mRNA_P-littoralis_Contig1556.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1556.3.1
Unique NamemRNA_P-littoralis_Contig1556.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1556.3.1 vs. uniprot
Match: UPI000A2A66BF (protein ALP1-like isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A66BF)

HSP 1 Score: 190 bits (482), Expect = 9.700e-55
Identity = 111/251 (44.22%), Postives = 149/251 (59.36%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDCLEFFAPRFPQICKKIEAKG---DHFNGVVLGVL--VKQKARVTHIRASCVRCVAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 750
            YP RW DLQ  FGR  ++LS IFNEV+D  Y++H H + D L+          + I AKG   D   G + G    + +  R   I  S  + V H L +QSV   +G++  ++GP  GRRHD+ +L  SGL  +L  LQ  N   Y +YGD AY +  ++   FRG  LT  Q+ +N+ +SK+RVAVEW FGK+ Q F F+DF KN+K+ LQ V KYY +A LLTN HTC+  S TG YF++  PSLE Y
Sbjct:  146 YPNRWCDLQSLFGRSESELSLIFNEVIDDIYESH-HHLIDALDLVWLDPQTFSQAIHAKGAPLDQCWGFIDGTPRPIARPIRSQRIMYSGHKRV-HCLKFQSVQAPNGLIAHLFGPIEGRRHDAFMLGESGLADKLRPLQRPNGEPYVIYGDPAYGLTRNILAPFRGAQLTHDQQEFNRRMSKLRVAVEWGFGKICQQFAFLDFKKNMKVLLQPVGKYYVVAALLTNCHTCLYNSQTGRYFELYPPSLEDY 394          
BLAST of mRNA_P-littoralis_Contig1556.3.1 vs. uniprot
Match: A0A6J8AKR8_MYTCO (DDE Tnp4 domain-containing protein n=5 Tax=Mytilus TaxID=6548 RepID=A0A6J8AKR8_MYTCO)

HSP 1 Score: 171 bits (433), Expect = 1.570e-48
Identity = 103/262 (39.31%), Postives = 153/262 (58.40%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTD---------CLEFFAPRFPQICKKIEAKGDHFNGVVLGVLVKQKAR--VTHIRASCVRCVAHGLAWQSVVFAHGMME-IWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQ----YRVYGDAAYPILS-HVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 750
            YP R +DL+  FGR  T+LS I NEV+D+ +DNH H ++D         CLE FA         +++     +G V  +   Q+ +  V +I+ S      H L +QS+V  +G++  ++GP  GRRHD+ +L  S +   L  ++   TT     + +YGD AYP+   ++   FRG  ++  Q  +NK +S VR+ VEW FGKV+ +F F+D+ KNLK+ LQ V KYY +AVLLTN  TC+ GS TG +FD++ P+LE Y
Sbjct:   45 YPSRLEDLEYIFGRSKTELSLIINEVLDYIHDNHCHLLSDFNMSWLSQECLERFAGAVFDRDGPLDSCWGFIDGTVRPICRPQENQRLVFNIKRS------HALKFQSIVTPNGIISNLFGPIEGRRHDAGMLRESDI---LTQMRVHMTTPEGRIFCIYGDPAYPVTDGYIIAPFRGGVISRNQMIFNKRMSAVRICVEWAFGKVLSLFAFLDYKKNLKLYLQPVGKYYTVAVLLTNCLTCLYGSETGIFFDVSPPTLEEY 297          
BLAST of mRNA_P-littoralis_Contig1556.3.1 vs. uniprot
Match: A0A6S7FVW6_PARCT (DDE Tnp4 domain-containing protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FVW6_PARCT)

