mRNA_P-littoralis_Contig153.70.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig153.70.1 vs. uniprot
Match: D7G8R1_ECTSI (Macro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8R1_ECTSI) HSP 1 Score: 332 bits (852), Expect = 4.600e-103 Identity = 204/323 (63.16%), Postives = 227/323 (70.28%), Query Frame = 1
Query: 70 KLMLARLGSIFSVVA-DMQGMFSAFAG-------RADLSPRGLFKLKGSSVLAISQGDLTRWKGDAIVNAANERMLGGGGVDGAIHRAAGGKLLDACHEVQPAPNSGGIRCPTGQARITPGFRLDAKFVIHTVGPVYNNKQVSAPLLRSAIKESLLLCKGKGLKSVAFPAISCGVYGYPAEEAAEIAIDTMLEFGEDIDLIEFVLFGKDTYVPFLAKASEKLETVENADREASPD-----KAQDEERPECNTEGAKTKSDGAVTAAAKSPSAGKAVGDTPEVGEKPRALSC-DAPAGATSEAQDANTVEPMSQEETCGALEGS 996
++ L + S++S+ A +GM S A R+ L R LFKLK SSVLAIS GDLT+WKGDA+VNAANE MLGGGGVDGAIHRAAG LL AC++V+P NS IRCPTG+ARITPGFRL AKFVIHTVGPVY NK+VSAPLLRSAIK SLLLCK G+KSVAFPAISCGVYGYPA EAAEIAIDTMLEF E IDLIEFVLFGKDTY PF+ KASEKL V+ D SPD KA P+ EGA + G V+ SAG A T E +KP C PAG TSE D VEPMSQEET G L+GS
Sbjct: 2 RVRLGLMNSLYSLFAGSTKGMVSMNARGAGSSRRRSGLPTRRLFKLKDSSVLAISGGDLTKWKGDAVVNAANEWMLGGGGVDGAIHRAAGRDLLKACYDVEP--NSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYENKEVSAPLLRSAIKNSLLLCKENGVKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYNPFMKKASEKLAVVKE-DSGGSPDDSNAPKASSTSEPKTVDEGAPNTASGEVSV-----SAGGAAAPTLEEKQKPEEPECAKPPAGPTSEEGD-GAVEPMSQEETFGTLDGS 315
BLAST of mRNA_P-littoralis_Contig153.70.1 vs. uniprot
Match: UPI0005FB6297 (macro domain-containing protein VPA0103 isoform X1 n=2 Tax=Jatropha curcas TaxID=180498 RepID=UPI0005FB6297) HSP 1 Score: 204 bits (518), Expect = 1.510e-56 Identity = 115/228 (50.44%), Postives = 150/228 (65.79%), Query Frame = 1
Query: 58 ISPRKLMLARLGSIFSVVADMQGMFSAFAGRADLSPRG---LFKLKGSSVLAISQGDLTRW----KGDAIVNAANERMLGGGGVDGAIHRAAGGKLLDACH---EVQPAPNSGGIRCPTGQARITPGFRLDAKFVIHTVGPVYNNKQVSAPLLRSAIKESLLLCKGKGLKSVAFPAISCGVYGYPAEEAAEIAIDTMLEFGEDIDLIEFVLFGKDTYVPFLAKASEKL 711
++ R L+ L S S+++ M+ + + +A G +F L SSVL I++GD+T+W DAIVN ANERMLGGGG DGAIHRAAG +LLDAC+ EVQP GIRCPTG+ARITPGF+L A VI+TVGP+Y+ A L++A + SL + K +K +AFPAISCGVYGYP EEAA ++I T+ EF +D+ + FVLF D Y +L KA E L
Sbjct: 56 LNKRLLLRLPLTSSSSIMSQMESS-AGVSTKASFDNGGDTTVFPLSSSSVLKINKGDITKWFVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELLDACYKVPEVQP-----GIRCPTGEARITPGFKLPASHVIYTVGPIYDTDSNPAASLKNAYRNSLTVAKDNNIKYIAFPAISCGVYGYPYEEAAAVSISTIKEFKDDLKEVHFVLFSDDIYNVWLKKAKELL 277
BLAST of mRNA_P-littoralis_Contig153.70.1 vs. uniprot
Match: A0A5C7GZP7_9ROSI (Macro domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7GZP7_9ROSI) HSP 1 Score: 200 bits (509), Expect = 2.590e-56 Identity = 106/189 (56.08%), Postives = 132/189 (69.84%), Query Frame = 1
Query: 169 GLFKLKGSSVLAISQGDLTRW----KGDAIVNAANERMLGGGGVDGAIHRAAGGKLLDACHEVQPAPNSGGIRCPTGQARITPGFRLDAKFVIHTVGPVYNNKQVSAPLLRSAIKESLLLCKGKGLKSVAFPAISCGVYGYPAEEAAEIAIDTMLEFGEDIDLIEFVLFGKDTYVPFLAKASEKLETVE 723
G+FKL +L IS+GD+++W DAIVN ANERMLGGGG DGAIHRAAG +L +AC++V P SG +RCPTG+ARITPGF+L A VIHTVGP+Y+ A LLRS+ K SL + K ++ +AFPAISCGV+GYP EEAA +AI T+ EF D + FVLF D Y +L KA E L+ E
Sbjct: 15 GIFKLSDCCLLKISEGDISQWFINGSSDAIVNPANERMLGGGGADGAIHRAAGPQLREACYKV-PEVRSG-VRCPTGEARITPGFKLPASHVIHTVGPIYDVHSNPAALLRSSYKNSLSVAKENNIQYIAFPAISCGVFGYPFEEAATVAISTIKEFANDFKEVHFVLFADDIYSVWLKKAKELLQAQE 201
BLAST of mRNA_P-littoralis_Contig153.70.1 vs. uniprot
Match: A0A1R3J5B3_9ROSI (Appr-1-p processing n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3J5B3_9ROSI) HSP 1 Score: 199 bits (505), Expect = 7.720e-56 Identity = 108/195 (55.38%), Postives = 134/195 (68.72%), Query Frame = 1
Query: 142 AGRADLSPRGLFKLKGSSVLAISQGDLTRW----KGDAIVNAANERMLGGGGVDGAIHRAAGGKLLDACHEVQPAPNSGGIRCPTGQARITPGFRLDAKFVIHTVGPVYNNKQVSAPLLRSAIKESLLLCKGKGLKSVAFPAISCGVYGYPAEEAAEIAIDTMLEFGEDIDLIEFVLFGKDTYVPFLAKASEKLE 714
AGR D G FKL +S+L I++GD+T+W DAIVN AN++MLGGGG DGAIHRAAG +L DAC+EV GIRCPTG+ARITPGF+L A VIHTVGP+Y+ + LR+A K SL + K ++ +AFPAISCGVYGYP EEAA +AI T+ EF DI + FVLF + Y +L KA E L+
Sbjct: 5 AGRED----GHFKLSKTSLLKINKGDITKWFVDGSSDAIVNPANQKMLGGGGADGAIHRAAGPELRDACYEVPEVQP--GIRCPTGEARITPGFKLPASHVIHTVGPIYDYDKDPKASLRNAYKNSLTVAKENNIQYIAFPAISCGVYGYPFEEAATVAISTVKEFANDIKEVHFVLFEDEIYNIWLNKAKELLQ 193
BLAST of mRNA_P-littoralis_Contig153.70.1 vs. uniprot
Match: A0A2P5E0G5_PARAD (Macro domain containing protein n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5E0G5_PARAD) HSP 1 Score: 199 bits (506), Expect = 2.370e-55 Identity = 111/201 (55.22%), Postives = 132/201 (65.67%), Query Frame = 1
Query: 130 FSAFAGRADLSPRGLFKLKGSSVLAISQGDLTRW----KGDAIVNAANERMLGGGGVDGAIHRAAGGKLLDACHEVQPAPNSG-GIRCPTGQARITPGFRLDAKFVIHTVGPVYNNKQVSAPLLRSAIKESLLLCKGKGLKSVAFPAISCGVYGYPAEEAAEIAIDTMLEFGEDIDLIEFVLFGKDTYVPFLAKASEKLET 717
F A AG D R F L S L I +GDLT+W DAIVN ANERMLGGGG DGAIH+AAG LL AC+ V P G G+RCPTG+ARITPGFRL A VI TVGP+YN +A LRSA + L + K ++ +AFPAISCG+Y YP EEAA +AI T+ EF DI + FV+FG+D Y +L KA+E L T
Sbjct: 45 FGAGAGAGDGVAR--FPLSPSGSLVIRRGDLTKWFVDGSTDAIVNPANERMLGGGGADGAIHKAAGPDLLQACYSV---PEVGPGVRCPTGEARITPGFRLPASHVIFTVGPIYNGDPTAADSLRSAYRNCLKIAKENNIQYIAFPAISCGIYAYPFEEAATVAISTIKEFANDIKEVHFVMFGEDIYFVWLNKANELLNT 240
BLAST of mRNA_P-littoralis_Contig153.70.1 vs. uniprot
Match: A0A7S3BGY7_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BGY7_9VIRI) HSP 1 Score: 199 bits (507), Expect = 2.620e-55 Identity = 110/186 (59.14%), Postives = 126/186 (67.74%), Query Frame = 1
Query: 187 GSSVLAISQGDLTRWKG----DAIVNAANERMLGGGGVDGAIHRAAGGKLLDACHEV-QPAPNSGGIRCPTGQARITPGFRLDAKFVIHTVGPVYNNKQVSAPLLRSAIKESLLLCKGKGLKSVAFPAISCGVYGYPAEEAAEIAIDTMLEFGEDIDLIEFVLFGKDTYVPFLAKASEKLETVENA 729
