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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 518 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 261 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789742.6277447-UTR-P-littoralis_Contig156:102932..103187 | 1680789742.6277447-UTR-P-littoralis_Contig156:102932..103187 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig156 102933..103187 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789742.637422-CDS-P-littoralis_Contig156:103187..103364 | 1680789742.637422-CDS-P-littoralis_Contig156:103187..103364 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig156 103188..103364 + |
| 1680789742.6498523-CDS-P-littoralis_Contig156:107987..108071 | 1680789742.6498523-CDS-P-littoralis_Contig156:107987..108071 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig156 107988..108071 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig156.21.1 >prot_P-littoralis_Contig156.21.1 ID=prot_P-littoralis_Contig156.21.1|Name=mRNA_P-littoralis_Contig156.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=87bp
MSMKTAIFVDISRHSLGLATRRREDLLSACLVVVCAFRPTNCNSPHRVFI
GNVRHTYQVLLLILTLAHYRRSLARGHKPGTYRARRK back to topmRNA from alignment at P-littoralis_Contig156:102933..108071+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig156.21.1 ID=mRNA_P-littoralis_Contig156.21.1|Name=mRNA_P-littoralis_Contig156.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5139bp|location=Sequence derived from alignment at P-littoralis_Contig156:102933..108071+ (Pylaiella littoralis U1_48)
GCAGATAGAGTGGACTCCGCGAGTAATTGTTTTGCGTAGGCCAGGGCGTT
GCTGTCGAAGGTCGTGTACAAAGTGACGTGGGTGACCTTTGTTTATACTC
TCGTCGATAGAGAAGTTTTCTGTTTACTGGTTTGCGTATGCTCTTCTTGT
GCCTCGCTTTGTGCTTCGGCGCTTTATGGTGAACTTTGATTTGTCGTGTT
TTAGCAGCCAGGAGCAAACGTTTGCCAGGTTATTTGGTTGATCAGGAGTA
CCAGGATGAGTATGAAGACCGCTATCTTTGTTGATATCAGTCGGCACTCA
CTGGGCCTGGCAACCCGCCGCCGCGAAGACTTGCTCTCAGCGTGCCTCGT
CGTAGTATGCGCCTTTCGCCCAACCAACTGTAATTCTCCGCATCGTGTGT
TCATCGGGAATGTGCGTCATACCTACCAGGTGTGTGTGCCTGTGGTGTTG
ATCAGTGGCATGTTCTCAATTGATTTGAGGTTACATTCCGTCTGTAGGGA
TGAGAGGCGAGTGTTGTCACCAGGTGCGCCGCGTAGTGCATTGCCTATGT
GGGGGTGATAGTTATGTGTTGTCACTAGATGCGCCGCGTAGTACATTGCC
TACATGGGGGTGAGGGTGGTGTGTCGTCAATTCATGAAAATTAATCATCC
GTTGCGGATGCGAGGATGATCAAAATGTTTTCTCAATCCAGGTCGTTCGT
TGCGCCTGTCCGATGTGCGTTTGAATGGTGGCAACTGCTGGCCGACCGAC
TGCAATGCACTTTGTCGAGGAGTTGCGCGTGAAGCACCCTCCCGACCTTA
GAACTGGGTAAGTCATGGTCAAATGCCCCCGGTGTGAGGAGGTCGCGAAA
CAAGCTGCACCGTCCCCCTCTTCACCATCGTGTGCAAGCCCACGACCTCT
