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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 162 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 159 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789734.8883188-CDS-P-littoralis_Contig1537:3280..3356 | 1680789734.8883188-CDS-P-littoralis_Contig1537:3280..3356 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1537 3281..3356 + |
| 1680789734.8985484-CDS-P-littoralis_Contig1537:11442..11525 | 1680789734.8985484-CDS-P-littoralis_Contig1537:11442..11525 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1537 11443..11525 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1537.1.1 >prot_P-littoralis_Contig1537.1.1 ID=prot_P-littoralis_Contig1537.1.1|Name=mRNA_P-littoralis_Contig1537.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=53bp
QAFFTLAEHQGFGLMDGGDDQKLQKPGIAVAVAGGSTAVGLMLLATLPCS
GAG back to topmRNA from alignment at P-littoralis_Contig1537:3281..11526+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1537.1.1 ID=mRNA_P-littoralis_Contig1537.1.1|Name=mRNA_P-littoralis_Contig1537.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8246bp|location=Sequence derived from alignment at P-littoralis_Contig1537:3281..11526+ (Pylaiella littoralis U1_48)
CAGGCGTTTTTTACCCTGGCGGAACACCAGGGTTTTGGGCTCATGGACGG
AGGGGATGACCAGAAACTGCAGAAACAAGATATTTTCGTGCTCTCCATGC
CCATATGCGGCCCAGGAACAACAATCACACACCGTTTTGGCTTATACAAG
TGTTTATACCATTCTTCGGCCCTGCTCACCGCACCCTCAACCGTACCCCT
CAGCGAAGGTGTTATGAATCGTGTACCTCGACCCCAATACAACGTTTTTT
CACGAAAACATATGCTTCTTTCGCAAAAACAGGGTTGTGTTGATCGATAC
ACATGTTATACAGAGGGTGGGAACCTCAAATATACAATACACGACCCTGG
TGGCCCCATCGAACGTCAGGTGAAAACTTCCCGCACCGACCTGCTTTTTT
TGTCTTCAGAGGACTTTCTTTTTTTTTCTGGTGGAACCAGGAACAACAGG
ATTTGGCACTCACAAGCGGAGGGGATGGCCAGAAATTGCGGAAAGCAAGT
ATTTTCATGCTCCCCATGCCCATATGCGGCTCAGGAAATGCAATGACACA
CGGTCTTCGCCCCCACAAGTACCTATGCCATTGTTCGACCTTGCTCACCC
CATTCTACCCAGGATTCACTCGTTCAAAATGTTGCGCATTCGTTGTACGA
GTATGTTTGGAAACCCCAGAGAGTTGGGGCAGGGTCTGATTACCTGTGGT
TTATTTCATCGACCGTATTAGATTCCTTGCCTTAGCGAACCGCCCGTACA
CCAGATTTTTGCATGCTATCGAAGGTCGATGCTTTTTTTCCGGTGGTTTC
