mRNA_P-littoralis_Contig153.64.7 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig153.64.7
Unique NamemRNA_P-littoralis_Contig153.64.7
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig153.64.7 vs. uniprot
Match: A0A7R9YAI8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAI8_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.060e-45
Identity = 132/393 (33.59%), Postives = 206/393 (52.42%), Query Frame = 3 
Query:  438 EVINTKE--SFKLNTRNLQDVVDQ-AKGMPIAIVSVVGALRSGKSFLLSCFLDCLE--AQEGRDADLN------EGLLGGHGR--------EVGFPWKGGYKGHTQGMWVWPKPFIREVDDGQGGRTRMAVLLVDTQGLFDTTVNRQLEACLFGLATTLSSCQIFNVMKQVETNKLGSLAVFLEYGTVG--------NDNNNGGAQ---------RNEAPFQRLEILIRDWQCWKEEDDPMKKAPKKLHNEFIAYLDETLSNQTTD--STK--IKNCFLDRIGCFGLPDPGEKVTCDTFDGKMSDINSGFRRLLAFYIDTAIVGQLKSNDLPNLSNRGEGDFVKSVGDWVQLFSDGMTNGRLPDAQSWLSLLWDKQNQCSLDDVFKTFERDMD 1496
            ++I T E  SF     NL  V+DQ +  M +A+VSVVG+ R+GKSFLLS FL  LE   Q   D  ++      E L  G+          + GF W+GG +  T G+W+W KPF R+      G  ++AVLLVDTQG+FD      L +C+FG++T +SS QI+NV K++  + L  LA+F EYG VG         +  +GG +          ++ PFQRLE LIRDWQ +++EDD +++  +++ +E+ A +    + +  D  ST+  I +CF      F L  PG KVT  T+DG +  ++  FR+LL FY+         S +L   +  G    +  + ++V+ ++     G  P+A + L+      N+ +       +++ MD
Sbjct:   11 QIIRTTEENSFAFEEENLAQVLDQISDDMKVAVVSVVGSFRTGKSFLLSFFLRYLEYSKQFPNDTSMDWMQFRGERLQEGNSNSGVDSPTVDFGFKWRGGTERQTTGIWMWSKPFFRQ--SAIEGGAKIAVLLVDTQGMFDNETTMALTSCIFGISTLISSHQIYNVEKRISEDNLQHLAMFSEYGRVGVSSEEDGEGEQEDGGEETKALPRRNLEDQVPFQRLEFLIRDWQDFEDEDD-IQRCEREV-DEYWAKVKAVETREAEDLRSTREQITSCFKSTTA-FALTHPGSKVTKKTYDGSIDAMDPTFRKLLDFYVRRVF----SSANLDPKAIFGHDISILELKNYVKTYTKLFEAGVFPEATTMLAATVKATNENARQSALVKYQQGMD 394
[Close]
BLAST of mRNA_P-littoralis_Contig153.64.7 vs. uniprot
Match: A0A7S2SIT7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SIT7_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.810e-43
Identity = 126/390 (32.31%), Postives = 204/390 (52.31%), Query Frame = 3 
Query:  456 ESFKLNTRNLQDVVDQA-KGMPIAIVSVVGALRSGKSFLLSCFLDCLEAQ--EGRDADLNE------GLLGGHGR---------EVGFPWKGGYKGHTQGMWVWPKPFIREVDDGQGGRTRMAVLLVDTQGLFDTTVNRQLEACLFGLATTLSSCQIFNVMKQVETNKLGSLAVFLEYGTVG------------NDNNNGGAQRN---EAPFQRLEILIRDWQCWKEEDDPMKKAPKKLHNEFIAYLDETLSNQTTDSTK-----IKNCFLDRIGCFGLPDPGEKVTCDTFDGKMSDINSGFRRLLAFYIDTA-----IVGQLKSNDLPNLSNRGEGDFVKSVGDWVQLFSDGMTNGRLPDAQSWLSLLWDKQNQCSLDDVFKTFERDMD 1496
            +SF LN   L+ V+ +  K + + ++SVVGA R+GKSF+L  FL  L +   E  + + +E      G L G+           E GF W+ G +  T G+W+W + FIRE+ D +G   ++AVL++DTQG+FD+T+ + L A +FGL+T +SS  ++N+ K+++ + L  LA+F EYG V                 +G +Q+      PFQRLE+L+RDWQ + + D  +++    +H++  +YLDE L  +     K     IK CF D + C+ LP PG +V   TFDG +  I+  FRRL A YI        +V ++ +  +  +      +    V  +  LF +       P+AQ+ L+      N  +L    +++ R+MD
Sbjct:   25 DSFVLNEEKLRQVLQKVPKDLKLNVISVVGAFRTGKSFILDLFLRYLRSDPAESFEEEPDEKWMYRGGKLEGNNNTTKDSKGDIEGGFGWRSGRERCTTGIWIWSEHFIRELPDSKG--EKVAVLIMDTQGMFDSTLGQHLTASIFGLSTLISSYSVYNLDKRIQEDNLQHLALFSEYGRVALVEERKAGEEEWTSTADGESQKTGEGPRPFQRLELLVRDWQDFHDIDGTLEE----IHDDMRSYLDEVLRERRQKDLKEVREQIKLCFED-VSCWLLPHPGMEVIKKTFDGDIDKISPEFRRLAADYIRRVFSKRMVVKKIHARPVTAM------ELFTYVKAYCGLFREAKI---FPEAQTLLAATAQANNMNALASAIQSYRREMD 398
[Close]
BLAST of mRNA_P-littoralis_Contig153.64.7 vs. uniprot
Match: A0A7S2D4G1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4G1_9STRA)

HSP 1 Score: 174 bits (442), Expect = 7.850e-43
Identity = 142/473 (30.02%), Postives = 230/473 (48.63%), Query Frame = 3 
Query:  420 TIDETGEVINTKESFKLNTRNLQDVVDQAKG-MPIAIVSVVGALRSGKSFLLSCFLDCLEAQ--EGRDADLNEG----------------LLGGHGREV-GFPWKGGYKGHTQGMWVWPKPFIREVDDGQGGRTRMAVLLVDTQGLFDTTVNRQLEACLFGLATTLSSCQIFNVMKQVETNKLGSLAVFLEYGTV--------------GNDNNNGGAQRNEAPFQRLEILIRDWQCWKEEDDPMKKAPKKLHNEFI-AYLDETLSNQTTDST------KIKNCFLDRIGCFGLPDPGEKVTCDTFDGKMSDINSGFRRLLAFYIDTAIVGQLKSNDLPN--LSNRGEGDFVKSVGDWVQLFSDGMTNGRLPDAQSWLSLLWDKQNQCSLDDVFKTFERDMDEK----TINFVDPDELEKLQQEGKEVAMSSFQP---RGDEETQKKAREALLRKLDKETKRMNERNAAMSSW 1688
            T+ E GE      SF L   NL  ++ +    M +++ SVVG  R+GKSFLL+  L  L  +  EG      EG                 +  +G +  GF W+GG++  T G+W++ +PF ++V +G+    ++AVL+VDTQGLFD      L +C+FGL+T +SS QI+NV +++  + L  LA+F EYG +              G D  + G ++    FQRLE L+RDW  + +E D     P++L  EF+  Y+ + +  Q +         +I +CF D I CF LP PG K+   ++ G +  I   FR +L  Y++      LK  ++    L+    G F K+   +V LF DG +    P+A++ L    +  N  +L   +K F  +MD K       FV  D  E+     ++ A++ F      G ++   K +  +L  +D++ +R    N + + W
