mRNA_P-littoralis_Contig154.103.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig154.103.1 vs. uniprot
Match: B5LWG6_9PHYC (Putative oligoribonuclease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG6_9PHYC) HSP 1 Score: 209 bits (533), Expect = 1.200e-64 Identity = 98/186 (52.69%), Postives = 130/186 (69.89%), Query Frame = 2
Query: 122 LNVWDTLHVFLHHPYNVLLAKASTWCKGHFCSRSHRGNGLFDECNFSNVSHGNAERLLWNFSEYYSAHEIGNGRPERVATNFMNTTADSHGSILHPHDVAATRYSTTAPHKS-ALLAGSTVHFDRHFLIKEFPCLRKFLSHKSIDVTSILEAFKRFGKGQLRQKPQPGGTHRAGDDIMDSINLMKF 676
LNVWD+LHV +HHP N+L+ K+S WCK FCSRS+ GNGLFD+C++SN S +A L+ NF EYYS HEIG GRP + F + T+ ++G L P+D++ + T +S LLAGSTV+FDR + K FP LRK+LSHK++DVTS+LE KRF + KP+P HRA DDI+DS+ L K+
Sbjct: 52 LNVWDSLHVVIHHPINILMLKSSNWCKEKFCSRSYGGNGLFDDCHYSNTSITDATHLMLNFFEYYSTHEIGRGRPAHKSRTFFDRTSGANGMKLSPYDISCQVQNFTGTRRSQGLLAGSTVYFDRRIIEKHFPVLRKYLSHKNVDVTSLLETAKRFHPDLIENKPKPTMVHRAMDDILDSLTLYKY 237
BLAST of mRNA_P-littoralis_Contig154.103.1 vs. uniprot
Match: Q6XM84_9PHYC (FirrV-1-A3 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM84_9PHYC) HSP 1 Score: 177 bits (449), Expect = 4.050e-52 Identity = 91/196 (46.43%), Postives = 123/196 (62.76%), Query Frame = 2
Query: 122 LNVWDTLHVFLHHPYNVLLAKASTWCKGHFCSRSHRGNGLFDECNFSNVSHGNAERLLWNFSEYYSAHEIGNG--RPERVATNFMNTTADSHGSILHP-----HDVAATRYSTTAP----HKSALLAGSTVHFDRHFLIKEFPCLRKFLSHKSIDVTSILEAFKRFGKGQLRQKPQPGGTHRAGDDIMDSINLMKF 676
LNVWD+LH+ +HHP N+L+ K+S WCK FCS + GNGLFDEC++S S +A + F EYY H+IG G RP +F + T ++G +L P D+ + TT P K ALL GSTV+FDR + FP L+K+LSHK+IDVT++LE KRF ++ KP+P HRA DDIMDS+ L ++
Sbjct: 41 LNVWDSLHLVIHHPINILMLKSSNWCKQRFCSLKYGGNGLFDECHYSETSIADATHKMLQFFEYYCTHDIGTGSRRPPPSERSFFDRTRGTNGVLLSPLRCTHRDIP--KQCTTTPGGSKKKQALLTGSTVYFDRRIIETHFPLLQKYLSHKNIDVTTMLETAKRFRPDLMQYKPKPLMKHRAMDDIMDSLALYRY 234
BLAST of mRNA_P-littoralis_Contig154.103.1 vs. uniprot
Match: D8LPG5_ECTSI (EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI) HSP 1 Score: 160 bits (404), Expect = 5.720e-45 Identity = 79/190 (41.58%), Postives = 121/190 (63.68%), Query Frame = 2
Query: 122 LNVWDTLHVFLHHPYNVLLAKASTWCKGHFCSRSHRGNGLFDECNFSNVSHGNAERLLWNFSEYYSAHEIGNGRPERVATN--FMNTTADSHGSILHPHDVAATRYSTT---APHKSALLAGSTVHFDRHFLIKEFPCLRKFLSHKSIDVTSILEAFKRFGKGQLRQKPQPGGTHRAGDDIMDSINLMKF 676
LN D++ + LHHP+++LLA++S WC+ FC R GNGLF+ C+FS +SH AE +WNF ++YS G ++ ++ F + T ++G+ L D + R+ + +K LLAGSTV+FDR FL+K FPCL+ F ++ +DV++ LE +R+ + P+ G+HRA DDI+DSI+LMKF
Sbjct: 72 LNEIDSMRLVLHHPHSILLARSSAWCRRKFCHRREGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRYDTTQITSSQPFFDRTLGANGTFLGASDASRCRHQQQPRRSNYKKCLLAGSTVYFDRIFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDILDSISLMKF 261
BLAST of mRNA_P-littoralis_Contig154.103.1 vs. uniprot