ATGGTGTTGCCAACCTCTGACACATGTCATCCGAGTTATATTGCTTGCCG
CAGCGAACAAGCACTAAACGCGAGTACTCTGTTCAATTATCGTGATCTGC
CAAAGAAAGAAGACTATCATAATGCGACATTTTGTCCACGGAAAACAACA
AGAAGAAGCGAGTTGTGAACTTCCTACCACCCCGCATAACACGATGAACT
TGCGTGTCAGACCTCAGGGTCAACAGGCTCTGCCTCCTGTACAGGACGAC
TGAATCGTGCACCCTGGGCTTGAAAGTATCTGAGCGTTAATTTCTATGCC
GACTTCTCACCACACAGACGGGCACATCATTTGCCGGGACAAAACCAAAA
CTTGAGCAGCAATTGAACAACAGCGCAGCCGACACAGGCATCGATACCAC
GTTTAACGAATACAACACCTTACAGCGCAGCGCTGTCCAGTGGATTATTA
CGGCAAAACCGCCATCACATCGGAGACATTGGTCCTACTCTTCTGGACTA
TATACAAGCACGCCAACTAGTCGCAAGTCACTCTGGACTCAAGAAGCAAG
CGCTGAGTTTAAGGACACCAAGTCAAGCCTCCCGAAACTATCGAAAACGC
GCAGCAAGGGCTTTGCGCAGTAACACCTCCCGCATGTCCATAGCGCGGCA
TGACACGCGGACAACTTATCTCTGGGGTGGGCGCCCGCCGCCTCCAACAG
CACGCCCACGAACTTCTTATTGTACTTTGCGTTCTGGAGTTCGTTGATGA
CTCTGAGAGAGTAGGTGAAGTTCGGGAAGTTCATCCCGTTGATGGACCGA
AGGTAAACGGCCTTCTGACCATGGTCGGATTCGTGCACGGTAAGATTTAA
CCCGGCAGCTTCTGTACACTTGGTCATGCCACTATACTTAGCTCTACAGG
CCGGCGCATGGTTTGACTCGTGGTGGCCATCCGGACCCATGCGCAGTCTC
CTTGTGGCCCATCCTTCTCCTTTAGGGTCCTCATCGCTGTTGTCATACCT
CGTGTCGTGAAATATCGCTTCGTAGCCATCGACCTTGTAGTCCTTGGTGC
TCTCGTGTGGCACGGCACTCCGCGCCAATATCACTTGGAGTGACTTCACA
CAAAATACTCCGTTGCTATGGTACAAACACATCTGGCACATCCCGGGCGT
TTTTTTCTAAACGAGGCCAAAGAGACCCACCATTGTACCTCCTCTCAAAA
ACTAGACAACAAAAATCGCACCTGCTACCTCTCTCGCTCCTGAATTTGTT
GGTCGGAGGCCATCCACGACGAAGAGTTCCTTTGCCTGCGGGGATACAGT
AAAACAGAGAAAAAGGAGGGCGCATGGTGATGAAAACAAATGCGACGACG
GAGGGTGAGCTTCGCCATTGATGGAGGGTGAAAACATTTACTTCGTACTA
TCTAGCAACACTgGGGGATAAACCGACTCGGGGCATTATATTACGCGCCC
ACTACTCACCTTAGCGTAGCGTTGCAACCCCGCAAGGATGTCCCCCTGAG
AGATGATGTCTTCGCTCAGCCAAGATGGCAACGCCGACACCTTGCTGGCT
TGCCTTGATCCCGACAAGGACATGAGTACCGGCAGCAAGAACTCGGCGGC
GTCGTGGTGGCTGACAACGTCGGCCTCCTGATTGACACCCGAGCCACCGC
TAGGCGAGGCCTCGGGGTGAGATGAAGGACCTTGTAGAGCCCAGCCGTCG
TTACCAACAACCAAACCTCCCGATGCCGCGTGTTTACGGTGCCAATAGTA
TGAGCATGACAGACACAGGGATGTTGAGTATCGTCAACCGTAATCCCCTC
TGCCCCCCCCCCCCTCCCCGCCAGTGTCGACCGGAGATTAGGACATACAT
GTGGATTTCTAAGCGACGTTTTCAATGGATTTCGGTACAACCGGGAATGA
TGAGCGCCGGGTCTGGACGTCGAACAAGCAGTTCTATTCGGCACTTGTAC
TACCACGAGCGGTTGCATTTATTCTGCCTCGTCCATGGTGCCCCCACCCC