HSP 1 Score: 172 bits (435), Expect = 3.400e-48
Identity = 98/253 (38.74%), Postives = 141/253 (55.73%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDCLE-FFAPRFPQI-CKKIEAKG---DHFNGVVLGVLVKQKARVTHIRASCV-RCVAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAYF 753
            YP R+ D+   FGR  ++L  IFNEV+D+ Y+ H HR+    + F +P+  QI    I  KG   D+  G V G + +      H R  C      H + +QSVV  +G++  + GP  G+RHDS++L  SGL   L  +   N     +YGD AYP+  H+   FR   LT A   +N+E+S+VRV+VEW FG + + F FVDF + +K+ L  V K Y +A LL NAHTC+  +I   +F +  PS+  YF
Sbjct:  104 YPCRYSDMVSRFGRNPSELCLIFNEVLDFLYERHHHRLQSWNQPFLSPQILQIYADAIHNKGAPLDNCFGFVDGTVRQIPRPKYHQRVMCNGHKRVHSIKFQSVVLPNGLIGNLAGPYEGKRHDSMMLQESGLLTNLQQIAFYNNNPLSIYGDPAYPLGVHLQAPFRERELTPAMAEFNREMSRVRVSVEWMFGNITKYFSFVDFKRQMKLHLSPVGKIYTVAALLQNAHTCLYENIVSHFFYLKPPSIHEYF 356          
BLAST of mRNA_P-littoralis_Contig1556.3.1 vs. uniprot
Match: UPI00077A71E6 (uncharacterized protein LOC107340903 n=3 Tax=Acropora TaxID=6127 RepID=UPI00077A71E6)

HSP 1 Score: 172 bits (437), Expect = 3.930e-48
Identity = 105/254 (41.34%), Postives = 146/254 (57.48%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYD--NHLHRVTDCLEFFAPRFPQICKKIEAKGDHFN---GVVLGVL--VKQKARVTHIRASCVRCVAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAA-LQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 750
            YP RW +L + FGR   +LS IFNE++   Y+  +HL    D +   A  F    + I  KG       G V G      +  R   I  S  + V H L +QSVV  +GM+  ++GP  GRRHD+ +L+ SGL  +L   L + N   Y +YGD AYP+  H+   FRG  LT  ++ +NK++S VR++VEW +GK+V+ F F+DF KNLK+ LQ V K Y +  +L N HTC+ GS TG +FD+  PSLE Y
Sbjct:  139 YPNRWCELTKLFGRAEPELSMIFNEILSDVYNRFSHLLESLDLIWLDADAFS---RAIYGKGAPLRDCWGFVDGTARPTTRPVRNQRIMFSGHKRV-HCLKFQSVVSPNGMICHLFGPVEGRRHDAFMLAESGLLPKLERRLNKPNGEPYVIYGDPAYPVRRHILAPFRGARLTPDEERFNKDMSTVRISVEWGYGKIVRYFAFLDFNKNLKVLLQPVGKMYVVGAILANCHTCLYGSQTGDFFDLDPPSLETY 388          
BLAST of mRNA_P-littoralis_Contig1556.3.1 vs. uniprot
Match: UPI00077AC7F2 (uncharacterized protein LOC107350804 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AC7F2)

HSP 1 Score: 171 bits (432), Expect = 1.300e-47
Identity = 107/258 (41.47%), Postives = 147/258 (56.98%), Query Frame = 1
Query:    1 LLQRRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYD--NHLHRVTDCLEFFAPRFPQICKKIEAKGDHFN---GVVLGVL--VKQKARVTHIRASCVRCVAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 750
            LL+  YP RW DL   FGR+  QLS IFN+V+D  Y+  NHL    D +      F Q    +EAKG   +   G + G    + +  R   I  S  +   H L +QSV   +G++  ++GP  GRRHD+ +L  SGL  +L  LQ      Y +YGD AY +  ++   FRG  LT+ ++ +N ++SKVR  VEW FGK+ Q F F+DF KNL++ LQ V KYY +A +L N HTC+ GS T  YF++  PSLE Y
Sbjct:  113 LLRLVYPSRWCDLAPVFGRDEPQLSLIFNKVMDDIYERFNHLLTSLDLVWLDPEMFSQA---VEAKGAPLHQCWGFIDGTPRPIARPIRNQRIMFSGHKRT-HCLKFQSVQAPNGIIAHMFGPIEGRRHDAFMLGISGLADKLERLQTPTGEPYVIYGDPAYGLTRNILAPFRGVQLTNDEQLFNTQMSKVRTCVEWGFGKICQNFAFLDFKKNLRVLLQPVGKYYLVASILVNCHTCLYGSQTSTYFNLEPPSLERY 366          
BLAST of mRNA_P-littoralis_Contig1556.3.1 vs. uniprot
Match: UPI00077A7035 (uncharacterized protein LOC107333236 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A7035)

