mRNA_P-littoralis_Contig153.15.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig153.15.2 vs. uniprot
Match: D7G3T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T3_ECTSI) HSP 1 Score: 179 bits (453), Expect = 2.210e-45 Identity = 110/238 (46.22%), Postives = 119/238 (50.00%), Query Frame = 2
Query: 929 PERPGGGTMSTSKTTPDTINAGRSRGGDRLLGECSLNLVEVVSGRAPHVQEWVPLDSEGDLRLSLDYDSVGGEPVPGDSVVLLCLSNRLDFFPLPVWNAVEDPSRPWSPSWLWARSASHWLPGRASSSGGSSGDGFRVEEAGDDFFLVSYATPEGWRCAVEVHRFLVYPDPTAPQRWTLSSVRDHVITTPAAAAFRGAVLRASQEESALDGGKQLAISVVEGISWTAARWWGGGLNRA 1642
PE P G T+ T DRLLGECSLNLVEVVSGRAPHV+EWVPLDSEG+LRLSLDYDSV PVPGDSV YPDPTAPQRWTLS VRDH TPAAAA RGAVLRASQEESA +GGK LA++V+EG+SWTA RWW GGL+RA
Sbjct: 219 PEDPAGTTLMGGNTXXXXXXXXXXXN-DRLLGECSLNLVEVVSGRAPHVEEWVPLDSEGELRLSLDYDSVRELPVPGDSV---------------------------------------------------------------------------------------YPDPTAPQRWTLSGVRDHAAATPAAAAIRGAVLRASQEESAWEGGKTLALNVLEGVSWTAKRWWSGGLDRA 368
BLAST of mRNA_P-littoralis_Contig153.15.2 vs. uniprot
Match: A0A6H5KRG9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRG9_9PHAE) HSP 1 Score: 168 bits (425), Expect = 6.750e-44 Identity = 99/190 (52.11%), Postives = 121/190 (63.68%), Query Frame = 3
Query: 186 VEDNQLEVGCLHVGLLAVRNMKQIKQGGMGGLFGLTPQHKPYCKITLGKHEFTSGVGARTTAGHAWNREQMFFPVKVPISCVVGVSEQWHETARSKSSDSRESYLNRQGGGKGTTGAPGCTSSGWRRDQATVGAKSXXXXXXXXXXXXXXXXXXXXCGSSLSRATAATNEAAAHDVWSQLTLRVQVYHRE 755
VED LEVG LHVGL+A R++K++KQGG+ + GL+PQ PYC+ TLG++EFTSGVG RTT GH+WNREQ+FFPVKVPISCV+G S Q + TA S S S NR+ G KG A T G + G+ S CGSSLSRA AA + AAAH VW+ L+LR QV+HRE
Sbjct: 6 VED-MLEVGSLHVGLIAARDVKRVKQGGVSDMLGLSPQASPYCRFTLGEYEFTSGVGVRTTGGHSWNREQIFFPVKVPISCVIGGSGQSYHTAGSGSDGSS---TNRRKGTKGPRKA--ATPGGQPKSGGKGGSGSVA------------------CGSSLSRAVAA-DAAAAHGVWNHLSLRAQVFHRE 170
BLAST of mRNA_P-littoralis_Contig153.15.2 vs. uniprot
Match: A0A6H5KDQ7_9PHAE (U-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ7_9PHAE) HSP 1 Score: 127 bits (319), Expect = 8.380e-31 Identity = 64/81 (79.01%), Postives = 66/81 (81.48%), Query Frame = 2
Query: 1919 PSQQQ-----QHLCPITRCLMEDPAVAADGYTYERSAIERWLSEHDTSPVTGNALETKVVFKNWSLVSSLSPTSSVTAPGT 2146
P QQQ QHLCPITRC MEDPAVAADGYTYER+AIERWLSEHDTSPVTG ALETKVVFKNWSLVSS S + PGT
Sbjct: 32 PQQQQHQXQHQHLCPITRCPMEDPAVAADGYTYERTAIERWLSEHDTSPVTGKALETKVVFKNWSLVSSSPSPSFSSEPGT 112
