mRNA_P-littoralis_Contig153.81.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig153.81.4
Unique NamemRNA_P-littoralis_Contig153.81.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig153.81.4 vs. uniprot
Match: D7G8Q8_ECTSI (Similar to Ecdysoneless homolog (Drosophila) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q8_ECTSI)

HSP 1 Score: 1011 bits (2613), Expect = 0.000e+0
Identity = 567/825 (68.73%), Postives = 637/825 (77.21%), Query Frame = 2 
Query:  119 SAEEDWFANLSNNPGPSLEDFLATDPSHLPFLQEQPATAEDLIRYQIFADDWGSIEHLQQLRKSVLQLVESSTTGFIWHREAFALSVAVPMEGDLEPHLAGEQVVGGNVSDEWFVCYLLFTITSTFPTLTACVTDSDGEFLLIEAATAIPPFLSPANSNHRVWVRSGQVHLVMPGCMVDRARTPRTLGSGSIAVSEGLKAIRESDGGTEADEGVQRLIRRRIGGYPHEAKASMHHARCFLPLPVALAIRDTPGLVAPAVRAFCSGGYADKKLGVRMARLLVLPTGGSGANIAGNAPRGSQAGAPIFVEARVAFTRQLYAQLHQAAAVPGKDFPPGWGPDRSTLSPAAHTKAAQLGQKLSMGLEAAYQXXXXXXSKTTRGDLRSAIRPEAWKRFLDRLARNGFFEGELEGSKRYREKISMAEQFVRNSVLHVD--DGADEEVAAAQRDLRRCPVHEVVDRALSSADRDNMLEPSVEEDDKEDWLEVSQADLDIMLQDYRRAEVR-DTWKNCRR-RSDGGVVGGD-HEQDGSY-FRSAYAASSVTDEVAADERKKAQESQAGFADAVDGLDDIVSGMNAFVDDSRAGLDGAEVEPVGGHVQFDVDKFMSLLNGEDLMSALEDAAKEGGNADLHESDXXXXXXXXXXXXXXMEQGPQRMPEPRGFK-ARPEDSSVSGSRNHSNSTCDVPGDIPTEKGDRGDGVKGRNYHVRTRVGTRPSVAFQMQEMEGRPREEDDQDASLEESDAQRQDGGRESKGDTGSTENFVRDYMAAMEAELDPSTIGQSFEKVGDTISKAQMEELQTVGPLDQNTGRA-EEWLRQGAAHSST 2569
            SA+EDWFA  SN+PGPSLEDFLATDPS LPFLQE+PATAED +RYQIF D W SIEHLQQLR+SVL+LV+S T GFIWHREAFALSVAVP +GDLEPHL GEQV GGNVSDEWFVCYLLFTITSTF  LTAC+TDSDGEFLLIEAATAIPPFLSP N   RVWVR G+VHLVMPGCMVDRARTPRTLGSG+I +SEGLKA+RESDGGT+ADEGVQRLIRRRI GYP EA A+MHHARCFLPL  ALA RDTP LVAPAV A+CSG  AD+K+GVRMARLL +P   SG + AG+   GSQ  AP FVEAR+AFTR LYAQLHQAA VP K F PGWGP RSTL+PAAH KAAQLGQKLSMGLEAAYQ      SK   GD   AIRPE WKRF D L RNGFFEGELEGSKRYREK +MA+QF+R++VL VD   G DEE+AAAQRD RRCPVH+VVDR L+    D + +   EEDDKEDWLEVSQADLDIMLQDYRRAE   D  +  RR R   GVVG D +E+D S    ++ A  + TD    DE K  Q+S AGFADAVDGLD+IV+GMNAFVDDS+AGLDGAEVE VGGHVQFDVDKFMSLLNGEDLMSALEDAAKE  + +L +SD         XX   ++  PQRMP+P+  + A   D S  GSR  S+   +V  + P +           + H++TR G RPSVAFQMQEMEGRP EED        SD + QDGG ESK ++GS E+ VR+YMAAME EL+PS++G+SFEKVG +I +AQMEELQTVGPLDQN   A E+WLR G A SST
Sbjct:    4 SADEDWFAGNSNDPGPSLEDFLATDPSQLPFLQERPATAEDFVRYQIFVDAWSSIEHLQQLRESVLELVDSITAGFIWHREAFALSVAVPSDGDLEPHLTGEQVFGGNVSDEWFVCYLLFTITSTFTELTACITDSDGEFLLIEAATAIPPFLSPGN---RVWVRFGEVHLVMPGCMVDRARTPRTLGSGTITLSEGLKAVRESDGGTKADEGVQRLIRRRIEGYPEEAMANMHHARCFLPLAAALAFRDTPRLVAPAVSAYCSGDPADRKMGVRMARLLAIPASASGVSTAGSKGAGSQPEAPRFVEARIAFTRHLYAQLHQAAVVPTKAFHPGWGPSRSTLAPAAHAKAAQLGQKLSMGLEAAYQACAES-SKKDGGDFSDAIRPETWKRFADGLVRNGFFEGELEGSKRYREKTAMAKQFIRDNVLCVDADGGEDEEIAAAQRDHRRCPVHQVVDRTLNDPRLDCVFDAFGEEDDKEDWLEVSQADLDIMLQDYRRAEADLDPEQQGRRDRGANGVVGDDDNERDRSENVATSGARGTATD---TDEEKHVQDSHAGFADAVDGLDEIVTGMNAFVDDSKAGLDGAEVEAVGGHVQFDVDKFMSLLNGEDLMSALEDAAKEDAHDELGDSDDDLLESSEEXXEDDVDT-PQRMPDPKASESAGLTDPSACGSRTRSSLAVNVSPNSPAKS----------DSHIQTRSGVRPSVAFQMQEMEGRPSEEDHDGLG---SDGREQDGGHESKANSGSAESLVREYMAAMEIELEPSSMGESFEKVGASIPEAQMEELQTVGPLDQNGELAPEQWLRDGKAPSST 807
[Close]
BLAST of mRNA_P-littoralis_Contig153.81.4 vs. uniprot
Match: A0A836CNJ5_9STRA (SGT1 protein-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNJ5_9STRA)

HSP 1 Score: 273 bits (699), Expect = 1.960e-75
Identity = 225/643 (34.99%), Postives = 306/643 (47.59%), Query Frame = 2 
Query:  161 GPSLEDFLATDPSHLPFLQEQPATAEDLIRYQIFADD-WGSIEHLQQLRKSVLQLVESSTTGFIWHREAFALSVAVPMEGDL---EPHLAGEQVVGGNVSDEWFVCYLLFTITSTFPT--LTACVTDSDGEFLLIEAATAIPPFLSPANSNHRVWVRSGQVHLVMPGCMVDRARTPRT-------LGSGSIAVSEGLKAIRE------SDGGTEADEGVQRLIRRRIGGYPHEAKASMHHARCFLPLPVALAIRDTPGLVAPAVRAFCSGGYADKKLGVRMARLLVLPTGGSGANIAGNAPRGSQAGAPIFVEARVAFTRQLYAQLHQAAAVPG---KDFPPGWGPDRST--LSPAAHTKAAQLGQKLSMGLEAAYQXXXXXXSKTTRGDLRSA----IRPEAWKRFLDRLARNGFFEGELEGSKRYREKISMAEQFVRNSVLHVDDGADEEVAAAQRDLRRCPVHEVVDRALSSADRDNM----------LEPSVEEDDKEDWLEVSQADLDIMLQDYRRAEVRDTWKNCRRRSDGGVVGGDHEQDGSYFRSAYAASSVTDEVAADERKKAQESQAGFADAVDG----LDDIVSGMNAFVDDSRAGLDGAEVEPVG-GHVQFDVDKFMSLLNGEDLMSALED 1960
            GPSLEDFLA+D S LPFL+    +  D + Y++F D  W + E L+QLR  +L    S+    IWH E + LSV  P        EPHL G  + G N+ DEW + +LL   TS   +  LTA V D DGEFLLIEAA AIPPFL+P NS HRVW+R G VH+++P      A +  T          G +++SEGL  +R       S   T A   VQ+ I RR+  YP +  + +H AR FLP  VA A+R  P L+APAV+A     Y+ ++ G   A   +   G +        PR         VE R+ FTR LYAQ+  AAA P    + FPPGWGP      LS  A   AA LGQK+++G+E  Y       +     D  +A     RP     F   L   G+F+G + GS+ Y++K + A QF+     H   G      A   D +   V+ ++   L+S  ++              P  E++D E W+ V  ++L+ ML     A +                   H Q  S   +A        E+A  E  +  ++    ADA D     LD+IV GM AF+ +  +G  GAEV       + FDV KFM LL G D +   ED
Sbjct:   11 GPSLEDFLASDASGLPFLRGLEQSL-DSVEYRVFVDPPWQAAEALEQLRDLLLADARSTLGEHIWHCEPYILSVRTPPASSTTSPEPHLYGRTIFGDNIDDEWLIVHLLMQATSRHRSQGLTASVVDGDGEFLLIEAADAIPPFLTPVNSQHRVWLRDGAVHILLPDSSPTAANSGVTGPNATPAQKQGPLSLSEGLHLLRNRCQHPGSSSTTLASGHVQQAIARRLAPYPGKIASDVHRARAFLPRAVAAALRRHPSLIAPAVQA-----YSGREPGEGSAAAAMRALGRAAV------PRAC-------VECRLRFTRHLYAQI--AAAPPMVALQSFPPGWGPAGGAPHLSADAADAAAALGQKVALGMEILYMRAQRATAAAAAPDATAAGAAAPRPLPAS-FAHALEERGYFDGAMRGSRPYQQKAAQAAQFL---TAH---GGSVSADARHEDAQLHAVYVLLQGVLASLQQEGAATAPPPEAAPFPPVTEDNDDEAWMVVQPSELEAMLTRQNNAPL-------------------HAQFASAAAAAPXXXXXXVELADGEELRDVQNAVFDADAADDPAAVLDEIVRGMGAFMGNEGSGAQGAEVPAAALSGISFDVAKFMRLLEGIDDLDVSED 606
[Close]
BLAST of mRNA_P-littoralis_Contig153.81.4 vs. uniprot
Match: A0A2I0K1W3_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0K1W3_PUNGR)

HSP 1 Score: 199 bits (505), Expect = 5.700e-51
Identity = 161/492 (32.72%), Postives = 239/492 (48.58%), Query Frame = 2 
Query:  158 PGPSLEDFLATDPSHLPFLQEQPATAEDLIRYQIFADDWGSIE------HLQQLRKSVLQLVESSTTGFIWHREAFALSVAVPMEGDLEP-HLAGEQVVGGNVSDEWFVCYLLFTITSTFPTLTACVTDSDGEFLLIEAATAIPPFLSPANSNHRVWVRSGQVHLVMPGCMVDRARTPRTLGSGSIAVSEGLKAIRESDGGTEADEGVQRLIRRRIGGYPHEAKASMHHARCFLPLPVALAIRDTPGLVAPAVRAFCSGGYADKKLGVRMARLLVLPTGGSGANIAGNAPRGSQAGAPIFVEARVAFTRQLYAQLHQAAAVPGKDFPPGWGPDRSTLSPAAHTKAAQLGQKLSMGLEAAYQXXXXXXSKTTRGDLRSAIRPEAWKRFLDRLARNGFFEGELEGSKRYREKISMAEQFVRNSVLHVDDGADEEVAAAQRDLRRCPVHEVVDRALSSAD-RDNMLEPSVEEDDKEDWLEVSQADLDIMLQDYRR 1609
