mRNA_P-littoralis_Contig154.63.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig154.63.1 vs. uniprot
Match: D7FR51_ECTSI (DNA topoisomerase VI subunit B-like protein Topoisomerase 6 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR51_ECTSI) HSP 1 Score: 998 bits (2581), Expect = 0.000e+0 Identity = 535/674 (79.38%), Postives = 557/674 (82.64%), Query Frame = 1
Query: 43 MGKAKGEVVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPLIALAIEEFTEAEFNEHRGMDNRDVVDAGLFTASGRKKSTSKAAKAASTPSAAIEGASADSXXXXXXXXXXXXXXXXXXXXAVPDTKEKKGRSKGDC--LYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVISGCSKDLKDTPGFLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEITVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPSLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLTKDLSSIDRPLSERIIAELGEGFRPKMAPSELTVKMISRLTQMLKDVKRFKPPDGACLSPAGEYNLRLGIIKEMQPLYVATYSEKPAVLEGHPFIVEAGVSLGGAEVKEGVNVYRFANRIPLLFEAGSDVVTRVATKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKRALQQCCLQLKAHLLRRNALRDQKERKKVLTKYIPDVSRAVFGLLTAMQKRARDTEEENDGEVSKRAKGGGSRSGGATMSSASKARIMSSLDRKQVTEKTLALGLSAAVNQHDAEAAKEETAAAGRGTHARQ 2058
MGK GE VKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALP I+L IEEFTE EFNEHRGMDNRDVVDAGLF ASG KKSTSKA KA P+ A EG++ D A D KKGRSKGD LYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQV+SGCS D+KD P FLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTE+TVCVSGNW TYKSRVLQYLQQLAIITPYA+LELEYH+HANPKKDLTAVYRRRSEQMP LAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFL KDLSSIDRPLSERIIAELGEGF PKM PS LTVKM+SRLTQML+DVKRFKPPDGACLSPAGEYNLR +VKEGVNVYRFANRIPLLFEAGSDVVTRVA KRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVK ALQQCC QL+ HLLRRNALR+QKERKKVLTKYIPDVSRAVFGLLTAMQKRARD EE+ G G R+ GAT +K +IM+SLD K+VTEKTLA GLSAAVNQHDAEAAKEE+ AAGRGTH+RQ
Sbjct: 1 MGKGSGEAVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEEEFNEHRGMDNRDVVDAGLFKASGGKKSTSKATKALPKPAVAEEGSADDPQEPSAAAGATAADLDPKEKKAKND---KKGRSKGDSHSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSSDVKDPPNFLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEMTVCVSGNWQTYKSRVLQYLQQLAIITPYAELELEYHSHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMQPSALTVKMVSRLTQMLRDVKRFKPPDGACLSPAGEYNLR--------------------------------------QVKEGVNVYRFANRIPLLFEAGSDVVTRVAMKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCQQLRTHLLRRNALREQKERKKVLTKYIPDVSRAVFGLLTAMQKRARDGEEDKGGGAG----GASKRARGAT----AKTQIMASLDSKEVTEKTLAAGLSAAVNQHDAEAAKEESVAAGRGTHSRQ 625
BLAST of mRNA_P-littoralis_Contig154.63.1 vs. uniprot
Match: W7U7C7_9STRA (Dna topoisomerase 6 subunit b n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7C7_9STRA) HSP 1 Score: 662 bits (1709), Expect = 4.800e-228 Identity = 343/598 (57.36%), Postives = 430/598 (71.91%), Query Frame = 1