Sbjct:    6 TVTEEGE---KSYSFDLCGDNLDSILAKVPADMKVSVCSVVGNFRTGKSFLLTFMLRFLRNRGCEGNSWQTAEGDNISEGNNNAASTAAKTVESNGADCHGFDWRGGHERMTTGIWMYSRPFFQDVFNGE----KIAVLIVDTQGLFDNETTMLLTSCIFGLSTLMSSYQIYNVKERIAEDNLQQLALFSEYGRMALSQEEEXXXXXXTGADGGDTGPKQKNKAFQRLEFLVRDWPNFDDEGDE-SAHPERL--EFMDKYIHDVVRKQKSSGDLQETRDQITSCF-DNISCFLLPHPGLKIQKSSYTGDIDKIEDDFRDMLTLYMNHIFNVDLKPKEIDGRALTASELGVFTKT---YVDLFKDGAS---FPEAKTVLQATAEANNNNALSLAYKKFMAEMDVKFGPRQHAFVQHDAFEEYTLASRKSAIAMFTQIAHMGSKKNSAKFQATMLADIDEQIERFRVMNESRNPW 461
[Close]
BLAST of mRNA_P-littoralis_Contig153.64.7 vs. uniprot
Match: A0A836CGS0_9STRA (Anti-viral guanylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGS0_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.400e-41
Identity = 141/423 (33.33%), Postives = 202/423 (47.75%), Query Frame = 3 
Query:  375 QTRPIELVRVIKPSVTIDETGEVINTKESFKLNTRNLQDVVDQAK-GMPIAIVSVVGALRSGKSFLLSCFLDCLEAQEGRDAD-----------LNEG--------LLGGHGREVG-----FPWKGGYKGHTQGMWVWPKPFIREVDDGQGGRTRMAVLLVDTQGLFDTTVNRQLEACLFGLATTLSSCQIFNVMKQVETNKLGSLAVFLEYGTVG----NDNNNGGAQRN-----------EAPFQRLEILIRDWQCWKEEDD--PMKKAPKKLHNEFIAYLDETLSNQTTDSTKIKNCFLDRIGCFGLPDPGEKVTCDTFDGKMSDINSGFRRLLAFYIDTAIVGQLKSNDL-------PNLSNRGEGDFVKSVGDWVQLFSDGMTNGRLPDAQSWLSLLWDKQNQCSLDDVFKTFERDMD 1496
            + +P+ +VR          TG+      SF L   NL  ++ Q   GM +++VSVVGA R+GKSFLLS FL  L A     AD           L EG        + GG     G     F W+GG    T G+W+W +PF R      GG T +AVLLVDTQG+FD   +  L A +FGL+T +SS QI+NV K+++ + L  LA+F EYG +      D  +GGA  +           E PFQ LE L+RDWQ + +ED    M+K+      E I   D     +T D  +I  CF +++ CFGL  PG  V    +DG +  I++ FR LL  Y+      +L+   +       P LS          +  +V+LF +G +    P+A++ L       N  +      T++ DM+
Sbjct:    5 RAKPLRIVR----------TGDA-QDNYSFTLEEENLALILSQVPDGMKVSVVSVVGAFRTGKSFLLSFFLRYLHADAETPADTLDWIKRDGEALREGNANLGVGQVTGGLQDPAGDSPLSFEWRGGQTRMTTGIWMWSEPFFRRAI---GGET-VAVLLVDTQGMFDNETSMGLTASIFGLSTLISSHQIYNVEKRIQEDHLQQLALFSEYGRMALAHKQDGADGGADASPSPAVVEPEEVEKPFQLLEFLVRDWQNFDDEDSISDMQKSMDNYLLEVIRDRDVKDLQETRD--QIMACF-EKVSCFGLCHPGMDVVKKNYDGSIDKIDATFRALLDAYVRRVFGNELEPKRIHGRYLTAPELSTY--------ISAYVRLFHEGAS---FPEAKTLLEATSAANNSNAKFAALATYKSDME 398
[Close]
BLAST of mRNA_P-littoralis_Contig153.64.7 vs. uniprot
Match: A0A7S1CG62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CG62_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.690e-41
Identity = 135/458 (29.48%), Postives = 214/458 (46.72%), Query Frame = 3 
Query:  462 FKLNTRNLQDVVDQAKGM---PIAIVSVVGALRSGKSFLLSCFLDCLEAQEGR----DADLN-------------------------EGLLGGHGREVGFPWKGGYKGHTQGMWVWPKPFIREVDDGQGGRTRMAVLLVDTQGLFDTTVNRQLEACLFGLATTLSSCQIFNVMKQVETNKLGSLAVFLEYGTV---------------GNDNNNGGAQRNEA-PFQRLEILIRDWQCWKEEDDPMKKAPKKLHNEFIAYLDETLSNQTTDSTKIKNCFLDRIGCFGLPDPGEKVTCDTFDGKMSDINSGFRRLLAFYIDTAIVGQLKSNDLPNLSNRGEGDFVKSVGDWVQLFSDGMTNGRLPDAQSWLSLLWDKQNQCSLDDVFKTFERDMDEKTINF--VDPDELEKLQQEGKEVAMSSFQPR---GDEETQKKAREALLRKLDKETKRMNERNAA 1676
            F+L+   L+ ++   +      IA+VSV GA R+GKSFLL CFL  L   + R    DA                            EG+ G  G E GF W+GG +  T G+W++ +PF+  V  G+     +AVLL+DTQGLFD+ V+    A +F L+T LSS Q++NV++QV+  +L +L  F E+  V               G D   G + R    PFQ LE+L+RDWQ +++E+D + K   ++  E    L             ++  F D + CF LP PG+ +T   +DG +  +++ F R+L  Y+ +       S DL   +  G      ++  +++ F    TN +LP + + +  +    N  + DD    + R MD+ T +   +  + L       K  A+  F      GD+   K  RE L++ LD++ +    RN A
Sbjct:  230 FRLHEEALEGIMQSVRATGCSKIAVVSVAGAYRTGKSFLLDCFLRYLRFSDARVKRDDAGAAAXXXXXXXXXXAPSSWLTHAGRLAIEGMAGSDGSERGFLWRGGSERATTGIWMYGRPFVLRVRGGE----LVAVLLMDTQGLFDSAVSADTTASIFALSTLLSSHQVYNVVRQVDEKQLENLHFFTEFARVAVREFQRAEQRAAAEGKDGEGGASARTTPRPFQTLEMLVRDWQHFEDEED-VAKCRAEMDEELQRILSSDFEEGVQAREAVQGAF-DSVKCFLLPHPGKALTRPKYDGSVDGLDAAFLRMLEEYVHSVF-----SEDLAVKAVAGRALDAHTLPAYIKAFVSVFTNSQLPRSVTIVDAISQTTNLLARDDAAAAYVRAMDKLTTDSGPLTAEALGAHHDAAKGAAVEMFDTAPILGDDARVKATREELVKTLDEKLELYRRRNDA 676
[Close]
BLAST of mRNA_P-littoralis_Contig153.64.7 vs. uniprot
Match: A0A4D9DBZ0_9STRA (GB1/RHD3-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBZ0_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.490e-41
Identity = 126/402 (31.34%), Postives = 194/402 (48.26%), Query Frame = 3 
Query:  459 SFKLNTRNLQDVVDQAKG-MPIAIVSVVGALRSGKSFLLSCFLDCLE--------------AQEGRDADLNEGLLGGH-GR---EVGFPWKGGYKGHTQGMWVWPKPFIREVDDGQGGRTRMAVLLVDTQGLFDTTVNRQLEACLFGLATTLSSCQIFNVMKQVETNKLGSLAVFLEYGTVG------------------------NDNNNGGAQ--------RNEAPFQRLEILIRDWQCWKEEDDPMKKAPKKLHNEFIAYLDETLSNQTTDSTK-----IKNCFLDRIGCFGLPDPGEKVTCDTFDGKMSDINSGFRRLLAFYIDTAIVGQLKSNDLPNLSNRGEGDFVKSVGDWVQLFSDGMTNGRLPDAQSWLSLLWDKQNQCSLDDVFKTFERDMD 1496
            SF L   NL  ++ Q    M +A+VSVVGA R+GKSFLL+  L  L               A + R+ ++NE +L G  GR   E  F W+ G +  T G+W+W + F+R V +G+     +AVLL+DTQG+FD   +  L AC+FGL+T LSS QI+NV  +++ + L  LA+F EYG +                          + + GG +         +E PFQR+E L+RDW  + +ED P  +    L  E  +YL + +   +    +     I  CF  ++ CF LP PG +V    + G+++ IN  FRRLL  Y       +L++  +         +  + V  +V++F  G    R P+AQ+ L       NQ +       ++ +MD