            P P +   L +DP    F +      +D + Y IF D   S         LQ LR  +L  V   T+ +IW  E F+LS++       EP HL G+   G N+ DEWFV +LLF IT  FP L+A V D+DGEFLLIEAA  +P +L+P+ S +RV++R G +H+V       + + P      S ++++ LK +  ++  + A + VQ  I+ RI  YP  A+ +MH AR  +P PVA  +R  P L++ AV  F        KL  +M + L               PRG +      V   V  +R +YAQL Q      K +P    P RS +      + A+LG K+S GLE AYQ      ++          R  AW+ + + L   G+F+G L GSK YR  +  AE++ RNS L +   A E ++A    +RR  + E+     S+ D R   + PS    D + WL   + +L+  L++  +
Sbjct:    4 PPPPMPPALDSDPFASIFSRNGSRLPDDTVFYAIFPDASLSSPAPDLSLRLQSLRHDILAAVSPFTSSYIWQHEPFSLSISSSSSTAAEPLHLHGKLRYGDNLEDEWFVVFLLFHITRKFPDLSARVWDTDGEFLLIEAAFHLPRWLNPSTSLNRVFIRRGDLHIV------PKTKIP------SPSITDSLKFLIANENESRAADPVQAAIKSRISDYPDRARRNMHRARVRVPPPVAQVLRQEPCLISVAVEGFYDRDIDSMKLASKMEKFL---------------PRGRE---EELVPVSVTMSRAMYAQLVQQTFQAPKCYPM---PSRSDIKAY---QEAELGMKISCGLEMAYQLRRREGAEG---------RGSAWEEYKESLESIGYFDGLLPGSKEYRRLMEKAEEYYRNSSLFLR--ACETMSAP---VRR--IDEIFSLPYSADDFRTEEVPPS----DDDSWLYNGEDELNSALREREK 439
[Close]
BLAST of mRNA_P-littoralis_Contig153.81.4 vs. uniprot
Match: A0A6J2WJ44_CHACN (protein ecdysoneless homolog n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WJ44_CHACN)

HSP 1 Score: 202 bits (514), Expect = 6.810e-51
Identity = 156/497 (31.39%), Postives = 243/497 (48.89%), Query Frame = 2 
Query:  212 LQEQPATAEDLIRYQIFADDWG-----SIEHLQQLRKSVLQLVESSTTGFIWHREAFALSVAVPMEGDLEPHLAGEQVVGGNVSDEWFVCYLLFTITSTFPTLTACVTDSDGEFLLIEAATAIPPFLSPANSNHRVWVRSGQVHLVMPGCMVDRARTPRTLGSGSI-AVSEGLKAIRESDGGTEADEGVQRLIRRRIGGYPHEAKASMHHARCFLPLPVALAIRDTPGLVAPAVRAFCSGGYADKKLGVRMARLLVLPTGGSGANIAGNAPRGSQAGAPIFVEARVAFTRQLYAQLHQAAAVPGKDFPPGWGPDRSTLSPAAHT--KAAQLGQKLSMGLEAAYQXXXXXXSKTTRGDLRSAIRPEAWKRFLDRLARNGFFEGELEGSKRYREKISMAEQFVRNSVLHVDDGADEEVAAAQRDLRRCPVHEVVDRALSSADRDNMLEPSVEEDDKEDWLEVSQADLDIMLQDYRRAEVRDTWKNCRRRSDGGVVGGDH 1678
            L  +PA  ED ++Y++F    G       E LQ+L++ +L         +IW ++ F L    P +G +  HL G    G NV DEWF+ YLL  IT TFP LTA V D+DG+FLLIEAA  +P +L+P  S +RV++  G++H++           P+    G + +VS+ L+ +        A++ +Q  +RRR+ G+P + + ++H A C+LP  +A+ +   P L+APAV AF    Y    + ++  R                 P  ++      V   V FTR LYAQL Q + VP  D   G+     TL P +H   +A +LG KL+ G E            +   D  ++  P  WK FLD L +NG+F GELEGS  Y+E ++ AE F + S           V+  Q       V +V+  A  S +     E  +  +D ++WL+++  DL+ +L++     V +  K  +    GG + GD+
Sbjct:    5 LLRRPALPEDAVQYRLFLVQTGPNTQTGEELLQRLQEKILAEFAPLLVPYIWQQQPFNLKY-YPEKGGVPAHLGGSTEFGDNVEDEWFIVYLLRQITQTFPELTATVQDNDGQFLLIEAADYLPKWLNPETSENRVFLYRGELHILPNSVQSGEVGWPK----GKVPSVSQALEVLSSHSKSCLANQKIQSSLRRRLQGFPEKIQLNLHRAHCYLPAGIAVVLSQRPDLLAPAVSAF----YLRDPIDLQACRTFKY------------FPPDTR------VLTSVTFTRCLYAQLQQQSFVP--DRRSGF-----TLPPRSHPQYRAHELGMKLAHGFEILCSKCE---QTSVESDSPASCSP-FWKGFLDSLKKNGYFRGELEGSACYKELMTSAETFFKQSFTSTQSA----VSPGQ------VVLQVLQSAPYSLEELRKKEEHLPPEDSDNWLDLTPQDLEHLLEERGGRGVNEVAKERKGDIWGGRIRGDN 453
[Close]
BLAST of mRNA_P-littoralis_Contig153.81.4 vs. uniprot
Match: A0A3B4EE71_PYGNA (Ecdysoneless cell cycle regulator n=2 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4EE71_PYGNA)

HSP 1 Score: 199 bits (507), Expect = 3.210e-50
Identity = 156/473 (32.98%), Postives = 232/473 (49.05%), Query Frame = 2 
Query:  233 AEDLIRYQIFA---DDWGSIEHLQQLRKSVLQLVESSTTGFIWHREAFALSVAVPMEGDLEPHLAGEQVVGGNVSDEWFVCYLLFTITSTFPTLTACVTDSDGEFLLIEAATAIPPFLSPANSNHRVWVRSGQVHLVMPGCMVDRARTPRTLGSGSIA-VSEGLKAIRESDGGTEADEGVQRLIRRRIGGYPHEAKASMHHARCFLPLPVALAIRDTPGLVAPAVRAFCSGGYADKKLGVRMARLLVLPTGGSGANIAGNAPRGSQAGAPIFVEARVAFTRQLYAQLHQAAAVPGKDFPPGWGPDRSTLSPAAHT--KAAQLGQKLSMGLEAAYQXXXXXXSKTTRGDLRSAIRPEA-------WKRFLDRLARNGFFEGELEGSKRYREKISMAEQFVRNSVLHVDD----GADEEVAAAQRDLRRCPVHEVVDRALSSADRDNMLEPSVEEDDKEDWLEVSQADLDIMLQD 1600
            +ED++ Y++F    D   S E L QL + +L  +      +IW ++ F LS   P +G +  HLAG    G NV DEWF+ YLL  +T TF  L A + D+DG+FLLIEAA  +P +L P +S +RV++  G++H++           PR     S+  + E L  + +      A + ++  I RR+ GYP + ++S+HHA C+LP  +A  +   P L+APAV AF    Y    + ++  R               N P  ++      V   V FTR LYAQL Q + VP  D   G+     TL P +H   KA +LG KL+ G E             ++  L +A   EA       W+ FLD L RNG+F+GELEGS RYRE ++ AE F + SV         G  EEV             +V+  A  S +     E  +  ++ +DWL +S  +L+ +L++
Sbjct:   10 SEDVVHYRLFLVHPDTQTSEETLPQLLEDLLAELAPLLVKYIWQQQPFNLSYH-PEKGGVPAHLAGSTEFGDNVEDEWFIVYLLKHLTRTFSQLAASIHDNDGQFLLIEAAEYLPKWLDPDSSENRVFLYRGELHILPNRTRSGEVGWPRD----SVPFLQEALDVLHKHADHCLAHQRIRSAIDRRLQGYPDKIQSSLHHAHCYLPAAIAAVLSQRPALIAPAVSAF----YLRDPIDLQACRTFR------------NFPPDAR------VLTSVTFTRCLYAQLMQQSFVP--DRRSGY-----TLPPRSHPQYKAHELGMKLAHGFEIL----------CSKNGLAAAAGHEAPVSSHPHWRGFLDSLQRNGYFKGELEGSVRYRELMTSAENFFKQSVTRTHSSSVHGPGEEVL------------QVLQSAPYSLEELKKQEAHLPPEESDDWLNISSQELERLLEE 426
[Close]
BLAST of mRNA_P-littoralis_Contig153.81.4 vs. uniprot
Match: UPI00147184D8 (protein ecdysoneless homolog n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI00147184D8)

HSP 1 Score: 200 bits (509), Expect = 3.290e-50
Identity = 162/503 (32.21%), Postives = 237/503 (47.12%), Query Frame = 2 
Query:  218 EQPATAEDLIRYQIFADDWGSI------EHLQQLRKSVLQLVESSTTGFIWHREAFALSVAVPMEGDLEPHLAGEQVVGGNVSDEWFVCYLLFTITSTFPTLTACVTDSDGEFLLIEAATAIPPFLSPANSNHRVWVRSGQVHLVMPGCMVDRARTPRTLGSGSIAVSEGLKAIRESDGGTEADEGVQRLIRRRIGGYPHEAKASMHHARCFLPLPVALAIRDTPGLVAPAVRAFCSGGYADKKLGVRMARLL-VLPTGGSGANIAGNAPRGSQAGAPIFVEARVAFTRQLYAQLHQAAAVPGKDFPPGWGPDRSTLSPAAHTKAAQLGQKLSMGLEAAYQXXXXXXSKTTRGDLRSAI--RPEAWKRFLDRLARNGFFEGELEGSKRYREKISMAEQFVRNSVLHVDDGADEEVAAAQRDLRRCPVHEVVDRALSSADRDNMLEPSVEE-----DDKEDWLEVSQADLDIMLQDYRRAEVRDTWKNCRRRSDGGVVGGDHEQ 1684
