prot_P-littoralis_Contig153.37.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig153.37.2
Unique Nameprot_P-littoralis_Contig153.37.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length196
Homology
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.510e-43
Identity = 94/217 (43.32%), Postives = 130/217 (59.91%), Query Frame = 0
Query:    1 MDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRG 190
            MDQTP+Q E P +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF+                               +PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E +   L   A T+V+++ GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG
Sbjct:  120 MDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSG-KLKPPERG 334          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 4.050e-43
Identity = 92/215 (42.79%), Postives = 127/215 (59.07%), Query Frame = 0
Query:    1 MDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYGRSGQKVTAPSRG 190
            MDQTP+Q E P +TT+EKTG K A ++TGGE EK R+T+VLAV  DG+KV  RII+ G PF+  T +                         G+PA G+S GVQ+ SW D  + + W +  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R++YT++          K+  P RG
Sbjct:   54 MDQTPVQHEMPVETTLEKTGAKDARVSTGGE-EKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARSGKLKPPERG 267          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 1.010e-42
Identity = 96/217 (44.24%), Postives = 130/217 (59.91%), Query Frame = 0
Query:    1 MDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRG 190
            MDQTP+Q E P +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF   T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + G LTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG
Sbjct:  120 MDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSG-KLKPPERG 334          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 1.900e-42
Identity = 94/217 (43.32%), Postives = 129/217 (59.45%), Query Frame = 0
Query:    1 MDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRG 190
            MDQ P+Q E P +TT++KTG K A I+TGG  EK R+T+VLAV  DG+KV PRII++G PF+  T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH +E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG
Sbjct:  314 MDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSG-KLKPPERG 529          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 4.570e-42
Identity = 85/197 (43.15%), Postives = 116/197 (58.88%), Query Frame = 0
Query:    1 MDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVG------------------------GTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSW 172
            MDQTP+Q E P +T++EKTG K A I TGG+ EK R+T+ LAV GD +KV  R I+KG P +                           +  GYP GG+S GVQ+ SWCD  +   W+   +  RP + S   QRP +LVLDDF+CH+++ F  +L   A T+V+ + GGLTP+ QPLDR +NK  KR +R  YT++
Sbjct:   58 MDQTPVQHEMPVETSLEKTGAKDARIATGGK-EKERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEMLPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTIVIFIPGGLTPLLQPLDRMLNKRMKRLLRGMYTNY 253          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 3.340e-40
Identity = 91/217 (41.94%), Postives = 126/217 (58.06%), Query Frame = 0
Query:    1 MDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRG 190
            MDQTP+Q E P +TT+EKTG K A I+TGG+ E+ R+ +VLAV  DG+KV PRI +KG PF   T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+ H++E F   L   A T+V+ + GGLTP+ QPLD  +NK+ KR +R +Y ++        RSG K+  P RG
Sbjct:    1 MDQTPVQHEMPVETTLEKTGAKDARISTGGK-EQERFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAYSASAVADARSG-KLKPPERG 215          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 3.010e-38
Identity = 88/192 (45.83%), Postives = 111/192 (57.81%), Query Frame = 0
Query:    1 MDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVR 166
            MDQTP+Q E P +TT+EK G K A I+TGG+ EK R+T  LAV  DG KV  RII+KG PF+                             FGYP  G+   VQ+ SWCD  +   W+++ +  RP  GS  + QR S+LVLDDFRCHR E F K L     T V+++ GGLTP+ QPLDR +NKE KR +R
Sbjct:  189 MDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIK-QRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMR 378          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.930e-37
Identity = 87/197 (44.16%), Postives = 114/197 (57.87%), Query Frame = 0
Query:    1 MDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 171
            MDQTP+Q E P +TT+E TG K A I TGG+ EK R+T+ LAV  DG+KV  RII+KG PFV                           +  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + GGL P+ QPLDR +NK+ KR +R  YT+
Sbjct:  274 MDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTA 468          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5KKC9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC9_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 4.310e-33
Identity = 81/200 (40.50%), Postives = 110/200 (55.00%), Query Frame = 0
Query:    1 MDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQK-VRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIR 174
            MDQTP+Q E P +TT+EKTG K A I+TGG   +          G  QK V PRII++G PF+  T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+   GGLTP+ QPLDR +NK+ KR +R    S +R
Sbjct:  183 MDQTPVQHEMPVETTLEKTGAKDARISTGGGQREGTLHARSGCHGGRQKNVSPRIIFQGTPFIPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFTPGGLTPLLQPLDRTLNKQMKRLLRGNVGSSLR 382          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.180e-31
Identity = 88/215 (40.93%), Postives = 117/215 (54.42%), Query Frame = 0
Query:   11 PPDTTVEKTGTKSACITTGGETEKLRYTV----VLAVR----GDGQKVRPRIIYKGNPFVGGT-----------NNF-------------GYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRG 190
            P +TT+E+TG K A ITTGGE E L  +      L VR    G  QKV PRII KG PF+  T            N+             G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDD +CH+ E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG
Sbjct:    2 PGETTLEETGAKDARITTGGEGELLFLSKQREGTLHVRSGCHGGRQKVLPRIIVKGTPFIPPTVSGKGKSTLPRKNYVAWENHPANRAEHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSG-KLKPPERG 215          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUK2_9PHAE1.510e-4343.32DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE4.050e-4342.79DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE1.010e-4244.24DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.900e-4243.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXD3_ECTSI4.570e-4243.15DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KT06_9PHAE3.340e-4041.94DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE3.010e-3845.83Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K8Y4_9PHAE1.930e-3744.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKC9_9PHAE4.310e-3340.50DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KQK9_9PHAE1.180e-3140.93DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 36..175
e-value: 5.8E-13
score: 48.9
NoneNo IPR availablePANTHERPTHR19303:SF7SUBFAMILY NOT NAMEDcoord: 1..174
NoneNo IPR availablePANTHERPTHR19303TRANSPOSONcoord: 1..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig153contigP-littoralis_Contig153:115196..116370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig153.37.2mRNA_P-littoralis_Contig153.37.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig153 114917..116459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig153.37.2 ID=prot_P-littoralis_Contig153.37.2|Name=mRNA_P-littoralis_Contig153.37.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=196bp
MDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKV
RPRIIYKGNPFVGGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMR
RPGSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVC
QPLDRNINKEFKRGVRARYTSWIRDNYGRSGQKVTAPSRGWSRRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom