mRNA_P-littoralis_Contig154.10.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig154.10.3 vs. uniprot
Match: D7FS55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS55_ECTSI) HSP 1 Score: 472 bits (1215), Expect = 6.760e-165 Identity = 226/278 (81.29%), Postives = 251/278 (90.29%), Query Frame = 1
Query: 169 MSFFNSMFPEKPVARAVSVAALAAAGCVGLFFAADSGALVSWGLPYLKPWQALTLVSFGINTLAVSSGGRIDGPEPDNPEDAQLPLVRYFMPAGWAFAIWGPIFLGETALAAYQALPLDSVAAATGWLTRLSPWLASAFLVQSCWCLSFREWARDAGLLWFPAALLGGTAVCLGGAHHVVRGALAAGSMSTLQYGLVHLPVSLHFGWVSCASLVNFNNYIATLAYSDKKKLNFSLASVVAAVGLGVAVTGSTGDPVYAGVVAWALSAVASEKGWGRMK 1002
MSF + PEKPV RAVSV ALA AGC GL+FAA+SGALVSW LPY+KPWQ LTL S+ INT AVS+GGR+DGPEP++P+DA+LPLVRYFMPAGWAF+IWGPIFLGE ALA YQ LPL+ V+AA GWL++LSPWL+SAFLVQSCWCLSFREWARD+GLLWFPAALLGGTA CLGGAHHVVRGALAAG MS LQYGLVHLPVSLHFGWVSCA+LVNFNNYI+ L +SDK KLNFSLAS+ +AVGL VAVTG+TGDPVYAGVVAWALSAVASEKGW +MK
Sbjct: 1 MSFLQGIIPEKPVQRAVSVTALAIAGCGGLYFAAESGALVSWSLPYVKPWQVLTLTSWAINTAAVSAGGRLDGPEPEDPKDAKLPLVRYFMPAGWAFSIWGPIFLGEAALAVYQTLPLEGVSAAAGWLSKLSPWLSSAFLVQSCWCLSFREWARDSGLLWFPAALLGGTAACLGGAHHVVRGALAAGEMSNLQYGLVHLPVSLHFGWVSCATLVNFNNYISLLPFSDKGKLNFSLASIASAVGLAVAVTGTTGDPVYAGVVAWALSAVASEKGWAKMK 278
BLAST of mRNA_P-littoralis_Contig154.10.3 vs. uniprot
Match: D8LCC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC2_ECTSI) HSP 1 Score: 251 bits (641), Expect = 2.370e-74 Identity = 131/280 (46.79%), Postives = 171/280 (61.07%), Query Frame = 1
Query: 181 NSMFPEKPVARAVSVAALAAAGCVGLFFAADSGAL-VSWGLPYLKPWQALTLVSFGINTLAVSSGGRIDGPEPDNPEDAQLPLVRYFMPAGWAFAIWGPIFLGETALAAYQALPLDSVAAATGWLTRLSPWLASAFLVQSCWCLSFREWARDAGLLWFPAALLGGTAVCLGGAHHVVRGALAAGSMSTLQYGLVHLPVSLHFGWVSCASLVNFNNYIATL-AYSDKKKLNFSLASVVAAVGLGVAVTGSTGDPVYAGVVAWALSAVASEKGWGRMKSTVD 1014
+ P+ R++ + +AA G GL + L +W + + PWQ L ++ +N A GGR+DG + VR+ PAGWAFAIWGPIF GE A+Q +PL S+ + WL+ +SPW A A L Q+ WC SFR WARD+GLLW PA LLGGT V LGG H ++R A M+ LQY VH+P+SLH GW+SCA+LVN N Y AT+ S++ KL +L SVVAAV LGVA+T DP+YA VVAWAL AV S GW ++ V+
Sbjct: 264 GKLVPDNAYLRSLLIIVIAALGSGGLHALTTNNLLRAAWPITLVDPWQVLAASAWALNMRATFGGGRLDGIGQSGSSGTRP--VRFLSPAGWAFAIWGPIFFGEAIYVAFQLMPLPSIRG-SWWLSDISPWFAGAMLFQALWCFSFRPWARDSGLLWLPALLLGGTGVALGGVHRILREAWFTSDMTVLQYLAVHVPLSLHLGWISCATLVNLNGYFATINKLSNRVKLGLALGSVVAAVALGVAITLLREDPIYAAVVAWALWAVGSPAGWDELRGRVE 540
BLAST of mRNA_P-littoralis_Contig154.10.3 vs. uniprot
