mRNA_P-littoralis_Contig1529.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1529.4.1 vs. uniprot
Match: A0A7S3HKC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKC7_9STRA) HSP 1 Score: 227 bits (579), Expect = 1.830e-66 Identity = 131/279 (46.95%), Postives = 168/279 (60.22%), Query Frame = 3
Query: 75 FSHEFREEDEQCKATYDPFNDNGTLVAHLPKLERGQHFPDLDLTTKLLQMNLKK*K----E*QCNSKH*VLDSNEFDMCGMEDDETENEITLPEALRSSG--EVRYGFNNQYTGIFRNLREELADMTEIQHPDSILSQFRSVLRISCENQLFDPERYLGDCQDGESDPIYQEAMSYLTFHTQQWDVWKARKAASKALTISDTKQSIDVSTPSTAAISATTTXXXXXXXXXXXXXXXXXXXXXXXXNTI---DPRDQAFESVGGFSDSEREILSSKLPNK 884
F+ +F+EEDE+CKATYDPF+DNGTL+A+LPKL G+HFPDLDLTT LLQ+N KK + NS VL S +F M +DE + +LP +SG V YGFNN Y+ +F +LR+E+ DMTEI+HPD I +RSVLR+S ENQ FDP RYLGD DGE DPIY EAM + F+++QWD WK+ K +S TP + T N DPRD AF++VGGFSD+E++ L++KLPNK
Sbjct: 51 FACQFKEEDEECKATYDPFSDNGTLIAYLPKLNHGEHFPDLDLTTSLLQLNKKKSAVAAGAEKVNSIE-VLSSEDFVM--ENNDEEDAASSLPSPFLASGLTAVTYGFNNMYSRVFTDLRDEMLDMTEIKHPDQIRPHYRSVLRVSAENQQFDPARYLGDQLDGEMDPIYAEAMPFRPFYSEQWDTWKSAKKVPAPEVLSP-------HTPEATSELNGTGEPEPESPATEGQETAPPGEVSILSNPSRNQDPRDVAFDAVGGFSDAEKDTLATKLPNK 319
BLAST of mRNA_P-littoralis_Contig1529.4.1 vs. uniprot
Match: A0A7S3HK63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK63_9STRA) HSP 1 Score: 165 bits (418), Expect = 4.650e-44 Identity = 92/160 (57.50%), Postives = 104/160 (65.00%), Query Frame = 2
Query: 1016 IARLSCTFSWLEDFTFMMNN--------------NVIKFNLRRCMIYPYLRVWKLARKVLADVAKILFLGKRAILKCLLHLYATFEHTDTHYLLNKIYITDYCVWIQQNNNSSSNSVGSNNTDTLQRFAKM----------------GLVGFYLPEIERW 1405
+ARLSCT SWLED++ M NVIKFNLRRC+I+PYLRVWKLARKVLADVAKILFLGKRA+LKCLL L+ TFEHTDTHYLLNK+YI DYCVW+Q N + S D LQ FAK+ L G YLPE+E W
Sbjct: 1 MARLSCTLSWLEDYSLMQPQWAAGDKAVLEERVGNVIKFNLRRCIIFPYLRVWKLARKVLADVAKILFLGKRAVLKCLLQLHNTFEHTDTHYLLNKVYIGDYCVWVQ-------NGLAS---DQLQAFAKLYNNAKGSIEKMPYTGKELTGLYLPEMEEW 150
BLAST of mRNA_P-littoralis_Contig1529.4.1 vs. uniprot
Match: UPI001425545F (protein SHQ1 homolog n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425545F) HSP 1 Score: 105 bits (263), Expect = 1.380e-20 Identity = 52/112 (46.43%), Postives = 73/112 (65.18%), Query Frame = 2
Query: 989 EGNVESAHTIARLSCTFSWLEDFTFMMNNNVIKFNLRRCMIYPYLRVWKLARKVLADVAKILFLGKRAILKCLLHLYATFEHTDTHYLLNKIYITDYCVWIQQNNNSSSNSV 1324
E VESA T+ +LS + SWL+ F+ + V++ N RR + YP R WKL+ KVL DV KI LG+R +LKCLL ++ H D Y+LN++YIT+YC+WIQ + NS+
Sbjct: 310 ENTVESAWTVCKLSSSLSWLDSFSSLQE--VLEANYRRSITYPLYRHWKLSNKVLIDVKKIFCLGRRRLLKCLLEIHRLLSHDDPRYILNELYITEYCLWIQSVSQRRLNSI 419
BLAST of mRNA_P-littoralis_Contig1529.4.1 vs. uniprot
Match: UPI001458A150 (protein SHQ1 homolog n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458A150) HSP 1 Score: 105 bits (261), Expect = 2.040e-20 Identity = 67/148 (45.27%), Postives = 89/148 (60.14%), Query Frame = 2
Query: 989 EGNVESAHTIARLSCTFSWLEDFTFMMNNNVIKFNLRRCMIYPYLRVWKLARKVLADVAKILFLGKRAILKCLLHLYATFEHTDTHYLLNKIYITDYCVWIQQNNNSSSNSVGSNNTDTLQRFA-KMGLVGFYLPEIERWAMEENDIS 1429