Sbjct:   37 SFHLEQANLDSIMAQVPSDMKVAVVSVVGAFRTGKSFLLTFLLRYLRYGSELDDSEDWMTAAGDLREGNINEKVLAGDDGRNALESSFQWRAGKERTTTGIWMWSEAFVRRVANGE----EVAVLLMDTQGMFDNETSMNLTACIFGLSTLLSSYQIYNVQNRIQEDNLQHLALFSEYGRIALAGEAGKLVRQGKKQGDEGTDKGHEEKSEGGVEAEELMLPDEDEIPFQRVEFLVRDWMDF-DEDLPFHQ----LKEEMDSYLQDVIEKGSVKDLRQTREQILGCF-QKVRCFVLPHPGLEVPKKAYSGEVALINPFFRRLLNHYAREVFGPELEAKRIHKRDLTAP-ELRQYVSSYVEMFKSGT---RFPEAQTMLEATASANNQNATQLALSKYKGEMD 424
[Close]
BLAST of mRNA_P-littoralis_Contig153.64.7 vs. uniprot
Match: A0A6S8WZ99_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8WZ99_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.300e-39
Identity = 140/488 (28.69%), Postives = 229/488 (46.93%), Query Frame = 3 
Query:  459 SFKLNTRNLQDVVDQA-KGMPIAIVSVVGALRSGKSFLLSCFLDCLEAQEG---------------------RDAD----------------LNEGLLGGHGREVGFPWKGGYKGHTQGMWVWPKPFIREVDDGQGGRTR-MAVLLVDTQGLFDTTVNRQLEACLFGLATTLSSCQIFNVMKQVETNKLGSLAVFLEYGTVGNDNNNG-------------------GAQRNEAPFQRLEILIRDWQCWKEEDDPMKKAPKKLHNEFIAYLDETLSNQTTDSTK-----IKNCFLDRIGCFGLPDPGEKVTCDTFDGKMSDINSGFRRLLAFYIDTAIVGQL-KSNDLPNLSNRGEGDFVKSVGDWVQLFSDGMTNGRLPDAQSWLSLLWDKQNQCSLDDVFKTFERDMDE----KTINFVDPDELEKLQQEGKEVAMSSFQPR---GDEETQKKAREALLRKLDKETK---RMNERNAAMSSWMTYL 1700
            +F  +   LQ ++ Q  +   + +VSVVGA R+GKSFLLS FL  L   EG                      D D                 N+  LG  G    F W+GG + +T G+W+W KPFI  +   Q G +  +AVLLVDTQG+FD      L A +FGL+T LSS QI+NV K+++ + L  LA+F EYG +   +N                     G      PFQR+E L+RDWQ + +EDD           E  AYLD  L+ +     K     I +CF D + CF +  PG KVT  T+ G + D++  F+ L+  Y +      + KS     L+    G ++++   + ++F  G    + P+A + L    +  N  + +   + ++ +MD     + +++++P+ELE+  +   E  +  F+     G+  T + A+  ++R +++  +   ++N+    +S + TY+
Sbjct:  113 AFTYHDEALQSIMKQVPETHKVCVVSVVGAFRTGKSFLLSWFLRYLNHYEGIHQNSKEDANSXXXXXXXXKINDGDETKWYEQQHAXXXXXNSNDASLGNDG----FNWRGGAERNTTGIWMWSKPFI--LPRNQSGNSEDIAVLLVDTQGMFDHETTMGLTAAIFGLSTLLSSYQIYNVDKRIQEDNLQQLALFSEYGKMALQSNVNDDXXXXXXXXXFDSIEDELGLVEKPKPFQRIEFLVRDWQNFDDEDDI-----DACEAEMKAYLDNVLAERAAADLKDTRLQITSCF-DEVSCFLMTHPGSKVTKKTYTGDIKDVDPTFKALMDRYCNRVFENLVAKSIHRRELTAAELGAYIQN---YAKMFESG---AQFPEAATMLEATANANNSNATNLAMRKYKEEMDNLAGARCVDYLNPEELEQSHRNLFEDCVGMFESIACFGNIATIQDAKNEMIRSMEENFEMYTKLNDSRNPLSGFETYI 582
[Close]
BLAST of mRNA_P-littoralis_Contig153.64.7 vs. uniprot
Match: A0A7J6MGN1_PERCH (Alkyltransferase-like protein 1 n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MGN1_PERCH)

HSP 1 Score: 162 bits (409), Expect = 6.190e-38
Identity = 135/490 (27.55%), Postives = 243/490 (49.59%), Query Frame = 3 
Query:  381 RPIELVRVIKPSVTIDETGEVINTKESFKLNTRNLQDVVDQAKGMPIAIVSVVGALRSGKSFLLSCFLDCLEAQEGR---------------------DADLN--EGLLGG-----HGREV----GFPWKGGYKGHTQGMWVWPKPFIREVDDGQGGRTRMAVLLVDTQGLFDTTVNRQLEACLFGLATTLSSCQIFNVMKQVETNKLGSLAVFLEYGT----VGNDNNNGGAQRNEAPFQRLEILIRDWQCWKEEDDPMKKAPKKLHNEFIAYLDETLSNQTTDSTKIKNCFLDRIGCFGLPDPGEKVTCDTFDGKMSDINSGFRRLLAFYIDTAIVGQLKSNDLPNLSNRGEGDFVKSVGDWVQLFSDGMTNGRLPDAQSWLSLLWDKQNQCSLDDVFKTFERDMDE----KTINFVDPDELEKLQQEGKEVAMSSFQPR---GDEETQKKAREALLRKLD-------KETKRMNERNAAMSSWMTYL 1700
            RP++LV     ++ +D+  EV    E+ +  T+NL+      +   I++VS++GA R+GKSF+L  FL  L   +G+                     DAD N  E LL        G++     GF W+ G    T+G+WVW  PF+R+++ G     ++A++L+DTQG +D+ + ++  A +FGL   LSS QI+N+ KQ++ +K+ +L  F+E  +    V  D N  G Q    PFQ LE L+RDW  + ++D  +++   +++     ++DE    + + +  +   F + + CF LP PG  +    + GK++DI+  F R L FY+ +          L   S  G+    ++ G  V  F +   N  +P A ++   +    N    +     ++ DM+     K  + + PD+LE+  ++ K +A+ SF  +   G ++ ++K +E L++++D        E KR  +++ A  + +T L
Sbjct:   17 RPLQLV-----TIKMDD-NEVRVNDEAMEELTKNLE----ATRCDKISVVSIMGAYRTGKSFMLDLFLRYLRYTDGKEDSYYPLDDPVALNRRRGSSGDADFNPPEWLLAQGDSLQEGQKATDSHGFHWRPGMDKCTEGIWVWSMPFVRKLNSGD----KVALVLMDTQGAWDSKMTKEQSATVFGLTAVLSSKQIYNISKQIQEDKVENLHFFMEVASAALRVSGDKN--GEQGK--PFQCLEFLVRDWANF-DDDMTVRECVAQMNEHLAQHMDEHRVREDSTAVALNKMF-ESVSCFCLPHPGLMIQKKGWSGKLADIDPDFIRFLDFYVRSVFTDP----HLHAKSILGKDLSPQTFGPVVNAFVEAFANA-VPAAATFTQAMARSSNLLGKEQAINEYKSDMEAAMGPKNGSGIKPDQLEQAARKAKTMALQSFSKQTLFGPDDEREKTKEELVKEIDGLLDYYKDENKRRMDKSLAAFAGVTVL 481
[Close]
BLAST of mRNA_P-littoralis_Contig153.64.7 vs. uniprot
Match: A0A2R5GL28_9STRA (Atlastin-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GL28_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.440e-37
Identity = 123/402 (30.60%), Postives = 197/402 (49.00%), Query Frame = 3 