BLAST of mRNA_P-littoralis_Contig153.15.2 vs. uniprot
Match: D7G3T4_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T4_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 9.860e-22 Identity = 49/60 (81.67%), Postives = 51/60 (85.00%), Query Frame = 2
Query: 1964 MEDPAVAADGYTYERSAIERWLSEHDTSPVTGNALETKVVFKNWSLVSSLSPTSSVTAPG 2143
MEDPAVAADGYTYER+AIE WLSEHDTSPVTG ALETKVVFKNWSLVSS S + PG
Sbjct: 1 MEDPAVAADGYTYERTAIECWLSEHDTSPVTGKALETKVVFKNWSLVSSSPSPSFSSEPG 60
BLAST of mRNA_P-littoralis_Contig153.15.2 vs. uniprot
Match: A0A7S2P503_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P503_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.360e-21 Identity = 110/408 (26.96%), Postives = 156/408 (38.24%), Query Frame = 2
Query: 962 SKTTPDTINAGRSRGGDRLLGECSLNLVEVVSGRAPHVQEWVPL-----DSE--GDLRLSLDYDSVGGEPVPGDSVVLLCLSNRLDFFPLPVWNAVEDPSRPWSPSWLWARSASHWLPGRASSSGGSSGDGFRVEEAGD-DFFLVSYATPEGWRCAVEVHRFLVYPDPTAPQRWTLSSVRDHVIT-------TPAAAAFRGAVLRASQEESALDGGKQLAISVVEGISWTAARWWGGGLNRARDDLWFAVGLTTPESPDESHQNQQNRDGEDEGEREEDRVGAGNEERKKQDGDRDDECKEAMAAAPAAVTGRERDSAMAATSVVNAPPELSPPPSQQQQHLCPITRCLMEDPAVAADGYTYERSAIERWLSEHDTSPVTGNALETKVVFKNWSLVSSLSPTSSVTAP 2140
SK + D G SR D LGEC +N++++++GR P EW+ L D E G++R+ ++Y+ P PGD L D +P+P + F V+ D D ++SY +PEGW C VHR++V + L +D +++ +P A V R DG + I V G +RW+ GG++ A +DL A L S H + D D + P + T E S V + E P CPIT M DP VAADG+TYERSAI RWL + SP+TG L K + N+SL+ S P
Sbjct: 95 SKVSDDVSGKG-SR--DVFLGECHINILDILTGRLPCFDEWISLVDDNKDEEYIGEVRVVIEYEPTDSAPRPGDMCRLTSFCQLKDVYPIPAHHV------------------------------------FLVDNVEDNDNVILSYTSPEGWLCTFCVHRYMVVC--AVRHQAALEIYQDEILSLVNKFAESPMKGALTDVVKRVPD-----DGLMDIGIDVALGTQTLLSRWFSGGIDTAMEDLINATNLDGRHSIASFHTSNS-----------------------ATSHDSDSIVDQVSLDLPESETLHEVSS-----HVFDDDKEALP-----NMPCCPITGERMRDPVVAADGHTYERSAIARWLQQSGKSPLTGKELPHKELVTNYSLIERCSTDYDAKVP 423
BLAST of mRNA_P-littoralis_Contig153.15.2 vs. uniprot
Match: K0RBR6_THAOC (U-box domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RBR6_THAOC) HSP 1 Score: 93.6 bits (231), Expect = 7.790e-16 Identity = 100/389 (25.71%), Postives = 155/389 (39.85%), Query Frame = 2