Match: A0A836CDV0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDV0_9STRA) HSP 1 Score: 108 bits (270), Expect = 4.480e-25 Identity = 74/214 (34.58%), Postives = 105/214 (49.07%), Query Frame = 2
Query: 122 LNVWDTLHVFLHHPYNVLLAKASTWCKGHFCSRSHRGNGLFDECNFSNVSHGNAERLLWNF---------SEYYSAHEIGNGRPERVATNFMNTTADSHGSILHPHDVAA--TRYSTTAPHKSA------------------LLAGSTVHFDRHFLIKEFPCLRKFLSHKSIDVTSILEAFKRFGKGQLRQKPQPGGTHRAGDDIMDSINLMKF 676
L V DT HV +H P VL A AS+WC HF R GN LF +C S +S A LL F + +A E+ PE V + TA+ G ++ D A T H++ + AG + +FDR ++ FP LRK+++HK+IDVTS+LE +R+ LR P P GTHRA D+++SI L+++
Sbjct: 53 LTVQDTFHVIIHQPDRVL-AGASSWCAEHFGPRYAGGNDLFQQCRASVISEAEAGELLEAFIVKHAKPRKARAAAAAEV----PEAVVKRNVFKTAEF-GDVIEDGDAMAGDIEAQDTRRHRAGPAYGRPRPRAQQHDVYRVMFAGCSCYFDRGVILNRFPNLRKYIAHKTIDVTSVLEITRRWRPDLLRSLPAPQGTHRALPDVLESICLLRW 260
BLAST of mRNA_P-littoralis_Contig154.103.1 vs. uniprot
Match: A0A835YX31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX31_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 6.710e-20 Identity = 71/211 (33.65%), Postives = 100/211 (47.39%), Query Frame = 2
Query: 122 LNVWDTLHVFLHHPYNVLLAKASTWCKGHFCSRSHRGNGLFDECNFSNVSHGNAERLLWNFSEYYS------AHEIGNGRPERVATNFMNTTADSHGSILH-------PHDVAATRYS-------TTAPHKS------ALLAGSTVHFDRHFLIKEFPCLRKFLSHKSIDVTSILEAFKRFGKGQLRQKPQPGGTHRAGDDIMDSINLMKF 676
L V DT HV +H P VL A AS WC HF R GN LF++ S +S A +L F ++ A G PE M TA+ G ++ P A R T P + AG + +FDR ++ FP LRK+++HK+IDVTS+LE +R+ LR P P G HRA D+++S+ L+++
Sbjct: 64 LTVQDTFHVVVHQPPRVL-AGASRWCAEHFGPRYAGGNDLFEQSKASVISESAAGEMLEAFIVKHAKPRRARAAAAAEG-PEAACKRSMFKTAEF-GDVMEEVVMPEGPATEGAQRQQPXXXXXRTNRPKAQQHDVFRVMFAGCSCYFDRGAILARFPNLRKYVAHKTIDVTSVLEITRRWRPDLLRCLPAPQGVHRALPDVLESVCLLRW 271
BLAST of mRNA_P-littoralis_Contig154.103.1 vs. uniprot
Match: A0A158PEJ7_ANGCS (Exonuclease domain-containing protein n=1 Tax=Angiostrongylus costaricensis TaxID=334426 RepID=A0A158PEJ7_ANGCS) HSP 1 Score: 69.3 bits (168), Expect = 1.370e-10 Identity = 32/75 (42.67%), Postives = 51/75 (68.00%), Query Frame = 2
Query: 452 KSALLAGSTVHFDRHFLIKEFPCLRKFLSHKSIDVTSILEAFKRFGKGQLRQKPQPGGTHRAGDDIMDSINLMKF 676
K+ LAG++VHFDR F++K P L K L+++ +DV++I E R+ +L++ P GTHRA DDI +SI +++
Sbjct: 97 KTCPLAGNSVHFDRRFIMKYMPLLEKQLNYRIVDVSTIEELAARWYPNELKRAPFKKGTHRALDDIRESIEELRY 171
BLAST of mRNA_P-littoralis_Contig154.103.1 vs. uniprot
Match: Q22ZB0_TETTS (Oligoribonuclease n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q22ZB0_TETTS) HSP 1 Score: 68.2 bits (165), Expect = 1.500e-10 Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 2
Query: 452 KSALLAGSTVHFDRHFLIKEFPCLRKFLSHKSIDVTSILEAFKRFGKGQLRQKPQPGGTHRAGDDIMDSINLMKF 676
K ALLAG+++H D F+ K+ P L FL ++ +DV+++ E KR+ L++ P G HRA DDI++SI +KF