Query:  417 VTIDETGEVINTKESFKLNTRNLQDVVDQAKG-MPIAIVSVVGALRSGKSFLLSCFLDCLEAQEGR-DADLNE---------GLLGGHGREV--------GFPWKGGYKGHTQGMWVWPKPFIREVDDGQGGRTRMAVLLVDTQGLFDTTVNRQLEACLFGLATTLSSCQIFNVMKQVETNKLGSLAVFLEYGTVGNDNNNGGAQRNE----------------APFQRLEILIRDWQCWKEEDDPMKKAPKKLHNEFIAYLDETLSNQTTDSTK-----IKNCFLDRIGCFGLPDPGEKVTCDTFDGKMSDINSGFRRLLAFYIDTAIVGQLKSNDLPNLSNR--GEGDFVKSVGDWVQLFSDGMTNGRLPDAQSWLSLLWDKQNQCSLDDVFKTFERDMD 1496
            + ID  GE      SF LN + L+ V+    G M + IVSVVGA R+GKSF+L  FL  L +   + D    E         G L G+  +         GF W+ G +  T G+W+W + FIRE+  G+G   ++AVL++DTQG+FD+T+ + L A +FGL+T +SS  ++N+ K+V+ + L  LA+F EYG V        A   E                 PFQ LE+L+RDWQ + + + P++     +  +   YL E LS +     K     I+ C+ +++  + LP PG  V    ++G +  I+  FRRL+A YI      ++    +  +S R     +    +  +  LF +       P+A++ L+      N  ++     T++R+MD
Sbjct:   12 IDIDARGE------SFVLNDKALKSVLQPIPGDMKLNIVSVVGAFRTGKSFILDLFLRYLRSTSSKPDKCRGEPDESWMYSGGKLEGNNNKADDSGDKAGGFGWRSGRERCTTGIWMWSEHFIRELPGGKG--EKVAVLIMDTQGMFDSTLGQHLTASIFGLSTLISSYSVYNLDKRVQEDNLQHLALFSEYGRVALMEERKQASDEEWYSTADGEAESTGEGPRPFQWLELLVRDWQDFHDVEGPLED----IRADMKEYLGEILSERNQKDLKEVREQIRLCY-EKVSVWMLPHPGFAVVKKNYNGDIDKISPDFRRLVADYIRRVFSKRMV---VKKVSGRPVNATELYTYIKVYCSLFKEAKI---FPEAKTLLAATTQANNMNAVQSALNTYKREMD 394
[Close]
BLAST of mRNA_P-littoralis_Contig153.64.7 vs. uniprot
Match: A7RZT7_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RZT7_NEMVE)

HSP 1 Score: 157 bits (398), Expect = 3.070e-37
Identity = 128/414 (30.92%), Postives = 215/414 (51.93%), Query Frame = 3 
Query:  441 VINTKE-SFKLNTRNLQDVV--DQAKGMPIAIVSVVGALRSGKSFLLSCFLDCLEAQEGRDADLNEGLLGGHGREV-GFPWKGGYKGHTQGMWVWPKPFIREVDDGQGGRTRMAVLLVDTQGLFDTTVNRQLEACLFGLATTLSSCQIFNVMKQVETNKLGSLAVFLEYGTVGNDNNNGGAQRNEAPFQRLEILIRDWQCWKEEDDPMKKAPKKLHNEFIAYLDETLSNQTTDSTKIKNCFLDRIGCFGLPDPGEKV-TCDTFDGKMSDINSGFRRLLAFYIDTAIVGQ---LKSNDLPNLSNRGEGDFVKSVGDWVQLFSDGMTNGRLPDAQSWLSLLWDKQNQCSLDDVFKTFERDMDEKT---INFVDPDELEKLQQEGKEVAMSSF---QPRGDEETQKKAREALLRKLD 1640
            VI T++ +F+L+ + L  ++  D  +   +A+VSV GA R GKSFLL  FL  L+ ++  D       LGG    + GF W+GG +  T G+ +W KP+I +  DG+     + VLL+DTQG FD++   +  A +F L+T  SS Q++NV + ++ + L  L +F EYG +  +NN         PFQRL  L+RDW  +  E +  +    ++    +   +   S        IK CF ++IGCF +P PG +V T  TFDG++ DI+  F+  L   I + +  +   LK  +   ++ RG  ++ K+   ++++F        LP  +S L    +  N  +L     T+ + M+      + ++ P+ELE+   E ++ A+S F   +  G +E  +K  E LL+++D
Sbjct:   10 VIATEDHAFELDEKALSKILLDDSIRDKKVAVVSVAGAFRKGKSFLLDFFLRYLDRKDSCDD-----WLGGETEALEGFSWRGGSERDTTGILMWNKPYICKRPDGE----EVVVLLMDTQGAFDSSSTVKDCATIFALSTMTSSTQVYNVSQNIQEDDLQHLQLFTEYGKLAMENN------EIKPFQRLLFLVRDW-SFPYEANYGEAGGSQILERRLKTTERQHSELLQVRKHIKECF-EKIGCFLMPHPGLRVATNPTFDGRLVDIDDEFKENLRKLIPSLLAPENLELKGINGEEVTCRGLLEYFKA---YMKIFQ----GDELPQPKSMLLATAEANNLAALATAKDTYSKAMESVVGGDMPYLSPNELERKHLETRDSALSHFHGTRKMGGKEFSEKYVEQLLKEID 399
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig153.64.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R9YAI8_9STRA1.060e-4533.59Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2SIT7_9STRA1.810e-4332.31Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S2D4G1_9STRA7.850e-4330.02Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A836CGS0_9STRA1.400e-4133.33Anti-viral guanylate-binding protein n=1 Tax=Tribo... [more]
A0A7S1CG62_9STRA1.690e-4129.48Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A4D9DBZ0_9STRA4.490e-4131.34GB1/RHD3-type G domain-containing protein n=2 Tax=... [more]
A0A6S8WZ99_9STRA1.300e-3928.69Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7J6MGN1_PERCH6.190e-3827.55Alkyltransferase-like protein 1 n=1 Tax=Perkinsus ... [more]
A0A2R5GL28_9STRA1.440e-3730.60Atlastin-1 n=1 Tax=Hondaea fermentalgiana TaxID=23... [more]
A7RZT7_NEMVE3.070e-3730.92Predicted protein n=2 Tax=Nematostella vectensis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig153contigP-littoralis_Contig153:207336..220181 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FX45
PFAMsGBP,GBP_C
Model size2694
Max annot lvl2759|Eukaryota
KEGG koko:K17339
Hectar predicted targeting categoryother localisation
Exons9
Evalue3.3e-40
EggNOG OGsKOG2037@1|root,KOG2037@2759|Eukaryota
DescriptionGTPase activity
Cds size1893
COG categoryS
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig153.64.7prot_P-littoralis_Contig153.64.7Pylaiella littoralis U1_48polypeptideP-littoralis_Contig153 207518..219562 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789732.6519756-UTR-P-littoralis_Contig153:207335..2075171680789732.6519756-UTR-P-littoralis_Contig153:207335..207517Pylaiella littoralis U1_48UTRP-littoralis_Contig153 207336..207517 +