Match: A0A835Z9R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9R9_9STRA) HSP 1 Score: 218 bits (556), Expect = 6.910e-65 Identity = 123/271 (45.39%), Postives = 162/271 (59.78%), Query Frame = 1
Query: 217 VSVAALAAAGCVGLFFAADSGALVSWGLPYLKPWQALTLVSFGINTLAVSSGGRIDGPEPDNPEDAQLPLVRYFMPAGWAFAIWGPIFLGETALAAYQALPLDSVAAATGWLTRLSPWLASAFLVQSCWCLSFREWARDAGL--LWFPAALLGGTAVCLGGAHHVVRGALAAGSMSTLQYGLVHLPVSLHFGWVSCASLVNFNNYIATLA-YSDKKKLNFSLASVVAAVGLGVAVTGSTGDPVYAGVVAWALSAVASEKGWGRMKSTVDET 1020
++ AA AGC L A + W Y +PWQ L V++ +N AV GR+DG + Q RYF PAGWAFAIW PIF GE YQALPL V + WL LSP+ + A L+Q+ WC +FR WAR AGL W PA LLG A LGGAH ++ AL +S L Y L +P++LHFGW++ A+LVN N ++A A S K + ++AS+ AV +G AVT + DP+YA V+AWAL+A+A E WG+++ VDET
Sbjct: 7 LTAAAAIVAGCRNL--KATNALTTPWNFRYAEPWQVLNAVTYLLNFAAVRVPGRLDGRQWSQDAATQQ---RYFAPAGWAFAIWAPIFAGELLFVIYQALPLARVRT-SWWLAELSPYFSGAMLLQTLWCGAFRPWARAAGLNLQWIPALLLGLGAAALGGAHGILVQALEDSELSPLSYALAFVPLALHFGWLTAAALVNANGFVAAAAPRSHAVKASAAIASIYLAVLVGAAVTFARRDPIYAAVIAWALAAIADEAAWGKLRGQVDET 271
BLAST of mRNA_P-littoralis_Contig154.10.3 vs. uniprot
Match: A0A7S2UXB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB1_9STRA) HSP 1 Score: 207 bits (526), Expect = 2.670e-60 Identity = 112/244 (45.90%), Postives = 160/244 (65.57%), Query Frame = 1
Query: 280 ALVSWGLPYLKPWQALTLVSFGINTLAVSSGGRIDGPEPDNPEDAQLPLVRYFMPAGWAFAIWGPIFLGETALAAYQALPLDSVAAATGWLTRLSPWLASAFLVQSCWCLSFREWARDAGLLWFPAALLGGTAVCLGGAHHVVRGALAAGSMSTLQYGLVHLPVSLHFGWVSCASLVNFNNYIATLAYSDKKKLNFSLASVVAAVGLGVAVTGSTGDPVYAGVVAWALSAVASEKGWGRMKSTV 1011
A +SW LP+ +PWQ L ++++ +N AVS GR+DG + D +R+F PAGWAFAIWGPIFLGE A +Q LP+++V T ++ +L+ W A QS WC +FR WA+ +G LW PAALL TAV LGGAH V+ AL + +S L+Y +V++P++LHFGW++ ASLV++N Y+A++ S K S AS+VA V V + +P Y VV+WAL+AVA +KGW +++ V
Sbjct: 48 ASISW-LPF-RPWQILNILAWALNMWAVSVPGRLDGSQAAALSDEGE--IRFFTPAGWAFAIWGPIFLGEALFAFFQLLPIETVQ--TSFIPKLTVWWIPAVACQSLWCSAFRPWAKKSGFLWLPAALLTLTAVALGGAHKVLFDALHSEEVSMLEYIIVNIPLTLHFGWITAASLVSWNGYLASVTASISIKSLASSASIVAGVIAAALVGWNRIEPFYPLVVSWALAAVADKKGWSQLEGKV 285
BLAST of mRNA_P-littoralis_Contig154.10.3 vs. uniprot
Match: A0A4D9D883_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D883_9STRA) HSP 1 Score: 174 bits (441), Expect = 8.860e-47 Identity = 108/224 (48.21%), Postives = 138/224 (61.61%), Query Frame = 1