            ++ A  ED ++YQ+F    G        EHL  L + VL  V    T +IW  ++F L      +G L  H+ G    G +V DEWF+ YLL  IT  FP L A V D+DGEFLLIE A  +P +L+P  S +RV++  G++H++           P+ +   +  V++ L  +  S     A   +   +R+R  GYP + K S+H A CF+P  +A+ +   P LVAPAV AF    Y    L ++  R +   P                       V   V FTR LYAQL Q    P  D   G+   R +     H KA +LG KL+ G E          SK +  ++ SA+   P+ WK F++ L RNG+F+GE+EGS RYRE    AE F R SV      +              P  E++ + L S    NM E   +E     +D + WL++++ +L+ MLQ+    +V    ++ R  +  G VGG  E+
Sbjct:    5 QRRAVEEDTVQYQLFVIQGGDSNLNQAEEHLSHLLEEVLAKVAPLLTHYIWQHQSFNLKYHSE-KGGLPAHIGGSTQFGDSVEDEWFIVYLLQQITEAFPELAARVEDNDGEFLLIEVADFLPKWLNPDTSENRVFLHRGELHILPCLSHSSSVGFPKDV---TPTVTQALTLLSTSHQAFRATPKLCSALRKRFKGYPEKIKNSLHRAHCFIPAGIAVVLAQRPDLVAPAVSAF----YLRDPLDLQACRSIKTFPP-------------------DTRVLTSVTFTRCLYAQLQQQHFTP--DRRSGFMLPRCSHP---HYKAHELGMKLAHGFE-----ILCSKSKLSSSEVDSAVSCNPQ-WKGFMNSLKRNGYFQGEMEGSARYRELTKSAEHFFRQSVASTWSASS-------------PGEEIL-QLLHSCVPFNMEELKKQESQLPQEDSDSWLDITEHELEEMLQERSGGQVDACSQSHRATNSAGRVGGVQER 455
[Close]
BLAST of mRNA_P-littoralis_Contig153.81.4 vs. uniprot
Match: A0A218W048_PUNGR (protein ecdysoneless homolog n=2 Tax=Punica granatum TaxID=22663 RepID=A0A218W048_PUNGR)

HSP 1 Score: 199 bits (505), Expect = 9.930e-50
Identity = 161/492 (32.72%), Postives = 239/492 (48.58%), Query Frame = 2 
Query:  158 PGPSLEDFLATDPSHLPFLQEQPATAEDLIRYQIFADDWGSIE------HLQQLRKSVLQLVESSTTGFIWHREAFALSVAVPMEGDLEP-HLAGEQVVGGNVSDEWFVCYLLFTITSTFPTLTACVTDSDGEFLLIEAATAIPPFLSPANSNHRVWVRSGQVHLVMPGCMVDRARTPRTLGSGSIAVSEGLKAIRESDGGTEADEGVQRLIRRRIGGYPHEAKASMHHARCFLPLPVALAIRDTPGLVAPAVRAFCSGGYADKKLGVRMARLLVLPTGGSGANIAGNAPRGSQAGAPIFVEARVAFTRQLYAQLHQAAAVPGKDFPPGWGPDRSTLSPAAHTKAAQLGQKLSMGLEAAYQXXXXXXSKTTRGDLRSAIRPEAWKRFLDRLARNGFFEGELEGSKRYREKISMAEQFVRNSVLHVDDGADEEVAAAQRDLRRCPVHEVVDRALSSAD-RDNMLEPSVEEDDKEDWLEVSQADLDIMLQDYRR 1609
            P P +   L +DP    F +      +D + Y IF D   S         LQ LR  +L  V   T+ +IW  E F+LS++       EP HL G+   G N+ DEWFV +LLF IT  FP L+A V D+DGEFLLIEAA  +P +L+P+ S +RV++R G +H+V       + + P      S ++++ LK +  ++  + A + VQ  I+ RI  YP  A+ +MH AR  +P PVA  +R  P L++ AV  F        KL  +M + L               PRG +      V   V  +R +YAQL Q      K +P    P RS +      + A+LG K+S GLE AYQ      ++          R  AW+ + + L   G+F+G L GSK YR  +  AE++ RNS L +   A E ++A    +RR  + E+     S+ D R   + PS    D + WL   + +L+  L++  +
Sbjct:    4 PPPPMPPALDSDPFASIFSRNGSRLPDDTVFYAIFPDASLSSPAPDLSLRLQSLRHDILAAVSPFTSSYIWQHEPFSLSISSSSSTAAEPLHLHGKLRYGDNLEDEWFVVFLLFHITRKFPDLSARVWDTDGEFLLIEAAFHLPRWLNPSTSLNRVFIRRGDLHIV------PKTKIP------SPSITDSLKFLIANENESRAADPVQAAIKSRISDYPDRARRNMHRARVRVPPPVAQVLRQEPCLISVAVEGFYDRDIDSMKLASKMEKFL---------------PRGRE---EELVPVSVTMSRAMYAQLVQQTFQAPKCYPM---PSRSDIKAY---QEAELGMKISCGLEMAYQLRRREGAEG---------RGSAWEEYKESLESIGYFDGLLPGSKEYRRLMEKAEEYYRNSSLFLR--ACETMSAP---VRR--IDEIFSLPYSADDFRTEEVPPS----DDDSWLYNGEDELNSALREREK 439
[Close]
BLAST of mRNA_P-littoralis_Contig153.81.4 vs. uniprot
Match: A0A7K9YI61_9GALL (ECD protein (Fragment) n=3 Tax=Odontophoridae TaxID=224313 RepID=A0A7K9YI61_9GALL)

HSP 1 Score: 196 bits (498), Expect = 5.750e-49
Identity = 148/461 (32.10%), Postives = 219/461 (47.51%), Query Frame = 2 
Query:  236 EDLIRYQIFA-DDWGSIEHLQQLRKSVLQLVESSTTGFIWHREAFALSVAVPMEGDLEPHLAGEQVVGGNVSDEWFVCYLLFTITSTFPTLTACVTDSDGEFLLIEAATAIPPFLSPANSNHRVWVRSGQVHLVMPGCMVDRARTPRTLGSGSIAVSEGLKAIRESDGGTEADEGVQRLIRRRIGGYPHEAKASMHHARCFLPLPVALAIRDTPGLVAPAVRAFCSGGYADKKLGVRMARLL-VLPTGGSGANIAGNAPRGSQAGAPIFVEARVAFTRQLYAQLHQAAAVPGKDFPPGWGPDRSTLSPAAHT--KAAQLGQKLSMGLEAAYQXXXXXXSKTTRGDLRSAIRPEAWKRFLDRLARNGFFEGELEGSKRYREKISMAEQFVRNSVLHVDDGADEEVAAAQRDLRRCPVHEVVDRALSSADRDNMLEPSVEEDDKEDWLEVSQADLDIMLQDYR 1606
            ED +RY++FA    G  E L++    +   +      +IW R+ F L   VP  GD+  H+ G  + G NV DEWFV YL+  I+  FP L A V D+DG+FLLIEAA  +P +LSP NS +RV+   G++H++ P    +       + + S+ +SE L  +        A E ++R + +RI GYP + +AS H A C+LP  +   ++  P LVA AV+AF    Y      +R  R     P                       V   V FT+ LYAQL Q    P  D   G+     TL   +H   KA +LG KL+ G E          SK +    R+  R   W+R+L  L    +F+GE+EGS +Y E + MA+Q+ +  V   +   +E        L +    +V +    +A     L P    +D + WLE+S  DL+ ML++ R
Sbjct:   11 EDAVRYRLFAVPGAGGAERLRRCADGIAVRLAPLLAAYIWQRQRFRLRY-VPARGDVPEHVGGSTLFGDNVEDEWFVVYLVREISRAFPELVASVDDNDGQFLLIEAADFLPKWLSPENSENRVFFYKGELHIIPPS---ETEEQQWDVSAESLTISEALALLSARSEEFLAAEPIRRAVYKRISGYPEKIQASYHRAHCYLPAGIVAVLKQRPSLVAAAVQAF----YLRDPTDLRACRSFHTFPP-------------------EERVMTIVTFTKCLYAQLVQQKFAP--DRRSGY-----TLPLPSHPQYKAYELGMKLAHGFE----ILCSKCSKMSPDVERNVFRGPLWERYLSSLKEKDYFKGEMEGSGKYLELLCMAQQYFQECVNKPESFVEESPGDEILTLLQTTTFDVKEFEREAA----CLPP----EDDDSWLEISSDDLEQMLKEAR 425
[Close]
BLAST of mRNA_P-littoralis_Contig153.81.4 vs. uniprot
Match: UPI001C4CB8CD (protein ecdysoneless homolog n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4CB8CD)

HSP 1 Score: 196 bits (498), Expect = 8.610e-49
Identity = 153/482 (31.74%), Postives = 223/482 (46.27%), Query Frame = 2 
Query:  218 EQPATAEDLIRYQIFADDWGSI------EHLQQLRKSVLQLVESSTTGFIWHREAFALSVAVPMEGDLEPHLAGEQVVGGNVSDEWFVCYLLFTITSTFPTLTACVTDSDGEFLLIEAATAIPPFLSPANSNHRVWVRSGQVHLVMPGCMVDRARTPRTLGSGSIAVSEGLKAIRESDGGTEADEGVQRLIRRRIGGYPHEAKASMHHARCFLPLPVALAIRDTPGLVAPAVRAFCSGGYADKKLGVRMARLL-VLPTGGSGANIAGNAPRGSQAGAPIFVEARVAFTRQLYAQLHQAAAVPGKDFPPGWGPDRSTLSPAAHT--KAAQLGQKLSMGLEAAYQXXXXXXSKTTRGDLRSAIRPEAWKRFLDRLARNGFFEGELEGSKRYREKISMAEQFVRNSVLHVDDGADEEVAAAQRDLRRCPVHEVVDRALS----SADRDNMLEPSVEEDDKEDWLEVSQADLDIMLQDYR--RAEV 1618
            ++  T ED ++Y++F+     +      EHL  L + +L         +IW  ++F L      +G +  H+ G    G NV DEWF+ YLL  IT  FP L A V D+DGEFLLIEAA  +P +L+P NS +RV++  G++H++           P+ +      V + L  +       +A   ++  +R+R+ GYP + K  +HHA CF+P  VA+ +   P LVAPAV AF    Y    + ++  R     P                       V   V FTR LYAQL Q    P  D   G+     TL P +H   KA +LG KL+ G E          S+    D   +  P+ WK F+D L RNG+F GELEGS  +RE    AE F + SV             A +     P  EV+    S    S +     E  + ++D + WL+++  DL+ MLQ+    RA+V