Query: 1010 DRLLGECSLNLVEVVSGRAPHVQEWVPLDSEGDL---------RLSLDYDSVGGEPVPGDSVVLLCLSNRLDFFPLP---VWNAVED--PSRPWSPSWLWARSASHWLPGRASSSGGSSGDGFRVEEAGDDFFLVSYATPEGWRCAVEVHRFLVYPDPTAPQRWTLSSVRDHVITTPAAAAFRGAVLRASQEESAL--------DGGKQLAISVVEGISWTAARWWGGGLNRARDDLWFAVGLTTPESPDESHQNQQNRDGEDEGEREEDRVGAGNEERKKQDGDRDDECKEAMAAAPAAVTGRERDSAMAATSVVNAPPELSPPPSQQQQHLCPITRCLMEDPAVAADGYTYERSAIERWLSEHDTSPVTGNALETKVVFKNWSLVSS 2110
D +G+ S+ + ++SG+ P+ E+ L + D+ R+ L+Y+ + P PGD +S ++ +P+P + N V S S ++ S +RVEE D ++SY +PE W C EVHR+L+ + + ++HV+ F + ++ ES +G ++ VVEG A +WW G+ A +D+ A L D + + D EE+ G+EE G E T + P P CPIT M P VAADG+TYERSAI RWL D SP+TG + + N+ L+SS
Sbjct: 239 DYFIGQASIQVTPILSGKIPYFDEYCTLYNGSDIAAQSEAGRVRVILEYEPLDPPPRPGDVCCFANVSQAIELYPIPHRTISNTVRPVASSTSMSTXXXXXXXXXXXXXXXXXTTVTSQPKTYRVEEVVGDHVVLSYESPERWLCTFEVHRYLLLT--VERHQAVVEKAKEHVLD------FVDNISQSPMIESLAHTIDKIPDEGLVYVSADVVEGGIGLAGKWWESGIQGAVEDIVNAANL------DGRYCHYSISD------EEEEEESFGDEE------------------------GTEEPQRRVKTYQNSEDDAAEPLPGMPN---CPITGTPMIHPVVAADGHTYERSAIARWLETSDRSPLTGQRMAHSNLAPNYLLLSS 580
BLAST of mRNA_P-littoralis_Contig153.15.2 vs. uniprot
Match: A0A448YZM3_9STRA (U-box domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZM3_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.360e-14 Identity = 100/408 (24.51%), Postives = 155/408 (37.99%), Query Frame = 2
Query: 1010 DRLLGECSLNLVEVVSGRAPHVQEWVPLDSEGD------------------------LRLSLDYDSVGGEPVPGDSVVLLCLSNRLDFFPLPVWNAVEDPSRPWSPSWLWARSASHWLPGRASSSGGSSGDGFRVEEAGDDFFLVSYATPEGWRCAVEVHRFLVYPD-----PTAPQRWTLSSVRDHVITTPAAAAFRGAVLRASQEESALDGGKQLAISVVEGISWTAARWWGGGLNRARDDLWFAVGLTTPESPDESHQNQQNRDGEDEGEREEDRVGAGNEERKKQDGDRDDECKEAMAAAPAAVTGRERDSAMAATSVV-NAPPELSPPPSQQQQHL-----CPITRCLMEDPAVAADGYTYERSAIERWLSEHDTSPVTGNALETKVVFKNWSLVSSLSPTSS 2128
D LG S++L + +G P + EWVPL +R+ +Y+ P PGD + D +PL +PSR + + G+G V ++SY +PEGW + + HR +++ + P + L ++ + + +P AA R DG +A +V+G ++ RW+ GG++ DL L +G +D +G E E + A++ D A S + P L P QQ + L CPIT M DP VAADG+TYER AI RWL D SP+TG+ L K + N+ L+SS+ ++
Sbjct: 241 DAFLGMASIDLAALFTGMVPELDEWVPLHGTASDHHHVGHQEHYRSSNRHRTTRGAAVRIVCEYEPSDAPPKPGDICRFTKFCHPRDLYPL-------EPSRSYKVDTV-------------------RGNGTAV--------ILSYESPEGWLLSFQAHRNMLFTEERHVSPLNTAQDELQTLGERLAVSPLIAAVTETAERVLD-----DGLVGIAGEIVKGSAFVFDRWFRGGVDTVIRDLRDVTNL--------------------DGRHNQDAIG---------------ESLEIGLGSSASLDDASDDGVDNAESCAEHEPAALDPIEEQQGEALPNMPPCPITGFPMVDPVVAADGHTYERRAIRRWLGTSDKSPMTGSVLLHKELVPNYGLLSSIEEAAT 574
BLAST of mRNA_P-littoralis_Contig153.15.2 vs. uniprot
