mRNA_P-littoralis_Contig153.62.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig153.62.1 vs. uniprot
Match: A0A7S2SIT7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SIT7_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.560e-13 Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 13 PFQRLEILIRDWQCWKEQDDPMEKAPKKLHDEFLEYLDAMLAGGSTTD----SAKIKACFRDLGCFGLPGPGEKVCCNSFDGKISDISDGFKKLLPYYIKTV 306
PFQRLE+L+RDWQ + + D +E+ +HD+ YLD +L D +IK CF D+ C+ LP PG +V +FDG I IS F++L YI+ V
Sbjct: 233 PFQRLELLVRDWQDFHDIDGTLEE----IHDDMRSYLDEVLRERRQKDLKEVREQIKLCFEDVSCWLLPHPGMEVIKKTFDGDIDKISPEFRRLAADYIRRV 330
BLAST of mRNA_P-littoralis_Contig153.62.1 vs. uniprot
Match: A0A2R5L3V0_9ACAR (Putative guanylate-binding protein (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5L3V0_9ACAR) HSP 1 Score: 61.2 bits (147), Expect = 1.520e-8 Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 1
Query: 1 RNEAPFQRLEILIRDWQCWKEQDDPMEKAPKKLHDEFLEYLDAMLAGGSTTDSAKIKACFRDLGCFGLPGPGEKVCCNSFDGKISDISDGFKKLLPYYI 297
+N+ FQ+L LIRDWQ E+ + K + + D +LE + S I++ +L CF LPGPG++V FDGK+SDIS+ FKK L + I
Sbjct: 165 KNKEAFQKLLFLIRDWQYPDEKPFGL-KGGQAMLDHWLERKPGLHPEVSELRE-NIRSSVNELECFLLPGPGDRVQSKLFDGKLSDISEDFKKHLAHII 261
BLAST of mRNA_P-littoralis_Contig153.62.1 vs. uniprot
Match: A0A7S1CG62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CG62_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 6.640e-7 Identity = 30/103 (29.13%), Postives = 55/103 (53.40%), Query Frame = 1
Query: 13 PFQRLEILIRDWQCWKEQDDPMEKAPKKLHDEFLEYLDAMLAGGSTTDSAKIKACFRDLGCFGLPGPGEKVCCNSFDGKISDISDGFKKLLPYYIKTVILDQL 321
PFQ LE+L+RDWQ +++++D + K ++ +E L + G A ++ F + CF LP PG+ + +DG + + F ++L Y+ +V + L
Sbjct: 449 PFQTLEMLVRDWQHFEDEED-VAKCRAEMDEELQRILSSDFEEGVQAREA-VQGAFDSVKCFLLPHPGKALTRPKYDGSVDGLDAAFLRMLEEYVHSVFSEDL 549
BLAST of mRNA_P-littoralis_Contig153.62.1 vs. uniprot
Match: UPI00192F5658 (atlastin-2 isoform X1 n=2 Tax=Colubroidea TaxID=34989 RepID=UPI00192F5658) HSP 1 Score: 55.8 bits (133), Expect = 1.190e-6 Identity = 42/98 (42.86%), Postives = 52/98 (53.06%), Query Frame = 1
Query: 7 EAPFQRLEILIRDWQCWKEQDDPMEKA-PKKLHDEFLEY-LDAMLAGGSTTDSAK--IKACFRDLGCFGLPGPGEKVCCN-SFDGKISDISDGFKKLL 285
+ PFQ L LIRDW P E A K +FLE L L + + I +CF +LGCF LP PG KV N SFDG+++DI + FKK L
Sbjct: 221 QKPFQTLMFLIRDWSY------PYEHAYGLKGGKQFLEKRLQVKLHQHEELQNVRKHIHSCFSNLGCFLLPHPGLKVATNPSFDGRLNDIDEEFKKEL 312
BLAST of mRNA_P-littoralis_Contig153.62.1 vs. uniprot
Match: UPI0006D92D33 (atlastin-2 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0006D92D33) HSP 1 Score: 55.1 bits (131), Expect = 1.850e-6 Identity = 40/97 (41.24%), Postives = 49/97 (50.52%), Query Frame = 1
Query: 7 EAPFQRLEILIRDWQCWKEQDDPMEKAPKKLHDEFLEY-LDAMLAGGSTTDSAK--IKACFRDLGCFGLPGPGEKVCCN-SFDGKISDISDGFKKLL 285
+ PFQ L LIRDW E +E K FLE L L + + I +CF+ + CF LP PG KV N SFDG++ DI D FKK L
Sbjct: 167 QKPFQTLTFLIRDWSYPYEHAYGLEGGRK-----FLEKRLQVKLTQHEELQNVRKHIHSCFKKISCFLLPHPGLKVATNPSFDGRLIDIDDEFKKEL 258
BLAST of mRNA_P-littoralis_Contig153.62.1 vs. uniprot
Match: UPI0006D4D9D3 (atlastin n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4D9D3) HSP 1 Score: 55.1 bits (131), Expect = 2.220e-6 Identity = 35/106 (33.02%), Postives = 51/106 (48.11%), Query Frame = 1
Query: 13 PFQRLEILIRDWQCWKEQD----------DPMEKAPKKLHDEFLEYLDAMLAGGSTTDSAKIKACFRDLGCFGLPGPGEKVCCN-SFDGKISDISDGFKKLLPYYI 297
PFQ+LE L+RDW E D + + ++ H E I +CF ++GCF +P PG KV + +FDGK+SD+ D FKK L ++
Sbjct: 213 PFQKLEFLVRDWSYPYEADYGVIGGRLILERRLRVCERQHPELQSI------------RKHIHSCFSEIGCFLMPHPGLKVATSPTFDGKLSDMDDVFKKYLKIFV 306