HSP 1 Score: 167 bits (423), Expect = 5.170e-47
Identity = 100/257 (38.91%), Postives = 144/257 (56.03%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYD--NHLHRVTDCLEFFAPRFPQICKKIEAKGDHFNGVVLGVLVKQKARVT---------HIRASCVRCVAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 750
            YP RW DL+  FGR  ++LS IF+EV+D  +D  + L    D +      F Q+     A      G + G   +  AR T         H R  C++       +QSV   +G++  ++GP  G+RHD+ +L  SGL  +L   Q  N   Y +YGD AY +  ++   +RG  LTD Q+ +N ++SK+R  VEW FGK+ Q+F F+DF KNLK+ LQ + KYY +AV+L N HTC+ GS TG YF++  P+LE Y
Sbjct:   50 YPSRWCDLEAIFGRSESELSLIFHEVLDDIHDRFSDLLDSLDLIWLDPGLFSQVIHWKGAPLTQCWGFIDGT-PRPIARPTRNQQIMYSGHKRTHCIK-------FQSVQAPNGLIAHMFGPIEGKRHDAFMLGVSGLADKLRRFQRPNGEPYVIYGDPAYGLSRNILAPYRGVRLTDDQQEFNSQMSKMRCCVEWGFGKISQLFAFLDFKKNLKVLLQPIGKYYLVAVILINCHTCLYGSQTGAYFNLDPPTLETY 298          
BLAST of mRNA_P-littoralis_Contig1556.3.1 vs. uniprot
Match: A0A6S7GNP4_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GNP4_PARCT)

HSP 1 Score: 169 bits (427), Expect = 6.060e-47
Identity = 98/252 (38.89%), Postives = 144/252 (57.14%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDC-LEFFAPRFPQICKKIEAKGDHFN---GVVLGVL--VKQKARVTHIRASCVRCVAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 750
            YP RW DL + FGR   +LS +FN V++  Y    H +T   L +  P        +  KG   N   G + G    + +  R  ++  S  + + H + +QSV+  +G++  ++GP  GRRHD+ +L  SGL   L  + + N   Y VYGD AY I  H+   F+G  LT+ Q+ +N+++S+VRV VEW FGK+ Q F ++DF KNLK+ LQ VAKYYA+  LL N HTC+ GS+   +F++  P LE Y
Sbjct:  110 YPNRWCDLVKIFGRSEAELSILFNMVINDIYTRFNHLLTSLDLAWLDPAI--FADAVHCKGAPLNQCWGFIDGTTRRIARPVRNQNVMYSGHKRI-HCIKFQSVLAPNGLIAHLFGPIEGRRHDAFMLGVSGLLPLLERIIKPNGEPYVVYGDPAYGISRHIISPFKGAHLTEPQQQFNRDMSEVRVCVEWGFGKIAQYFAYLDFQKNLKVLLQPVAKYYAVGALLINCHTCLYGSVASSFFNLDPPLLEDY 358          
BLAST of mRNA_P-littoralis_Contig1556.3.1 vs. uniprot
Match: A0A6J8AX30_MYTCO (DDE Tnp4 domain-containing protein n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AX30_MYTCO)