Sbjct:    5 QRTVTQEDAVQYKLFSVQKDGLTSQQNEEHLTHLVEEILTKFAPLLMQYIWQHQSFNLKYHSE-KGGVPAHIGGSTQFGDNVEDEWFIVYLLQQITEAFPELAARVEDNDGEFLLIEAADYLPKWLNPDNSENRVFLYKGELHILPCPSKSSPVGVPKDV---VPTVPQALALLSTHPEACQASPKIRSALRKRLEGYPEKIKTGLHHAHCFIPSNVAMVLAQRPDLVAPAVSAF----YLRDPVDLQACRSFKTFPP-------------------DTRVLTSVTFTRCLYAQLQQQQFTP--DRRSGF-----TLPPRSHPQYKAHELGMKLAHGFEILCSKCRLPSSEP---DAPVSCNPQ-WKGFMDSLKRNGYFRGELEGSAHHRELTRSAENFFKQSV-------------ASKSSALSPGEEVLQLLHSCSAFSLEELKKQESQLPQEDSDSWLDITTQDLERMLQERSGGRADV 435
[Close]
BLAST of mRNA_P-littoralis_Contig153.81.4 vs. uniprot
Match: UPI001E8A3927 (protein ecdysoneless homolog n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI001E8A3927)

HSP 1 Score: 195 bits (496), Expect = 1.020e-48
Identity = 146/473 (30.87%), Postives = 237/473 (50.11%), Query Frame = 2 
Query:  227 ATAEDLIRYQIF--ADDWGSIEHLQQLRKSVLQLVESS----TTGFIWHREAFALSVAVPMEGDLEPHLAGEQVVGGNVSDEWFVCYLLFTITSTFPTLTACVTDSDGEFLLIEAATAIPPFLSPANSNHRVWVRSGQVHLVMPGCMVDRARTPRT---LGSGSIAVSEGLKAIRESDGGTEADEGVQRLIRRRIGGYPHEAKASMHHARCFLPLPVALAIRDTPGLVAPAVRAFCSGGYADKKLGVRMARLLVLPTGGSGANIAGNAPRGSQAGAPIFVEARVAFTRQLYAQLHQAAAVPGKDFPPGWGPDRSTLSPAAHT--KAAQLGQKLSMGLEAAYQXXXXXXSKTTRGDLRSAIRPEAWKRFLDRLARNGFFEGELEGSKRYREKISMAEQFVRNSVLHVDDGADEEVAAAQRDLRRCPVHEVVDRALSSADRDNMLEP--SVEEDDKEDWLEVSQADLDIMLQDYR 1606
            A  ED ++YQ+F       + EH Q++ +S ++ + +        +IW  + F L    P +GD+  H+ G    G N+ DEWF+ YL+  IT  FP L A V D+DGEFLLIEAA  +P +L+P  S +RV+   G++      C++   +TP     L + +  +S+ LK +        A + ++  I +RI GYP + +  +H A+C+LP+  A  ++  PGLV+ AV+AF    Y    + ++  R+  +             P  S+      +   V FTR LYAQL Q + VP  D   G+     +L P +H   KA +LG KL+ G E          S T     + A   + W  FLD L +N +F+GELEGS +Y +K+ MAE + + ++ +            Q  + R P  E++   L +A+ ++  +   S+  +D EDWLE++   L+ +L++ R
Sbjct:    7 AAVEDAVQYQLFLLTHKQETSEHHQEILQSYIEKILAHFAPILVSYIWQNQPFTLKYK-PAKGDVPAHIGGLTKFGDNIEDEWFIVYLIKEITKEFPELAARVDDNDGEFLLIEAADYLPKWLNPETSVNRVFFHCGEL------CIIPIPKTPEKETLLPATNPTISQALKLLSTHSADFVAAKSIRATIYKRISGYPEKIQTYLHRAQCYLPIGAAAVLKQRPGLVSAAVQAF----YLRDPIDLKACRIFKV------------FPPESR------LMTSVTFTRCLYAQLVQQSFVP--DRRSGY-----SLPPRSHPEYKAYELGMKLAHGFE----ILCSKCSSTFHDPKKHATSGQLWDNFLDSLKKNNYFQGELEGSAQYLDKLHMAEIYFKQTLSN-----------PQSSVVRSPGEEILS-ILKAANLEDFGKEACSLPPEDDEDWLEITPDSLEQILKEAR 427
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig153.81.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8Q8_ECTSI0.000e+068.73Similar to Ecdysoneless homolog (Drosophila) n=2 T... [more]
A0A836CNJ5_9STRA1.960e-7534.99SGT1 protein-domain-containing protein (Fragment) ... [more]
A0A2I0K1W3_PUNGR5.700e-5132.72Uncharacterized protein n=1 Tax=Punica granatum Ta... [more]
A0A6J2WJ44_CHACN6.810e-5131.39protein ecdysoneless homolog n=1 Tax=Chanos chanos... [more]
A0A3B4EE71_PYGNA3.210e-5032.98Ecdysoneless cell cycle regulator n=2 Tax=Serrasal... [more]
UPI00147184D83.290e-5032.21protein ecdysoneless homolog n=1 Tax=Thalassophryn... [more]
A0A218W048_PUNGR9.930e-5032.72protein ecdysoneless homolog n=2 Tax=Punica granat... [more]
A0A7K9YI61_9GALL5.750e-4932.10ECD protein (Fragment) n=3 Tax=Odontophoridae TaxI... [more]
UPI001C4CB8CD8.610e-4931.74protein ecdysoneless homolog n=1 Tax=Plectropomus ... [more]
UPI001E8A39271.020e-4830.87protein ecdysoneless homolog n=1 Tax=Sphaerodactyl... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig153contigP-littoralis_Contig153:290529..305818 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8Q8
Preferred nameECD
PFAMsSGT1
Model size3896
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000375,GO:0000377,GO:0000398,GO:0001654,GO:0001655,GO:0001700,GO:0001745,GO:0002009,GO:0002164,GO:0002165,GO:0002168,GO:0002376,GO:0002520,GO:0003006,GO:0003674,GO:0003712,GO:0003713,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006066,GO:0006109,GO:0006110,GO:0006139,GO:0006140,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006396,GO:0006397,GO:0006629,GO:0006694,GO:0006697,GO:0006725,GO:0006807,GO:0006996,GO:0007030,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007390,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007442,GO:0007443,GO:0007458,GO:0007591,GO:0008150,GO:0008152,GO:0008202,GO:0008205,GO:0008258,GO:0008283,GO:0008362,GO:0008380,GO:0008610,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009608,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009987,GO:0010256,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010628,GO:0010817,GO:0016043,GO:0016070,GO:0016071,GO:0016125,GO:0016126,GO:0016319,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030808,GO:0030811,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0034754,GO:0035035,GO:0035239,GO:0035295,GO:0040003,GO:0042180,GO:0042181,GO:0042303,GO:0042325,GO:0042335,GO:0042445,GO:0042446,GO:0043021,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043467,GO:0043470,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044877,GO:0045455,GO:0045456,GO:0045893,GO:0045935,GO:0045944,GO:0046165,GO:0046483,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048542,GO:0048546,GO:0048565,GO:0048592,GO:0048598,GO:0048609,GO:0048619,GO:0048729,GO:0048731,GO:0048732,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051193,GO:0051196,GO:0051252,GO:0051254,GO:0051341,GO:0051353,GO:0051704,GO:0051707,GO:0051726,GO:0055123,GO:0060255,GO:0060322,GO:0060429,GO:0060562,GO:0061326,GO:0061333,GO:0061525,GO:0062012,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070990,GO:0071704,GO:0071840,GO:0072001,GO:0072002,GO:0080090,GO:0090304,GO:0090596,GO:0097659,GO:0140110,GO:1900371,GO:1900542,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1901987,GO:1901990,GO:1902652,GO:1902653,GO:1902680,GO:1902806,GO:1903218,GO:1903220,GO:1903506,GO:1903508,GO:1903578,GO:2000045,GO:2000112,GO:2001141,GO:2001169
Exons15
Evalue0.0
EggNOG OGsKOG2406@1|root,KOG2406@2759|Eukaryota
Descriptiontranscription coactivator activity
Cds size2688
COG categoryO
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig153.81.4prot_P-littoralis_Contig153.81.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig153 290641..304578 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789733.6408825-UTR-P-littoralis_Contig153:290528..2906401680789733.6408825-UTR-P-littoralis_Contig153:290528..290640Pylaiella littoralis U1_48UTRP-littoralis_Contig153 290529..290640 +
