prot_P-littoralis_Contig155.95.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: D7FMS6_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS6_ECTSI) HSP 1 Score: 460 bits (1184), Expect = 9.880e-161 Identity = 247/330 (74.85%), Postives = 264/330 (80.00%), Query Frame = 0
Query: 1 MGGVFEEEG----AEREGXXXXXXXXXXXXXXXXXXATVLDGVLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPDWRLFVSWMAALCTDLTSMVSKIPGSDPQNPRYVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 326
M GVFEEEG AE EG XXXX ATVLD VLWKLG DKFHRDFRN +LLGLVQDRFPKSKLAYL VKVML+NS+PTERKV+E VSASISAR LFDKLC+ W+T NLTKNK VPDWR FVSWM+ALCTDLTSMVSKIPGSD QNPRYVVNMAKMVQY+R +LVKCTARDRYGKETARI+EILLQNK+LDQQQVGEMAMIPPSDARERLY+L++DRMVSVQEVPKRAD NP+TTFYLWTIKHDQVAQVVL++LYKAMLNMRLRRKFVY NDK LFIHDA ENLMFFNTF
Sbjct: 1 MDGVFEEEGEGGHAEEEGVLGGXXXXIGAG------ATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASISARDLFDKLCEAWQTNNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKALFIHDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLMFFNTF 324
BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A0W8C9C8_PHYNI (DNA-directed RNA polymerase III subunit RPC3 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9C8_PHYNI) HSP 1 Score: 188 bits (477), Expect = 7.980e-51 Identity = 104/300 (34.67%), Postives = 176/300 (58.67%), Query Frame = 0
Query: 39 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPD----WRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 326
++W+ G + RD R+ + + + + +A + V ML++SAP ER+ +EP SA +SAR LF+ + KN P+ WRL ++++ +C D + MV K+ DP R YVV+M K+V++++ + +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY+L D+++ +QE+PKRADHNP+ TF+ W++ Q+ V + + ++ +R RRKF +KEL +ND +K D++ RSLDRLD A++ LD LM + F
Sbjct: 382 LVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVTAMLQHSAPREREKDEPTSAPVSARDLFN--------MESVKNALPPEANNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPIQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARVTERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 669
BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: G4Z0C0_PHYSP (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z0C0_PHYSP) HSP 1 Score: 184 bits (468), Expect = 5.920e-50 Identity = 101/300 (33.67%), Postives = 174/300 (58.00%), Query Frame = 0
Query: 39 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPD----WRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 326
++W+ G + RD R+ + + + + +A + V ML++S+P ER+ +EP S +SAR LFD + K P+ WRL ++++ +C D + MV K+ DP R YVV+M K+V++++ + +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY+L D+++ +QE+PKRADHNP+ TF+ W++ Q+ + + + ++ +R RRKF +KEL +ND +K D++ RSLDRLD A++ LD LM + F
Sbjct: 313 LVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVAAMLQHSSPREREKDEPTSFPVSARDLFD--------MESVKKALPPEANNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPTQTRAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 600
BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: H3GD40_PHYRM (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GD40_PHYRM) HSP 1 Score: 184 bits (467), Expect = 9.140e-50 Identity = 99/296 (33.45%), Postives = 176/296 (59.46%), Query Frame = 0
Query: 39 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPDWRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 326
