+ ARLLKY I+ KTYVCLTND SLSRRD+K +YASRWRVEES KRLKSNLKLE+AHA+TP LYIQEVEARVLLDTITLRLQ+   E SYIYT DT VTH+  NV  VSNP +
Sbjct:  212 EATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESLKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSIKEPSYIYTLDTYVTHILNNVKRVSNPVK 331          
BLAST of mRNA_P-littoralis_Contig156.142.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.990e-50
Identity = 94/120 (78.33%), Postives = 103/120 (85.83%), Query Frame = 0
Query:    5 ETKCLILGIEARLLKYVINVKTYVCLTNDSSLSRRDMKAIYASRWRVEESFKRLKSNLKLEQAHARTPDLYIQEVEARVLLDTITLRLQRKAGERSYIYTHDTCVTHVPRNVMFVSNPTR 124
            E  CLILGIEARLLKY I+ KTYVCLTND SLSRRD+K +YASRWRVEESFKRLKSNLKLE+AHA+TP LYIQEVEARVLLDTITLR+Q    E SY+YT DT VTH+ RNV  VS+PTR
Sbjct:  227 EAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVKRVSSPTR 346          
BLAST of mRNA_P-littoralis_Contig156.142.1 vs. uniprot
Match: Q8QNB6_ESV1K (EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB6_ESV1K)

HSP 1 Score: 169 bits (427), Expect = 8.870e-49
Identity = 88/120 (73.33%), Postives = 101/120 (84.17%), Query Frame = 0
Query:    5 ETKCLILGIEARLLKYVINVKTYVCLTNDSSLSRRDMKAIYASRWRVEESFKRLKSNLKLEQAHARTPDLYIQEVEARVLLDTITLRLQRKAGERSYIYTHDTCVTHVPRNVMFVSNPTR 124
            E  CLILG++ARLLKY I+ KTYVCLT D SLSR  +K +YASRWRVEESFKRLKSNL+LE+AHARTPDLYIQEVEARVLLDTITLR+Q    E SY+YT DT VT++ RNV  VS+P+R
Sbjct:  212 EATCLILGVKARLLKYFIDGKTYVCLTTDPSLSRLKIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVKRVSSPSR 331          
BLAST of mRNA_P-littoralis_Contig156.142.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 5.390e-45
Identity = 87/116 (75.00%), Postives = 95/116 (81.90%), Query Frame = 0
Query:    8 CLILGIEARLLKYVINVKTYVCLTNDSSLSRRDMKAIYASRWRVEESFKRLKSNLKLEQAHARTPDLYIQEVEARVLLDTITLRLQRKAGERSYIYTHDTCVTHVPRNVMFVSNPT 123
            CLILG+  RLLKY I  KTYVCLTND SLSRRD+K +YA RWRVEESFKRLKSNLKLE+AHA+TP LYIQEVEARVLLDTITLR+Q    E SY+YT DT VTH+ RNV  VS  T
Sbjct:  199 CLILGVRVRLLKYFIKGKTYVCLTNDPSLSRRDIKTMYAWRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVKRVSGHT 314          
BLAST of mRNA_P-littoralis_Contig156.142.1 vs. uniprot
Match: A0A6H5K0K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K9_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.730e-39
Identity = 73/90 (81.11%), Postives = 83/90 (92.22%), Query Frame = 0
Query:    5 ETKCLILGIEARLLKYVINVKTYVCLTNDSSLSRRDMKAIYASRWRVEESFKRLKSNLKLEQAHARTPDLYIQEVEARVLLDTITLRLQR 94
            ET CLILG+++RL+KY IN KTYVCLTND +LSRRD+KAIYASRWR E+S  RLKSN++LE+AHARTPDLYIQEVEARVLLDTITLRLQR
Sbjct:  142 ETTCLILGVQSRLVKYSINGKTYVCLTNDPTLSRRDIKAIYASRWRGEQSL-RLKSNVRLEKAHARTPDLYIQEVEARVLLDTITLRLQR 230          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig156.142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LP47_ECTSI1.390e-5277.50EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LP60_ECTSI6.960e-5175.83EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus ... [more]
A0A6H5K772_9PHAE1.990e-5078.33DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
Q8QNB6_ESV1K8.870e-4973.33EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A6H5JA56_9PHAE5.390e-4575.00DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K0K9_9PHAE1.730e-3981.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002559Transposase, IS4-likePFAMPF01609DDE_Tnp_1coord: 25..73
e-value: 8.5E-9
score: 35.4
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 16..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig156contigP-littoralis_Contig156:418598..418969 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig156.142.1mRNA_P-littoralis_Contig156.142.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig156 418014..418969 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig156.142.1 ID=prot_P-littoralis_Contig156.142.1|Name=mRNA_P-littoralis_Contig156.142.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=124bp
MVFLETKCLILGIEARLLKYVINVKTYVCLTNDSSLSRRDMKAIYASRWR
VEESFKRLKSNLKLEQAHARTPDLYIQEVEARVLLDTITLRLQRKAGERS
YIYTHDTCVTHVPRNVMFVSNPTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002559Transposase_11
IPR012337RNaseH-like_sf