G+ L + QGDLTRW G DAIVNAANERMLGGGGVDGAIHRAAG L AC EV Q AP G+RCPTG+ARIT GF L A VIHTVGP+Y + +VS PLL SA SL L LK VAFPAISCGV+GYP +AA +A+D D++ + FVLFG DTY FL A + + VE A
Sbjct: 16 GAQRLVLCQGDLTRWAGAAKPDAIVNAANERMLGGGGVDGAIHRAAGPALYAACKEVEQVAP---GVRCPTGEARITGGFELPAAHVIHTVGPIYESDEVSEPLLASAYASSLALANQSKLKEVAFPAISCGVFGYPQGDAAGVALDECARGVCDLEAVTFVLFGDDTYAAFLGAAEARFDAVEAA 198
BLAST of mRNA_P-littoralis_Contig153.70.1 vs. uniprot
Match: B9S4E3_RICCO (Protein LRP16, putative n=1 Tax=Ricinus communis TaxID=3988 RepID=B9S4E3_RICCO) HSP 1 Score: 199 bits (506), Expect = 5.730e-55 Identity = 109/223 (48.88%), Postives = 146/223 (65.47%), Query Frame = 1
Query: 64 PRKLMLARLGSIFSVVADMQGMFSAFAGRADLSPRGLFKLKGSSVLAISQGDLTRW----KGDAIVNAANERMLGGGGVDGAIHRAAGGKLLDACH---EVQPAPNSGGIRCPTGQARITPGFRLDAKFVIHTVGPVYNNKQVSAPLLRSAIKESLLLCKGKGLKSVAFPAISCGVYGYPAEEAAEIAIDTMLEFGEDIDLIEFVLFGKDTYVPFLAKASEKL 711
P+K + + S + S G D++ +F L SSVL I++GD+T+W DAIVN ANE+MLGGGG DGAIHRAAG +L+DAC+ EV+P GIRCPTG+ARITPGF+L A VIHTVGP+Y+ + SA +L++A + SL + K +K +AFPAISCGVY YP EEAA ++I T+ EF +DI + FVLF + + ++ KA E L
Sbjct: 51 PKKYLKNHIPLTSSHIMASSAGLSTNGGDTDINT-AVFPLSSSSVLKINKGDITKWFVDGSSDAIVNPANEKMLGGGGADGAIHRAAGPELVDACYKVPEVRP-----GIRCPTGEARITPGFKLPASHVIHTVGPIYDANRNSAAILKNAYRNSLSVAKDNNIKFIAFPAISCGVYLYPFEEAASVSISTIKEFADDIKEVHFVLFSDEIFNVWVKKAKELL 267
BLAST of mRNA_P-littoralis_Contig153.70.1 vs. uniprot
Match: A0A1D1YMJ3_9ARAE (Macro domain-containing protein XCC3184 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YMJ3_9ARAE) HSP 1 Score: 199 bits (505), Expect = 1.620e-54 Identity = 118/241 (48.96%), Postives = 145/241 (60.17%), Query Frame = 1
Query: 61 SPRKLMLARLGSIFSVVADMQGMFSAF----AGRAD----------------LSPRGLFKLKGSSVLAISQGDLTRW----KGDAIVNAANERMLGGGGVDGAIHRAAGGKLLDACHEVQPAPNSGGIRCPTGQARITPGFRLDAKFVIHTVGPVYNNKQVSAPLLRSAIKESLLLCKGKGLKSVAFPAISCGVYGYPAEEAAEIAIDTMLEFGEDIDLIEFVLFGKDTYVPFLAKASEKL 711
SPR L R +I S +A F+A AGR D G F++ SSVL I +GD+T W DAIVNAANERMLGGGGVDGAIHRAAG +LL ACH+V G+RCPTG+ARITP FRL VIHTVGP+Y+ + LRSA + L L K +G++ +AFPA+SCGVYGYP +EA++IAI ++EF D + FVLF DTY +L A E L
Sbjct: 54 SPRNLQTVRFRTIVSRMAGNGRQFAAVPSSGAGRGDGGSAARVSASTPPDRANGEAGRFQVSPSSVLNIRKGDITVWFVDGSTDAIVNAANERMLGGGGVDGAIHRAAGPELLAACHDVPEVLP--GVRCPTGKARITPAFRLPVSHVIHTVGPIYDADKQPDVSLRSAYRSCLRLAKDEGIQYIAFPAVSCGVYGYPYKEASKIAISEVMEFSNDFKEVHFVLFSDDTYKVWLETARELL 292
BLAST of mRNA_P-littoralis_Contig153.70.1 vs. uniprot
Match: UPI00053C2005 (uncharacterized protein LOC104824360 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C2005) HSP 1 Score: 198 bits (503), Expect = 1.630e-54 Identity = 110/210 (52.38%), Postives = 136/210 (64.76%), Query Frame = 1