++W+ G + RD R+ + + + + +A + V+ ML++S+P ER+ +EP S +SAR LF+ + + + N WRL ++++ +C D + MV K+ DP R YVV+M K+V++++ + + +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY+L D+++ +QE+PKRADHNP+ TF+ W++ Q+ + + + ++ +R RRKF +KEL +ND +K D++ RSLDRLD A++ LD LM + F
Sbjct: 320 LVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVEAMLQHSSPREREKDEPTSFPVSARDLFE-MESVKKALPSEANNP---WRLLLNYIMVMCRDKSGMVMKVSQEAFDPTQARSGDGGQYVVHMQKIVEFLQQATTRAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQTRIAERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 607
BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A3R7FY14_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FY14_9STRA) HSP 1 Score: 182 bits (462), Expect = 8.630e-49 Identity = 99/296 (33.45%), Postives = 171/296 (57.77%), Query Frame = 0
Query: 39 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPDWRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 326
++W+ G + RD R+ + + + + +A + V ML++SAP ER+ +EP+SA +SAR LF N ++ WRL ++++ +C D + MV K+ DP R YVV+M K+V++++ +D++G +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY+L +++V +QE+PKRADHNP+ TF+ W++ + + + + ++ +R RRKF +KEL ND +K D++ RSLDRLD A++ LD LM + F
Sbjct: 364 LVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVAAMLQHSAPREREKDEPISAPVSARDLFG----MESVKNALPSESNNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPSQARSGDGGQYVVHMQKIVEFLQQVTTHAYIQDKFGAASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYGEKLVKMQEIPKRADHNPAFTFFCWSVDVPHMQTRITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEGNDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 651
BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A0P1AWK6_PLAHL (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWK6_PLAHL) HSP 1 Score: 182 bits (461), Expect = 1.050e-48 Identity = 100/296 (33.78%), Postives = 175/296 (59.12%), Query Frame = 0
Query: 39 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPDWRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 326
++W+ G + RD R+ + + + + +A + V+ ML++S+P ER+ +E SA +SAR LF+ + + + N WRL ++++ +C D + M+ K+ DP R YVV+M K+V++++ + V +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY+L D++V +QE+PKRADHNP+ TF+ W++ Q+ + + + ++ +R RRKF +KEL + D +K D++ RSLDRLD A++ LD LM F F
Sbjct: 354 LVWRFGMTQMLRDLRHKTCIRFASENI--NAVAGVIVEAMLQHSSPREREKDEATSAPVSARDLFN-MESVKKALPSESNNP---WRLLLNYITVMCRDKSGMIMKVAQEAFDPTKARASDGGQYVVHMQKIVEFLQQATVHAYIQDKYGVASARIVRLLMEKRQLEQKSIGELALLPSNDARHRLYELYTDKLVKLQEIPKRADHNPAFTFFCWSVDVLQMQTRITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEALDIDK--FDKLSRSLDRLDRAIIHLDGMLMLFRDF 641
BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A3M6VEE8_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VEE8_9STRA) HSP 1 Score: 180 bits (457), Expect = 4.540e-48 Identity = 99/300 (33.00%), Postives = 173/300 (57.67%), Query Frame = 0
Query: 39 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPD----WRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 326
++W+ G + RD R+ + + + + +A + V ML++SAP ER+ +EP S+ +SAR LFD + K P+ WRL ++++ +C D + MV K+ DP R YVV+M K+V++++ + +++YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY+L D+++ +QE+ KRADHNP+ TF+ W++ Q+ + + + ++ +R RRKF +KEL +ND +K D++ RSLDRLD ++ LD LM + F