HSP 1 Score: 167 bits (423), Expect = 1.580e-46
Identity = 106/268 (39.55%), Postives = 147/268 (54.85%), Query Frame = 1
Query:    1 LLQRR--YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDC-LEFFAPRFPQICKKIEAKGD----HFNGVVLGVLVKQKARVT---------HIRASCVRCVAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQ-YRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 750
            LL RR  YP R  DL+  FGR  T +S I N V+++ YD H H + D    + + R  Q      A  D    +  G + G  V+   R T         H R        H + +QS+V  +G++  ++GP  GRRHD+ LL  SG+ G L       T   Y +YGD AYP+ +H+ + FRG  ++ AQ  +NK++S VR  VEW FGK++ +F F+D+ KNLK+ LQ V KYY +  +L N HTC+ GS TG YFD+  PSLE Y
Sbjct:   84 LLLRRLTYPSRLSDLKSVFGRSVTAMSIIINTVLNFVYDAHNHLLHDLNSNWLSHRHLQEYADAIAARDAPLLNCWGFIYGT-VRPLCRPTTNQRILFNGHKRV-------HAIKFQSIVAPNGLVANMYGPIEGRRHDAGLLRESGICGELQTHMTTPTGDIYVIYGDPAYPMTTHIIKTFRGGVISAAQARFNKKISAVRTCVEWTFGKILTLFAFLDYKKNLKLYLQPVGKYYLVGTILVNCHTCLYGSETGHYFDIDPPSLENY 343          
BLAST of mRNA_P-littoralis_Contig1556.3.1 vs. uniprot
Match: UPI000F5553D4 (uncharacterized protein LOC113664837 isoform X1 n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F5553D4)

HSP 1 Score: 167 bits (424), Expect = 1.610e-46
Identity = 99/252 (39.29%), Postives = 138/252 (54.76%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDCLEFFAPRFPQICKKIEAKGDHFNGVVLGVL------VKQKARVTHIRASCVRCVAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 750
            YP RW DL   FGR  ++LS IFN+++D  YD   H + D L+          + +  KG    G   G +      + +  R   I  S  R   H L +QSV   +GM+  ++GP  GRRHD+ +L  SGL+ +L    + N   Y +YGD AY I  ++   FR   LTD ++ +N  +S+V+ +VEW FGK+ Q F ++DF KNLKI LQ V KYY +A +L N HTC+ GS T  YF +  P LE Y
Sbjct:  109 YPNRWSDLVPVFGRTVSELSLIFNKIMDDIYDR-FHHLLDSLDLVWLDPEAFAEAVNEKGAPLTGC-WGFIDGTPRPIARPVRNQRIMFSG-RKRTHCLKFQSVQAPNGMIVHMFGPIEGRRHDAFMLGVSGLSAKLRRFVQPNGEPYVIYGDPAYGITQNIIAPFRQAHLTDDEQEFNMRMSRVQTSVEWSFGKICQNFAYLDFKKNLKILLQPVGKYYLVACILINCHTCLYGSQTTTYFSLEPPPLETY 357          
BLAST of mRNA_P-littoralis_Contig1556.3.1 vs. uniprot
Match: UPI00106B81BB (uncharacterized protein LOC114518718 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B81BB)