Query: 319 QALTLVSFGINTLAVSSGGRIDGPEPDNPEDAQLPLVRYFMPAGWAFAIWGPIFLGETALAAYQALPLDSVAAATGWLTRLSPWLASAFLVQSCWCLSFREWARDAGLLWFPAALLGGTAVCLGGAHHVVRGALAAGSMSTLQYGLVHLPVSLHFGWVSCASLVNFNNYIA---TLAYSDKKKLNFSLASVVAAVGLGVAVTGSTGDPVYAGVVAWALSAVASE 981
Q L L+++ N +AV GR DG + +DA VR+F P+ +AFAIW PIFLGE L YQ A +L RL+P LA AF QS WC++FR W + + P+ALL TAV L H V+R A+AAG+M Y +VHLP+SLHFGW++CA+LVN N + A TL DK L +LAS+ AV LG VT ++GDPV A VVAWAL AVA +
Sbjct: 117 QVLILLAWLTNKIAVRIPGRSDG---KSWKDAMSSPVRFFTPSAYAFAIWAPIFLGEFLLTFYQLASSRLAPALQPYLARLAPPLAQAFAAQSLWCVAFRPWVGR--MQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDK--LGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHD 333
BLAST of mRNA_P-littoralis_Contig154.10.3 vs. uniprot
Match: A0A7R9XV25_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9XV25_MICPS) HSP 1 Score: 163 bits (412), Expect = 3.150e-43 Identity = 97/247 (39.27%), Postives = 138/247 (55.87%), Query Frame = 1
Query: 307 LKPWQALTLVSFGINTLAVSSGGRIDGP-------------EPDNPEDAQLPLVR------YFMPAGWAFAIWGPIFLGETALAAYQALPLDSVAAATGWL-TRLSPWLASAFLVQSCWCLSFREWARDAGLLWFPAALLGGTAVCLGGAHHVVRGALAAGSMSTLQYGLVHLPVSLHFGWVSCASLVNFNNYIATLAYSDKKKLNFSLASVVAAVGLGVAVTGSTGDPVYAGVVAWALSAVASEKG 987
++ WQ + SF +N ++VS GGR+DG E + +A + R F PAGWAFAIWG I+LGE+ A QA P S+A+++ L L+PW + +Q+ WC++FR WAR W ALL AV LG GA + S+ST ++ LP+ LHFGW++ A++VN N+ +A + +L+ + ASV A LGVAV TGD V+A +AWAL+AVAS+ G
Sbjct: 54 MRGWQLANVASFAVNVVSVSVGGRVDGEMAKEAKRAAKAKREGKSEAEAAAGVPRDSIYRSLFTPAGWAFAIWGVIYLGESVFVAAQASP--SLASSSRELYAALAPWWTISCGLQALWCVAFRPWARRPRHFWISGALLATEAVALGRVARCFVGASPSRSLSTTEFLAARLPLGLHFGWITAAAVVNLNSLVAVAGAAPHAQLSIAFASVWGAAALGVAVALGTGDAVFAATLAWALAAVASDGG 298
BLAST of mRNA_P-littoralis_Contig154.10.3 vs. uniprot
Match: A0A6V1K7Z9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7Z9_HETAK) HSP 1 Score: 162 bits (409), Expect = 2.140e-42 Identity = 103/284 (36.27%), Postives = 146/284 (51.41%), Query Frame = 1
Query: 181 NSMFPEKPVARAVSVAALAAAGCVGLFFA-----ADSGALVSWGLPYLKPWQALTLVSFGINTLAVSSGGRIDGPEPDNPEDAQLPLVRYFMPAGWAFAIWGPIFLGETALAAYQALPLDSVAAATGWLTRLSPWLASAFLVQSCWCLSFREWARDAGLLWFPAALLGGTAVCLGGAHHVVRGA--LAAGSMSTLQYGLVHLPVSLHFGWVSCASLVNFNNYIATLAYSDKKKLNFSLASVVAAVGLGVAVTGSTGDPVYAGVVAWALSAVASEKGWGRMKSTV 1011
+ PE P A SV A+A + + + G ++ +P+ + WQ L F N A GR+D +P + + R+F PAGWAF IW PIF+GET YQALP++ + +L LSP+ +A QS W R WA + G W AALL T V L G H V+ G ++ L + + +P+SLHFGW+ A LV+ N +A + + K FS ASVV A +GV V DPV A ++WAL+ +A +K W ++KSTV
Sbjct: 49 KTALPEFPPAVYASVTVAASAALPSILYTFRDVITEQGKDIAPFVPFRR-WQVLNTFIFLFNRWAGKRPGRMDMKQPRAEASQKKEVARFFTPAGWAFRIWIPIFIGETIFVFYQALPINYIKN-KDFLAMLSPFWIAAIGFQSIWTFCARPWAVENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNGVLARTPLTIRAKHLFSDASVVVATVIGVVVAAKRTDPVVAFALSWALAGLADDKAWEKLKSTV 330
BLAST of mRNA_P-littoralis_Contig154.10.3 vs. uniprot
Match: A0A090N4T8_OSTTA (Unnamed product n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N4T8_OSTTA) HSP 1 Score: 158 bits (399), Expect = 1.250e-41 Identity = 106/275 (38.55%), Postives = 148/275 (53.82%), Query Frame = 1
Query: 226 AALAAAGCVGLFFAADSGA-----LVSWGLPYLKPWQALTLVSFGINTLAVSSGGRIDGPEPDNPEDAQ----------LPLVR----YFMPAGWAFAIWGPIFLGETALAAYQALPLDSVAAATGWLTRLSPWLASAFLVQSCWCLSFREWARDAGLLWFPAALLGGTAVCLGGAHHVVRGALAAGSMSTLQ--YGLVHLPVSLHFGWVSCASLVNFNNYIATLAYSDKKKLNFSLASVVAAVGLGVAVTGSTGDPVYAGVVAWALSAVASEKG 987
AAL AG GL A L + + +PW+ + +++G+N +VS+ GRIDG +A+ +PL F PAGWAFAIWG I+ GE A+ A+ L D AA +P+ A A +QS WC++FR WA+ W +ALL A LGGA +RG AGS+S + + +P+SLHFGW+SCA+LVN N+++A D + + F+ S A LG V+ +GD VY VVAWAL+AVAS+ G
Sbjct: 10 AALITAGAAGLVIGVAKIAPWITSLTANAIAGAQPWKVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGEMAMTAHALLGGDERVAAA------APYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALRG---AGSISPSEALFWTTRVPLSLHFGWISCAALVNVNSHVAKTCAIDTQ-IAFAFLSAFGASALGAGVSVFSGDAVYGAVVAWALAAVASDGG 274
BLAST of mRNA_P-littoralis_Contig154.10.3 vs. uniprot
Match: A0A7S0WI04_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WI04_9CHLO) HSP 1 Score: 157 bits (397), Expect = 5.720e-41 Identity = 102/248 (41.13%), Postives = 142/248 (57.26%), Query Frame = 1
Query: 286 VSWGLPYL---KPWQALTLVSFGINTLAVSSGGRIDGPEPDN----PEDAQLPLVRYFMPAGWAFAIWGPIFLGETALAAYQALPLDSVAAATGWLTRLSPWLASAFLVQSCWCLSFREWARDAGLLWFPAALLGGTAVCLGGAHHVVRG-ALAAGSMSTL-QYGLVHLPVSLHFGWVSCASLVNFNNYIATLAYSD-----KKKLNFSLASVVAAVGLGVAVTGSTGDPVYAGVVAWALSAVASEKG 987
+ W YL + WQ + +F N AVSSGGRID + P D LV P+GWAFAIWG I+L E+ Q LP S+ T WL +SPW +A + QS WC +FR+WAR +G+ W AALL TA+ L GA VV G ++ GS + + Q L +P+SLHFGWV+ ASLVN+N++ A L Y D + ++ + AS+ A +G V D +Y+ +AWAL+A+ ++KG