E NVESA TI LS SWL+ F + ++V+ ++RR + +P R W + KVL+D +IL LGK ILKCLL + + +Y+LN +YITDYCVWIQ S+S+ + TD L + K +VGF L EIE A EEND S
Sbjct: 282 EDNVESAWTICNLSSMLSWLDVFHSL--DDVVASSVRRSLCFPLYRQWAFSVKVLSDTGQILQLGKTYILKCLLEIRDVLNNRYPYYILNDLYITDYCVWIQ----SASDKRLVSLTDALSMISVKKDMVGFNLCEIEAEAAEENDCS 423
BLAST of mRNA_P-littoralis_Contig1529.4.1 vs. uniprot
Match: A0A835YXH0_9STRA (SHQ1 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXH0_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.730e-20 Identity = 68/187 (36.36%), Postives = 85/187 (45.45%), Query Frame = 3
Query: 93 EEDEQCKATYDPFNDNGTLVAHLPKLERGQHFPDLDLTTKLLQMNLKK*KE*QCNSKH*---------VLDSNEFDMCGMEDDETENEITLPEALRSS--------------GEVRYGFNNQYTGIFRNLREELADMTEIQHPDSILSQFRSVLRISCENQLFDPERYLGDCQDGESDPIYQEAMSY 584
E+DE+C+A YDP D GT+V HLPK GQHFPDLDLT+ LLQ KE + VL S+ DDE YGFN ++G FR LREEL +M ++ PD+ R R E+ FD RYLGD E D I+ EA++Y
Sbjct: 61 EDDERCRAVYDPAADGGTVVLHLPKATAGQHFPDLDLTSALLQPKWDPSKELADRAAERAAEGGTGIEVLASSTATDAPDSDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPSYGFNQAFSGFFRGLREELREMAQLPDPDATPEHERRAQREHAESLAFDEGRYLGDLLGAEEDVIFTEALAY 247
BLAST of mRNA_P-littoralis_Contig1529.4.1 vs. uniprot
Match: A0A7D9HXM6_PARCT (Protein SHQ1 homolog n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXM6_PARCT) HSP 1 Score: 101 bits (251), Expect = 4.970e-20 Identity = 65/159 (40.88%), Postives = 92/159 (57.86%), Query Frame = 2
Query: 989 EGNVESAHTIARLSCTFSWLEDFTFMMNNNVIKFNLRRCMIYPYLRVWKLARKVLADVAKILFLGKRAILKCLLHLYATFEHTDTHYLLNKIYITDYCVWIQQNNNSSSNSVGSNNTDTLQRFAKMGLVGFYLPEIERWAM-----EENDISESESDSS 1450
E VESA TI++LS T SW E FT + V+ +RR + YP R W+L+ KVL DV I LG+R ILKCLL + F ++ YLLN++YITDYC+W+Q+ S+ +T R +G+ L E+E A+ E++ ++SES SS
Sbjct: 14 ENTVESAWTISKLSSTLSWFERFTSL--EEVLDACVRRSLSYPLYRYWELSCKVLQDVKDIFKLGRRKILKCLLEILMLFNESEPRYLLNELYITDYCIWLQKVKERKIESLAKKLLETEIRKES---IGWDLKELETAAILVYNEEKDHTADSESSSS 167
BLAST of mRNA_P-littoralis_Contig1529.4.1 vs. uniprot
Match: A0A024GSK1_9STRA (CS domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GSK1_9STRA) HSP 1 Score: 104 bits (259), Expect = 7.180e-20 Identity = 64/173 (36.99%), Postives = 104/173 (60.12%), Query Frame = 2
Query: 944 IFSLRIAMTRE*L*SEGN--VESAHTIARLSCTFSWLEDFTFMMNNNVIKFNLRRCMIYPYLRVWKLARKVLADVAKILFLGKRAILKCLLHLYATFEHTDTHYLLNKIYITDYCVWIQQNNNSSSNSVGSNNTDTLQRFAKMGLVGFYLPEIERWAMEENDISESESDSSDE 1456
+ + A T + L +EG VE+A TI+ +S T SWL+ + + V++ ++RR + YP+LR ++LA +VL+ +L GKR +L LL +Y FE ++THYLLN I+I DYCVWIQ ++ + + +T++ F K G+ L E+E ++++D S SE + DE
Sbjct: 342 LVDILFAFTYDQLVNEGERTVETAWTISTISSTLSWLDSSPDL--HQVVRTSVRRAISYPFLRQYQLAERVLSATHTLLLCGKRIVLLALLQIYRAFETSETHYLLNSIFIQDYCVWIQSIHDDTLVQLAQRFQNTVRDFNKND-TGWDLTELELRVLKDSDASSSEESAEDE 511
BLAST of mRNA_P-littoralis_Contig1529.4.1 vs. uniprot
Match: UPI001ED88AE6 (protein SHQ1 homolog n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED88AE6) HSP 1 Score: 102 bits (255), Expect = 9.300e-20 Identity = 61/143 (42.66%), Postives = 89/143 (62.24%), Query Frame = 2