1680789733.8505487-UTR-P-littoralis_Contig153:304578..3053171680789733.8505487-UTR-P-littoralis_Contig153:304578..305317Pylaiella littoralis U1_48UTRP-littoralis_Contig153 304579..305317 +
1680789733.862388-UTR-P-littoralis_Contig153:305461..3058181680789733.862388-UTR-P-littoralis_Contig153:305461..305818Pylaiella littoralis U1_48UTRP-littoralis_Contig153 305462..305818 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789733.6662943-CDS-P-littoralis_Contig153:290640..2908261680789733.6662943-CDS-P-littoralis_Contig153:290640..290826Pylaiella littoralis U1_48CDSP-littoralis_Contig153 290641..290826 +
1680789733.6815994-CDS-P-littoralis_Contig153:297827..2980301680789733.6815994-CDS-P-littoralis_Contig153:297827..298030Pylaiella littoralis U1_48CDSP-littoralis_Contig153 297828..298030 +
1680789733.70318-CDS-P-littoralis_Contig153:298616..2987061680789733.70318-CDS-P-littoralis_Contig153:298616..298706Pylaiella littoralis U1_48CDSP-littoralis_Contig153 298617..298706 +
1680789733.720369-CDS-P-littoralis_Contig153:299171..2992861680789733.720369-CDS-P-littoralis_Contig153:299171..299286Pylaiella littoralis U1_48CDSP-littoralis_Contig153 299172..299286 +
1680789733.731555-CDS-P-littoralis_Contig153:299508..2996301680789733.731555-CDS-P-littoralis_Contig153:299508..299630Pylaiella littoralis U1_48CDSP-littoralis_Contig153 299509..299630 +
1680789733.7450573-CDS-P-littoralis_Contig153:299778..3000721680789733.7450573-CDS-P-littoralis_Contig153:299778..300072Pylaiella littoralis U1_48CDSP-littoralis_Contig153 299779..300072 +
1680789733.7551513-CDS-P-littoralis_Contig153:300367..3004641680789733.7551513-CDS-P-littoralis_Contig153:300367..300464Pylaiella littoralis U1_48CDSP-littoralis_Contig153 300368..300464 +
1680789733.7671196-CDS-P-littoralis_Contig153:300689..3008511680789733.7671196-CDS-P-littoralis_Contig153:300689..300851Pylaiella littoralis U1_48CDSP-littoralis_Contig153 300690..300851 +
1680789733.777193-CDS-P-littoralis_Contig153:301295..3014631680789733.777193-CDS-P-littoralis_Contig153:301295..301463Pylaiella littoralis U1_48CDSP-littoralis_Contig153 301296..301463 +
1680789733.791319-CDS-P-littoralis_Contig153:301883..3019831680789733.791319-CDS-P-littoralis_Contig153:301883..301983Pylaiella littoralis U1_48CDSP-littoralis_Contig153 301884..301983 +
1680789733.801634-CDS-P-littoralis_Contig153:302269..3025641680789733.801634-CDS-P-littoralis_Contig153:302269..302564Pylaiella littoralis U1_48CDSP-littoralis_Contig153 302270..302564 +
1680789733.8115246-CDS-P-littoralis_Contig153:303080..3035341680789733.8115246-CDS-P-littoralis_Contig153:303080..303534Pylaiella littoralis U1_48CDSP-littoralis_Contig153 303081..303534 +
1680789733.821375-CDS-P-littoralis_Contig153:303865..3040371680789733.821375-CDS-P-littoralis_Contig153:303865..304037Pylaiella littoralis U1_48CDSP-littoralis_Contig153 303866..304037 +
1680789733.833775-CDS-P-littoralis_Contig153:304348..3045781680789733.833775-CDS-P-littoralis_Contig153:304348..304578Pylaiella littoralis U1_48CDSP-littoralis_Contig153 304349..304578 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig153.81.4

>prot_P-littoralis_Contig153.81.4 ID=prot_P-littoralis_Contig153.81.4|Name=mRNA_P-littoralis_Contig153.81.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=896bp
MSSAEEDWFANLSNNPGPSLEDFLATDPSHLPFLQEQPATAEDLIRYQIF
ADDWGSIEHLQQLRKSVLQLVESSTTGFIWHREAFALSVAVPMEGDLEPH
LAGEQVVGGNVSDEWFVCYLLFTITSTFPTLTACVTDSDGEFLLIEAATA
IPPFLSPANSNHRVWVRSGQVHLVMPGCMVDRARTPRTLGSGSIAVSEGL
KAIRESDGGTEADEGVQRLIRRRIGGYPHEAKASMHHARCFLPLPVALAI
RDTPGLVAPAVRAFCSGGYADKKLGVRMARLLVLPTGGSGANIAGNAPRG
SQAGAPIFVEARVAFTRQLYAQLHQAAAVPGKDFPPGWGPDRSTLSPAAH
TKAAQLGQKLSMGLEAAYQACYESCSKTTRGDLRSAIRPEAWKRFLDRLA
RNGFFEGELEGSKRYREKISMAEQFVRNSVLHVDDGADEEVAAAQRDLRR
CPVHEVVDRALSSADRDNMLEPSVEEDDKEDWLEVSQADLDIMLQDYRRA
EVRDTWKNCRRRSDGGVVGGDHEQDGSYFRSAYAASSVTDEVAADERKKA
QESQAGFADAVDGLDDIVSGMNAFVDDSRAGLDGAEVEPVGGHVQFDVDK
FMSLLNGEDLMSALEDAAKEGGNADLHESDDDLLESSEEEDDDDMEQGPQ
RMPEPRGFKARPEDSSVSGSRNHSNSTCDVPGDIPTEKGDRGDGVKGRNY
HVRTRVGTRPSVAFQMQEMEGRPREEDDQDASLEESDAQRQDGGRESKGD
TGSTENFVRDYMAAMEAELDPSTIGQSFEKVGDTISKAQMEELQTVGPLD
QNTGRAEEWLRQGAAHSSTSEGDEPDHEPDKASDMPAEDYKPVDVDMNMV
KHLLESTVSQGGLSGPASNLLRSMGLSFPSVPVGGAKNDTTVEEI*
back to top

mRNA from alignment at P-littoralis_Contig153:290529..305818+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig153.81.4 ID=mRNA_P-littoralis_Contig153.81.4|Name=mRNA_P-littoralis_Contig153.81.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=15290bp|location=Sequence derived from alignment at P-littoralis_Contig153:290529..305818+ (Pylaiella littoralis U1_48)
CTGGTTGTCTCAGTCGTTGTGTTAGTTCCTGCCAAGCCCACAGCCGTTCT
ACTTGGGGCGTGGCTGTTCGATTTTTAGTCCTCACCCTGCTGAGTGTAAC
ATAATTTCGCTGATGTCTTCAGCAGAGGAAGACTGGTTCGCCAACTTGTC
GAACAATCCCGGTCCGAGCCTGGAGGATTTTCTCGCTACCGACCCTTCGC
ACTTGCCCTTTCTACAAGAACAGCCGGCAACAGCGGAAGACTTGATACGA
TATCAAATATTCGCTGATGACTGGGGCTCCATTGAACATCTTCAGCAGGT
CAGTGCTAGCCGTGGAGAACCTTCACCAACAGAGCGTGCACCGGTCGTTG
TTTACTGCTGTCCATGGAGACACCCTGGACAGGCTATCTGAAGACGGCTA
ACATTTCTGTTATTATTTGATGCTGCTGTTACCGCTACGCCGTACATATT
TTGCAATAGCCGCAAGATGCGTTTGTTTCGTTGTTTGCAGCTGGTTGTTT
GGGCCCTGAATTGCTTGCAGTAGGAGTGTGAGAAATATGAGACTAACCCA
TTCCCCGTGTATTGTTCAGGAAGGGCATGTGTTAAGGCTCTTCTGGGTTT
AGTACAAAAAGAAAGAGGAAGAAAAGAGGGTTTGGAAACGAACGGCGTTT
AGGAAAAAAAAATGGGGAAACGACACAGGAGGGTGCGCACCCTGCTTATT
CTGCGACTCAGGCTGAATCTTATGGTCCCCGGAATTTTGGGCCCCGGATC
TCGAATCTCGTCGGACAAATATCGGTGGGCACAATGTATGTCAGCCCACC
TTATGGGAAAACGGATATTTTGCTGGCGCGGTATTTGCACACACATCGTC
CGGTTTCACATATAAATCACGTGCGTCATAGTGTGCAGCAGCGAGGGGCA
GGCCGCACCATCTCTCGACGATCACAGCAAAGAAAACACCACACACACAA
CACACACACACACACACGGTTGGTTGTGTGATGCTTCCTCCCACACACAC
ACAGCAAAAAAAGGGGTAGTAGAAGAGACGATCATACCGGGGAAATCGTT