CACCCCCTCCCCCGGGATACTGTTTTCTAATAAAATATTAGCCTTTCCCT
GCGGGGAGGCTTCCGCCAGAAATATGTTCTCAGCAAAAAAAACTTGAGGG
GGGCAACAGAGGGGATGACGGTCATGGCAAAACGCTAACATCTCCCAATC
CCGACAACACAGCGCCATCGTAACGAACTCCCCTGACCATACAAACTTGT
GCACGTGAAAACTGTTGAGGTTGGCATCCAATGAGCGTGTCGTGCAACCT
ACCAAGACAAACCCAAATATGTTACGCGGAAGATGTCATCCTCTTCGTCC
TCTTTTGCATGATGCCGGTGTAGACGTTCGAACGCAGAATGCCATCGAAG
CCAAATTAACCGTAAAACACAGATGAAAAAATTGCTTCCTGGGTAAACTC
CCACCACCGCGCTCACCTTCATCCACGCCACGAAGTCGACCACATCGCGC
GGACTCTCGGGAGTAGCCAACACCTTGCACGCCACCATCACGCCAGATGG
CGTAAAGCCGCATACCATGCCCGCGGTCGACACCCCTCCTCGGCCACCAA
GAAAAAGCTTCGAGCAGTCACCTTGTTGGTGCAGTTCCTTGAAGAGGGCT
CTGAGGTCCTCCACTCTTTTGTACCTGCGTCATTCATCATGTACACATGG
GCGTCACGGCACAGACCTTTCTCAGTCGTGGACATCGAAAGGGGCACATC
GAAAGGGGCACCTAGTGCAACCCCTCTATACAAGGCTTGGGGGATTGAAA
CAACTACGATGAGGCCGGTTGACATCGAAAATAGTGCCACGATAGGCCTG
GCAAAAACCCAGAGGTGTTGTTACTGAATACAAGGTTACCTATCGTACGA
TAGCTGCACGGGCTACATGACCACTACCGGTATTTCTGGCTGTGTGGCAG
CAAGCGCAACATGGGCACCAACGACTTTTCGTACGAACACCAGGTCACCC
GCTGCTTCCTCTCGCGCCGAACACGGTCTTGTACATCTCTTTGAGCTGGT
TCATCGACATACCATCGACCAGGCTCACCCCCACACCCTCCTGCTGCTGG
TTCAACGCGGTGACGAGGTTGTCACGTTCGTTGTCCTTGAACTCCCGGCT
CGGTCTTTCTACGACCGCCCGCGCCGTCTTCTGCACCGTTTCGGACCGCC
GGTTAGCCGGTGCGGACCAGCAAGGCGATACACCCTTGGCCTCCATGGCT
CCCAAAACAAACTGCACGCGGACGAAGAAAAAGACTGATGACACCAAGCT
CAGCTTGAGGCAGCATGTCATCAGATCTTGGTCAATAGCTGTGGCTTTTC
TCGACGACTCCGCCAGCCTCTTCGTCATGAAGTTGTTTGCCATCTTCACA
CACGCGTCGTAAGTCACGATTGCAGAACAGTTGCCCCACATCCAGCACCG
AAACTCGAACGGGAAGTCGACGAGGGCCAGGAACGCAAGGAAGGCGTTCG
AGAGTTGACTGTAGAACCTGGAATCTTTGTTGCCGATGCTGCATTTCGGT
GTGCCACAAGTAACAGCATGGAAAATACAGGCAATTCGGGTTGACACAAA
CACAGCTCAATGCGTAAACACGGTGCGGTTTGGTTTTTACACAGAGGTGA
AATCGAGTCCCATCAGCCAAACACTAAAAAAACAATGAATCCTCGCTCCA
AACGTCGAGAATGACGACAACCTAAACGTTGGCGACCCGCGGTGGTATGT
TCCAGGCCGTCCGAGTGCTGCCCTCTTTGCGATGCATCAGACAGTACTCG
TGGCGACATGCCGATACACCACGGCGTTGCTTCGTTAGGAGTGGTACCAC
CATGTGTGTGCCATACACGTGCTCGTTACCGTTCAGTATCACGACGAACA
TCTCCACTGATGTCCGACGTGTATATCCTCGCAAAAAGGCGCAGCCCAAA
ACAAGATGTTACTATGAAAATGTTCTCGCTAGTTTTTCCAACACCGATCG
TACTTGTTGCAATGGGAGCGTCATCACCGTCCCCATGGTTACGAACGTCG