Query: 49 KAKGEVVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPLIALAIEEFTEAEFNEHRGMDNRDVVDAGLF-TASGRKKSTSKAAKAASTPSAAIEGASADSXXXXXXXXXXXXXXXXXXXXAVPDTKEKKGRSKGDCLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVISGCSKDLKDTPGFLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEITVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPSLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLTKDLSSIDRPLSERIIAELGEGFRPKMAPSELTVKMISRLTQMLKDVKRFKPPDGACLSPAGEYNLRLGIIKEMQPLYVATYSEKPAVLEGHPFIVEAGVSLGGAEVKEGVNVYRFANRIPLLFEAGSDVVTRVATKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKRALQQCCLQLKAHLLRRNALRDQKERKKVLTKYIPDVSRAVFGLLTAMQKRARDTEEEN 1839
K + EVV+SK+PAEFF+++Q+I GFDN G+SLYTT+RELVEN+LDAAESI LP +++ IEE TE E NE RGM++R+ VD GLF A+G+++S + I+ A++ + + +KKG +G YYRV C+DNG GM H+KIPDMLG VLSSSKYGVRQ RGK+G+G+KMALIWSKKSTGLPI+V S S + +++ CVLDIDIY+N+P V H K+ N +GWRGT I V V GNW TYK+ ++ Y QQLAIITPYA +E + +N +++ Y RRSE MP A EVKHHP S+N+L++QQLI RT K + FL +L+ + RPL+ RI+ ELG GF M P ++ RLT MLK + FK PDG+CLSPAGEYNLRLGI+KE+ P YVAT SE+ A EGHPF+VEAGVSLGG +K+G+NVYRFANRIPLLFEAG+DVVT+VA +RINW SYK+D KRD+IGVFVS VSTKIPFKGT KEYIGDDTE I+K+VK ALQ+CC QLK HLL RNA RD KERK+ L +Y+PDVSRA+ +L ++ KR R EN
Sbjct: 4 KNRIEVVESKTPAEFFSEHQSICGFDNPGRSLYTTVRELVENALDAAESIQELPYVSVVIEEITEDELNELRGMESRERVDLGLFHKATGKRRSGGE-----------IQEVLAENMKELHSDALEKQMGQN----SAALSNKKKG-DRGARNYYRVTCEDNGCGMAHEKIPDMLGRVLSSSKYGVRQTRGKFGLGSKMALIWSKKSTGLPIEVRSAHSLEENHPAAYISHCVLDIDIYRNQPFVKLHEKVANIKGWRGTRIDVVVEGNWSTYKTHIMTYFQQLAIITPYAHMEFTFRTLSNASREVITQYARRSEHMPPPAQEVKHHPSSINHLIIQQLIKRTSTKTFLNFLCTELACVTRPLAARIVKELGNGFAENMVPEDIDANKTIRLTSMLKSISIFKLPDGSCLSPAGEYNLRLGIMKELHPDYVATVSEQAAAFEGHPFVVEAGVSLGGNALKDGINVYRFANRIPLLFEAGNDVVTQVANRRINWQSYKIDPKRDRIGVFVSIVSTKIPFKGTGKEYIGDDTEAIRKSVKSALQRCCKQLKQHLLTRNAARDVKERKRSLLRYMPDVSRAIAAVLNSINKRKRIVNSEN 585
BLAST of mRNA_P-littoralis_Contig154.63.1 vs. uniprot
Match: A0A7S2XJE4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJE4_9STRA) HSP 1 Score: 635 bits (1638), Expect = 2.900e-217 Identity = 342/619 (55.25%), Postives = 427/619 (68.98%), Query Frame = 1
Query: 46 GKAKGEVVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPLIALAIEEFTEAEFNEHRGM----------DNRD-VVDAGLFTASGRKKSTSKAAKAASTPSAAIEGASADSXXXXXXXXXXXXXXXXXXXXAVPDTKEKKGRSKGDCLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVISGCSKDLKDTPG-FLTKCVLDIDIYKNRPSVHEHVKLPNPEG--WRGTEITVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPSLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLTKDLSSIDRPLSERIIAEL-----GEGFRPKMAPSELTVKMISRLTQMLKDVKRFKPPDGACLSPAGEYNLRLGIIKEMQPLYVATYSEKPAVLEGHPFIVEAGVSLGGAEVKEGVNVYRFANRIPLLFEAGSDVVTRVATKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKRALQQCCLQLKAHLLRRNALRDQKERKKVLTKYIPDVSRAVFGLLTAMQKRARDTEEENDG 1845