HSP 1 Score: 164 bits (414), Expect = 4.210e-46
Identity = 98/270 (36.30%), Postives = 140/270 (51.85%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVD----------------W----AYDNHLHR----VTDCLEFFAPRFPQICKKIEAKGDHFNGVVLGVLVKQKARVTHIRASCVRCVAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 750
            YP RW DL   FGR  ++LS IFN+++D                W     + N +H     +T C  F       I + I  +   F+G              H R  C++       +QSV   +G++  ++GP  GRRHD+ +L  S L  +L  +++ N   Y +YGD AY +  ++   FRG  LT  ++ +NK +SK+RV+VEW FGK+ Q F F+DF KN KI LQ + KYY +  LLTN HTC+ GS+T  YF +  PSLE Y
Sbjct:   13 YPNRWCDLVSIFGRSESELSLIFNKILDDICDRFSYLLDSLDLVWFDPELFSNPIHNKGAPLTQCWGFIDGTVRPIPRPIRNQQIMFSG--------------HKRTHCIK-------FQSVHAPNGLIANMFGPVEGRRHDAFILGVSNLADKLCRIRQPNGEPYIIYGDPAYGVTDNILAPFRGVFLTADEQEFNKRMSKLRVSVEWGFGKIAQYFAFLDFKKNQKILLQPIGKYYLVGTLLTNCHTCLYGSLTSSYFGVQPPSLETY 261          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1556.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000A2A66BF9.700e-5544.22protein ALP1-like isoform X1 n=2 Tax=Exaiptasia di... [more]
A0A6J8AKR8_MYTCO1.570e-4839.31DDE Tnp4 domain-containing protein n=5 Tax=Mytilus... [more]
A0A6S7FVW6_PARCT3.400e-4838.74DDE Tnp4 domain-containing protein n=3 Tax=Paramur... [more]
UPI00077A71E63.930e-4841.34uncharacterized protein LOC107340903 n=3 Tax=Acrop... [more]
UPI00077AC7F21.300e-4741.47uncharacterized protein LOC107350804 n=1 Tax=Acrop... [more]
UPI00077A70355.170e-4738.91uncharacterized protein LOC107333236 n=1 Tax=Acrop... [more]
A0A6S7GNP4_PARCT6.060e-4738.89DDE Tnp4 domain-containing protein n=1 Tax=Paramur... [more]
A0A6J8AX30_MYTCO1.580e-4639.55DDE Tnp4 domain-containing protein n=2 Tax=Mytilus... [more]
UPI000F5553D41.610e-4639.29uncharacterized protein LOC113664837 isoform X1 n=... [more]
UPI00106B81BB4.210e-4636.30uncharacterized protein LOC114518718 n=1 Tax=Dendr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1556contigP-littoralis_Contig1556:2592..3713 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog7668.SPU_016560-tr
PFAMsDDE_Tnp_4
Model size762
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.42e-41
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota,3A38W@33154|Opisthokonta,3BS4I@33208|Metazoa,3D9UV@33213|Bilateria
DescriptionDDE superfamily endonuclease
Cds size762
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789742.4350958-CDS-P-littoralis_Contig1556:2591..31071680789742.4350958-CDS-P-littoralis_Contig1556:2591..3107Pylaiella littoralis U1_48CDSP-littoralis_Contig1556 2592..3107 -
1680789742.44757-CDS-P-littoralis_Contig1556:3467..37131680789742.44757-CDS-P-littoralis_Contig1556:3467..3713Pylaiella littoralis U1_48CDSP-littoralis_Contig1556 3468..3713 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1556.3.1prot_P-littoralis_Contig1556.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1556 2592..3713 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1556.3.1