1680789732.772859-UTR-P-littoralis_Contig153:219562..2201811680789732.772859-UTR-P-littoralis_Contig153:219562..220181Pylaiella littoralis U1_48UTRP-littoralis_Contig153 219563..220181 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789732.6669617-CDS-P-littoralis_Contig153:207517..2077061680789732.6669617-CDS-P-littoralis_Contig153:207517..207706Pylaiella littoralis U1_48CDSP-littoralis_Contig153 207518..207706 +
1680789732.6777909-CDS-P-littoralis_Contig153:214608..2148471680789732.6777909-CDS-P-littoralis_Contig153:214608..214847Pylaiella littoralis U1_48CDSP-littoralis_Contig153 214609..214847 +
1680789732.6883745-CDS-P-littoralis_Contig153:216057..2163011680789732.6883745-CDS-P-littoralis_Contig153:216057..216301Pylaiella littoralis U1_48CDSP-littoralis_Contig153 216058..216301 +
1680789732.7046382-CDS-P-littoralis_Contig153:216615..2168431680789732.7046382-CDS-P-littoralis_Contig153:216615..216843Pylaiella littoralis U1_48CDSP-littoralis_Contig153 216616..216843 +
1680789732.718923-CDS-P-littoralis_Contig153:217291..2173451680789732.718923-CDS-P-littoralis_Contig153:217291..217345Pylaiella littoralis U1_48CDSP-littoralis_Contig153 217292..217345 +
1680789732.7284632-CDS-P-littoralis_Contig153:217561..2177171680789732.7284632-CDS-P-littoralis_Contig153:217561..217717Pylaiella littoralis U1_48CDSP-littoralis_Contig153 217562..217717 +
1680789732.7370467-CDS-P-littoralis_Contig153:218054..2182461680789732.7370467-CDS-P-littoralis_Contig153:218054..218246Pylaiella littoralis U1_48CDSP-littoralis_Contig153 218055..218246 +
1680789732.7511334-CDS-P-littoralis_Contig153:218580..2187501680789732.7511334-CDS-P-littoralis_Contig153:218580..218750Pylaiella littoralis U1_48CDSP-littoralis_Contig153 218581..218750 +
1680789732.7642379-CDS-P-littoralis_Contig153:219141..2195621680789732.7642379-CDS-P-littoralis_Contig153:219141..219562Pylaiella littoralis U1_48CDSP-littoralis_Contig153 219142..219562 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig153.64.7

>prot_P-littoralis_Contig153.64.7 ID=prot_P-littoralis_Contig153.64.7|Name=mRNA_P-littoralis_Contig153.64.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=631bp
MQNSASPSHPGAPGGNAQTFPPREERGRSEEREKEPVSSEASKTAWLVDK
VKARLKIKKDAMQGQTRPIELVRVIKPSVTIDETGEVINTKESFKLNTRN
LQDVVDQAKGMPIAIVSVVGALRSGKSFLLSCFLDCLEAQEGRDADLNEG
LLGGHGREVGFPWKGGYKGHTQGMWVWPKPFIREVDDGQGGRTRMAVLLV
DTQGLFDTTVNRQLEACLFGLATTLSSCQIFNVMKQVETNKLGSLAVFLE
YGTVGNDNNNGGAQRNEAPFQRLEILIRDWQCWKEEDDPMKKAPKKLHNE
FIAYLDETLSNQTTDSTKIKNCFLDRIGCFGLPDPGEKVTCDTFDGKMSD
INSGFRRLLAFYIDTAIVGQLKSNDLPNLSNRGEGDFVKSVGDWVQLFSD
GMTNGRLPDAQSWLSLLWDKQNQCSLDDVFKTFERDMDEKTINFVDPDEL
EKLQQEGKEVAMSSFQPRGDEETQKKAREALLRKLDKETKRMNERNAAMS
SWMTYLRTTFLPTLSKACEYCLNAAMSSWMTYLRTTFLPTLSKACEYCLA
AIGLVFNAVGFSSAWGSVVRAFALVAVVVAVGLHFVTTHVERLLAFMTNC
AQMLLFALVVAVIAVGLRFETIHVKNCWRA*
back to top

mRNA from alignment at P-littoralis_Contig153:207336..220181+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig153.64.7 ID=mRNA_P-littoralis_Contig153.64.7|Name=mRNA_P-littoralis_Contig153.64.7|organism=Pylaiella littoralis U1_48|type=mRNA|length=12846bp|location=Sequence derived from alignment at P-littoralis_Contig153:207336..220181+ (Pylaiella littoralis U1_48)
CATGATCACCTCTCACATGGTGGTAAGAAAAAAAGCAAAGCAAAAAAAGC
AAAAGTCAGTCAGACCTTTTCTCCTCTCCTCCCCCGTCTCCCTCACACGC
TTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGTCGTCTGACCTCTTCCAA
GCCTTGGCTCTACAAACCCTGCACAAATATACATGCAAAACAGCGCTTCG
CCCAGCCACCCAGGAGCCCCAGGGGGAAATGCCCAGACCTTTCCACCCCG
CGAAGAGCGAGGAAGAAGCGAGGAGAGAGAGAAAGAGCCGGTTAGTTCCG
AGGCATCCAAGACAGCATGGCTCGTCGACAAAGTAAAAGCACGTCTCAAA
ATAAAGAAGGACGCGATGCAGGTGTGTGTTGTGTGTGTGTTGTCATCCCA
TGTTCTCTGGCACACTAGTCTGCAAACTACAGGCTAGGCCCATCGACGGG
GTCACACAGGAGGAAGGTCAACACAGGAGGAGTTACCCCCACCTTCCTTC
TGCGGTACATGCGTGAGATTGTGTGTGTGTGTGTGTGTGTGCCCATAATC
GACCGCGCTATAAGTCTAAGCGGGGCAGAGAAACTCAGAAGAACGCCCTT
CTTGTAATCTGTACTTCGAAGTGGTGTATTATGCCTAGCTGTGTGCGTGG
GACATGTGTGATGTGTCTGGAAGAAGCTCTTGAAGCCTGCTGTTTGAGAG
AGAAAGAGAGCCGCTGGTGATGATCGTGGGTGTGACATGTTTTGTGTGTG
TTGATTATCACATAGTCTAGCCCGTGGTGGTCACAAATCCAAACCCGACA
CATCATACCGCCGTGCTACTGCTGAAGGAGGAAAATCCCGTAACAACCCT
CGGAACGATGGAGTATATGTATCATATACAAGTATGATACGTCCCTGCCG
GCTCGACCTTGCTGCTCTCTCGTGCGCCTAGTAATTGAATGCTCCGTGCC
CGGTTTTCTCGATGCTCGGGGATAGGGTACTTACTGCTGTAGAGCGGCCG
TGATAGACCGTCTGTGGTGTCTTATTACTAGTCTTGGGTGGTACGAAGGA
GCCCCCCCCGGGATCGCGATTAAGGGGGCTCCTTCCTAACTGCATTAAGC
AAGCTGCGCTGCTGCCGAAAGCCTGCTTTCGATTTTGTTTCCTCTGCTTT
CCAACCCCCCCCTCAGACAACATCAGTCATCAAAAACAACATGGTGTGGG
CCCCTGTTTTTTTTTTTTTGTTTTTTTTTTGGGCGAGACATGTCGTTTGC
AGCAACCGTACAGCAGCGATTTCTCGGCGTAGACGACAGCCGTGCCTCTA
CCAAGCTGGTCCGACACGGACAGTGCCATGTAGATGTGGAAAAGTCTGCT
GTATCGTGCTGCTGATGGCCGTGGGTGTGCGTTCCGCTGGGTGCGTGCTA
CTGCTGAGGGCGTGTTATCCAACGTCTCGTAGAAACTAGATTTACAGCAG
TAGCGACAAACATCGTAGAGCAGCGATTTCTCGGCGTAGACGACAGCTGT
GCCTCTACCGAGCTGGTCCGACTCGGACAGTGCCACGTAGAGGTGGATAA