G + EV SKSPAEFFA+NQ IAGFDN GKSLYTT+REL+ENSLDA ES+ LP I++ IEE T+++FN+ RG+ DN D + D LF K+ + A+ P+ + GA + V TK+K R Y+ + +DNG GM H+ IP++LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI + + + + TPG F++KCVLDIDIYKNRP V EH K PN W GTE V ++GNW TYKSRV+QYLQQLAIITPYA LEL Y N ++ K+ Y RRSEQMP + EVKHHP SVNNLL+QQL+ R++CK + FL +LSSI L++R+IAEL F M+P+++T K I+ L QML+ V+ FK PDG+CLSP GEYNL LGI K ++P +AT ++P+ EGHPFIVEA VSLGG++ KEG+N+ RFANRIPLLFE G+DV TRVA +I WS YK+DHKRDKI VFVS VSTK+PFKGT KEYIGDD EI+ +VKRALQ CC QL+AHL +RNALRD++ER+ L KY PDVSR++FG+L M+KR EE+ DG
Sbjct: 12 GNYREEVQVSKSPAEFFAENQAIAGFDNMGKSLYTTLRELIENSLDACESVNVLPNISVTIEEMTQSQFNKVRGLKTSSSAENGFDNDDGIKDIDLFMKKSNKRKSKSTGGASEAPTDPVSGAPEE----------------------VGSTKKK--RKANAEAYFHITVRDNGCGMSHEAIPNLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPITITTAHMNNDQGTPGEFISKCVLDIDIYKNRPRVIEHSKQPNNSDSPWIGTEFQVLIAGNWTTYKSRVVQYLQQLAIITPYAMLELNYTNASDAKRSFGIRYERRSEQMPPPSKEVKHHPSSVNNLLIQQLLERSRCKTFLKFLCTELSSISPSLAKRLIAELKGTQSDAEFDEDMSPADVTDKQITILVQMLRSVELFKAPDGSCLSPLGEYNLNLGIQKVIEPDLIATARDRPSAYEGHPFIVEAAVSLGGSDAKEGINIVRFANRIPLLFEGGADVATRVAQSKIKWSLYKIDHKRDKINVFVSIVSTKVPFKGTGKEYIGDDITEIQTSVKRALQSCCQQLRAHLTKRNALRDERERRSRLVKYAPDVSRSIFGILEVMRKRK---EEDVDG 603
BLAST of mRNA_P-littoralis_Contig154.63.1 vs. uniprot
Match: A0A6V2BFB6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BFB6_9STRA) HSP 1 Score: 631 bits (1627), Expect = 1.120e-215 Identity = 353/680 (51.91%), Postives = 442/680 (65.00%), Query Frame = 1
Query: 46 GKAKGEVVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPLIALAIEEFTEAEFNEHRGMDNRDVV------------DAGLFTASGRKKSTSKAAKAASTPSAAIEGASADSXXXXXXXXXXXXXXXXXXXXAVPDTKEKKGRSKGDCLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVIS---GCSKDLKDTPGF-------LTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEITVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPSLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLTKDLSSIDRPLSERIIAELGEGFRPKMAPSELTVKMISRLTQMLKDVKRFKPPDGACLSPAGEYNLRLGIIKEMQPLYVATYSEKPAVLEGHPFIVEAGVSLGGAEVKEGVNVYRFANRIPLLFEAGSDVVTRVATKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKRALQQCCLQLKAHLLRRNALRDQKERKKVLTKYIPDVSRAVFGLLTAMQKRARDTEEENDGEVSKRAKGGGSRSGGATMSSAS-----KARIMSSLDRKQVTEKTLALGLSAAVNQHDA 2004
G + EV +SKSPAEFFA+NQ IAGFDN GKSLYTT+REL+ENSLDA ES+ LP I L IEE ++++FN RG+ + + D+ T + +KS++K + E K ++ Y+ + +DNG GM HD IP++LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI++ + G S + G ++ CVLDIDIYKNRP V EH K+PN EGW GT V ++GNW TYKSR++QYLQQLAIITPYA+LE+ Y N + KKD+ Y RRSEQMP A EVKHHP SVNNLLVQQL+ R+KCK ++ FL+ DLSS+ L++RII EL + M+P+++ K I+R+ Q+L+ +FK PDG+CLSP GEYNL LGI K ++P VAT ++P EGHPFIVEA VSLGG KEG+ V RFANRIPLLFEAG+DV TRVA +I WSSYK+DHKRDKIGVFVS VSTK+PFKGT KEYIGDD EI+ +VKRALQ CC QL+ HL +RNALRDQ+ER+ L KYIPDVSR++FG+L M+KR D E N G S K RS + S KA I+ L++ +TEK + L A+ H A
