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Homology
BLAST of mRNA_P-littoralis_Contig152.100.1 vs. uniprot
Match: A0A6H5JIV0_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIV0_9PHAE) HSP 1 Score: 358 bits (918), Expect = 3.970e-112 Identity = 213/291 (73.20%), Postives = 229/291 (78.69%), Query Frame = 2
Query: 89 LTAVLAASKGPT-VSAFLPATAS---LARHISSSGSARDDALLTPSSNNNRPSSLGAVKARAEARGRTPRLASAREDCKSCMEAELLEEXXXXXXXXXXXXXXXXXXXRAALEEANLREKSRNAKIALGSFLSAVGLFFFQHSAIAPAEANPVVLLRAMETSSTPLATALTNGRPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGSSDKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGTVPKDVVVDDIRALLAGRPLPFKGFDMFEGEDHNIKGQIEIDG 949
L VL +GPT V +FLP A+ LAR SS+ A ++ S A GR RLA+AREDCKSCMEAELLE XXXXXXXXXXX R ALEE N REK+RN KIA GSFLSAVGLFF QH+AIAPA+ANPVVLLRAMET+S PLATALTNG+PTVVDFYADWCENCK MAPSMREIEEQFKNQINFVVVDGS++KNYDLVDAFRVDGIPHLAMVN GEVETAI+G VPKDVVVDDI+ALLAGRPLPFKGFDMFEGEDHNIKGQIEIDG
Sbjct: 7 LAVVLGLCRGPTAVVSFLPPPATALALARAKSSASEAAGPSIAASS---------------VAAGGRGSRLAAAREDCKSCMEAELLEXXXXXXXXXXXXEGAATR--RGALEEFNRREKARNTKIAFGSFLSAVGLFFCQHAAIAPAQANPVVLLRAMETTSAPLATALTNGKPTVVDFYADWCENCKAMAPSMREIEEQFKNQINFVVVDGSAEKNYDLVDAFRVDGIPHLAMVNGKGEVETAIVGAVPKDVVVDDIKALLAGRPLPFKGFDMFEGEDHNIKGQIEIDG 280
BLAST of mRNA_P-littoralis_Contig152.100.1 vs. uniprot
Match: A0A7S3XXL6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXL6_HETAK) HSP 1 Score: 179 bits (453), Expect = 4.000e-48 Identity = 87/159 (54.72%), Postives = 117/159 (73.58%), Query Frame = 2
Query: 449 KIALGSFLSAVGLFFFQHSAIAPAEANPVVLLRAMETSSTPLATALTNGRPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGSSDKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGTVPKDVVVDDIRALLAGRPLPFKGFDMFEGEDHNI 925
+ A S L+AVGLF +Q + P E P+ LLRAM S PLA L NG+PTVVDFYADWC NCK MAP+MR +E+++ ++NF+ VDG+ +N DLV FRVDGIPHLA++ AD EVETA+IG VPK ++ +++ ALLA +PLP+ G+D F G+ H++
Sbjct: 10 RAAAASALAAVGLFCYQRAH--PPE--PLQLLRAMARESPPLAVCLANGKPTVVDFYADWCSNCKAMAPTMRALEKEYAGRVNFLAVDGADPRNADLVGRFRVDGIPHLALITADHEVETALIGMVPKPILEEEMDALLAAKPLPWVGYDAFRGKSHSM 164
BLAST of mRNA_P-littoralis_Contig152.100.1 vs. uniprot
Match: I2CQS5_NANGC (Thioredoxin domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQS5_NANGC) HSP 1 Score: 173 bits (439), Expect = 1.320e-44 Identity = 89/177 (50.28%), Postives = 126/177 (71.19%), Query Frame = 2
Query: 404 AALEEANLREKSRNAKIALGSFLSAVGLFFFQHSAIAPAEANPVVLLRAMETSSTPLATALTNGRPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGS--SDKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGTVPKDVVVDDIRALLAGRPLPFKGFDMFEGEDHNIK 928
A L+E +EK A+ S LSAV +FF+QH+ P EA + LLR M+ S + T NGRPTVVDFYA+WCENCK MAP +R +E ++K+++NFVVV+G ++ + LV+ FRVDGIPHLA++ +GEV+TA+IG VP+ V+ DI +L++G+ LP++G+D FE EDH +K
