prot_P-littoralis_Contig153.124.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig153.124.1
Unique Nameprot_P-littoralis_Contig153.124.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length166
Homology
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BLAST of mRNA_P-littoralis_Contig153.124.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 2.860e-38
Identity = 79/136 (58.09%), Postives = 99/136 (72.79%), Query Frame = 0 
Query:    3 LTILGVIALTRHIFRDEGWVNEGSRRRYKFPRDLSQ--DIIEHRFGHIRPDQGTHKNPKKEAAFASGMKADAVRNAQQSKRRKSDRGSGPFRLDLGGDSARATMPVSEKQSKDPMRTRDRDRGDFIFEARSLRLRS 136
            LTILG +A+TR++F D+ WV EGSR RYKF RD +Q  D  E RFGHIR +QG HKNP+KE+AFA+G +AD VR AQ SKRR SDRG   F+LD+   +A AT+PV+E+Q + PMR     R  F+ EARSLR +S
Sbjct:  561 LTILGFVAMTRYVFGDDDWVTEGSRGRYKFMRDWNQASDTCEKRFGHIRANQGCHKNPRKESAFAAGHRADVVRKAQMSKRRDSDRGKDAFKLDMVSAAAEATLPVNEQQRRYPMRAEGAGRAGFVREARSLRRQS 696
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BLAST of mRNA_P-littoralis_Contig153.124.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.400e-16
Identity = 52/131 (39.69%), Postives = 73/131 (55.73%), Query Frame = 0 
Query:    4 TILGVIALTRHIFRDEGWVNEGSRRRYKFPRDLSQDIIEHRFGHIRPDQGTHKNPKKEAAFASGMKADAVRNAQQSKRRKSDRGSG-PFRLDLGGDSARATMPVSEKQSKDPMRTRDRDRGDFIFEARSLR 133
            TILG +A+ R++F+DE  V+ G   R+ +PR  SQDI+EHRF HIR  +GTHKNP    A  +    D  R    ++RR S R +G  F+L+      RA  P +  +    +R   RD    +FE+RS R
Sbjct:  544 TILGFVAMCRYVFKDEDLVSGG---RFLYPRMFSQDILEHRFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNSSRSAGMAFQLE-DSQGVRAAFPANASERAQVVRAETRDDAHHVFESRSFR 670
[Close]
BLAST of mRNA_P-littoralis_Contig153.124.1 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.270e-15
Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 0 
Query:    5 ILGVIALTRHIFRDEGWVNE--GSRRRYKFPRDLSQDIIEHRFGHIRPDQGTHKNPKKEAAFASGMKADAVRNAQQSKRRKSDRGSGPFRLDLGGDSARATMPVSEKQSKDPMRTRDRDRGDFIFEARS 131
            ILG +A++R+IF D   V E  G  RR+ +PR  SQDI+EHRF HIR   GTHK P    A       D  R +   +RR + R +G F +     S R  +PV+  + ++ +R    DR D +FE+R+
Sbjct:  764 ILGFVAMSRYIFADRDLVEEEGGVPRRFLYPRMFSQDILEHRFAHIRTGMGTHKAPTATQAARQAKHGDTCRVSHGLQRRNASRSTGSFEVQSSA-SIRVALPVNASEREEVVRAATWDRDDHVFESRA 891
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig153.124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K071_9PHAE2.860e-3858.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Z3_9PHAE1.400e-1639.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFP1_9PHAE1.270e-1538.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig153contigP-littoralis_Contig153:479719..480413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig153.124.1mRNA_P-littoralis_Contig153.124.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig153 478590..480637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig153.124.1 ID=prot_P-littoralis_Contig153.124.1|Name=mRNA_P-littoralis_Contig153.124.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=166bp
MILTILGVIALTRHIFRDEGWVNEGSRRRYKFPRDLSQDIIEHRFGHIRP
DQGTHKNPKKEAAFASGMKADAVRNAQQSKRRKSDRGSGPFRLDLGGDSA
RATMPVSEKQSKDPMRTRDRDRGDFIFEARSLRLRSNDQIDVGGVERGLA
GDPSREAATGVGLPL*
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