GGGCCAGCGGGTGAACCCTTCTGGGGCCAGGCCATTTTGTGCTTTTCTGC
GCGGACGGCACGGGTTCGAAATTGGAACCAGTGGTTTTTCTCGGAGAACC
AGACGAAAAATTGGCAGCTGTGAGCAAACCAAGATATTTACACGTGAGAA
CCTCACAGGCAGACTGCCAGGACTCCTAAAGAATTGTCGCAACAGGCTGT
TCACGTCCCTGGAGAGGCTGCAAGGGATACCCGGTTATCGCCATGCCGCG
TCCTACTCTCTATTCTCACAGACTCACGGAATTACGCTTGTTCTGCGCTG
CCCACAATACTTTCACCACTCACCCCAGTGACGACCTTTGCATCCTCGTC
CTCGAGAGCATCCAGAGTGCCCCCACAGGTGCACTTGCGTTGGGATACTT
TGAACCTTCTACCCGCTTCTGCCGTCACTGGCGGCAGCTCCGAGGGGCGG
ATGGGTGGAAACTTGTGACGCGAAATGTAGAAGAGCATATCATCCACCTT
CAAACGATAATCATCGGGGGAACGCTTGGCGAGCAACTGCGGAGTACGGG
GCAACACAGGTCCACCCGACGAGGCACTTCCAGAAGCATCATCTGCATCA
GCCGTCGTCCCGCTCCTCGCAACGGTCGAACCCCGCCCCAAGACGCCCGT
GAAGATTGCGACGATCAACGTGTGCACGCATCTTGAGCGCTTCTTTTCCT
TGAATTCGAGCAGCCCTCTCCCTTCGCGGACTGAGGGCGTGCGCGCGAAG
GAGTATGTAGCATGATGGATGAGCAACAAGTCAAACTAGCATAGCACAAG
CACCAAAAGTTTTGGCTAAAAGAGCAGCGACAGGAATGCGCCAGTTACCA
CTTCGACCAAAAGGCAGGGGACGGAGGCATGACCTGGATTTGACCTGGGG
TTTGATAGGAGGGTCTCAATGACTGCGATAGTCATGCCCTGATGTATCGC
CCTGTTTCATATGTCTATGGAGTTCCCCTTACGAATACACATATTCAAAA
GGCCCCACATGTCGCACATGCATCTACGCATCTACAACCTCTTGCCAATC
GGTAGTACTTGAATAAAAAAAGGCTCACATACGACGTCAATGGCAATTCC
CATCACAAACTTTGCTCTTCATCTCTGCGTAATCTCTGCGTAGCCTTACC
CTGCACATGAGGTGCCGCTCAGGAGTCAATCTTCGGGGCGCACTGCCGGG
TGAGACTTCGTCATTCTTCACACATCCCCAGTCCTGCTCGGTCGTTCGTT
TCCGGTTGTCGTAGATGGCGAAATGACGACGTTCCGTCTCGTACAGCGGC
CACACGCCATTCCTGTCTGCCCCCACAATGACTGCCATCACATCATCGAA
CTCCGGTTGAGTCCAGACCAGCCGCCTTCGCTTTTTCCGCCAGCATCTTA
ACTCCGTCAAAGGTTTGCTCTCCCGCAATCCTCACCTTGGTGGCGTGTTT
CACTGTTTTCTTCTTGATGTGGAGTAACGCGGCAGCGCCGTGTCGACACG
CCTCCGATCAAGCTGGGCACCCCACCGTTGTTCGCCGACGTCTGTCGCTG
AGATTGAATCCCGCCCCCTGCTCGCAACGAAAAAAGATGCCGTTCGAGCT
GAAGGGAACAAACAACGGACCACCACCGCTGAATTTCACCTAGACTTGGC
ACGGAACGATTTTTTCCACATTGTTTCGTTCTAGTGTTGTTTCAGTTTGT
GATTTTGTGACATCAGATGGCACAAGTACGTGTTCTGCCGGCTACGCAAC
GTGGTCGATGGTGGCGGGTAGGGGTCAAACCCCAAGACGAGGTGTCCTGG
GCTCATGAACGTTTGAAATGAACACTTCAACACACTATTTCGAACGACTT
GAGGTGACGAAACATGAGGTACAACGGGGATCTCTTGCAGCGTACAAGTT
GATACCTAAACTTGTTGTCTCTTTCACACGCACACAGCACTTTAGGGTAA
TACCCGCCTCACCCAAAACACTGTTGTCTTGAGTAAAGGACGCTCGCTCT