>prot_P-littoralis_Contig1556.3.1 ID=prot_P-littoralis_Contig1556.3.1|Name=mRNA_P-littoralis_Contig1556.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=254bp
LLQRRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDCLEFF
APRFPQICKKIEAKGDHFNGVVLGVLVKQKARVTHIRASCVRCVAHGLAW
QSVVFAHGMMEIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYG
DAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPF
VDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY
FAF*
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mRNA from alignment at P-littoralis_Contig1556:2592..3713-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1556.3.1 ID=mRNA_P-littoralis_Contig1556.3.1|Name=mRNA_P-littoralis_Contig1556.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1122bp|location=Sequence derived from alignment at P-littoralis_Contig1556:2592..3713- (Pylaiella littoralis U1_48)
TTGCTCCAACGCAGGTATCCTGGACGCTGGCAGGACCTGCAAAGGGAGTT CGGCCGAGAGTACACCCAGTTGAGTCGAATTTTCAACGAGGTGGTCGACT GGGCGTACGACAACCACCTGCACAGGGTGACTGACTGCCTGGAGTTCTTC GCTCCACGCTTCCCTCAGATATGCAAGAAGATAGAAGCGAAAGGTGACCA TTTTAACGGCGTCGTACTCGGTGTTCTCGTGAAGCAGAAAGCCAGGGTTG TGCCGCTGCCGCCGGTTGATAATTGCCCGCCTGAGCCGAGGCCCCCTTTT TTATGTTTGGCATACAGACACTAGTACGATGTAAACACAAAGCCACGTGA ATGATACACAACAAAGCAGCAGCAGCCACCTTAGCTACAGCGGTTTTAAC CTTGCCACAGCTGTGGTTTTGCGCGCACTGCTGGTTGTGCAATGAGGAGA GTTCGTTGCGCTCTCTGCTTGTCTCTCTCTTTCTCTCTCGTTCTGTGTGT GTTGTGGGCGCACGGTAGCAGCAGCACACACAGAAGTGCAGCGTTTTGGA CACAGAGCCCCAGATAACCAAACGGACCTTAGTCATGGACGTAACAAGGA AAACAGGTCACACATATCAGAGCCTCTTGTGTGCGTTGCGTCGCCCACGG CCTTGCTTGGCAATCAGTTGTCTTTGCTCACGGAATGATGGAAATTTGGG GACCGGAGACAGGGCGGCGACACGACTCCCTTCTTCTGTCGAGGAGCGGA CTGAACGGGAGACTCGCCGCTCTGCAGGAAGGCAACACTACGCAGTACAG GGTGTACGGCGATGCTGCATACCCCATCTTGTCTCACGTCGACCGGGGTT TCCGCGGAGAGGGTCTCACAGATGCGCAGAAGGCCTACAACAAGGAGCTT TCTAAGGTCAGGGTGGCGGTGGAGTGGCAGTTCGGCAAGGTCGTGCAGAT TTTCCCGTTTGTCGACTTCGCGAAAAACCTGAAGATCAGGCTGCAGGCGG TCGCGAAGTACTACGCCTTGGCTGTACTGCTCACCAACGCGCACACCTGC ATCTCCGGGAGCATCACCGGCTTCTACTTCGACATGACCGCGCCGTCACT AGAGGCGTACTTTGCGTTCTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1556:2592..3713-

>mRNA_P-littoralis_Contig1556.3.1 ID=mRNA_P-littoralis_Contig1556.3.1|Name=mRNA_P-littoralis_Contig1556.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=762bp|location=Sequence derived from alignment at P-littoralis_Contig1556:2592..3713- (Pylaiella littoralis U1_48)
TTGCTCCAACGCAGGTATCCTGGACGCTGGCAGGACCTGCAAAGGGAGTT
CGGCCGAGAGTACACCCAGTTGAGTCGAATTTTCAACGAGGTGGTCGACT
GGGCGTACGACAACCACCTGCACAGGGTGACTGACTGCCTGGAGTTCTTC
GCTCCACGCTTCCCTCAGATATGCAAGAAGATAGAAGCGAAAGGTGACCA
TTTTAACGGCGTCGTACTCGGTGTTCTCGTGAAGCAGAAAGCCAGGGTCA
CACATATCAGAGCCTCTTGTGTGCGTTGCGTCGCCCACGGCCTTGCTTGG
CAATCAGTTGTCTTTGCTCACGGAATGATGGAAATTTGGGGACCGGAGAC
AGGGCGGCGACACGACTCCCTTCTTCTGTCGAGGAGCGGACTGAACGGGA
GACTCGCCGCTCTGCAGGAAGGCAACACTACGCAGTACAGGGTGTACGGC
GATGCTGCATACCCCATCTTGTCTCACGTCGACCGGGGTTTCCGCGGAGA
GGGTCTCACAGATGCGCAGAAGGCCTACAACAAGGAGCTTTCTAAGGTCA
GGGTGGCGGTGGAGTGGCAGTTCGGCAAGGTCGTGCAGATTTTCCCGTTT
GTCGACTTCGCGAAAAACCTGAAGATCAGGCTGCAGGCGGTCGCGAAGTA
CTACGCCTTGGCTGTACTGCTCACCAACGCGCACACCTGCATCTCCGGGA
GCATCACCGGCTTCTACTTCGACATGACCGCGCCGTCACTAGAGGCGTAC
TTTGCGTTCTAG
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