Sbjct: 28 GHDENEVQQSKSPAEFFAENQAIAGFDNMGKSLYTTVRELIENSLDACESVNVLPDIQLNIEEMSQSQFNVLRGVTVKKLGNNETGTNAPVPDDSDAMTTTQGQKSSNK-------------------------------------------SNETKKSNRSAESYFLISVRDNGCGMAHDAIPNLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPIKIKTSHFGASDHKRHESGDDNRFGQEISTCVLDIDIYKNRPRVIEHTKVPNKEGWVGTLFEVLIAGNWTTYKSRIVQYLQQLAIITPYAKLEMRYSNRFDAKKDMAIRYDRRSEQMPPPAREVKHHPSSVNNLLVQQLLERSKCKTILKFLSTDLSSVTPALAKRIIDELDDDLDESMSPADVNDKQITRIVQLLRGSDQFKSPDGSCLSPLGEYNLNLGIRKVIEPEVVATARDRPGAYEGHPFIVEAAVSLGGKGAKEGITVVRFANRIPLLFEAGADVATRVAQSKIKWSSYKIDHKRDKIGVFVSIVSTKVPFKGTGKEYIGDDITEIQLSVKRALQSCCQQLRTHLAKRNALRDQRERRSRLVKYIPDVSRSIFGILDTMRKRKLD--EMNGGSTSLSPKKRLGRSQNTPIRSEDDVDKKKAGIIEKLEKDIITEKIIESHLLDAIESHGA 662
BLAST of mRNA_P-littoralis_Contig154.63.1 vs. uniprot
Match: A0A1E7FFR2_9STRA (Topo-VIb_trans-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFR2_9STRA) HSP 1 Score: 623 bits (1606), Expect = 7.470e-213 Identity = 323/591 (54.65%), Postives = 414/591 (70.05%), Query Frame = 1
Query: 46 GKAKGEVVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPLIALAIEEFTEAEFNEHRGMDNRDVVDAGLFTASGRK-KSTSKAAKAASTPSAAIEGASADSXXXXXXXXXXXXXXXXXXXXAVPDTKEKKGRSKGDCLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVISGCSKDLKDTPGFLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEITVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPSLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLTKDLSSIDRPLSERIIAELGEGFRPKMAPSELTVKMISRLTQMLKDVKRFKPPDGACLSPAGEYNLRLGIIKEMQPLYVATYSEKPAVLEGHPFIVEAGVSLGGAEVKEGVNVYRFANRIPLLFEAGSDVVTRVATKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKRALQQCCLQLKAHLLRRNALRDQKERKKVLTKYIPDVSRAVFGLLTAMQKR 1815
G+ +GE+ + KSPAEFFADNQ IAGFDN GKSLYT+IRELVENSLDA ESIG LP I + IEE + EFN+ RG+ D LF G K S++ A +A A + G+ + T KK +G Y+++K KDNG GM H+KIPD+LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI++ + S + CVLDI+I N P++ +H K N W GTE+ + ++GNW TY+SR++ Y QQLAIITPY QLEL Y N + P++++T + RRSEQMP L E+KHHP SVNN++V QLI R+ CK ++ FLTK+LS + RPL++RI+ E G + PS++T + +++L Q+L+ VK FK PDG+CLSP GEYNL LGI K ++P +VAT +KP+ EGHPF+VEA VSLGG E K+G+NV RFANRIPLLFE G+DV TRVA +I WS YK+D KRD+IGVFVS VSTKIP+KGT KEYIGDD EI +VK+A+Q CC QL+ HLL+RNALR+QK+R+ L KYIPDVSR+++ LL M+KR
Sbjct: 11 GEGRGEIQRQKSPAEFFADNQAIAGFDNYGKSLYTSIRELVENSLDACESIGVLPTIQVYIEELNQDEFNKIRGISVA-TKDVELFQQKGGKGNSSAGAVSSAKKKKAGVNGSGGNDKDSKPTK-----------------TPRKKASQEG---YFQLKVKDNGCGMNHEKIPDLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPIKITTAHSVSI---------CVLDINITNNCPNIIQHTKSKNTTEWVGTELELLIAGNWTTYRSRIVSYFQQLAIITPYCQLELVYENRSEPQRNMTLRHDRRSEQMPPLPREIKHHPSSVNNIIVSQLIERSNCKTIIDFLTKELSCVTRPLAQRIVTECGWDEDDIVNPSDMTSRQLTKLVQVLRTVKMFKAPDGSCLSPLGEYNLNLGIRKVLEPEFVATARDKPSAYEGHPFLVEAAVSLGGKEAKDGLNVVRFANRIPLLFEGGADVCTRVANNKIKWSLYKIDQKRDRIGVFVSIVSTKIPYKGTGKEYIGDDITEISVSVKKAIQSCCQQLRVHLLKRNALRNQKDRRSKLVKYIPDVSRSLYTLLDGMRKR 571
BLAST of mRNA_P-littoralis_Contig154.63.1 vs. uniprot
Match: B8BZH3_THAPS (Topoisomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZH3_THAPS) HSP 1 Score: 613 bits (1580), Expect = 1.020e-209 Identity = 349/588 (59.35%), Postives = 416/588 (70.75%), Query Frame = 1