Sbjct: 108 KEALLAGNSIHADMKFIQKQMPNLYNFLHYRLVDVSTVKELTKRWNPEILKKAPVKKGGHRALDDILESIEELKF 182
BLAST of mRNA_P-littoralis_Contig154.103.1 vs. uniprot
Match: A0A871R6H7_DEKBR (Exonuclease domain-containing protein n=5 Tax=Dekkera bruxellensis TaxID=5007 RepID=A0A871R6H7_DEKBR) HSP 1 Score: 67.4 bits (163), Expect = 4.380e-10 Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 2
Query: 455 SALLAGSTVHFDRHFLIKEFPCLRKFLSHKSIDVTSILEAFKRFGKGQLRQKPQPGGTHRAGDDIMDSINLMKF 676
+ +LAG++VH DR FL++E P + +L+++ IDV+S++E KR R P G H A DI++SIN MKF
Sbjct: 111 TGILAGNSVHVDRLFLLRELPSVVDYLTYRIIDVSSVMEFAKRHNPTVERLMPPKIGAHTAKQDIIESINQMKF 184
BLAST of mRNA_P-littoralis_Contig154.103.1 vs. uniprot
Match: A0A8B7Y3W3_ACAPL (oligoribonuclease, mitochondrial-like isoform X2 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y3W3_ACAPL) HSP 1 Score: 65.5 bits (158), Expect = 8.130e-10 Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 2
Query: 464 LAGSTVHFDRHFLIKEFPCLRKFLSHKSIDVTSILEAFKRFGKGQLRQKPQPGGTHRAGDDIMDSINLMKF 676
LAG++VH D+ FL K P L ++ +DV+S+ E +R+ GQ PQ HRA DDIM+SI+ +KF
Sbjct: 81 LAGNSVHEDKKFLAKYMPQFMNHLHYRIVDVSSVKELCRRWYPGQFENAPQKKAAHRALDDIMESIDELKF 151
BLAST of mRNA_P-littoralis_Contig154.103.1 vs. uniprot
Match: A0A7D9CYC9_DEKBR (DEBR0S4_01112g1_1 n=1 Tax=Dekkera bruxellensis TaxID=5007 RepID=A0A7D9CYC9_DEKBR) HSP 1 Score: 67.4 bits (163), Expect = 9.930e-10 Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 2
Query: 455 SALLAGSTVHFDRHFLIKEFPCLRKFLSHKSIDVTSILEAFKRFGKGQLRQKPQPGGTHRAGDDIMDSINLMKF 676
+ +LAG++VH DR FL++E P + +L+++ IDV+S++E KR R P G H A DI++SIN MKF
Sbjct: 183 TGILAGNSVHVDRLFLLRELPSVVDYLTYRIIDVSSVMEFAKRHNPTVERLMPPKIGAHTAKQDIIESINQMKF 256 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig154.103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig154.103.1 >prot_P-littoralis_Contig154.103.1 ID=prot_P-littoralis_Contig154.103.1|Name=mRNA_P-littoralis_Contig154.103.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=161bp MSSDYERMSPWFWLDLETSGLDPQNDFILEKYVSVTDNAERVGHSARFPAback to top mRNA from alignment at P-littoralis_Contig154:379673..380348- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig154.103.1 ID=mRNA_P-littoralis_Contig154.103.1|Name=mRNA_P-littoralis_Contig154.103.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=676bp|location=Sequence derived from alignment at P-littoralis_Contig154:379673..380348- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig154:379673..380348- >mRNA_P-littoralis_Contig154.103.1 ID=mRNA_P-littoralis_Contig154.103.1|Name=mRNA_P-littoralis_Contig154.103.1|organism=Pylaiella littoralis U1_48|type=CDS|length=483bp|location=Sequence derived from alignment at P-littoralis_Contig154:379673..380348- (Pylaiella littoralis U1_48)back to top |