prot_P-littoralis_Contig156.140.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig156.140.1
Unique Nameprot_P-littoralis_Contig156.140.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length152
Homology
BLAST of mRNA_P-littoralis_Contig156.140.1 vs. uniprot
Match: Q8QNN8_ESV1K (EsV-1-23 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNN8_ESV1K)

HSP 1 Score: 184 bits (468), Expect = 1.740e-52
Identity = 91/148 (61.49%), Postives = 113/148 (76.35%), Query Frame = 0
Query:    1 MNPGRSTIEQRRSAAVRNLRGHAEYEQRRQQCEVAKFMKSVADPVKNKKGKFSKTKGLLVAHGMGSGKTVTSLWVAKQYLADGRVNFVNIVAPNVAVPEFRDSFEKAGATPNQAGRIRVLTHDEFADNKRLCNFGNSLAIIDEAHLFT 148
            +NP RST++ R   A    +G  +  Q++ QC V +FMK VADP +NK+ K++ TKGLL+AHGMGSGKT+TSLWVAK+Y+A  RV FVNI+APNVAV EF DSFE+AG TP  AG+IRVLTHDEFA NK+   F  SL I+DEAH+FT
Sbjct:  108 LNPTRSTVDARVDTARTRAQGRNQETQKKNQCNVIEFMKRVADPTRNKEEKYANTKGLLIAHGMGSGKTLTSLWVAKEYIAKNRVKFVNILAPNVAVGEFIDSFERAGITPQTAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFT 255          
BLAST of mRNA_P-littoralis_Contig156.140.1 vs. uniprot
Match: D8LP58_ECTSI (Helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP58_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 6.340e-52
Identity = 91/148 (61.49%), Postives = 112/148 (75.68%), Query Frame = 0
Query:    1 MNPGRSTIEQRRSAAVRNLRGHAEYEQRRQQCEVAKFMKSVADPVKNKKGKFSKTKGLLVAHGMGSGKTVTSLWVAKQYLADGRVNFVNIVAPNVAVPEFRDSFEKAGATPNQAGRIRVLTHDEFADNKRLCNFGNSLAIIDEAHLFT 148
            +NP RST++ R   A     G  +  ++R QC V +FMK VADP KNK+ +++ TKGLL+AHGMGSGKT+TSLWVAK+Y+A  RV FVNI+APNVAV EF DSFE+AG TP  AG+IRVLTHDEFA NK+   F  SL I+DEAH+FT
Sbjct:  108 LNPTRSTVDDRVDTARTRALGRKQETEKRNQCNVIEFMKRVADPTKNKEKQYANTKGLLIAHGMGSGKTLTSLWVAKEYIAKNRVKFVNILAPNVAVGEFIDSFERAGITPQIAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFT 255          
BLAST of mRNA_P-littoralis_Contig156.140.1 vs. uniprot
Match: A0A6H5JDR8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR8_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 4.970e-22
Identity = 60/148 (40.54%), Postives = 82/148 (55.41%), Query Frame = 0
Query:    1 MNPGRSTIEQRRSAAVRNLRGHAEYEQRRQQCEVAKFMKSVADPVKNKKGKFSKTKGLLVAHGMGSGKTVTSLWVAKQYLADGRVNFVNIVAPNVAVPEFRDSFEKAGATPNQAGRIRVLTHDEFADNKRLCNFGNSLAIIDEAHLFT 148
            ++P RST + R  +A    RG  +   ++++C V  FMK VAD  KN++  ++ TK                           +V FVNI+A NVAV E  +SFE+AG TP  AG+IRVLTHD FA N++   F  SL I+DEAH+FT
Sbjct:  475 LDPTRSTFDDRVESANTRARGRKQETDKKKKCNVIDFMKRVADLTKNEEKIYANTK---------------------------KVKFVNILASNVAVGELINSFERAGITPQIAGKIRVLTHDGFALNRKARKFSRSLVIVDEAHMFT 595          
BLAST of mRNA_P-littoralis_Contig156.140.1 vs. uniprot
Match: A0A5J6VJP7_9VIRU (SNF2 family N-terminal domain protein n=1 Tax=Megaviridae environmental sample TaxID=1737588 RepID=A0A5J6VJP7_9VIRU)

HSP 1 Score: 53.5 bits (127), Expect = 2.040e-5
Identity = 30/95 (31.58%), Postives = 53/95 (55.79%), Query Frame = 0
Query:   52 FSKTKGLLVAHGMGSGKTVTSLWVAKQYLADGRVNFVNIVAPNVAVPEFRDSFEKAGATPNQAGRIRVLTHDEFADNKRLCNFGNSLAIIDEAHL 146
            F KT+GL++ HGMGSGKT+TS+  A+  + +     +++  P   V  +     KA A  +   +  +++HD++    +   + N L I+DEAH+
Sbjct:   15 FRKTRGLILNHGMGSGKTLTSIACAEDAMKNKPNLQIHVAVPAKLVSNYEKELAKANANTS---KYIIMSHDKYIKWIQP-PYSNILLIVDEAHI 105          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig156.140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Q8QNN8_ESV1K1.740e-5261.49EsV-1-23 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D8LP58_ECTSI6.340e-5261.49Helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5JDR8_9PHAE4.970e-2240.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5J6VJP7_9VIRU2.040e-531.58SNF2 family N-terminal domain protein n=1 Tax=Mega... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006935Helicase/UvrB, N-terminalPFAMPF04851ResIIIcoord: 43..112
e-value: 7.8E-5
score: 22.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 20..151
e-value: 2.1E-8
score: 35.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 29..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig156contigP-littoralis_Contig156:401859..402314 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig156.140.1mRNA_P-littoralis_Contig156.140.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig156 400819..402479 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig156.140.1 ID=prot_P-littoralis_Contig156.140.1|Name=mRNA_P-littoralis_Contig156.140.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=152bp
MNPGRSTIEQRRSAAVRNLRGHAEYEQRRQQCEVAKFMKSVADPVKNKKG
KFSKTKGLLVAHGMGSGKTVTSLWVAKQYLADGRVNFVNIVAPNVAVPEF
RDSFEKAGATPNQAGRIRVLTHDEFADNKRLCNFGNSLAIIDEAHLFTEG
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006935Helicase/UvrB_N
IPR027417P-loop_NTPase