Query: 55 KGEVVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPLIALAIEEFTEAEFNEHRGMDNRDVVDAGLFTASGRKKSTSKAAKAASTPSAAIEGASADSXXXXXXXXXXXXXXXXXXXXAVPDTKEKKGRSKGDCLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVISGCSKDLKDTPGFLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEITVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPSLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLTKDLSSIDRPLSERIIAELGEGFRPKMAPSELTVKMISRLTQMLKDVKR-FKPPDGACLSPAGEYNLRLGIIKEMQPLYVATYSEKPAVLEGHPFIVEAGVSLGGAEVKEGVNVYRFANRIPLLFEAGSDVVTRVATKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKRALQQCCLQLKAHLLRRNALRDQKERKKVLTKYIPDVSRAVFGLLTAMQKR 1815
K E+ +SKSPAEFFA+NQ+IAGFDN GKSLYTT+RELVENSLDA ES+ LP I++ IEE T+ +FNE RG+ G+KK ++G S D+ XXXXXXXXXXXXXXXA KK R+ GD Y+ V +DNG GM HD IPD+LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI++ + K + IDIYKN P + EH + N E W GTE+ V VSGNW TYKSRV+QYLQQLAIITPYA+LE+ Y N ++ KK + + RRSEQMPS A EVKHHP SVNNLLVQQL+ +K K L+ FLT DLS I +++R+I LG+ F M+P+E+ K I+RL Q+L+ FK PDG CLSP GEYNL LGI K ++P +AT +KP +GHPFIVEA VSLGG E KEG+ V RFANRIPLLFE G+DV TRVA +I WSSYK+DHKRDKIGVFVS VSTK+PFKGT KEYIGDD EI+ +VKRALQ CC QL+ HL +RNALRD KERK L KYIPDVSR++FG+L M KR
Sbjct: 10 KDEIQQSKSPAEFFAENQSIAGFDNPGKSLYTTLRELVENSLDACESVDVLPDISVVIEEMTQDQFNEMRGVPTSGGP--------GKKKK-------------GVDG-SDDAAVGDAXXXXXXXXXXXXXXXA------KKRRAGGDA-YFLVTVRDNGCGMAHDAIPDLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPIRIKTSHVKG-----------IYIIDIYKNCPRIIEHKQKDNTENWIGTEMQVLVSGNWTTYKSRVVQYLQQLAIITPYARLEMSYSNRSDEKKGMNLRFERRSEQMPSQAREVKHHPSSVNNLLVQQLLENSKSKTLLKFLTGDLSGISPSVAKRLIERLGDAFEEDMSPAEMDDKQITRLVQLLRSTDDLFKSPDGGCLSPLGEYNLNLGIQKVVEPEIIATARDKPGAYDGHPFIVEAAVSLGGKEAKEGITVVRFANRIPLLFEGGADVATRVANSKIKWSSYKIDHKRDKIGVFVSIVSTKVPFKGTGKEYIGDDITEIQLSVKRALQNCCQQLRVHLAKRNALRDVKERKSRLLKYIPDVSRSLFGILEGMHKR 557
BLAST of mRNA_P-littoralis_Contig154.63.1 vs. uniprot
Match: A0A7S2S2M8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M8_9STRA) HSP 1 Score: 613 bits (1582), Expect = 1.100e-208 Identity = 339/612 (55.39%), Postives = 425/612 (69.44%), Query Frame = 1
Query: 55 KGEVVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPLIALAIEEFTEAEFNEHRGMDNR-DVVDAGLFTASGRKKSTSKAAKAASTPSAAIEGASADSXXXXXXXXXXXXXXXXXXXXAVPDTKEKKGRSKGDCLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVISGCSKDLKDTPGFLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEITVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNH---------------------ANPKKDLTAVYRRRSEQMPSLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLTKDLSSIDRPLSERIIAELGEGFRPKMAPSELTV--KMISRLTQMLKDVKRFKPPDGACLSPAGEYNLRLGIIKEMQPLYVATYSEKPAVL-EGHPFIVEAGVSLGGAEVKEGVNVYRFANRIPLLFEAGSDVVTRVATKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKRALQQCCLQLKAHLLRRNALRDQKERKKVLTKYIPDVSRAVFGLLTAMQKR 1815