Query: 989 EGNVESAHTIARLSCTFSWLEDFTFMMNNNVIKFNLRRCMIYPYLRVWKLARKVLADVAKILFLGKRAILKCLLHLYATFEHTDTHYLLNKIYITDYCVWIQQNNNSSSNSVGSNNTDTLQRFA-KMGLVGFYLPEIERWAME 1414
EG VES T+ +LS SWL F+ + ++V+ LRR + YP R WKL+ KVL D IL LGK AILKCLL +++ F ++ Y+LN++YI DYC+WIQ+ + + NS+ + L +F+ K +G L E+E A+E
Sbjct: 291 EGTVESGWTMTKLSPMLSWLRTFSSL--DSVVISCLRRSLCYPLYRHWKLSCKVLNDTRCILHLGKAAILKCLLQIHSIFNGSEPRYVLNQLYIKDYCIWIQKASKNRINSLA----EALDKFSPKKKDLGLSLEELEHLAIE 427
BLAST of mRNA_P-littoralis_Contig1529.4.1 vs. uniprot
Match: A0A6J8EAA3_MYTCO (Protein SHQ1 homolog n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8EAA3_MYTCO) HSP 1 Score: 99.0 bits (245), Expect = 1.030e-19 Identity = 58/138 (42.03%), Postives = 82/138 (59.42%), Query Frame = 2
Query: 989 EGNVESAHTIARLSCTFSWLEDFTFMMNNNVIKFNLRRCMIYPYLRVWKLARKVLADVAKILFLGKRAILKCLLHLYATFEHTDTHYLLNKIYITDYCVWIQQNNNSSSNSVGSNNTDTLQRF-AKMGLVGFYLPEIE 1399
E NVES+ TI++LS T SWL+ FT + ++ RRC+ YP R W+ KV D +I G++ +LKCLL ++ F + HYLLN +YITDYCVWIQ ++ S+ T+ +++F K VG LP IE
Sbjct: 73 EHNVESSWTISKLSSTLSWLDTFTSV--EETLRACYRRCLCYPLYRNWEFTVKVHHDTVQIFNGGRQTLLKCLLDIHRCFSESYPHYLLNDLYITDYCVWIQSADSKQLQSL----TEAIKKFDLKKFDVGLNLPFIE 204
BLAST of mRNA_P-littoralis_Contig1529.4.1 vs. uniprot
Match: UPI000B45E680 (protein SHQ1 homolog n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45E680) HSP 1 Score: 102 bits (253), Expect = 2.250e-19 Identity = 62/146 (42.47%), Postives = 86/146 (58.90%), Query Frame = 2
Query: 989 EGNVESAHTIARLSCTFSWLEDFTFMMNNNVIKFNLRRCMIYPYLRVWKLARKVLADVAKILFLGKRAILKCLLHLYATFEHTDTHYLLNKIYITDYCVWIQQNNNSSSNSVGSNNTDTLQRFA-KMGLVGFYLPEIERWAMEEND 1423
+ NVESA T+ LS T SWL+ F + +V+ +LRR + YP R W + KVL D +IL LGK +LKCLL + H+ +Y+LN +YITDYCVWIQ ++S+ ++ T+ L + K VG L +E A EEND
Sbjct: 282 DDNVESAWTVCNLSATLSWLDVFHSL--EDVVVSSLRRSLCYPLYRQWAFSNKVLTDTCQILQLGKTGVLKCLLEMRDILAHSYPYYILNDLYITDYCVWIQ----TASDKRLASLTEALSMMSVKKDTVGLNLCTLEAEAGEEND 421 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1529.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1529.4.1 >prot_P-littoralis_Contig1529.4.1 ID=prot_P-littoralis_Contig1529.4.1|Name=mRNA_P-littoralis_Contig1529.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=225bp MCGMEDDETENEITLPEALRSSGEVRYGFNNQYTGIFRNLREELADMTEIback to top mRNA from alignment at P-littoralis_Contig1529:8085..9776+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1529.4.1 ID=mRNA_P-littoralis_Contig1529.4.1|Name=mRNA_P-littoralis_Contig1529.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1692bp|location=Sequence derived from alignment at P-littoralis_Contig1529:8085..9776+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1529:8085..9776+ >mRNA_P-littoralis_Contig1529.4.1 ID=mRNA_P-littoralis_Contig1529.4.1|Name=mRNA_P-littoralis_Contig1529.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=675bp|location=Sequence derived from alignment at P-littoralis_Contig1529:8085..9776+ (Pylaiella littoralis U1_48)back to top |