Match: B8LBQ9_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBQ9_THAPS) HSP 1 Score: 89.0 bits (219), Expect = 2.890e-14 Identity = 112/416 (26.92%), Postives = 176/416 (42.31%), Query Frame = 2
Query: 1010 DRLLGECSLNLVEVVSGRAPHVQEWVPLDSE-------------------GDLRLSLDYDSVGGEPVPGDSVVLLCLSNRL--DFFPLP---VWNAVEDPSRPWSPSWLWARSASHWLPGRASSSGGSSGDG---------FRVEEAGDDFFLVSYATP-EGWRCAVEVHRF---LVYPDPTAPQRW---TLSSVRDHVITTPAAAAFRGAVLRASQEESALDGGKQLAISVVEGISWTAARWWGGGLNRARDDLWFAVGLTTPESPDESHQNQQNRDGEDEGEREEDRVGAGNEERKKQDGDRDDECKEAMAAAPAAVTGRERDSAMAATSVVNAPPELSPPPSQQQQHLCPITRCLMEDPAVAADGYTYERSAIERWLSEHDTSPVTGNALETKVVFKNWSLVSSLSPTSSVTA 2137
D LLG+CS+N++ +++G+A + EW L + G +R+ ++Y+ P PGD+ V + + L + +P+P + NA S S A ++ L ++ S G + FRVEE D ++SY TP EGW E+HR+ + +++ TL V D++ +P V +E G A +V G++ RWW G+ A +D+ + LT + SH + D+ G GN + A ++V + ++ +ATS+ L P CPIT M DP VAADG+TYER+AI RWL + SP+TG L + N+ L+SSL S A
Sbjct: 330 DYLLGKCSINVLRILTGKASYFDEWCTLHDDNLHNNNSGKDKRSNNGSEAGRVRIVIEYEPTDPPPRPGDTCVFANMYSPLVEELYPIPSHSIRNAPRSVRSSTSMSSFGASTSCTTLSSASTFSTGPNASASSLVCQPKQFRVEEVVGDHVVLSYQTPNEGWTITFEIHRYNLLCTHRHQAVVEKYKDLTLDLV-DNISQSPMVEIIAKKVETLPEEGLVYVG----AEAVGGGVA-LLGRWWETGVGGAMEDI---LDLTNLDGR-YSHLS-------DDXXXXXXXXGDGN----------------SGAQKGSSVALQSDAASFSATSLQEEKEALPGMPC------CPITGLPMIDPVVAADGHTYERNAIHRWLQTSNRSPLTGAELAHLDLVPNYLLLSSLGGGSKEKA 706
BLAST of mRNA_P-littoralis_Contig153.15.2 vs. uniprot
Match: A0A7S1ZGT9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZGT9_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.990e-14 Identity = 105/395 (26.58%), Postives = 154/395 (38.99%), Query Frame = 2
Query: 1010 DRLLGECSLNLVEVVSGRAPHVQEWVPLD------------------SEGDLRLSLDYDSVGGEPVPGDSVVLLCLSNRLDFFPLPVWNAVEDPSRPWSPSWLWARSASHWLPGRASSSGGSSGDGFRVEEAGDDFFLVSYATPE-GWRCAVEVHRFLVY---PDPTAPQRWT--LSSVRDHVITTPAAAAFRGAVLRASQEESALDGGKQLAISVVEGISWTAARWWGGGLNRARDDLWFAV---GLTTPESPDESHQNQQNRDGEDEGEREEDRVGAGNEERKKQDGD-RDDECKEAMAAAPAAVTGRERDSAMAATSVVNAPPELSPPPSQQQQHLCPITRCLMEDPAVAADGYTYERSAIERWLSEHDTSPVTGNALETKVVFKNWSLVSS 2110
D LG S+N+ +++G+ + EW PL S G++RL +Y+ P GD + D +P+P H L FRV+E D ++SY T E GW C VHRF V A +R+ L + ++ +P V +E DG + +V G RW GG+ A DD+ G TP D +N Q E + G +EE ++ D R D ++ + G + ++T+ + L+ + CPIT M+DP VAADG+TYER AI RWL D SP+TG L K + N+ L+SS