Query: 103 SVVADMQGMFSAFAGRADLSPRG---LFKLKGSSVLAISQGDLTRWK----GDAIVNAANERMLGGGGVDGAIHRAAGGKLLDACHEVQPAPNSGGIRCPTGQARITPGFRLDAKFVIHTVGPVYNNKQVSAPLLRSAIKESLLLCKGKGLKSVAFPAISCGVYGYPAEEAAEIAIDTMLEFGEDIDLIEFVLFGKDTYVPFLAKASEKL 711
S V+ FS A + ++ G +FKL SSVL I +GD+TRW DAIVN ANERMLGGGG DGAIHRAAG +L AC+EV GIRCPTG+ARITPGF L A VIHTVGPVY++ L +A K SL + K +K +AFPAISCGVYGYP +EAA +AI T+ +F +D+ + FVLF + Y ++ KA E L
Sbjct: 62 SAVSPRTRSFSGAANLSTMASSGEGAVFKLSDSSVLNILKGDITRWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPQLRAACYEVPEVRP--GIRCPTGEARITPGFNLPASHVIHTVGPVYDSDSNPKESLANAYKNSLRVAKENNIKCIAFPAISCGVYGYPFDEAASVAISTIKQFADDLKEVHFVLFSDEIYSVWINKAKEVL 269
BLAST of mRNA_P-littoralis_Contig153.70.1 vs. uniprot
Match: A0A3Q7GJ99_SOLLC (Macro domain-containing protein n=6 Tax=Solanum subgen. Lycopersicon TaxID=49274 RepID=A0A3Q7GJ99_SOLLC) HSP 1 Score: 198 bits (503), Expect = 1.730e-54 Identity = 114/229 (49.78%), Postives = 147/229 (64.19%), Query Frame = 1
Query: 58 ISPRKLMLARLGSIFSVVADMQGMFSAFAGRADLSPRG----LFKLKGSSVLAISQGDLTRWK----GDAIVNAANERMLGGGGVDGAIHRAAGGKLLDACH---EVQPAPNSGGIRCPTGQARITPGFRLDAKFVIHTVGPVYNNKQVSAPLLRSAIKESLLLCKGKGLKSVAFPAISCGVYGYPAEEAAEIAIDTMLEFGEDIDLIEFVLFGKDTYVPFLAKASEKL 711
ISPR+L +A ++G S+ AG + ++ G F+L SS+L I +GD+TRW DAIVN ANERMLGGGG DGAIHRAAG +L DAC+ EVQP GIRCPTG+ARITPGFRL A VIHTVGPVY+ L +A + SL + K ++ +AFPAISCGV+GYP +EAA +AI T+ EFG D+ + FVLF + Y ++ +E+L
Sbjct: 60 ISPRQL-----------IAVVRGRRSSIAGVSTMASGGENPVTFQLTPSSLLKIQKGDITRWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELRDACYKVREVQP-----GIRCPTGEARITPGFRLPASHVIHTVGPVYDANPNPKASLTNAYRNSLRVAKENNIQYIAFPAISCGVFGYPYDEAATVAISTVKEFGSDLKEVHFVLFSDEIYDAWVTATNEQL 272 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig153.70.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig153.70.1 >prot_P-littoralis_Contig153.70.1 ID=prot_P-littoralis_Contig153.70.1|Name=mRNA_P-littoralis_Contig153.70.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=365bp MLARLGSIFSVVADMQGMFSAFAGRADLSPRGLFKLKGSSVLAISQGDLTback to top mRNA from alignment at P-littoralis_Contig153:245767..255442+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig153.70.1 ID=mRNA_P-littoralis_Contig153.70.1|Name=mRNA_P-littoralis_Contig153.70.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9676bp|location=Sequence derived from alignment at P-littoralis_Contig153:245767..255442+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig153:245767..255442+ >mRNA_P-littoralis_Contig153.70.1 ID=mRNA_P-littoralis_Contig153.70.1|Name=mRNA_P-littoralis_Contig153.70.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1095bp|location=Sequence derived from alignment at P-littoralis_Contig153:245767..255442+ (Pylaiella littoralis U1_48)back to top |