BLAST of mRNA_P-littoralis_Contig153.62.1 vs. uniprot
Match: A0A6J1NA34_BICAN (atlastin-like n=1 Tax=Bicyclus anynana TaxID=110368 RepID=A0A6J1NA34_BICAN) HSP 1 Score: 54.3 bits (129), Expect = 4.090e-6 Identity = 37/106 (34.91%), Postives = 54/106 (50.94%), Query Frame = 1
Query: 13 PFQRLEILIRDWQCWKEQ----DDPMEKAPKKL--HDEFLEYLDAMLAGGSTTDSAKIKACFRDLGCFGLPGPGEKVCCN-SFDGKISDISDGFKKLLPYYIKTVI 309
PFQRL++L+RDW E + E K+L H+ L ++ I +CF +L CF +P PG KV N F+GK+SDIS FK L ++ ++
Sbjct: 187 PFQRLQLLVRDWSFPYEHAYGAEGGRELLDKRLTVHEGQHHELQSL--------RKHIASCFEELACFLMPHPGLKVATNPEFNGKLSDISQDFKNSLRQFVPMLL 284
BLAST of mRNA_P-littoralis_Contig153.62.1 vs. uniprot
Match: A0A821T6V8_9NEOP (Hypothetical protein n=4 Tax=Pieris TaxID=7115 RepID=A0A821T6V8_9NEOP) HSP 1 Score: 53.9 bits (128), Expect = 5.570e-6 Identity = 39/119 (32.77%), Postives = 61/119 (51.26%), Query Frame = 1
Query: 13 PFQRLEILIRDWQCWKEQ----DDPMEKAPKKLHDEFLEYLDAMLAGGSTTDSAKIKACFRDLGCFGLPGPGEKVCCN-SFDGKISDISDGF----KKLLPYYI--KTVILDQLTETSL 336
PFQRL++L+RDW E D K+L ++++ + I ACF +L CF +P PG V N +FDGK+SDIS F ++L+P + + ++L ++ E L
Sbjct: 186 PFQRLQLLVRDWSFPYEHPYGADGGASLLEKRLEIHEGQHVELQ------SIRRHIAACFEELACFLMPHPGLNVATNPNFDGKVSDISPEFQTSLRQLVPMLLAPENLVLKKIAEQQL 298
BLAST of mRNA_P-littoralis_Contig153.62.1 vs. uniprot
Match: UPI0015B31452 (atlastin-2-like isoform X1 n=6 Tax=Elopomorpha TaxID=32521 RepID=UPI0015B31452) HSP 1 Score: 53.1 bits (126), Expect = 1.050e-5 Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = 1
Query: 13 PFQRLEILIRDWQCWKEQDDPMEKAPKKLHDEFLEY-LDAMLAGGSTTDSAK--IKACFRDLGCFGLPGPGEKVCCN-SFDGKISDISDGFKKLLPYYIKTVI 309
PFQ L LIRDW E + ++ + FLE L + + I +CF ++GCF LP PG +V N SFDG++ DI D FKK L + + ++
Sbjct: 235 PFQTLMFLIRDWSYPYEHNYGLDGGRR-----FLEKRLQVKQNQHEELQNVRKHIHSCFSNIGCFLLPHPGLRVATNPSFDGRLKDIDDEFKKELKHLVPLLL 332
BLAST of mRNA_P-littoralis_Contig153.62.1 vs. uniprot
Match: H0WLH2_OTOGA (Atlastin GTPase 2 n=1 Tax=Otolemur garnettii TaxID=30611 RepID=H0WLH2_OTOGA) HSP 1 Score: 52.8 bits (125), Expect = 1.430e-5 Identity = 39/97 (40.21%), Postives = 48/97 (49.48%), Query Frame = 1
Query: 7 EAPFQRLEILIRDWQCWKEQDDPMEKAPKKLHDEFLEY-LDAMLAGGSTTDSAK--IKACFRDLGCFGLPGPGEKVCCN-SFDGKISDISDGFKKLL 285
+ PFQ L LIRDW E +E + FLE L + + I CF +LGCF LP PG KV N SFDG++ DI D FK+ L
Sbjct: 215 QKPFQTLMFLIRDWSYPYEHSYGLEGGKQ-----FLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKDIDDDFKREL 306 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig153.62.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig153.62.1 >prot_P-littoralis_Contig153.62.1 ID=prot_P-littoralis_Contig153.62.1|Name=mRNA_P-littoralis_Contig153.62.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=117bp RNEAPFQRLEILIRDWQCWKEQDDPMEKAPKKLHDEFLEYLDAMLAGGSTback to top mRNA from alignment at P-littoralis_Contig153:194285..199171- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig153.62.1 ID=mRNA_P-littoralis_Contig153.62.1|Name=mRNA_P-littoralis_Contig153.62.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4887bp|location=Sequence derived from alignment at P-littoralis_Contig153:194285..199171- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig153:194285..199171- >mRNA_P-littoralis_Contig153.62.1 ID=mRNA_P-littoralis_Contig153.62.1|Name=mRNA_P-littoralis_Contig153.62.1|organism=Pylaiella littoralis U1_48|type=CDS|length=351bp|location=Sequence derived from alignment at P-littoralis_Contig153:194285..199171- (Pylaiella littoralis U1_48)back to top |