Sbjct: 245 DISLGFTSINIRHLLTGKVTIIDEWFPLSDNGTNSDDXXXSDDIYSYSAGEVRLLCEYEPTDPPPRTGDLCRITGFCCPTDLYPVPA----------------------HLL--------------FRVDEMDGDDIILSYKTEEEGWHCTFVVHRFSVICAKRHQAAIERYREGLVDAANKLVHSP----LVKVVAETVKERMPEDGVLFVGADIVLGGFGLIGRWAKGGIGTALDDVVNVTNWDGRHTPRLLDNDDENVQI---------EINNAGMSDEENEEDTADYRADIYQDELDGLQDMNNGNAMEELSSSTTTSLS--SLTAVATTTTLPCCPITGQPMKDPVVAADGHTYERHAIRRWLQTSDMSPLTGQTLSHKELVPNYLLLSS 588
BLAST of mRNA_P-littoralis_Contig153.15.2 vs. uniprot
Match: A0A7S1UIP8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIP8_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 3.350e-14 Identity = 67/223 (30.04%), Postives = 97/223 (43.50%), Query Frame = 2
Query: 1016 LLGECSLNLVEVVSGRAPHVQEWVPLDSEGDLRLSLDYDSVGGEPVPGDSVVLLCLSNRLD--FFPLPVWNAVEDPSRPWSPSWLWARSASHWLPGRASSSGGSSGDGFRVEEAGDDFFLVSYATPEGWRCAVEVHRFLVYPDPTAPQRW--TLSSVRDHVITTPAAAAFRGAVLRASQEESALDGGKQLAISVVEGISWTAARWWGGGLNRARDDLWFAVGL 1672
+LG L++V +++GR H+ EW+ L G + +++D+D P GD V + L RLD FP+P RS + W V+E G D VS+ T EGW+C VEVHRFL+ P PT R + + +P AVL + DG ++ + G+ A RW GG ARDDL + +G
Sbjct: 52 VLGAVELDVVNLLTGRVNHMDEWLDLGDGGSIHVAVDFDMTMPLPQVGDGV--MPLPYRLDARLFPVP-------------------RSTTLW-----------------VDETGCDHVKVSWETTEGWKCVVEVHRFLLVPLPTEKGRIMANIEGAAQALYHSPIVNTVTDAVLAIPE-----DGVTRVGGMLWGGVVDYAGRWRQGGFAAARDDLAWGLGF 231 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig153.15.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig153.15.2 >prot_P-littoralis_Contig153.15.2 ID=prot_P-littoralis_Contig153.15.2|Name=mRNA_P-littoralis_Contig153.15.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=399bp MSTSKTTPDTINAGRSRGGDRLLGECSLNLVEVVSGRAPHVQEWVPLDSEback to top mRNA from alignment at P-littoralis_Contig153:51649..62614- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig153.15.2 ID=mRNA_P-littoralis_Contig153.15.2|Name=mRNA_P-littoralis_Contig153.15.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10966bp|location=Sequence derived from alignment at P-littoralis_Contig153:51649..62614- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig153:51649..62614- >mRNA_P-littoralis_Contig153.15.2 ID=mRNA_P-littoralis_Contig153.15.2|Name=mRNA_P-littoralis_Contig153.15.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1197bp|location=Sequence derived from alignment at P-littoralis_Contig153:51649..62614- (Pylaiella littoralis U1_48)back to top |