Sbjct: 366 LVWRFGVTQLLRDLRHKACVRFATENI--NAVAGVIVAAMLQHSAPHEREKDEPTSSPVSARDLFD--------MESVKKALPPEANNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPTQARAGDGGQYVVHMQKIVEFLQQATTHAYVQEKYGVASARIVRLLMEQRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEISKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDK--FDKLSRSLDRLDRGIIHLDGMLMLYRDF 653
BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A5D6XL36_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL36_9STRA) HSP 1 Score: 175 bits (444), Expect = 3.480e-46 Identity = 101/300 (33.67%), Postives = 171/300 (57.00%), Query Frame = 0
Query: 39 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPD----WRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 326
++W+ GAD+ RD R+ + + + + +A + V ML++S+P ER+ +E S ++AR LF + K+ D WRL ++++ +C D + MV K+ D R YVV+M K+V ++R + +D++G +ARI+ +L++ + L+QQ +GE+A++P +DAR RLY+L +R+V +QEVPKRADHNP+ T Y W++ ++ + V + + ++ +R RRK +KEL +ND K D++ R+LDRLD A+L+LD LM + F
Sbjct: 375 LVWRFGADQLMRDLRHAACVRFATENI--NTVAGVIVAAMLQHSSPHEREKDEATSYPVTARELF--------AVPAVKSALPKDSKDTWRLLLNYITVMCRDKSGMVMKVAPETFDATQARAGDGGQYVVHMQKIVAFLRQATTHAYVQDKFGVPSARIVRLLVEKRQLEQQTIGELALLPSNDARRRLYELFAERLVKLQEVPKRADHNPAFTLYCWSVDVPRMERSVRERVEASLCKLRARRKLEAEQNKELIARSDQLVEANDVAK--FDKLSRALDRLDRAVLQLDAMLMLYRDF 662
BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A484E8N6_BRELC (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8N6_BRELC) HSP 1 Score: 173 bits (438), Expect = 2.040e-45 Identity = 98/301 (32.56%), Postives = 173/301 (57.48%), Query Frame = 0
Query: 39 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPD-----WRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 326
++W+ G + R+ R+ + + + + +A + V MLE+S+P ER+ NE SA +SAR L++ T K +P WRL ++++ +C D + M+ K+ D R YVV+M K+V++++ + +DR+G +ARI+ +L++ + L+Q+ +GE+A++P ++AR RLY+L D++V +QE+PKRADHNP+ TF+ W++ Q+ + + + ++ +R RR F +KEL ++D +K D++ RSLDRLD A+++LD LM F F
Sbjct: 359 LVWRFGMTQMLRELRHKACIRFATENV--NAVAGVIVTAMLEHSSPRERESNESTSAPVSARDLYNME---------TVKKALPSEANNPWRLLLNYITVMCRDKSGMMMKVAQETFDSTQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDRFGVASARIVRLLIEKRQLEQKTIGELALLPSNEARHRLYELYTDKLVKMQEIPKRADHNPAFTFFCWSVDIPQMHVRITERVQGSLCRLRRRRTFEAEENKELIARSEQLVEAHDLDK--FDKLSRSLDRLDRAIIQLDGMLMLFRDF 646
BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A024GFJ4_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GFJ4_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.050e-44 Identity = 89/297 (29.97%), Postives = 175/297 (58.92%), Query Frame = 0
Query: 39 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPD-WRLFVSWMAALCTDLTSMVSKIPGSDPQ--------NPRYVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 326
++W+ G D+ R+ R+++ + + + +A + V ML S ER+ NEP S ++AR ++ K+ + + + K++ D WRL ++++A + D + M++++ +YVV+M + Y++ + + +D++G ++ARI+ ++L+ + L+Q+ +GE+A++P ++AR RLY L +D+++ +QE+PKR+DHNP T Y W++ + +V+ + + ++ +R RR F+ +KEL + ND EK D++ + LDRLD ++L+LDENLM + F
Sbjct: 360 LVWRCGTDQLLRELRHDAFVRFAMENV--NHVAGVIVSAMLSYSMSHERESNEPTSFPMTAREIY-KVDEVKQALP----KEIKDTWRLLLNYLAVMVRDKSGMLTRVAAEKADATTTQGGDGGQYVVHMKNITDYLKQATMHAYIQDKFGVQSARIVRLILEKRQLEQKSIGELALLPLNEARRRLYDLYRDKLIHLQEIPKRSDHNPVHTMYTWSVNTFHIERVIRERVQDSICKLRSRRDFIAKENKELIARSSQLVEENDLEK--FDKLSQGLDRLDRSILQLDENLMLYRDF 647 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig155.95.1 ID=prot_P-littoralis_Contig155.95.1|Name=mRNA_P-littoralis_Contig155.95.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=327bpback to top |