Sbjct: 62 IQWCFRYLAGLRVWQVVNAAAFCPNVWAVSSGGRIDSRYANTNGVPPSDEYRSLVT---PSGWAFAIWGVIYLTESIFTVVQLLP--SMTDVT-WLLDVSPWWVAANIYQSLWCAAFRDWARPSGVFWISAALLTATAIALAGAEAVVTGPSVGTGSWTAVGQRVLAQMPLSLHFGWVTAASLVNWNSFFAVL-YRDAHISLRTQIWLAFASLHLAYIVGSIVAVVRMDFLYSLTLAWALTAIKTDKG 302
BLAST of mRNA_P-littoralis_Contig154.10.3 vs. uniprot
Match: A0A7S0H0W2_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0H0W2_MICPS) HSP 1 Score: 155 bits (392), Expect = 2.530e-40 Identity = 107/291 (36.77%), Postives = 152/291 (52.23%), Query Frame = 1
Query: 208 ARAVSVAALAAAG---CVGLFFAADSGALVSWGLPYLKPWQALTLVSFGINTLAVSSGGRIDGP--------------------EPDNPEDAQLPLVRY----FMPAGWAFAIWGPIFLGETALAAYQALPL--DSVAAATGWLTRLSPWLASAFLVQSCWCLSFREWARDAGLLWFPAALLGGTAVCLGGAHH--VVRGALAAGSMSTLQYGLVHLPVSLHFGWVSCASLVNFNNYIATLAYSDKKKLNFSLASVVAAVGLGVAVTGSTGDPVYAGVVAWALSAVASEKG 987
AR +V A+ AA VGL A SG LVS +K WQ L++ +F +N +V GR+DG E + E A +P + PAGWAFAIWGPIF E+A AA P S AA ++P+ A A +Q+ WC +FR WAR W P ALL AV LGGAH V+ L +++ Y HLP+++HFGW++ A++V+ N++ A A+ + +++ + S A V V+ ++ DPV + VVAWAL+AVAS+ G
Sbjct: 4 ARDAAVGAIVAAAGGLAVGLAKLASSGWLVSVPAFGMKGWQILSVGAFALNVASVGVPGRVDGEMAEEAKRAMAAKKAATKAPSEAETREPAGIPRAHWSRGLVSPAGWAFAIWGPIFGLESAFAAMVGNPKLSSSNPAAAAVFGVVAPYWAMACGLQALWCAAFRPWARKPRHFWLPGALLALEAVALGGAHRAMVLVSGLPGNALTKNAYLCGHLPIAMHFGWITAAAVVSANSFAAVAAWPKQTRVSLAFKSTWLAAAAAVYVSATSNDPVPSFVVAWALAAVASDGG 294 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig154.10.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig154.10.3 >prot_P-littoralis_Contig154.10.3 ID=prot_P-littoralis_Contig154.10.3|Name=mRNA_P-littoralis_Contig154.10.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=341bp MSFFNSMFPEKPVARAVSVAALAAAGCVGLFFAADSGALVSWGLPYLKPWback to top mRNA from alignment at P-littoralis_Contig154:56646..65919- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig154.10.3 ID=mRNA_P-littoralis_Contig154.10.3|Name=mRNA_P-littoralis_Contig154.10.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=9274bp|location=Sequence derived from alignment at P-littoralis_Contig154:56646..65919- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig154:56646..65919- >mRNA_P-littoralis_Contig154.10.3 ID=mRNA_P-littoralis_Contig154.10.3|Name=mRNA_P-littoralis_Contig154.10.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1023bp|location=Sequence derived from alignment at P-littoralis_Contig154:56646..65919- (Pylaiella littoralis U1_48)back to top |