GCTGCTGTCTGAAAAAACACAACAACAACAACAACAACAACACAATAACA
ACTACCATCGCGCTGTTGCCAGAAGAGCGACGAGCTCCGTATAATATCGT
TCGCTGCCTCCTGCCATCATACGTACGCGCTCGAACCAGGCCCCATATAT
ATCAAGGGTCGGGTGGGGTTTTGATTTTTTCGGTTGCAGTGTGCTCGGAG
ATGTCGTGTGCTCTCGTAGAACAGCAAAAGCTCGAATCCGTGAGCAATAA
TCCGCGGCTGTCTCGCGTCGGCTTTTTGGCCAAATATCCGAAGGAATAGC
CCCCGAATCGTTGTCTACGGATATTTTGCGCTCCGGAATCTCAAATTCCG
TGCCCATAAGGTGGTCCGAACAACAAATTTCTACGGAATGGAAGATCCGA
GGCCCAAATTTGGGGCCCATAAGATCCCGCCTAAGGGCGGCTATTAGACA
AAAAAACTGCGACGGAACTCGGAACGTGGAACTGAGAATTCCTCAGGATT
CCACGTTCCAAGTTCCAGTCGTTCTGTCTTGAGTGAAAAATCCTGTGCTG
GAATGCGGAACTTGGGAACATTAACCGAGGTGAAGAGCCCGGGACTGTGA
AGTCAAACTGCTGTGTGACGTGTAGCTGAATATGCTGCTCCTGCGTCATA
TCTGATGCATCACTGCTCCCGTTAACTTCACTCATCTATCTGTCTCACCA
CTCGAATCTCAGCGGTGTGGTCGCGGGGGGGACTGCTCTCTACGTGCTCT
GTTGCGTGGCTTTGTGCCCACACAAGCCACTCATGCCGCGTCGTGGTCGC
TGCTTGCCCTGTTTCTAAGGTGTAAAAATTTCTGCGAGAATTATTGCCCT
CAACCAGCCCGTTCCATGTGGGCTACTCGGCTCGCCCGTCGAGTCTCGAG
CCCGCGACAGGCGCGTCGAGTCAGAAATGTTTTGCTCGTCCAGGGTGCGA
ATTGTTTTCGGGAAAACGACACAACAGGGTGCACCCTGGTCATTCTGCGA
CTCAACAGGGTGCATGCTTTTCCCGAGCGTGAAACGAACCAAGCTGATTG
GTCAAACCTCGAAATCACCTTGTTGAGACGAAAAAGTGCCCGGGTGCACC
CGGCGAAGGCTAGTTTTCTTCAAAACTACACCCTGATTTTTGAAAAGCAC
CCTGTTGTGTCGGTAAATGAGACCCCATCCACCGGATATATTACTCCCGC
AGGAATCACTTTCCGCACCCGCCAAAGGGCATCAAATATGAGATCTTCCA
CCGCCAGACATACTACAATGGTAAACACAATTAATGAGTGCACTCACACC
ATGACTGGCACGACGGACCTACCGCATACCCCTCCACATCGACTCTTCAG
GCTCTAAGCATACAATGGCACACTGCTGTGCCAACAGATCAGAGCGCCGT
TGCCAGCAAACAAACTGCAGATCCGCCGACAGTAAACAGAGACCCAAGCC
CGAAACAGAACACATTTGTTGGCCCCGCTGCAAGCACTCGTAGAGCACAC
AAGAAGAACAGAAGTGGTGTTGGGCCTTCTGTGTGTCCTTGTATAAAGTA
AAGGGACAACGTGCGTCAAAGGTGGGTGTGTGCTTCCCTCTCTGTTCAGT
GTATCGATATCGGATGGGTCTCCCTCTCACAGCAGTCGACCTTTATGCCT
CCTGTTATGCGTGCCTTCTCATTCCAGTACTGTTTGCTCTCTGGTTCTGA
CGTCTACTTGTGTCTGCACTGCTGTGAGTCGCGTGTCCTGTCGTCACATG
TGTCCGTCTGTTGTACTGACTGTCTGGCAGTTGTGTGGCTACTTTGTCGT
TCTTTCTGCGTTCTTCTTGTGTGCTCTACGAGTGCTTGCAGCGGGGCCAA
CAAGTGTGTTCTGTTTCGGGCTGGGGTCTCTGTTTACTGTCGGCGGATCT
GCAGTTTGTTTGCTGGCAACGGCGCTCTGATCTGTTGGCACAGCAGTGTG
CCATTGTATCTTGAGAGCCTGAAGAGTCGATGTGGAAGGGTATGCGGTAG
GTCCGTCGTGCCGGTCATGGTGTGAGTGCACTTATTAATTGTGTTTACCA
TTGTAGTATGTCTGGCGGTGGAAGATCTCATATTTGATGCCCTTTGGCGG
GTGCGGAAAGTGATTCCTGCGGGAGTAATATATCCTGTGGAGGGGTCTCA
TTTACCGACACAACAGGGTGCTTTTCAAAAATCAGGGTGTAGTTCTGAAG
AAGAGTAGCCTTCGCCGGGTGCACCCGGGCACTTTTTCGTCTCAACAAGG
TGATTTCGAGGTTTGACCAATCAGCTTGGTTCGTTTCACGCTCGGGTAAA
GCATGCACCCTGTTGAGTCGCAGAATGACCAGGGTGCACCCTGTTGTGTC
GTTTCCCCCCCAAAAAAATCACTGGAACACAGACTAACTACTGTAGGGGA
TTTGAATAAATGCAGCTTTCTTCCCGGGACAGAAAGACTAGCAGGTAATC
ATCTATTTTTGGAGAATTTTGCGCGGTGAACCGAATTGTTAATCTCCGCC
AACTCAAAAGCTTCCGGATGTTTTTATCGCTTATGCAAGCCCGGTAAGCC
AGCTAAATTCGCGTCGAACCCGTCTGTGAATCGGGGATGCACACGCGGAG
AACAGCAGTTTCGCATCATCGCACCCAGCAGATCTCCCAGTGCGGTGCAA
TTTCTGGCCGCTGCATGCATCTAGACACAAAATCACAAGCTCCGAAGAAT
ACCTCTAAAATCGGTTTCTGACTGCCCGTTGCTGCTGTCAAGGCATGGGA
AGCGTCTCACCCACCACATCTATTGGCTGTGGCACTTTCGAGCAGTGTTG
TTGCTTGTGGCGAGCTTGCGCTGTCGTGAACTGAAGCACAGTTTTCTGGG
ATTTTTCACCGATATTCACCCGGGGAGATGATGCTCAAAACGTTAATTTC
GATCGTCCCGATCTCGTCCCACAAGGCCTAAACTGGTATGCGGCACAGTT
TTGATCCACTCAGGATCACAAGCCAAGGTGCTTCCTGCAAAAACATCGGG
AGGTTCTTGTCTCTGAACACAAACAGAGGAGGGGATGAGATGTGGAGTGT
ACAGCAGTCAGGGGGGCACGGCGAATGATTTTCTATCTACAAGTTGAAAG
AAAAAATGATACTAGTGGAGCAAAATTACGACGACGGAACCCCGGGATAC
CGGGATGGCGTCTCCCCCTTTCTTTTTGTGCTGAACCCAGCGGATCACCT
CTTTTAGATGTCTGCTCACCCATTCTTCGAAAAATCTGGCGTTTCATACC
TTCGGTGCTTGACAAAAAAAAACACAAAAAACACAAAAAACAAATTCAGC
ATACCCGGGGCCCCCCGTGTGCCTTTTGGCCGCGCGTATGGTGTGTATGA
TGCCATACATATGGTATGTACATGATAGGTTCCTGCGAGGGAACAAATGA
AGGATGCACCTGCAATAGCTGCGTGTTGATTATTTTGTCATCTGTGGAGG
TAGACACGCTGATCGATACCCCAACTCTGAATACTGCGCGACACCCCCTT
TTGCCTAAACATTCAACACCGACCCAGCACGACCCAACCTGACAGTACCC
TAACCTAACCTGACGGTTACCCTTACCCTAACTGTCAGGAGAAGAGGCGG
ATAGCTCGGTTGGTTGAGCAATTGGAAGGTGCTAGGTCGCTCTTTCAGCT
AAAGCCTTTGCAGTTTTTTTTCTTATTTGTTCCAATGGGGAACATATATC
ATACGCACGTGCGTACGAGAAATCGTGCTCTACTCTCTCCTTTTTCGGGC
TACGTATTTGTTTGACTCACAAGTGTAATTTCACAACTCCGACAGCGATT
CACACGCCGTTTTTTTCAGTGGATGGTGACAGCAGGGAATTGGCCATGTG
CCATGTGATCATTCGGTCAAACGTTTTTTTTGGGGGAAATGTGAAACGTC
ACAACAGCAGTGTATACCCCAGTCATTTTGCAACACGTGAGTGTACACAC
GTTGTTCAGCGTGTAAAAGGGCGGGGTATAATCCGCTGCGCCTACTTTTT
TCCAGAAACGTACCCTGTCCCGTCGGGAATGGAGACATTTCCATCGGCCA
TTTCGCCCGCAGGAATGACTTTTCGCTGAGACCAGAGGGCACCAAAATCC
AGATCTTCCTGCGCTCAACGTGCCATATAATGCAGACAATCGGTGCTGCT
GTGTTGCAGAGACGCTTCAAAAGCATGCCGTAAAGAGACACACACGACCG
ACCCCAGACGTTCCCAGAAGGCCCTCCAGCACCCTCTACGTGCAGCACTA
CCGATCCAGCAGCATGGTTGACACAAGAGTACGAAGTGCCGCAGAGTGCC
GCAGCACGACTGAGACACACGCAGAGTTCAAAACAGAGGGCCAAGAGAGG
CATGGTGTCACTCCGTCCAAACCAATACAAACGAAGCACCCTCTGCATCG
TAGTATTTTTTATTCATACTGCATCCGTTGCTGCAGGACGGGTAATCATT
ATTTACATGCGGTGAAGTCGGAAGCCTGCGAAGGGTTGCCAGGGCATACC
TTTCCGGTACAGCTAGGAAGCTGCCTGTGTTTGTGGCTACTGCTGTTAAT
TGTCGAATTTGTGAGACAAGAGCTCCTAGCACCTTGGTATGCTGGAAGAA
GTAACGCCAACAGCAGTACGCGTGCTAAGGGCCTTCCTTCTGAGAGCGTT
GGGGTCGGTCGTGTGTTTCCCTTTAATTTACGATGTATTTTTTGTGTCTC
TGCAACAAAGCAGCAGCAGCAGCAGTTGACTGTGTGTTTTCCTTTTGCCA
ATGTATCTCCCTCTTTCTCTTTGGTCATGTCATTTGTATTTGTATGTTTA
GAGCAGGAAGAATCGATGTAGAGGGTTGGAGGCAGATCCTCGCAGGTCCT
TGGTGATGGAATCCTACTGGTTACCATTGCATGTGTAGCGCCGGAAGATC
TGTATATTGGTGCCCTCTGGTGTAGGCGGAAAGTGATTCATGCGGGAGAA
ATGGCCGGGGTGGACGGTTCTCATTTCCCGACACAACAGGGTACATTTTC
AAAACCACGGTAGAAATCTGGGGGAAAAGTAGCCGCGGCGGGGTATAACC
CGCCCCTTTTCCGGCCCCGGAGGATGAAAGTGAGCGTCGACCAATCGGCT
TGGCTCATTTCACGCTAAAAAGAAGTGTGTACCCTGCTGTGTGCAAAATA
ACCAGGGTATACCGTGTTGTGACGTTTCCGCAATAATGTATACCCGGTAC
AGCAGTTCTGCAAAGCTCCAAACGTTAAAAATCGCCAAAATCTTCAGGAT
ACAGGGAATACGCCCCTTTCATGGAGCCTTGTTGTATGAATAAATGAAAT
CCTGTCGTAAATCAAGCCAAAACAGCTTATTTTGGTAATGCTGAATTATG
GTCTATTTGCGAGGAGTCCCAACCTGATTGTCATATCAGGAGGACACCAT
GCAGCAGCTGTGTATGTGTCGGCACGTTCGCGTGTGTCTGCACCAGCAGC
AGATCTGAACTGCCGACACATATTTACGTAGCTACTTCATTGTATCTTCT
ACTGATATCAACACCAAGGTCGGGACTTCTTGCACAACATACATCCTTTG
AACCTTATCCAAATAAGCTGTTTTGACTTGATTTTGGAGTTGCGGAAATG
TATCTTGATTCTAGTTGGAGGCAAAAAATGTGCGGTGTTATATGATACAG
TATATCCTTACGTTACTGTTAAGAAGCTGCACCTACCGCCGCTCTACGTG
ATACCAAACGGGCTTTTTCGTGCTCAACCCTTTCCTAAGGTGATTGTCGG
GTGCTCTCTGGTCTAGGTCACGACCCCAAAAAATCGAAAGACATTATGCC