TCGTTGACCGATGTGATCACTCGGTTGTCAGCATTTCCTGAGCGCCATAA
AGCAGAAGATGTAGTGCTTTTGTCGCCGCAAATGGCGGGCAACAAGAAAA
TGCTTTGCCTCGCCTCATCACTCCCAAACGTTCGCCCTGGGTGTCCTCAT
AACAGGTCGCCACAACAAATGTATAGCTGTGACAACATAAGGACGAAATA
TACTGGCAGGGCCACTAACAAAGCTGGTTACGCCCTTGTTCCTGCAAGAG
ATAGCCGGTGATGCTGCTGCCAGATATCAAATATCGTGGAATGACGGTGG
AATGGTGGCTGTATAGAAAAGGCCTTCTATCGTATACTCTCCTGCAACCA
AGATAACAAGAGGACACGTGCACTAAAATAAGAAAAACTGATTCTTCACT
GTAGCTCCCCCCCTAGCAGAACCTGGACCTCGCAAATGTCATTTTGTTTT
ACTGGAGTGGGCCTAGTGGTAGGTTTCACTATTCCACTAATGCACTGCTG
TTGTACTGCTGTACAACTGTAGCAGCGCCCTCCAGTTTTACAGGTACACC
ATACATGATATTGTAGGACTAGGACTGACACCCTGCATCATACGTATACC
TCAAATCAACACATGAGCAGCAACCTGACGATGTGGTCAGTTGCTGCTGC
TGCTACTGCGTGCGGACTACCCGTACTGGGACTACCCGTACTGGCGTGTG
TAGTGTGACTGCTGCTCTGTGTGTGCTTGGTGGTCTGTATGACGGTGTGA
GGCGAGAGAAATGCAAAACCACAGCAGCAGCAGGAGCAGCAGCAGTACCA
TATCATATCATATCATATCACATCGTGCGTGCCACTAGTCCCACTAGTCC
AATACTGCAGCAGTAGCGTACAACGTGGTGAACCAGCTAACTCCTCTCCG
TCGCGGGTTGGAAATGACGATAGGTATTATTATGGTTTTATATGGACTGT
TTTCTATACCCAGCCCGAATGGACCGCCCCTCTGCCCCCCCCGCCCGCCA
AATAAAAATCTAGGATGGGTAACAGACTTGCTAAACTCACTTGTAACAGC
AGCACGTGTTCTTCTCGGACGCCCGGTGCGTGCAGCATACCCTTTTCACA
CCAGGTCCTAGTGAAACCTCGTGTGCGTGGCTCTTGTGTACCCACCGTCG
GCAGTCGGGATTATCCTCGCACAGCTTCAGCCTTTGGCGGCTCCGCGTCT
CGGTTAGATTGCAAACTGCGCATTGCTTGTTGTACGCGAAGTTCGTTACA
GCTCCGACGTCGCTGTTGATGCCTCCACCACCCCGTTTGCGACGGCGCGG
CGTTGCGGGTGTTGCCGATGCTGTCGTCGCTGCTGCTCCTGCTGCTGCTC
CGGTTGCTGCTGCAGGCATCGCGGTGGCGGTTGCTGGGGGAAGCACTGCT
GTAGGACTGATGCTGTTGGCCACCCTTCCCTGTTCTGGGGCTGGTC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1537:3281..11526+ >mRNA_P-littoralis_Contig1537.1.1 ID=mRNA_P-littoralis_Contig1537.1.1|Name=mRNA_P-littoralis_Contig1537.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=159bp|location=Sequence derived from alignment at P-littoralis_Contig1537:3281..11526+ (Pylaiella littoralis U1_48)
CAGGCGTTTTTTACCCTGGCGGAACACCAGGGTTTTGGGCTCATGGACGG
AGGGGATGACCAGAAACTGCAGAAACCAGGCATCGCGGTGGCGGTTGCTG
GGGGAAGCACTGCTGTAGGACTGATGCTGTTGGCCACCCTTCCCTGTTCT
GGGGCTGGT back to top
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