ACAACCTCAACCGGTGCCAGAGGTTGGTGACATACATCGCACAATGCTGT
TCGTCAATCTCGCGACGGATATTGTGGTGGCAACCTTGCTCAAGGCTTGC
AATCAAATCAAATAATATAATGTAGCGCAGTTTTAAAATTTTGACTTCTG
CAACCCCCCCCCCCCTTAACTTTGACTTAGGTTGTGGGGGGGGGGAATTG
TCCACCTGCGTAAACACCGGTCGCCCCGGTGGTTCAGTTGGTAACTCACG
TAAGCTTCTGACGTTCACGCGTGAGTTCGAATCCCAGTGCAGTGCAGTAA
CACGATCTGGGTTTTCTTCTCACAATGCGCGTGAAAGTGGAAAGCGATTA
ATTCGTGAGTAAACGAAGTTCGATCGTACCATCGACGAGGGAAAGGGATT
GCTGTCCCCTTTCTCGCGTTAAAAGCTCAACCAAACAAGGCGAGTACCGC
AGAGGGAAGTGAGAAAAAAACAAAAAATAAAAAAAATAAAAACTCCTGTC
TGTGTTGACTTCCCCATGTGTGACCCCAGTTGGAGCGTCGACCAGCTACC
CGAAAGGTGAAGAGTGGCGTCCAATTAAAGGGACGACAACGCACACACAC
ACACTATTTATTGCATCGGTCGCCCCGGTGGTTCAGTTGGTATCCCGCGT
TATACCTTTTCTTCTGACATTCACGCGTGAGTTCGAATCCCAGTGCAGTA
ACACGATCTGGGTTTTCTTCTCACGATGCGCGTGAAAGTGGAAAGCGATT
AATTCGTGAGTAGTAGTAGTAGACAAAAAATCGATCGTACCGTCGAGGAG
GGAAAGGGATTGCTGTCCCCTTTCTCGCGATAAAAACTCAAACAAAAACC
GCAGAGGAAAGTACTGTAGTGGAGAACGAAAAAAAAAAAACTCTTTCTTG
TGTTGACTTCCCCCTGTGTGACAACGCACATACCCTATAAGATCGAGTAC
CACGGTACATAGCGTTACCACGGTGGTAGCTGATTTTACCGTATACGAAG
TATTATTTACTATTTACCGTACCCACTCACTGCTGTTCGATACCGTGAAA
GGTAAAGTACTGCGGCGGTATCATACTTGTATACGAAGTAAAATATGCTT
CCAAAACAACAATCTTGGACTCGATTAATAAGATTTCGCTCAGGTTTCAA
GAGCTGCCTCGGACTTGAAATCTTACCTGAATTTTCCCAACAATTATAGT
CTAATACAAGGGCTCCGGCCGGGGGGCCTGTCGGCCCCCTCGGCCTCCGG
TGTGTGTGCGGAATGATAACATACGTGTATGAAATGTGAGTCGGCATACC
AAGGGTGAGACTGGTGAAGACACCGTGAAGATCAGACGCGTTCACTATCC
GGTGACGCTCTGTAAATGAATGTTGGTGGGATGGTGGAGGTGAAGAAGAA
GCGCCCGTTTGTACGCAGTTGTTGGAAGGAAACCTGAATTGAAAGTGAAC
ATACCTAAGACAACACTACAGCGAAGCGAAGTCAGGGCAAACAGGAAACC
AACGCCTCACATCCAAATTCTAAGGAGTGAAAACGAGATGATTATGCTGA
TGAGCATCCACAGCGTAAGGTGCAACGCTAAAGGTACTGAACACAACAGG
AAACCTACGCCGAAAAAAGTGGAAGCGTAACGAAAAGATCATGACGACCT
GAACGTGTACACTGAAGGCAACAGAAGACGCCAAGGAAACGAAAAGAGTA
TGCTGATGAGCGTCGACAGCGAAAGATGCAACGCTAAAGGTACTGAACAC
AACAGGAAACCAACGCCGAAAGAAGTGGAAGCGTAACGAAAAGATCATGG
AGACCTGAACATGTACACTGAAGGAACAGAAACCAAAGGCACCGAAGACA
ACAGGAAACCAACGCTGAAAAGCGGAAACGCTCCAACGAAATGTTACGTA
GTAGTAACGAGGCAAAGGTACGTCTAAGGCAGAACTACTGTAAGAGGTAA
CCGGAAGTTCCCAGCGTACGGCATTGATACCGACGAATAAAGAATCATCG
CTCAAAATGCGATAGGTGTGTTGACCAAAATATAGTCCACGTAGACGTCG
TGCGGCACGCCTGGTGGTTGTGTCTATGGGCAAGCAGGTAGTTCCAGGTA
CAGAACGACACAGCCCCGAAGTTGCCCGACCCTTTCAGCACACCGCGAGA
GCGTCATCAGGGTGTCGCGAGGAGTCGACTCCGCGCTTGTGGAGCTGTAA
AACAGCATGACGGTCATGATGTCGGAGATCTGCTGGGTCGTCCTTCTCGT
CTGTGGGGATACCAATGGAAGGGTAGCCCCCGATGTCACACAGGCACAGC
TGGTAGCCGTGCGGGTGATCCTTGCTGGCGAGCAGCATGGACAGCGTGAC
CTTGAAATGTGCGAGGCATGACAAAAAAAAAAGCGAAGTGCTGAAAATGT
TGAAAGAGGGAGGAACAGATGCAAAAATCACATCATCCGTGAGGGTCATG
AAAGAGGCACGGTCGGTCACAGAAAGCGCATGCAATCGACGGACACCTCA
TTGTTACCGGCAACACACGATCTGCAGCACAACAAACGAGCAACAGATTC
ATGGGAAAGGTGCTGGTGGCGGTACAGCGTGACCTTGAAAAATgtgcgaG
GCATGAGAAAAAAGCAATAGATTCATGGGAAATGTGCTGGTGGCGGTACA
GCGCGACCTTGAAAAATTGTGCAAGGCATGAAAAAAAAGTGTGCTCACAA
TATTAGTCTAAGGCCCTTTTTAATCAGGAGGCCTGAATTGGCCGAACGGC
TTTTTTTTTCACCGATCGGCGAAATGGTCGACAATATGAAGGCTTTCTTC
CCCCGAAAGGTGAAATTGAGCGACAGCAAAAAAACGGCGGATATTCGATT
TCGCCGAAAGGTGAATTTTTCCAACGATTTCCAGAAACGTATATAACACA
CACCAAACTCGCCCTACAGCAGCAACAGCAGTGCAGATAGCAAAATAAAG
AGCAGGCTACCCGAGACAATCACTCTGGCGAGCAAACCCACCCCTGATGT
TCACATTCCGGCAGGCGCGGTGAGAGGTTGGTGAACAAAATTAGAGCAGA
AGCGACGAGAAGGAACCGGAATCCTTGATTTCGCCGCTTGTCTGCCTCTT
TTTCTTGCTCCGCCAACACACACCCTGCTGGCAACCCCATTGAAGCCAGC
AATCAAGCTGCGACGACCGCGTAGCACCAGCGTGGTCGAGGGCCACTATC
ATGTAGACGCCCGTTTCAAAAGAATCAGGAGTTCGGAGGCCTTGTAGCTC
TGATGCTATCTGATGCCGTCAAGTGAAGCTTGTGACTGCAACCAAAAAAC
ACCACCAGCGCGATTTGGAAGCGTCTAGCAGCACACACCATCTTCTTGCG
TCCCTTGGTGAGCCTCACACGAGCTACCACAACCACGCAGCGGCAACAAT
ACCGAGGGTCAATATCATGTAGACCTACGTTCCGAAAGAATGAGGACTTG
GGAGGTCGTCGGTCTCTGTTGCTGTCTGCTGTTGTGTAGTGATCTTTGTC
TGATTTTATAGCAGAAAAGCACCATGACCTCTCCGATTAGAACGGAGCAA
ATTTCTCTCCACCTTTCGGGGAAATGATTTCGCCGTTCGGCGAAATCAGG
CCTCCTGATTAAAAAGGGCCTAACACACATGCGGTAAAGCACGTGCAATC
CACGGACACATTGTTACCGGCAACACACGGTCTGCAGCACTGAAACAAAC
GAGCAACATATTCATGGGAAAGGTGCTGGTGGCGGTGGTGCTCGGGGAGA
CTGCAAAATAAAACACAGCAGCACACACAGGACACGGATGCAAACACCAC
AAAATTCGTGAGGGTGATCGAAGAGCACAATCACGATAATGAGGGCAAAA
GGTAATCACAGATGACGTTTCCAACACAACCGTAGTCATACCTTGCACAT
GTCCTTGTCGCTCCACACGTTTTGGTCGCAGGTAACGTACTCTTTTTTAT
CCTTCTTACGAAGGCAGACCTTCAGACGCCCGTCAGGGCAGTCCTTGAAA
TCCAGACAGGGCCAGTCTGAGTTGCCAGCCGAGAAGAGAGCCCTAGACTT
GGCTGCCGTGTTGCTACCTTGTTGCTTGCGCTTCAGTGGTGAACGCTTTG
ACAACGCGCTCATTCTGCTTATAAGGTGTTTGGTGCTCTATGTAATGGGT
GTTGTTTGTTGTTGATTCTCACATTAGCTCACTACCGCCGCAGTCTAGCC
CGTGGTCACAAACCAGGTACATATCGTGCTAGGAGGAAA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig156:102933..108071+ >mRNA_P-littoralis_Contig156.21.1 ID=mRNA_P-littoralis_Contig156.21.1|Name=mRNA_P-littoralis_Contig156.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=261bp|location=Sequence derived from alignment at P-littoralis_Contig156:102933..108071+ (Pylaiella littoralis U1_48)
ATGAGTATGAAGACCGCTATCTTTGTTGATATCAGTCGGCACTCACTGGG
CCTGGCAACCCGCCGCCGCGAAGACTTGCTCTCAGCGTGCCTCGTCGTAG
TATGCGCCTTTCGCCCAACCAACTGTAATTCTCCGCATCGTGTGTTCATC
GGGAATGTGCGTCATACCTACCAGGTGTTGTTGTTGATTCTCACATTAGC
TCACTACCGCCGCAGTCTAGCCCGTGGTCACAAACCAGGTACATATCGTG
CTAGGAGGAAA back to top
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