AGCGGAGGTAGTCCCCGAATCGTTAAGATAGAGAATGCCCTCCTACGACA
TTCATCGGTGACGTCTTGAATTACGTTCAGAGGGTTCCATACGTACAGAG
TCCAGCCAAGATTTACACCTGTAGAAACCAAAGTCTGGCATCTCCCCAGC
ACAACTCTTGCCGGGTCTGACGAACCTCAACGGAGGATTTGATCACGTTT
TATCAAGGAACAGTCTACACAGCACAAGAACCGTCAAGTGCTGAGGGTGG
TATTCGAAATATCGAAATATCGAAATATCGAAATATCGAAATATTGAAAT
ATCTCGTCGCGGACTTTCCGTGCGTGTCTTTTGTTCACATTTACAGTGGT
TCACACGAATTCGTCGCGACAGTCTTGCCGCTGCAGCGCCCATTCCAACG
TAACCCATCTTTACGTTCGCAATGGCTTGCACTTATCGTCCGGCCACAGC
TGCGGAAATCGGTGCTGCAACTTGTGGAGTCGTCAACGACGGGCTTCATC
TGGCACCGTGAGGCGTTCGCACTGTCTGTTGCGGTGCCTATGGAAGGAGA
TTTGGAACCTCATCTCGCTGGAGAGCAAGTGGTCGGAGGCAATGTCTCCG
ACGAATGGTTTGTTTGCTACCTTCTGTTCACCATCACTTCGACATTCCCC
ACGTGAGTTGCCTGGCATAATTTGTGTTTGGGGAAAGGGAGTATCAGTTT
GTGGTTCCTCAGCGTAGTTTAATCTCCCCCCGAAAACCCCTATCCCTAGA
TACCCTGGAGGAATCACGTCGGGTCTCCGCCGACCAGGTAAACGTGCGTT
CATCAACGGCGAACGGCTGTGATATGTTTTTTCGCCAAGTTGCATGCAGG
GTAAGCCGCATCTCAACTGACGGTTTCGAGGTGGTCTTGAGCACCTTGTG
TGTTGTGTGTAGTTTCTGGTATGGATGAAAGCTTCAAGTTTCTTGAGTCA
TCTTCGGTATAGCATTTCCAGAGGCAGTCATGTACTACTGTACGAGTATG
AAACTTGCGTTGGGGTTGTCTACCAAGGATGACGGGTTGTCGCAAGACGA
CGGAATAGCTCTCGGCACCCCCCCCGCCACCGTCTACAGGTATGTTTTGG
TTGAAGACGAATTTCACACCAGCTGAGGTATCGCTCGTTGCTACCAGTGG
ACCATCGAAGTGTGCGATAAGTTTGCGATGCCGGCTCCATCACTTTAGCC
CCAACTTGTCGTGCATGGTGCCATGCTTGCCATCTCAGGTTGACGGCATG
CGTAACCGATAGTGACGGCGAATTCTTGCTGATCGAAGCAGCTACCGCGA
TCCCACCTTTCCTGTCCCCAGCCAATAGGTAAGACTCCGAGACGACGTAG
CCATGGGACTCTGGATGTCCTCGGGGCGGTGATGCAACGTTAGATATTCG
GCCGTGTGGGTATCCCTACAGCTAACGGGACCCTTCACTTTTGAAGCAGA
AGCGATGGACGCTCCAATGGTGTTAGCGTCACGTAGTGCTCCATGCTCTG
CCTGGCATCCTTACGGAATAACTATAATACAGCAGTCGTGGCCCCTGATA
AAGTGCGGTTGAAGTCGCCCAGCTCGGCTCGTCAAACCCGCTCTGGAATT
TTTTGTCGGGCCAGTCCTCGATTCTGCAGTTGCCATGTGTGTGAGAGATT
GAATTTACTCGGCACGACCAGCATTCCTCGCGGATTGCTGCAGGCAGGCG
TGCTCGCTCCCGTCGCGGATAATGTGCTCAACAGTTGACACGCGCTTCTC
GGTCGCCACAATCTACATGCACGATGTGTTCGGATTCTCTCAGCAACCAT
CGGGTGTGGGTCAGGTCTGGCCAGGTGCATTTGGTGATGCCTGGGTGCAT
GGTCGACAGAGCAAGAACGCCACGAACGCTTGGATCGGGCAGCATCGCCG
TCTCCGAGGTGCGATGAGCCGGTTGAGCTGCAGTCATGTCTTAGGCACGC
GCAAGGCGTGCTTGAGAAACTTGTGTGCATTTCGTTAGCTGCAAATACTC
TCGTATTGTGTGCTTGAACGTTGAATGAAGCTCGTGCCTCAAACAGCTAC
AATTGCGTCCAACCATTCGCGACACTATGTGTGGAGCGGCGCAGTCTTGA
TCAAGCGCACATGATCGTATGGCTGTGCAGGGTTTGAAAGCAATCCGAGA
AAGTGATGGAGGGACCGAAGCCGATGAAGGGGTTCAGCGGCTCATCAGGC
GCCGAATCGGAGGCTACCCACATGAAGCCAAGGCAAGCATGCACCATGCA
AGGTCAGTCGCTGACAAATACCTGCACTGCCGTTTTGAGCTGTTTGAAGT
CAGAGTAGAGGTGAAAGCCGCGTTGACCATTCACGGGGTGGATCAACACC
CACCCGGTAATTTTAACAGGAAAATCTTGCCCTCCTCGTCCTCTTTGCAG
GTGTTTCCTTCCCCTTCCTGTAGCCCTGGCAATCCGGGACACGCCCGGGC
TAGTGGCCCCGGCTGTGCGCGCTTTTTGCTCAGGGGGTTATGCAGATAAG
AAGTTGGGCGTCCGCATGGCTCGGCTGCTCGTCCTACCAACCGGTGGATC
CGGGGCCAATATTGCCGGAAATGCCCCACGCGGCTCGCAAGCAGGAGCCC
CTATTTTCGTAGAGGCTCGGGTCGCTTTCACCCGGCAGTTGTACGCTCAA
TTGCACCAGGCGGCTGCCGTTCCGGGCAAGGATTTCCCTCCAGGGTGAGA
GGTCACGCCCAAAGATGCAGAACCCCTTCCTTTACTGGGGTACCCAGAGC
TATTGTTAGGGATTTTCTGTGTGTTGGAATGATGCCCAAATTACTCGACT
TGAAAAAGTAGCCGAAAAGCACTCGACATTTTCACAGGAGTCATGCAGGT
CGCGGGTTGAGTTTAATTTTCCGCACTTTTCAATTGGACTTTCAAGTGGT
CTTCATGCTTGAGAAACATCACCCTCTTCCTCGCTAGCCGCCCGTCTGCT
TTTGACGTTGCTTGGCGTGTGGATGTCGGTGGCCGATAGGTGGGGCCCTG
ACCGAAGCACTCTTTCCCCCGCTGCCCACACGAAAGCCGCACAATTGGGA
CAGAAGCTCTCCATGGGCTTGGAGGCAGCCTACCAGGTAAACATCATTCG
GTGGCATAAACGAGACACTCTGATCGCCCAAGATTAGGGGGATGACCGGT
GTTGCGTGGTGCTCGTGGTGCAGACCTGGTACTGTCAGGTCTACTCACAC
TCCGGCGAATGGCAGTTTCTTCAATATCACTTGGCAAATGCGAAATGTAT
GTAATCAACGAGATATGCCCCTTCATCCATTATCGATACGTTTGGTCGAT
CTGCGGGCCAGGCGTGCTACGAGAGTTGCAGCAAAACTACACGAGGGGAC
TTGCGCAGCGCCATCAGACCAGAAGCGTGGAAACGGTTCCTTGATCGGTT
AGCGCGAAACGGATTTTTTGAGGGAGAGCTGGAGGGATCCAAACGGTATC
GAGAAAAAATATCAATGGCAGAGGTGAGCTTCAATCGATGTCCTATGGCA
GTGGTGGTGTACATCGTCGGTTCGGTCGGTTGCGCATCTACCAATGTCGC
TGGTGTTGCGGCGAGTAGTGCAAATGACGAGAGACAAAAGCAATACGATG
AATGCTGCTGGTTTGATACGGTGTGATGTGTGTCATTGCCCGTGGTCGTG
GATTCCAGGGTCTTTACCTCGGCGTTGTATACATGTACATTGGGAACTGC
ATTGTTCCTTTGCCTGTGTGAACGACCTAGCCTGCGGGTAGTGTTTTACC
TGTTGTCACTTAATCTAGCTCATCCTTGCAAGAAGTGTGACATCCTGTTG
CGAGAAAGTCGAAGCTTGTTCGGATCGTTGTGTATGTACTGTCTTGGCAT
TTGTTCTGACATTCACTGTTGTGCTGTGTGCGTCTGCTTCTTGTCCTGAT
GTAATCAACGCCCGCAGCAATTCGTCCGGAACAGTGTTCTGCATGTTGAC
GATGGTGCGGACGAGGAGGTCGCGGCCGCTCAGAGGGACCTCCGACGGTG
CCCTGTCCACGAAGTGGTCGACCGCGCGCTTAGTAGCGCGGACCGAGATA
ACATGTTGGAGCCTTCCGTCGAGGAAGATGACAAGGTCAACTGCTGTTTT
TTTCGTTTTTTCGCATGCAAATATTATCGTTGCAGAGTTGAGTCCACTTC
AATTCGAATGCCACAACGATTTCCGGTGCTGTGTGTTTTTATTCAGGCAG
CCGTGAAGAGATAAGTTCTCATTTGCTGGTAGAGTAGCCAGGCGCTGCGG
TAGGACTAAGTGGATCTGTCGTGGGGAAATCGCAGAGCACGTTGGAGCGT
GAGTAGCGAGGGAGGAGTTATTGTCGCGCTTGTGTGTGGCGCACTCTCCG
GGAGGGCGTGTGACAATGCTGGCGTTGCTGTTGTTTATCCCAAGGCATGT
CAAAGAGTAAACAGCCAAGTTTCCTTGAGTGATACTACATCTATCCATGC
GACGGTGAGCGTGTTAAATGATGTTTTGTGTCCCGCCTGCTTGTTTTTGA
AACAGGAAGACTGGTTGGAAGTTTCTCAGGCTGACTTGGATATCATGCTG
CAAGACTATCGACGCGCGGAGGTGAGGGATACCTGGAAAAATTGCCGACG
CCGAAGTGCTGTCTTTGCGTGAGAAGTAATTTTTACTCTTTTTAGGGGCA
TGAAGCTGCCAACATGCTTTGGCCTTTGCCTCGATCTGCTCACGCTGGTC
CCTTACTCGCCGGAACCTGTTTTTTCCCATGTATAGACACGTGCTGTGAC
ACAGCAGTGCGACACAACTGTAGGCCAGATGTAGTACCTGATGGTATAAC
GTGAAGTATGTATCATCCCTTTCAGTTGTAGCTCTGGTTAACTCAAGTGT
TACTTTGCACGCTGATGTGGTTTTGCAGGGGGAACCCGGAGGTGATGGGG
GTGTGGTCGGTGGTGACCATGAGCAGGACGGCTCATACTTCAGATCGGCA
TACGCAGCTAGCTCCGTCACTGATGAGGTAGCCGCAGACGAGAGAAAAAA
GGCCCAGGAAAGCCAAGCTGGTTTCGCAGACGCTGTGGATGGATTGGATG
ACATTGTCTCGGGCATGAATGCTTTCGTGGACGACTCGAGAGCGGGGTTG
GATGGTGCAGAGGTGGAACCAGTAGGGGGGCACGTCCAGTTCGACGTTGA
CAAGTTTATGAGTTTACTCAACGGGGAAGATCTGATGTGAGTCAACTTTT
CCAATTTGTGTTGTAAAGCACACGTACCGGAACCATTTTATGTTAAGCGC
CGGAAGATCTGTATTTTGGCTCTTTGGTGGTAGCAGGAAGTGATCCTGCG
GGAGAAATTACATATGGAAGGGTCTAATTTCCTCGTCACAACAGGGTATC
ATACATTTCCGAAAATCAGGGTACAATTTTGAAGAAAAAGTAGACTGCAG
GGTAAACCCAGCTCTGCGTCCCCGTCACAACAAGGTGAAATTAATGTGTC
AATAAACCGGCTTGGCTCATTTTACGCTGAAAAAAAGGGCGTACCCTATT
TCGTCGGCAAAGCGACCAAGATTAGCCTCTTGACTCGTTTCCCCTTTCGT
TTTTCACCTCATCTTGTGCACGTGATTTATTGGACGTGCAGAAATTTCAG
TGTTCGTTGTCAGAAGTACTCACAAGGACGTGAATCCCGCGGTTCGCGTG
TCGTGATGGATACATGTGCGAACTCTCCATGCGTCTTGCGTGATCGTTTC
AGGAGTGCACTTGAAGATGCGGCCAAAGAGGGTGGGAATGCTGACCTGCA