GTCTGCTGTATGGTGCTGCTGATGGCCGTGGGTGTGTGTGCGTTCTGGTT
GTGGAATGGCACTGCTGGGGAGGTGGTATCTGGCGTACGCACAGCAGAAA
ATAGCACGGTTGTGGGCAGCTCGGCGGCCACCGCGGTCGATTTGCGCAAG
GACGCAGGCACCAGTGAGGAATTACTATTTTTCTCGTGCGTTCAAGCCCG
GGGTCGCTCCGATCCGTGAAGAATTGGCCGCGTAAGCAACGAAAAAGTGG
CCTATTTAGGGCACAGACAGACAAACAGACAAACAGACAGACACCAAAAA
CATCGATTTGGTAAATTTGGGTCGCTAGGCATGTTTTTTTCCCAATCTTT
CCCACCGTCTCCCTCGCACACACACACACACACACACACACACACACATC
ACGACCCACTATATTTAGGAGCCTTTGGCCCCGACTTTCTTACAGAAAGC
ACGGTGCCCGGCGACTTCGTCGCCGGTGGGCTCCTTCCTATTAAGTTATT
ACAAGGGGGCTGCGCCGGCGCCTGAGGGGGCGCCGGCTGGTCGTGGTCGT
ATAGCTTACTGAGTATTATTATGTGTACGATATACAAGTACTTCGAAGTA
TAAAGGAAGAGGGAGGAAGGTGAAGCGTTGAGCAAGGAAGATCCCAAGAT
GATGCCAAGGGATAACAAGGAAAACAGATGAGGAGAAGGGGAATAATCCG
GGCACATTGTCTGAGAGGAGAGAGATCAGATTTAAATCGCGGAAGAAGAA
AAACATACGATATCATACCATGGATGCATGGTATGCTCCATCGCCTAGAG
TGAACGGTTTCAAACTTTACGTGCATTCGACGGAAAAAAAAGTAAAAATG
GGCAGACACGGCAGAAGAAACTACTTCGCAATACCAAAGGAGGAGAGGTT
GCGAGGCACCGGTATTTAGGACACAGCCAGCTATGTAACGGTAACCATGC
ATATAAACCAAGTGCAGTGTGTACTCGTACGGCCTGACGTAGCCGGGGGG
GTCGCGGAAGACATAATGTATGGTATCAAACTCAAATTGAAATGGAACGT
GAATTAAAGTGAGTCTCGTACCTGAGATTGAAAAATAAAAATAAAATTGA
ATATACCGCACTCAGAACACATAATACTACGCTGTGTAGCGCACAACAAA
CCGAAATCACATCATCAGTCGCCGCGCACTTCATGTGCTATTTCATGGTA
CATATGACGATCATTTTTTGTTTTGGACGTCATGAAGCACGACCGATCGA
AATAACGCCAAGACGATATGAAGAAATAAATTACAGAAATATTGTTTCCT
GATAAGAAGGCAATCAATCCCAAAATTAGTAGATCATCCGGGAAGGAAAC
GCAGGGTTAAAAGGGAGAATACTCGAGAGACGCGAGATCGAGAAGGAGAG
TGTGCCGCAACAAAGAAATATTGGTTTCGTAGAACACACACTGTACTTGA
AATAATTGCAGAAGGCGCACACACTTCTCGTAGTCAAGATTGTTGTGCAA
TGGGTTGCCAGCTTAGAGTCCGATAGTGACCCGGGGTGTGTGTATAGAAC
GTGACACACACCACGCAGTACGTGTTGTTTAGGAGAGAGGCGAAATAGGT
GGTGCTACACCATCGCCACCACCGTGTGGCTGGCACATGCACGACGTGTC
ATTGAATATCTTTTGGGGCTGCTGCAGTTTGCTGCATGGTGAGTGGCATA
CGACTTAGGACCGGACATGAGTTGTTGCAGGTTCTGTGGTACAGAATATA
GTATGTTAGAAAGTGAGCCTTGGATGATGATTTGACCAATCTCTTGTAAA
CTCCTCCGCTTTGTATGCGATGGAAAATCGTCAAACCGTCGGATCCAGGG
ACAGGTGCAAGAAACTCGACAGAAAAATGTGTTTGATAGTTTATCACCGT
AAGGATCACCATAAGGATACGTGATGGATAGTCGGGGGAACCATACTAAG
GAGAGGTGCCGAGAAATGCACCGAAGTTATAATGCTCCGTCGCCTATAGC
TCGTTGATCACAAAACCCAACGGTCTTCGGGAACAGGTTTTGATGCACAA
ACAACATTTAGTCTATTTATGTAAGGAACGAACGCCGTTCATGACATATA
TACAGGTACATACATAAATGTGGTCAGGGAGATGAGGCACAACAACTACA
TACATTGTGAATGGCAGAAACGTCTTGGGGCTCGACTTTGAGCTTGACGT
ACAAAATTGTCCGTGACCGAAGACAGACGCCGGAGCGAAAGTCTAAGCCT
ATAAGTTGTTTAGCGTCTGGCCTTAGATTTATACTTCGAAGTATATTGCG
GGAGTTCAAGTAGGCTACACGCAAAAGAGGGGATTGGACACGCCGAAAAA
TGATCACGTTTTTTTCCCACCGATCCGTGCGTCAAAATTTGGTTATAGAA
TTAACAACCGATATCTTTGGTACTTCGAAGTACGATATTAATAATGTGTA
AAATATCAAGGCAGACGCTGAGAGGAGTACACACCATCTCCCCAGCAGAG
TGCATAGCGTCTCTACTTCGAAGTATACGGCAGACTGCTGAGAGGAGCAC
ACACCATCTCTTCAGCAGCAGCAGTGCAGCGTCTGATATTATTGTAGCAC
ACTCACTCAGCAATAGATAATAGCAAAAAAATGTAATTGTACGTTGAGTT
GATTGTCACACAGCATTAGCGAGAGGAAAATCTTGACTTAACTGGGATGA
GAACAGACAGAACAGCAGCAGTATAGACACGAGCTTTTTATGATAGCATG
GCGCGATAAATTTTAAAGCAGTAGAGAAAAGACTAAGAGAAGTACACACT
CTCCAGTTGTGAAGCTATCATATATGTACTGATCAGATACATGTGGTGCA
CTACTGACACAGCAGAGGATACAGTTGATTTTCACAAAGAGTAAAGTGAG
AAAAGTCTTGTACTTCGAGTACCATTCATAACAACATAGACTTTGTGAGG
AGCACACCATCTCTGAACATGTTGAAACTTTACGTACGTTGGAAGCGGGG
AGACTTTTCGTTCTCCCTCAGATCATCAACAACCACCCTGCGTTCGGTTC
AGTTAATAAATTCATACATGTTTTATATCAACATGAAAACACAGCAGCAA
ACCTCCGGAGCATAATATTTACCTCTTATGTCAGACTGGCTGCTACTTCT
TCATTGACTAGGGCCGTAATTATACAGGAAACATGCAGTACCGGCCCACT
CATAAGAAACACCTGTTTTGAGCAAGGCTTAAAACCTTATCGTCCCCGTA
AACGTAAGCACAATTTCTTTGGTTCTCGTTTCTTTCTGTTCGCCAAGAAT
ATGGCACACCTATTATTTCTTGTTTTCCCAGTTTCTTGTTGCCATTCATT
CCCGAGACGAACTTTCGTTGCCCCAGTACTACCGCACCTGTGTCACCACG
CCTGCCTGTGTGACACCTTCGTAGTACCAGTTGTTACTAATCGCGTTCAG
AATACTACGAATCATTCTCTCTCCCGTTAACGCTATCCCACAGGAGTAGT
GCAACATGATCATAGTTCGAACCGCGGACGAGGTCGCCTGTTGCTTGTAG
GTTTCTAACGCCCACCTATCGCACACCTGCTACTGTACTGTGTAATTGAA
CGCTTCGTGCCCGGTTTGCCCGCGATGCTCGGGATAGGGTAGAGCGGCCG
TGATAGACCGTCTTGGTGTCTTATTATACAGTCGAGTGAGACAGACGGCA
CATGCCATAGCCTCTCTCGGATCATCACGTCACACATTCTGCACGCCATA
ATTCGCGCCGCAACATAACGCTTCCTACCCATGTAGAAAGCGATCAAAAT
CTCCAGGGGAGACCGCGTCGTCTACGTGACTTGCCGCACGAGTACTTTGA
TCACCTAGAACCACTTTTTCTTCGGTTTAGCACCACCACCGCCGTTAGGT
TTTTTTCTCGGTTCTTTCTTTGCGGCGAGAGCTCAATCTTTCTTTGCTGC
TGTCCTGCCGAGTTTCACGGTCTGGCGTGCCGTGCGTCTCGAGCAGGGGC
CTCGGTACCGCCGCCCCGGAGCAGTGGTTTTGCCGCGTATCCTGCTAATG
ATAGTTGCTTTGTCTCATCACCGGTCGATTTGGCCAGATTCAGAGTCAGC
TTTTAATTCGGAGTGAGGCACCCCAATTAATTGGTTTTCCTGAAATTTTC
TGCGACTGACGTATCTCGGGGAGTCATGCGCCGATCCGGTCAATAAATGG
CTCAAACGAAAGCCTATACCCGCAGGATGAATTCGATATTAACTACGGTT
GAATCAACGCCGTCAATCATTCATGTGACATTTTCTTTATTTCTCGGAAA
TGTTAATTAATGCCTGAAACAGTTTCAGGCCTGAATTGGTCACCCAGGCC
TAAAAACGCTATTATGGTGTAACGTTCCATCTAGACCCCCGACAGCCCTG
TAAACGGTATCGGCGTGTAGCTGCAGACATCCGGCGTCCGTGCAAGCAAA
ACAAAAAAACGAAATGTGAACAACGATTGAAATAGAGAGCAAGTAAAGAA
