prot_P-littoralis_Contig155.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig155.3.1
Unique Nameprot_P-littoralis_Contig155.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length65
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig155.3.1 vs. uniprot
Match: A0A6H5JW31_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW31_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 1.400e-5
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0 
Query:    1 HWGQRNGRIVLDEQGTHLFDGQLTFPYNETGSYLHATRVP 40
            H  QR  RI LD+ G HLF+GQL+F Y++ G  L ATR+P
Sbjct:   66 HHTQRRQRITLDDNGVHLFNGQLSFAYSDVGCSLWATRLP 105
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig155.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JW31_9PHAE1.400e-555.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig155contigP-littoralis_Contig155:12276..12470 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig155.3.1mRNA_P-littoralis_Contig155.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig155 12276..12470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig155.3.1 ID=prot_P-littoralis_Contig155.3.1|Name=mRNA_P-littoralis_Contig155.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=65bp
HWGQRNGRIVLDEQGTHLFDGQLTFPYNETGSYLHATRVPHQPSAFAAAT
ALQAAPGFPSSGNSD
back to top