CGAGAGCGACGACGACCTCTTAGAATCTAGTGAGGAGGAAGACGATGATG
ACATGGAACAAGGCCCGCAGCGGATGCCTGAACCTCGAGGGTTCAAAGCG
CGACCGGAAGACTCCTCCGTGAGCGGATCTAGAAATCACTCCAACTCAAC
CTGCGACGTTCCTGGAGACATCCCTACGGAGAAGGGCGACCGAGGGGACG
GTGTCAAAGGCAGGAATTATCATGTTCGGACGAGGGTCGGCACGCGGCCA
TCCGTTGCATTCCAGATGCAAGAGATGGAAGGCCGACCTCGCGAAGAGGA
CGACCAAGACGCTAGTCTGGAGGAAAGCGATGCGCAACGGCAGGATGGCG
GGCGCGAAAGCAAAGGCGACACCGGAAGCACAGAAAATTTTGTTCGAGAC
TACATGGTGAGGGCCAGCCCACATGCGGCGATTTCATGGCCCAGTCTACG
TTTTTTTTTTAGTCGGTGGCACGCCAGCAGCCTGATGTTGAAGCCAAGAT
TTGACGCACTGATGTGTTTGTCTTATGGTCAACAGCATTTACTGCTCTTC
CGATCCAGCCGAGTTGCAGACGTGTTGGACATTTTCATGCGGCGTTTGTT
CTCCCCCATGATACGTCTTTTTTGTTTGGCATGACTGCTGTTTGTGTCCG
CTGCCACTCTTCGTAAATTACGCTCTCGGCAGCTTCCAGTGCCTTACGCT
TCCCCTTTATACCATGACTTTCCGCCGTTGATACTAGGCCGCAATGGAGG
CTGAATTGGACCCCTCGACCATCGGACAGAGCTTCGAGAAAGTGGGAGAT
ACCATCTCGAAGGCGCAGATGGAAGAATTGCAAACGGTTGGTCCGCTGGA
TCAGAACACTGGACGAGCTGAGGAATGGCTTCGGCAGGGCGCCGCGCATT
CATCGACAAGTACGATAACAATTTTTGAGTGCTCGTCGCACAGTCATGTG
GGATGTTCAGGTATCATATGCGCACAGAACCGTGGTTTTGATCGCCAACG
TGACTGTAGGAGGCCCTCCTGTGGCCATTCTGTGTACATGTTGCGCATCA
ACCCGTTTGTGGTGATGCGAGTTTCACTTGGGGTTGTGGGTGGCTTACCT
GAGGATACATTGAAGCACCATACTTGTTCGTCAGATGGGATTGTCTATGT
TTTGGTCACAGCGACGCACTTAATGCCGTCCTACCATCCTCTTTGCATGC
TTGTGTTGCCACTGTTTCAGGCGAAGGCGATGAGCCAGACCACGAGCCAG
ACAAAGCTTCCGACATGCCTGCTGAAGACTACAAACCTGTCGATGTGGAC
ATGAACATGGTCAAACACCTTCTCGAATCAACCGTCTCGCAGGGAGGGCT
GTCCGGTCCTGCCTCGAACTTGCTTCGGTCGATGGGTCTCAGCTTCCCTT
CAGTACCCGTTGGTGGAGCTAAAAACGATACCACGGTCGAAGAGATATGA
AAACAGCATTCCGTGTGCTGTGATATCGTGTATTTGGTCTGCGCGTCTAT
TGTTTTGGGCGCAATACTCGCCATCCAGTAAAGATACCTTGTAATTTATA
AACCCAAAAGACAAATGAGAGCTTCAGACAGAAAACTACCAGTAGATGAT
ATTGTAGGAATTGCCTCAACCGCCCGAAACATCCTTGCCGAGCTGCCCGG
GGAGTCCGCTGTCACCCTTTCTAACTTTGCTGCTTGTTGTGTTGTCCATT
GGAGAAGCAAGTCGACCCGGGAGCGTCTCAAAAGGTAAACCCGCAGAAAA
TCGCCCTGTGTCTTGGACGATATCTTGAAGTTGCTCCGGCGTGACGGCTT
GGTCCTCGTAGTAGCCTTGGTCAGCTTCGTCGTCGAACGCATCCAACAAT
TCTATGTCCATAACCAATTCTCCAGTCGTAGTTTTCTCGAACGATGTCAA
GACCTTTGGCGCCGAAACAGAGGAGTAAACGAATTTTCGACACTTGAGAA
GACGTTGCTTCAGAGCTTGTAAGGTACGAAGTATATTCTGAGGCCGGTAT
CTTTGGGAAACGTTTTTATCTTGATGAATTTGGAAGATAAATAAGATCTG
TGTAGAAAACCAAGCTAGTACGGAAGCAACGAACACTCACTTTTGTAAAA
TTTCTTGTTTGGTGATAACTTTTGTCGAGAACAAATGTTGAGGCCAAGAT
TCGCGTTCAGAAAGTAACTACGGATCTTGTCGGCATCAAGCCTCCCCCCC
TTCCCGCCCTCATCTGCCTTGACCTACGAAATCATCCACTTCGCTCTAAA
CGATGAACGAACGTGGAAGTTTGTGAGAAACTTCAGGCCAGCCGATCCGG
AGGAAATCTGTTCCCCAAGTTAAAAAATCGGAGAAACCTCGATTAAGGCC
CCCCTAACACGACGGGGCTTCGTGACTCCTCCGATCAACGTCAGCTCCCC
ACATGCAACCACAGGCAAGAAATCGATACAGCCGTTGATGTGGTTTGCGA
CGGGCGTCCTACAGCAGCAGCAGTAGTAGCCATACTGGTGGGGGGGGGAA
GCGAAGCCCAATTTCGAGCTTGAAAATATGGTGAAAAATGGATGCAGATC
TGGATAAATAGGTCCGTCTTCAACCAACAGAGCCTAGCGCAGAGGATACA
GCCCCGATCAGAAACGGATTTGACGCAAATTTAGCTGAGATATTTTCGTG
CTTTTGTGCATACCGTCGATGCTGTCGGCTCAAATTGCAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig153:290529..305818+

>mRNA_P-littoralis_Contig153.81.4 ID=mRNA_P-littoralis_Contig153.81.4|Name=mRNA_P-littoralis_Contig153.81.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2688bp|location=Sequence derived from alignment at P-littoralis_Contig153:290529..305818+ (Pylaiella littoralis U1_48)
ATGTCTTCAGCAGAGGAAGACTGGTTCGCCAACTTGTCGAACAATCCCGG
TCCGAGCCTGGAGGATTTTCTCGCTACCGACCCTTCGCACTTGCCCTTTC
TACAAGAACAGCCGGCAACAGCGGAAGACTTGATACGATATCAAATATTC
GCTGATGACTGGGGCTCCATTGAACATCTTCAGCAGCTGCGGAAATCGGT
GCTGCAACTTGTGGAGTCGTCAACGACGGGCTTCATCTGGCACCGTGAGG
CGTTCGCACTGTCTGTTGCGGTGCCTATGGAAGGAGATTTGGAACCTCAT
CTCGCTGGAGAGCAAGTGGTCGGAGGCAATGTCTCCGACGAATGGTTTGT
TTGCTACCTTCTGTTCACCATCACTTCGACATTCCCCACGTTGACGGCAT
GCGTAACCGATAGTGACGGCGAATTCTTGCTGATCGAAGCAGCTACCGCG
ATCCCACCTTTCCTGTCCCCAGCCAATAGCAACCATCGGGTGTGGGTCAG
GTCTGGCCAGGTGCATTTGGTGATGCCTGGGTGCATGGTCGACAGAGCAA
GAACGCCACGAACGCTTGGATCGGGCAGCATCGCCGTCTCCGAGGGTTTG
AAAGCAATCCGAGAAAGTGATGGAGGGACCGAAGCCGATGAAGGGGTTCA
GCGGCTCATCAGGCGCCGAATCGGAGGCTACCCACATGAAGCCAAGGCAA
GCATGCACCATGCAAGGTGTTTCCTTCCCCTTCCTGTAGCCCTGGCAATC
CGGGACACGCCCGGGCTAGTGGCCCCGGCTGTGCGCGCTTTTTGCTCAGG
GGGTTATGCAGATAAGAAGTTGGGCGTCCGCATGGCTCGGCTGCTCGTCC
TACCAACCGGTGGATCCGGGGCCAATATTGCCGGAAATGCCCCACGCGGC
TCGCAAGCAGGAGCCCCTATTTTCGTAGAGGCTCGGGTCGCTTTCACCCG
GCAGTTGTACGCTCAATTGCACCAGGCGGCTGCCGTTCCGGGCAAGGATT
TCCCTCCAGGGTGGGGCCCTGACCGAAGCACTCTTTCCCCCGCTGCCCAC
ACGAAAGCCGCACAATTGGGACAGAAGCTCTCCATGGGCTTGGAGGCAGC
CTACCAGGCGTGCTACGAGAGTTGCAGCAAAACTACACGAGGGGACTTGC
GCAGCGCCATCAGACCAGAAGCGTGGAAACGGTTCCTTGATCGGTTAGCG
CGAAACGGATTTTTTGAGGGAGAGCTGGAGGGATCCAAACGGTATCGAGA
AAAAATATCAATGGCAGAGCAATTCGTCCGGAACAGTGTTCTGCATGTTG
ACGATGGTGCGGACGAGGAGGTCGCGGCCGCTCAGAGGGACCTCCGACGG
TGCCCTGTCCACGAAGTGGTCGACCGCGCGCTTAGTAGCGCGGACCGAGA
TAACATGTTGGAGCCTTCCGTCGAGGAAGATGACAAGGAAGACTGGTTGG
AAGTTTCTCAGGCTGACTTGGATATCATGCTGCAAGACTATCGACGCGCG
GAGGTGAGGGATACCTGGAAAAATTGCCGACGCCGAAGTGATGGGGGTGT
GGTCGGTGGTGACCATGAGCAGGACGGCTCATACTTCAGATCGGCATACG
CAGCTAGCTCCGTCACTGATGAGGTAGCCGCAGACGAGAGAAAAAAGGCC
CAGGAAAGCCAAGCTGGTTTCGCAGACGCTGTGGATGGATTGGATGACAT
TGTCTCGGGCATGAATGCTTTCGTGGACGACTCGAGAGCGGGGTTGGATG
GTGCAGAGGTGGAACCAGTAGGGGGGCACGTCCAGTTCGACGTTGACAAG
TTTATGAGTTTACTCAACGGGGAAGATCTGATGAGTGCACTTGAAGATGC
GGCCAAAGAGGGTGGGAATGCTGACCTGCACGAGAGCGACGACGACCTCT
TAGAATCTAGTGAGGAGGAAGACGATGATGACATGGAACAAGGCCCGCAG
CGGATGCCTGAACCTCGAGGGTTCAAAGCGCGACCGGAAGACTCCTCCGT
GAGCGGATCTAGAAATCACTCCAACTCAACCTGCGACGTTCCTGGAGACA
TCCCTACGGAGAAGGGCGACCGAGGGGACGGTGTCAAAGGCAGGAATTAT
CATGTTCGGACGAGGGTCGGCACGCGGCCATCCGTTGCATTCCAGATGCA
AGAGATGGAAGGCCGACCTCGCGAAGAGGACGACCAAGACGCTAGTCTGG
AGGAAAGCGATGCGCAACGGCAGGATGGCGGGCGCGAAAGCAAAGGCGAC
ACCGGAAGCACAGAAAATTTTGTTCGAGACTACATGGCCGCAATGGAGGC
TGAATTGGACCCCTCGACCATCGGACAGAGCTTCGAGAAAGTGGGAGATA
CCATCTCGAAGGCGCAGATGGAAGAATTGCAAACGGTTGGTCCGCTGGAT
CAGAACACTGGACGAGCTGAGGAATGGCTTCGGCAGGGCGCCGCGCATTC
ATCGACAAGCGAAGGCGATGAGCCAGACCACGAGCCAGACAAAGCTTCCG
ACATGCCTGCTGAAGACTACAAACCTGTCGATGTGGACATGAACATGGTC
AAACACCTTCTCGAATCAACCGTCTCGCAGGGAGGGCTGTCCGGTCCTGC
CTCGAACTTGCTTCGGTCGATGGGTCTCAGCTTCCCTTCAGTACCCGTTG
GTGGAGCTAAAAACGATACCACGGTCGAAGAGATATGA
back to top