CTCACTCCGAATCAAAAGTTGACTCTGAATCTGGCGAAAGTGGTGTTACT
ACAGTTCCCGGTCCCCCGCTACTTTTGTCCAATCACCGGTCGAATTGTTT
TTTGACCCACAGCAGTCCCTGTCTGTTCGCAATGATCAGCCCAAAAGCCT
CTTGTTCCGTCTGCTTCCGAGGGTGTGTGGAACGCGTGCGTGGTGCGCGG
GTGGGTGGGTGTGTTATGTGCTGTGTGTGCGTGTGTGCGTGTCTGTGTGT
GCTCGCTGCTGTGCTGCATGATGCTCTGAATTGTACTTCTTCTGCTGCAG
TTTGTGTGCGCAAAGGAGATATCATCTTCCGTTTGTGTTGTGTGAAGGAG
ATGATGATCCTGCGTTCTATGCCAAACACTGCGGGGTACATGTTCAATAT
TCATGCCCACTGCGTGACCCCGGTTGGAGCGTCTACCTACCCGAAAGGTG
TAGAGTGGCGTCCAATGAAAGGGATGACAACAACAACTGCTGCTACTGCT
GCTGCTGTATGTGCTGCATGAGGTATTTTTTTCATGCTCAGGCAAAACTG
CTGAATGGCCAAACTGGTGTCCACTGCCGATCCTGCTTTCATACGAGAAA
TGTGTACGATGCGGGTGCAGAGATAAAGCGCAAAGAGAAAGCAACGCGTG
TTCCACACAGTCTGTAAAACTCCAATGTAATAATGTTGATACATCTGCCC
GCCAATATGGGAAAATTTCTTGTTGCTGCCGACGTTGGCAGATATATAGA
CTAATCCTGCCCAAGGGTTTGCTATCAATTTCGACGCAACCGCCCTTATC
CCCTGACACGAGCATTCAGTAGTCAACGTGAATGTGCGACGGCGTGCTTG
AGACCTTGGCTACCCTAGGTGCTCGAAGCTGTCGTCGACCAAAAAAAGAC
CAAAAAACTACGTTGACCCATTGAGTGCTCGTGTCAGGGGGTATGGGCGG
CGGCTTCGAAACTCATGGCAAATCGTTGGCAGGATCTGCCAACGTTGGCA
GCAAAAACTGGAGTGCCTGCCTTGGGAGATTTGTTATGATTCTTCAAAAA
ATGCGTGCACATACATTTGTAGACTAAGCCTGAATGCACCCATGTTTGCC
TTTTCCGGCGAGTAGTTCGATGCATCACCAACATAAGCGAGAGGAGCCTG
CTTTCTAGGTGCGTCATACATCGTTGTGCTCTGCTAACAACGCCCTCATC
GACATCACGCGTGCCTGCCGCAGGGTCAAACGCGCCCGATAGAACTGGTC
CGCGTGATTAAACCGAGCGTGACCATCGACGAGACAGGCGAGGTGATAAA
CACGAAGGAGTCGTTCAAGTTAAATACGCGAAACCTTCAGGATGTTGTGG
ATCAGGCGAAGGGTATGCCGATTGCCATCGTTTCTGTCGTCGGCGCGCTC
CGATCGGGCAAGTCATTCCTCCTGTCGTGCTTCCTGGATTGCCTCGAGGC
GCAAGAGGGACGGTGAGATACCTGGATCTGTGCATACAAAAGAAGTACCA
GGTATATATCTTCTTGCTTGTTGCTTTGAATCAACCCGGAACTCCTACTC
GTAGTCTTCTTTAGTATGTGAAAAGAATACGCGACGCTGTGGCGGCGCTT
TTGTTTCGCTCTTTGCGAGGTCAATGACATGGAAATGTGGATGGTTTAAC
CCCTTACCCCTAGGTAGCTAAATGTCGCCAATTTGGGTCACCACTTTGTA
TACTCGTCACTTGGAATATCACGTGACTCACAATAGCTGAACTTTTACCT
CGCTAACCGCTCAATTTCTAAACGCACTCTTTAGGTAAGTGAACGCGTCG
CCTTTCTGTTGGCGACGCGTTCACTTGCTTCTTTATAGAGCTTGTGTAAA
AGTATTTTCCATCATTTTTTACAGGGGTATACAAGGGTCAACAGAGGGGT
CGTGTGTGTGTGGTTATTTGTCTCTTTTGTGAAACGTATGCCGTAGGTGC
CCGAATACCCAAGCTCTACTGGTACAAGGCGTACCTGATGAATGGCAGCC
CAATCTCAACACGTGGCAAGTTTTTGTACGCGTGTGCATGCTCAACAGGT
GTTGGTATGATGAAGTCCACTATTTTTGTGGTAATGTGAAGGAGTAGACT
GCTCAGCCATCGGGTACAAGGTCAATGTTAAGATGTATAGTCCTCACTCG
GGTAAATGGTTTAACCTTTTACCCGATGGCTGAGCAGTCTACTCGTTCAC
ATTTGGCGTCGACCGTCGACGCCACATGTGAAGGAGTAGACTGCTCAGCC
ATCGGGTAAAAGGTCAACCATTTACCCGAGTGAGGACTACACCTCTTAAC
AGTAACATATGCCCCAGCTCGTTCATCTGTATTGCGCAAACCTTGACTCG
GGGGCGCGACAAGGGTTTTTGCGCTTGTTGTGTTTGGTAAACACCTGTAC
TTTTACCCTTCGTCCTGCCCATCTCAACTGAGCAGCTTCAATCCGGGAAC
ACAGAAAATTCCCATCTGCAGTGCGTGCCTTTGTTTTTGAGCTAACCGAC
GGTATCTTCACGTCAAAGAGTACCCCCGCGTAGATGTGTACAATGCGGTA
CATTTTCGTTTGGTTGCCCAGGGGAGCCCAACTTCGGTAGTTTACAACAT
ACGCCCCACCCCGTGCCTGATCATGATGTGGCATCTCGCGCCGGGACTGC
TGCATGCAATGCGCTGTCGCAGCGACGCTGACTTGAATGAAGGCCTCCTG
GGTGGGCACGGCCGCGAAGTCGGTTTTCCGTGGAAAGGGGGTTACAAGGG
TCACACACAAGGCATGTGGGTGTGGCCCAAGCCATTTATCCGAGAGGTGG
ACGATGGACAAGGAGGCCGCACCAGGATGGCCGTCTTGCTTGTCGACACC
CAGGGGTTGTTCGACACCACTGTCAACAGGCAGCTAGAGGCGTGCCTATT
CGGGCTCGCCACGACGGTGAGTGTGACCACGTGACTAATCAAGTACCAGT
GCTCGTAGGGAAAGGGGTGTATCATACGTACCTCGTTTATGTTCAGCTGC
GGACAAGAGTCGAGACACGCCCGCTTGGCACTGCCAACGGCAACAGCTGA
GTCCGTCGACATAGCTTTGTGCCGGACATTTTTGCGAAAGGCGTTGGTCT
CCCCCCACGCGCCCGCCGGTAGAACGAAACAGTCGTCGGGACTCATTGTT
AGCAGGTAGACACGCCCCGCCCCCCGACTCTCAACCCGCTGCGCGTTTTC
TTGACCGCGTCCGTCCAACAACGCTTGCAGCTGAGCTCTTGCCAGATCTT
CAACGTCATGAAACAAGTCGAGACCAATAAACTCGGCAGCCTTGCGGTCT
TCTTAGAGTACGGGACGGTCGGGAACGACAACAACAACGGAGGTGCTCAA
CGAAACGAAGCTCCTTTCCAGCGCCTAGAGATTCTCATCAGAGACTGGCA
ATGCTGGAAGGAAGAGGACGACCCCATGAAAAAAGCCCCCAAAAAGCTGC
ACAATGAGGTGGGTCCTCAACGAACGGAACGTGGCTGTCCTTTGGCGTTG
CTGTTGCTGCAACAGCCGTCCCTGCTTGTTGGGGTTTCGGGACTAACTCG
GGTGTGTAACTGCTCGAAGTCATTCCCGCGTTATGAGATAAAGACTTGGC
TCAACATCTTTGCACCTCTCCTGGTGAACGAGACCACCATGACGTTAACT
TCTTCCTACGCTCTTTAAAAGAACACGATGCTTTGCTTCGTGGCCGCAGA
GTGAACGAGACTGGCTCGCTCGACTCCAATGAAGTGAGATCCTGACCGCT
TCAGCCTGACGGCTTCTTAGTTCGGTTCGTGTCATTTCGTTAGACGCTGA
AGCTTGCACGTATCGCATAGGCACTGGGCTCCTACACGCCAAAAGTATTC
AAAGATAGCGTGTACCTGGATGTCCCCGCTGTATTTCGTGTGCAACACTC
TCGCAGTTCATCGCCTACCTGGATGAAACCTTGAGCAACCAGACAACGGA
CAGCACGAAGGTGAGGCATGGAGCGAGGTCGAGGTTGAGGGTGGCGGCAA
TGGAGCCGGCGTACCTGCTGTACAGCGATGAATTGCGCCGGAACTTTCGC
GGCCTTATAGGCGAAGCTGACCGTTGTGAAAAAGTTTAGCTCGTGCTTTC
TCTGTGGCATCGTAGGCCCAATGATTGACATGAAGCTTCGATCCTTCCGC
GCAACCTCGCTCAACCTTTCCAACAGATCAAGAACTGTTTCCTCGATCGT
ATCGGCTGCTTCGGCTTGCCCGACCCAGGGGAGAAGGTCACGTGCGACAC
TTTCGACGGCAAGATGAGCGACATCAACAGCGGGTTCCGGCGACTGCTGG
CCTTCTACATTGACACCGCAATCGTCGGGCAGGTGAGCCAGTTTTGTGAG
CCTCGCTATCCGTGGTCTCCCTCCCGTCCTTCAACGCTGGTAAGGCGAGC
TGTGGGAGTCTGACTGATGCACGGCAGTACGGTACCATTTGAAAAAGTGA
TGCCGTTGGGCCGAATACGCCAAACGATCCGCAGCCTTTTACCGCACGCA
CAAGATTTGGTACGTGCCACGAACGCCGTTTTCCAAGTCTGCGAAGCGCC