+GE V+SKSPAEFFA+NQ IAGFDN GKSLYT+IRELVENSLDAAES+ LP I L I E +EA+FN RG+ + D LF +S +K SK+ + S A D XXXXXXXXX S+ +YYRV CKDNG GMPH IP+MLG VLS SKYGVRQ RGK+G+GAKMALIW+KKSTGLPI+V S +KD + P +++CVLDIDI++N P V H K NP+GWRGTEITV V GNW +Y+S+V+ Y QQLA+ITPYA L+L++++ ++ ++L Y RRS+Q+P L EVKHHP SV+NLL+QQL+ RTK K LV FL +DL + ++ER+ AELG+ + P ++ K ++ +TQ+L+DV FK PDG+CLSPAGEYNLRLGI KE+ P VAT++ K A EGH F+VEAGVS+GG++ KEG+ VYRFANRIPLLFE GSDV TRVA K+I W+SYK+D K+D+IGVFVS VSTKIPFKGTSKEYIG+D E + +AVK+ LQ C QL+ HL+RR RD + RKK LTKYIPDVSR++FG+L + R
Sbjct: 4 RGESVRSKSPAEFFAENQIIAGFDNPGKSLYTSIRELVENSLDAAESLCVLPDIELTITELSEAQFNAQRGVKTAGNRGDLELFGSSTKKGKGSKSKEGGSVE------AQDDGVEEGADLSQSLXXXXXXXXXXXXXXXXXXAGSRSQVMYYRVTCKDNGCGMPHQAIPEMLGRVLSGSKYGVRQTRGKFGLGAKMALIWAKKSTGLPIEVRSAHTKDASEPPRSVSECVLDIDIHRNEPQVQRHTKQANPDGWRGTEITVTVGGNWTSYRSKVVSYFQQLAVITPYADLKLKFNSEGSSADGSTPLSPGLGVTESSTSSSARNLEVHYSRRSDQIPPLPSEVKHHPSSVDNLLIQQLLVRTKSKSLVSFLQRDLQGVTSGVAERVAAELGDWAEDTL-PQDIATNNKRVNAITQVLRDVTLFKSPDGSCLSPAGEYNLRLGIQKEVAPDLVATHTMKRAAAHEGHSFLVEAGVSIGGSKAKEGITVYRFANRIPLLFEQGSDVTTRVANKKIKWASYKIDQKKDRIGVFVSIVSTKIPFKGTSKEYIGEDVEPLHEAVKKCLQACATQLRHHLMRREQQRDAQNRKKNLTKYIPDVSRSLFGVLNRVYTR 608
BLAST of mRNA_P-littoralis_Contig154.63.1 vs. uniprot
Match: K0RAA8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAA8_THAOC) HSP 1 Score: 599 bits (1544), Expect = 5.660e-204 Identity = 332/604 (54.97%), Postives = 396/604 (65.56%), Query Frame = 1
Query: 46 GKAKGEVVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPLIALAIEEFTEAEFNEHRGMDN--RDVVDAGLFTASGRKKSTSKAAKAASTPSAAIEGASADSXXXXXXXXXXXXXXXXXXXXAVPDTKEKKGRSKGDCLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVIS--------GCSKDLKDTPGFLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEITVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPSLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLTKDLSSIDRPLSERIIAELGEGFRPKMAPSELTVKMISRLTQMLKDVKR-FKPPDGACLSPAGEYNLRLGIIKEMQPLYVATYSEKPAVLEGHPFIVEAGVSLGGAEVKEGVNVYRFANRIPLLFEAGSDVVTRVATKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKRALQQCCLQLKAHLLRRNALRDQKERKKVLTKYIPDVSRAVFGLLTAMQKRARD 1824
G K EV +SKSPAEFFA+NQ+IAGFDNAGKSLYTT+REL+ENSLDA ES+ LP I++ IEE TEA+FN+ RG+ N + DA + EKK R+ GD Y+ V +DNG GM HD IPD+LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI+V S G +L D G DIYKN P V EH + N + W GTEI V V+GNW TYKSRV+QYL QLAIITPYA+LE+ Y N + KK+ + RRS+ MP+ A EVKHHP SVNNLL+QQL+ RT K L+ FLT DLS I ++++I LG+ F M+P EL K I+RL Q+L+ FK PDG CLSP GEYNL LGI K ++P +AT EKP +GHPFIVEA VSLGG KEG+ V RFANRIPLLFE G+DV TRVA +I WSSYK+DHKR+KI VFVS VSTK+PFKGT KEYIGDD I+ +VK+ALQ CC QL+AHL +RNALRD KERK L KYIPDVSR++FG+L M+KR D
Sbjct: 13 GSKKDEVQQSKSPAEFFAENQSIAGFDNAGKSLYTTLRELIENSLDACESVNVLPDISVKIEEMTEAQFNKSRGVPNSQEEKRDAEI---------------------------------------------------------EKKKRAGGDA-YFTVTVRDNGCGMAHDAIPDLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPIRVKSSHVKGVRGGGGGNLLDDEGTRKIGPKPSDIYKNCPRVLEHKQKTNSDEWIGTEIQVQVAGNWTTYKSRVVQYLHQLAIITPYARLEMAYTNQTDAKKNFDLNFDRRSDNMPAQAREVKHHPTSVNNLLIQQLLERTNSKSLLKFLTNDLSGITSSAAKKLIERLGDSFDADMSPEELDDKQITRLVQVLRKTDDLFKNPDGGCLSPLGEYNLNLGIQKVIEPDVIATAREKPGSYDGHPFIVEAAVSLGGNNAKEGITVVRFANRIPLLFETGADVATRVANSKIKWSSYKIDHKREKITVFVSIVSTKVPFKGTGKEYIGDDIVPIQASVKKALQTCCQQLRAHLAKRNALRDVKERKSKLLKYIPDVSRSLFGILDGMRKRKLD 558
