prot_P-littoralis_Contig155.88.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig155.88.2
Unique Nameprot_P-littoralis_Contig155.88.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length399
Homology
BLAST of mRNA_P-littoralis_Contig155.88.2 vs. uniprot
Match: A0A6H5JK26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK26_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 3.800e-103
Identity = 199/400 (49.75%), Postives = 241/400 (60.25%), Query Frame = 0
Query:   15 VREGRIAGVSRSGNGRXXXXXXXXXXXSVKPGRSKGEGGQAIAWQTMSFEKLESSKA---NSSSSTSPETDPGTAYVFPFFRDDEEGQDGRXXXXXXXXXXXXXXVASVGGQQ----GAVGREGVRVLLRTASDRAAASKLSATADNGGLDYRNPLFHVASGNAEKAVASLFPEDGQAESCGSEINGHNPMFRRSASLNGRPRPKVNRDIRRASS------TLSADGS-KAXXXXXXXXXXXXXXXXXXXXXXKMKKALYEHVGRMNVGPFLVDDGDKEGV--GHGGFRLDTFARNEGEAGGRAHFKFVFTLTDAAAPSEGEDEDAKKLRPVVDAIHNRSTGKLRVQVNDGRKLIAEENAAVNIPLVNVGVALFNPKTMAKGHHLYTLSLNGRTLFSVLA 398
            +R G  A   RSG+GR           S+  GR KGEG QA AW+TMSFEKL+++     N SSSTSPETDPG + VFP F   EE   G               V   GG Q    GA G    ++  R A+++ +A+K  + A    +D+RNP+F  A+GNAEKA+ASL+P     ES  S +NG NPMF+RS S  GRPRP+ N ++ R         +++AD   K                       K KK LYEHVGRMNV PFL D  D      GH GFRLDTFARNEGE GG AHFKFVFTL  AA P EGED  AKK RP++DAIH R+TGKLRV+VNDGR++   E+AAV+I + N+GV  FNP+TM+KGHHLYTLSL GRTLFSVLA
Sbjct:    5 LRGGTTARGKRSGDGRERRLRHERAA-SMPLGRPKGEGMQASAWRTMSFEKLQNTSKCVNNCSSSTSPETDPGASSVFPSFV--EEDNVGEEEELSASAGSSKDMVEGRGGDQTRARGAEGGGLSKLSRRPAAEKKSAAKSKSQAQLVKMDFRNPMFRAANGNAEKAIASLYPAQDSEESTRSAMNGSNPMFKRSVSDAGRPRPRENPELSRGGGGSDLGKSVAADSKGKGGEDNGSRDEKQQPRKEKGKSKDKTKKPLYEHVGRMNVRPFLSDPSDANDYVSGHRGFRLDTFARNEGETGGTAHFKFVFTLDGAAVPDEGED--AKKARPMLDAIHERATGKLRVRVNDGREISTTESAAVDIAITNIGVVFFNPRTMSKGHHLYTLSLTGRTLFSVLA 399          
BLAST of mRNA_P-littoralis_Contig155.88.2 vs. uniprot
Match: D7FMS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS3_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 5.120e-67
Identity = 131/217 (60.37%), Postives = 154/217 (70.97%), Query Frame = 0
Query:  192 INGHNPMFRRSASLNGRPRPKVNRDIRRASS------TLSAD--GSKAXXXXXXXXXXXXXXXXXXXXXXKMKKALYEHVGRMNVGPFLVDDGDKEGV--GHGGFRLDTFARNEGEAGGRAHFKFVFTLTDAAAPSEGEDEDAKKLRPVVDAIHNRSTGKLRVQVNDGRKLIAEENAAVNIPLVNVGVALFNPKTMAKGHHLYTLSLNGRTLFSVLA 398
            +NG NPMF+RS S  GRPRP+ N ++ R         +L+AD  G               XXXXXXXXXX  KK +YEHVGRM+V PFL D  D      GH GFRLDTFARNEGE GG+AHFKFVFTL D   P EGE E++KK RPV+DAIH R+TGKLR++VNDGR++   E+AAV+I + NVGV LFNP+TM+KGHHLYTLSL GRTLFSVLA
Sbjct:    1 MNGSNPMFKRSVSDAGRPRPRTNPELSRGGGGSDLGKSLAADSKGKGGEDKGSRVEQQQPXXXXXXXXXXXTKKPMYEHVGRMDVRPFLSDPNDANDYVSGHRGFRLDTFARNEGETGGKAHFKFVFTL-DGVVPGEGEGEESKKARPVLDAIHERATGKLRLRVNDGREMSTTESAAVDIAITNVGVVLFNPRTMSKGHHLYTLSLTGRTLFSVLA 216          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig155.88.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK26_9PHAE3.800e-10349.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMS3_ECTSI5.120e-6760.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 233..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig155contigP-littoralis_Contig155:415352..430805 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig155.88.2mRNA_P-littoralis_Contig155.88.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig155 414821..433371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig155.88.2 ID=prot_P-littoralis_Contig155.88.2|Name=mRNA_P-littoralis_Contig155.88.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=399bp
MEPVRSQSLRCNEDVREGRIAGVSRSGNGREGRLAATNTSSSVKPGRSKG
EGGQAIAWQTMSFEKLESSKANSSSSTSPETDPGTAYVFPFFRDDEEGQD
GRQEDGGGGGAPDEDDVASVGGQQGAVGREGVRVLLRTASDRAAASKLSA
TADNGGLDYRNPLFHVASGNAEKAVASLFPEDGQAESCGSEINGHNPMFR
RSASLNGRPRPKVNRDIRRASSTLSADGSKAAAEEAAAAAAAAEEKQAKK
KKEKMKKALYEHVGRMNVGPFLVDDGDKEGVGHGGFRLDTFARNEGEAGG
RAHFKFVFTLTDAAAPSEGEDEDAKKLRPVVDAIHNRSTGKLRVQVNDGR
KLIAEENAAVNIPLVNVGVALFNPKTMAKGHHLYTLSLNGRTLFSVLA*
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