ATGCGGGAGTGGTCCAGTGTAAAGTTGTCTTAGCCGTTCTCGAGTTGGAT
TTACAGCTTAACCCCCATCGCCTCCAATCGCACCTGTTGCATTTTGCCCC
TTGCCTGTTTGCTTGGCAGCTCAAATCAAATGACCTTCCGAACCTCTCGA
ATCGAGGCGAGGGTGACTTTGTGAAGAGCGTGGGGGACTGGGTACAGCTT
TTCAGCGATGGCATGACAAACGGCAGGTTGCCGGATGCTCAGAGTTGGTT
GAGTCTGCTGTGGGACAAACAGAACCAATGCAGCTTGGACGACGTTTTCA
AGACATTTGAGGTCCGTCATCAAAGTGCACCCGCTTTGGTTCTGGTCTAT
CATACTGCTTGTTGGTTGCCCACTGACACAGCCAATGGTTTTTGTATAAT
TTCGAAGTAGTCGAGATCCCCTTGTCCACTTCTACTCCTGTAAAACACTG
TCACTCTACGTCGCGCCGTGGTTTAAATCTGCCTTGGGTAGTTTGGCTTC
CTGTGACCGCAAAGCTCTTCGTTCCTTCGCGGAATGCCCACTGCGACTCC
CAACAAACAAGAAACATGATGAATTGGAAATATTTGGGCAAGACCTTGAA
CAACAGCTTTCGACCCTGCCATACCTTTGGCCGTACGCGTTACAGAGGGA
CATGGACGAGAAGACCATCAATTTCGTAGATCCGGACGAGCTGGAAAAGC
TCCAGCAGGAGGGCAAGGAAGTGGCGATGAGCAGCTTCCAGCCGCGAGGT
GATGAAGAAACGCAGAAAAAAGCGAGAGAGGCGTTGCTTCGCAAGCTGGA
CAAGGAAACTAAGAGGTACTGGGGACAGGAAAAGACAACATCGAAGAAAC
ATGGCATGTATCCATATGCCACGATTGATGACTTCGTCGTTTTGTATGAC
GTGTTGCACCTCTGTCCGGTCGAGCAAAACATAATTTTCACTCAACACAA
TTCTACCTCTGGGCCGGTTTGCTGCTGGGGCATGATCTTACTTCAGTCGC
TCGGGGCATTTCGCTGAGGCTTTTTACATTTGATCGATACTGTACCATAA
ATGCTCTTCCAAAGAGCAACGACCGGATGGTGCAACCCCCCCATACATCC
ACCTTCGTCTGTAAACGGGCACAGTGGAGACATACTTGGTAGAATAGGAC
TCTTTGATTCCGTGCCAAACTCTCGCCGTTACTCGTACGAACCCGCGTGC
GGGCAGGATGAATGAGCGGAACGCTGCCATGAGCTCGTGGATGACCTACC
TGCGCACCACCTTCCTTCCGACGCTGTCCAAGGCATGCGAATATTGTTTG
AACGCTGCCATGAGCTCGTGGATGACCTACCTGCGCACCACCTTCCTTCC
GACGCTGTCCAAGGCATGCGAATATTGTTTGGCTGCAATCGGCCTAGTAT
TCAACGCCGTGGGGTTTTCGTCAGCGTGGGGCTCAGTGGTGCGGGCGTTT
GCGCTTGTTGCGGTAGTGGTAGCCGTAGGGTTACATTTTGTGACGACACA
TGTGGAGAGATTGTTGGCGTTCATGACGAATTGCGCGCAAATGCTTCTAT
TTGCGCTTGTTGTGGCAGTGATAGCTGTAGGATTACGTTTTGAGACGATA
CATGTGAAAAACTGTTGGCGTGCATGACGCCGAGGGCCGGGTAAACAAAG
CGTGTCATCCAGAAGGTTCTCGAGGGCTTGCGTTGGTCAGGGGAATACAC
CAACCATTGTCCAATGATGGACGATAAAACGGTCCATGTGGTGCTAACGT
GTCCTCCGTGGTGTTGAAAGAGGTTTTACAGTCATCGAGAAATATTTCAC
GTGCAGTCTTTTTCATGCGTAGCTGGCGTCTTTCGAAAATCACTTCTGGG
TGGTCGTTTAGGTTATTGAAATATTCGGGGACGGGGGAGACAACGTTATG
GCAAATGATGTCTCCAGGTGGCCTAGTCTGGCATTCCCGAATATTGACCG
CTGCGTCTCCACCTTCTACGCTGCGTGGCAAGAGACAAGTTTGGGGGAGA
CTGGTTGGCACCGCGTGTTCGGAGGTCTTATAGTATTGACCTCGGCAATC
GGGGTTGCTCCGTCGACTAGCGCCAATTTTGGGGTAGCTTTGAAGCTGAG
GGTGGGTGGAACGAGAGTCAACGTTTCGGGCAGTCAAGGCGGGGTTCACT
AGAGGGCAAGACACGTCATACAGCCCCGACACCTAGGCGTTCTTTTTTCT
TGACACATCTGAGATATGGGACTACTTGAGTATGGCATAAGAGTGG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig153:207336..220181+

>mRNA_P-littoralis_Contig153.64.7 ID=mRNA_P-littoralis_Contig153.64.7|Name=mRNA_P-littoralis_Contig153.64.7|organism=Pylaiella littoralis U1_48|type=CDS|length=1893bp|location=Sequence derived from alignment at P-littoralis_Contig153:207336..220181+ (Pylaiella littoralis U1_48)
ATGCAAAACAGCGCTTCGCCCAGCCACCCAGGAGCCCCAGGGGGAAATGC
CCAGACCTTTCCACCCCGCGAAGAGCGAGGAAGAAGCGAGGAGAGAGAGA
AAGAGCCGGTTAGTTCCGAGGCATCCAAGACAGCATGGCTCGTCGACAAA
GTAAAAGCACGTCTCAAAATAAAGAAGGACGCGATGCAGGGTCAAACGCG
CCCGATAGAACTGGTCCGCGTGATTAAACCGAGCGTGACCATCGACGAGA
CAGGCGAGGTGATAAACACGAAGGAGTCGTTCAAGTTAAATACGCGAAAC
CTTCAGGATGTTGTGGATCAGGCGAAGGGTATGCCGATTGCCATCGTTTC
TGTCGTCGGCGCGCTCCGATCGGGCAAGTCATTCCTCCTGTCGTGCTTCC
TGGATTGCCTCGAGGCGCAAGAGGGACGCGACGCTGACTTGAATGAAGGC
CTCCTGGGTGGGCACGGCCGCGAAGTCGGTTTTCCGTGGAAAGGGGGTTA
CAAGGGTCACACACAAGGCATGTGGGTGTGGCCCAAGCCATTTATCCGAG
AGGTGGACGATGGACAAGGAGGCCGCACCAGGATGGCCGTCTTGCTTGTC
GACACCCAGGGGTTGTTCGACACCACTGTCAACAGGCAGCTAGAGGCGTG
CCTATTCGGGCTCGCCACGACGCTGAGCTCTTGCCAGATCTTCAACGTCA
TGAAACAAGTCGAGACCAATAAACTCGGCAGCCTTGCGGTCTTCTTAGAG
TACGGGACGGTCGGGAACGACAACAACAACGGAGGTGCTCAACGAAACGA
AGCTCCTTTCCAGCGCCTAGAGATTCTCATCAGAGACTGGCAATGCTGGA
AGGAAGAGGACGACCCCATGAAAAAAGCCCCCAAAAAGCTGCACAATGAG
TTCATCGCCTACCTGGATGAAACCTTGAGCAACCAGACAACGGACAGCAC
GAAGATCAAGAACTGTTTCCTCGATCGTATCGGCTGCTTCGGCTTGCCCG
ACCCAGGGGAGAAGGTCACGTGCGACACTTTCGACGGCAAGATGAGCGAC
ATCAACAGCGGGTTCCGGCGACTGCTGGCCTTCTACATTGACACCGCAAT
CGTCGGGCAGCTCAAATCAAATGACCTTCCGAACCTCTCGAATCGAGGCG
AGGGTGACTTTGTGAAGAGCGTGGGGGACTGGGTACAGCTTTTCAGCGAT
GGCATGACAAACGGCAGGTTGCCGGATGCTCAGAGTTGGTTGAGTCTGCT
GTGGGACAAACAGAACCAATGCAGCTTGGACGACGTTTTCAAGACATTTG
AGAGGGACATGGACGAGAAGACCATCAATTTCGTAGATCCGGACGAGCTG
GAAAAGCTCCAGCAGGAGGGCAAGGAAGTGGCGATGAGCAGCTTCCAGCC
GCGAGGTGATGAAGAAACGCAGAAAAAAGCGAGAGAGGCGTTGCTTCGCA
AGCTGGACAAGGAAACTAAGAGGATGAATGAGCGGAACGCTGCCATGAGC
TCGTGGATGACCTACCTGCGCACCACCTTCCTTCCGACGCTGTCCAAGGC
ATGCGAATATTGTTTGAACGCTGCCATGAGCTCGTGGATGACCTACCTGC
GCACCACCTTCCTTCCGACGCTGTCCAAGGCATGCGAATATTGTTTGGCT
GCAATCGGCCTAGTATTCAACGCCGTGGGGTTTTCGTCAGCGTGGGGCTC
AGTGGTGCGGGCGTTTGCGCTTGTTGCGGTAGTGGTAGCCGTAGGGTTAC
ATTTTGTGACGACACATGTGGAGAGATTGTTGGCGTTCATGACGAATTGC
GCGCAAATGCTTCTATTTGCGCTTGTTGTGGCAGTGATAGCTGTAGGATT
ACGTTTTGAGACGATACATGTGAAAAACTGTTGGCGTGCATGA
back to top