BLAST of mRNA_P-littoralis_Contig154.63.1 vs. uniprot
Match: B7G6Z7_PHATC (Type II DNA topoisomerase 6 subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6Z7_PHATC) HSP 1 Score: 597 bits (1540), Expect = 3.280e-203 Identity = 318/588 (54.08%), Postives = 404/588 (68.71%), Query Frame = 1
Query: 58 GEVVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPLIALAIEEFTEAEFNEHRGMDN--RDVVDAGLFTASGRKKSTSKAAKAASTPSAAIEGASADSXXXXXXXXXXXXXXXXXXXXAVPDTKEKKGRSKGDCLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVISGCSKDLKDTPGFLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEITVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPSLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLTKDLSSIDRPLSERIIAELGEGFRPKMAPSELTVKMISRLTQMLKDVKRFKPPDGACLSPAGEYNLRLGIIKEMQPLYVATYSEKPAVLEGHPFIVEAGVSLGGAEVKEGVNVYRFANRIPLLFEAGSDVVTRVATKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKRALQQCCLQLKAHLLRRNALRDQKERKKVLTKYIPDVSRAVFGLLTAMQKR 1815
GEV KSPAEFFA+NQ IAGFDN GKSLYT++RELVENSLDA ESI LP I++ I+E+T+ EFN M R D LF + K K E D V ++ +K+ ++ D Y+++ KDNG GM H IP++LG VLS SKYGVRQ RGK+G+GAKMALIW+KKSTG PI++++ D P + CVLDIDIYKN P + EH N +GW GTE++V ++GNW TYKSR++QYLQQLAIITPYA LEL Y N ++ K++L Y RRS+QMP A +KHHP SVNNL++QQLI TK + L FL+ +LS++ PL+ R++ ELG F M PS L K I+RL Q+L+ V+ FK PDG+CLSP GEYNL LGI K ++P +AT +KP EGHPF+VEA VSLGG EVKEG+ V RFANRIPLLFE G+DV TRVA +I WS+YK+D+KRD+IGVFVS VSTK+PFKGTSKEYIGDD EI+++VKRALQ CC QL+ +L +R+AL+D + RK + KY+PDV R++FG+L +M+ R
Sbjct: 14 GEVQVQKSPAEFFAENQAIAGFDNLGKSLYTSLRELVENSLDACESIHELPEISIEIKEYTQEEFNALDVMKTSPRKKRDMQLFETKKKDKKPPK------------EATDVDEIT------------------TVENSGKKRKKAPQDA-YFKLTVKDNGCGMSHSAIPNLLGRVLSGSKYGVRQTRGKFGLGAKMALIWAKKSTGQPIRIMTSHRPDGGVAPERASACVLDIDIYKNAPRILEHTTRKNTDGWMGTEMSVLIAGNWTTYKSRIVQYLQQLAIITPYAVLELAYINISDSKRNLHVRYDRRSDQMPPPAKTIKHHPASVNNLVIQQLIQFTKTRTLFKFLSTELSTVSPPLARRLVTELG--FDESMPPSSLEDKEITRLVQLLRQVQLFKAPDGSCLSPLGEYNLNLGIRKVLEPDLIATSRDKPGAYEGHPFLVEAAVSLGGKEVKEGITVIRFANRIPLLFEGGADVATRVANTKIRWSNYKMDYKRDRIGVFVSIVSTKVPFKGTSKEYIGDDATEIQQSVKRALQSCCQQLRGYLAKRSALKDAQTRKSRMAKYVPDVGRSLFGILDSMRAR 568
BLAST of mRNA_P-littoralis_Contig154.63.1 vs. uniprot
Match: A0A7S3LRB3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRB3_9STRA) HSP 1 Score: 595 bits (1533), Expect = 7.220e-202 Identity = 332/676 (49.11%), Postives = 434/676 (64.20%), Query Frame = 1
Query: 67 VKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPLIALAIEEFTEAEFNEHRGMDNRDVVDAGLFTASGRKKSTSKAAKAASTPSAAIEGASADSXXXXXXXXXXXXXXXXXXXXAVPDTKEKKGRSKGDCLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVISGCSKDLKDTPGFLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEITVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPSLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLTKDLSSIDRPLSERIIAEL----GEGFRPKMAPSELTVKMISRLTQMLKDVKRFKPPDGACLSPAGEYNLRLGIIKEMQPLYVATYSEKPAVLEGHPFIVEAGVSLGGAEVKEGVNVYRFANRIPLLFEAGSDVVTRVATKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKRALQQCCLQLKAHLLRRNALRDQKERKKVLTKYIPDVSRAVFGLLTAMQK----RARDTEEENDGEVSKRAKGGGSRSGGATMSSASKARIMSSLDRKQVTEKTLALGLSAAVNQHDAEAAKEETAAAGRGTHARQDIII 2070
+K KSPAEFFA+NQNIAGFDN GK+LYTT+RELVENSLDAAESI LP + L I E + F++ +G+ +D VD L+ G+KK XXXXXXXXXX +S+G Y+++ CKDNG GM H++IPDM G VL+ SKYGV+QARGK+G+GAKMALIWSKKSTGLPI++ S + + ++ F+T C+LDIDI+KN P++ H K+PN E W G+E+ V +SGNW TYKSRVL Y++ LA+ITPYA LE+ NPKK T YRRRSEQM LA EVKHHP SV+NL+V+QL++ TK K L L DL I++PL++R+I EL + F S + + + +LT ML D F PPD CLSPAGEYNLRLGI+K+ QP VATY+ KP GHPF+VEA V+ GGA+ K G+ +YRFANRIPLLFE G+D+V A +R+ WSSYK++HK DK+GVFVS VSTKIPFKGT KEYIGDD E+ ++VK A+ +CCLQLK+ L R RD R + L KY+PD SRA+FG+L+AM++ + DG + K K ++S + +VT+ +++ L A+ Q D A E+ GRG +R ++ +
Sbjct: 28 LKFKSPAEFFAENQNIAGFDNPGKALYTTVRELVENSLDAAESIRTLPEVHLKITELSNKSFSQAQGLSVQDRVDKALYR--GKKKGKKX-----------------------------XXXXXXXXXXXXXXXXXANSKSQGSQKYFKLVCKDNGCGMKHERIPDMFGRVLAGSKYGVKQARGKFGLGAKMALIWSKKSTGLPIEIKSSHTNNPDESSDFITHCILDIDIHKNEPNIRVHEKVPNDEAWHGSEVAVTISGNWKTYKSRVLNYMELLAVITPYAHFTLEFICEDNPKKSFTMDYRRRSEQMCKLAKEVKHHPKSVDNLIVRQLLNMTKKKTLEQCLCSDLQGINKPLAKRLIDELEQLTDQNFDRDTLCSRIDTRTVQQLTAMLNDTNVFAPPDSRCLSPAGEYNLRLGIMKQFQPDLVATYTSKPGSYNGHPFVVEAAVAFGGAKGKPGLTIYRFANRIPLLFEPGNDIVNIAANRRVKWSSYKINHKTDKVGVFVSIVSTKIPFKGTGKEYIGDDVTEMAESVKTAISRCCLQLKSKLTARRLERDHAARARNLAKYVPDCSRALFGVLSAMKEGYEANGAKRRKVEDGVIDK-----------------VKTEMISKMSSGEVTQASISSKLIEAIEQADHAMALEQATKRGRGQASRCNVHL 655 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig154.63.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig154.63.1 >prot_P-littoralis_Contig154.63.1 ID=prot_P-littoralis_Contig154.63.1|Name=mRNA_P-littoralis_Contig154.63.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=713bp CTARFIPAVQQYDNMGKAKGEVVKSKSPAEFFADNQNIAGFDNAGKSLYTback to top mRNA from alignment at P-littoralis_Contig154:179669..201268- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig154.63.1 ID=mRNA_P-littoralis_Contig154.63.1|Name=mRNA_P-littoralis_Contig154.63.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=21600bp|location=Sequence derived from alignment at P-littoralis_Contig154:179669..201268- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig154:179669..201268- >mRNA_P-littoralis_Contig154.63.1 ID=mRNA_P-littoralis_Contig154.63.1|Name=mRNA_P-littoralis_Contig154.63.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2139bp|location=Sequence derived from alignment at P-littoralis_Contig154:179669..201268- (Pylaiella littoralis U1_48)back to top |