Sbjct: 120 ARLQEELTKEKRNKVVTAVASVLSAVAVFFYQHTH--PVEA--ITLLRQMQAESPNIRTVSGNGRPTVVDFYAEWCENCKEMAPVLRAVEGKYKDKVNFVVVNGDDRNEASSVLVERFRVDGIPHLALMTKEGEVKTALIGKVPRKVLEADIDSLISGQVLPYEGYDAFEDEDHFVK 292
BLAST of mRNA_P-littoralis_Contig152.100.1 vs. uniprot
Match: A0A0G4EGV6_VITBC (Thioredoxin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EGV6_VITBC) HSP 1 Score: 168 bits (425), Expect = 7.120e-44 Identity = 90/173 (52.02%), Postives = 121/173 (69.94%), Query Frame = 2
Query: 404 AALEEANLREKSRNAKIALGSFLSAVGLFFFQHSAIAPAEANPVVLLRAMETSSTPL-ATALTNGRPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGS-SDKNYD-LVDAFRVDGIPHLAMVNADGEVETAIIGTVPKDVVVDDIRALLAGRPLPFKGFDMFEGE 913
AA+E N+ E+ N ++ALGS L G + + P A+P+V+LR ME S P+ A TNGRPTV+DFYA WCENCK MAPSMR IE+++ ++NFV VDGS SD + LV FRVD IPH+A+V+A GE+ TA+IG +PK+V+ D ALL+ RPLP+ G+D F+G+
Sbjct: 24 AAVEALNV-ERRENMRVALGSGLG--GALLYGGQRLNPLRADPLVILREMERDSPPVDAQLFTNGRPTVIDFYAPWCENCKTMAPSMRTIEKEYSGRVNFVTVDGSRSDTSSQRLVQRFRVDAIPHIALVSARGEILTALIGLIPKEVLKADFDALLSDRPLPYIGYDAFDGD 193
BLAST of mRNA_P-littoralis_Contig152.100.1 vs. uniprot
Match: A0A7S2V5P4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P4_9STRA) HSP 1 Score: 165 bits (418), Expect = 4.040e-43 Identity = 83/166 (50.00%), Postives = 114/166 (68.67%), Query Frame = 2
Query: 428 REKSRNAKIALGSFLSAVGLFFFQHSAIAPAEANPVVLLRAMETSSTPLATALTNGRPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGSSDKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGTVPKDVVVDDIRALLAGRPLPFKGFDMFEGEDHNI 925
+E+ N IA S L+AV LF Q P ++ + LLRAME STPL TNG+PTVVDFYADWC CK MAPSMR +E++F ++NFV V+G+ KN DLV F+VDGIPH+A ++ +G VETA +G VPKDV+ +++ AL + LP++G+D F+G ++
Sbjct: 24 KERKNNLLIACSSVLAAVCLFATQR--FFPPDS--LSLLRAMEAESTPLIAVQTNGKPTVVDFYADWCGYCKTMAPSMRTVEKEFAGRVNFVTVNGADPKNADLVYKFKVDGIPHIAFMDGEGYVETAFVGLVPKDVLEEEVDALAKHKALPYEGYDAFQGRPRSV 185
BLAST of mRNA_P-littoralis_Contig152.100.1 vs. uniprot
Match: A0A7S2MHY4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHY4_9STRA) HSP 1 Score: 164 bits (415), Expect = 6.170e-42 Identity = 85/173 (49.13%), Postives = 114/173 (65.90%), Query Frame = 2
Query: 407 ALEEANLREKSRNAKIALGSFLSAVGLFFFQHSAIAPAEANPVVLLRAMETSSTPLATALTNGRPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGSSDKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGTVPKDVVVDDIRALLAGRPLPFKGFDMFEGEDHNI 925
A EA ++ RN IA+GS G F + S P +A V +L+ + ++S PLA L NG+PTVVDFYADWC NC MAP M+ +E +FK ++NFV +DG + N +D F+VDGIPHLA V ADGEV+TA+IG VPKDV+ D++ALL + LP+ G+D F G N+
Sbjct: 75 AFAEAYESKRRRNMLIAVGSAAIGAGAFGWDRSK--PVQA--VGILKELASASPPLAEVLRNGKPTVVDFYADWCTNCLEMAPRMQLLERKFKGKVNFVAIDGDNRANERWIDDFKVDGIPHLAFVGADGEVQTALIGLVPKDVLEADMKALLEQKELPYLGYDAFRGRSRNV 243
BLAST of mRNA_P-littoralis_Contig152.100.1 vs. uniprot
Match: A0A7S2ST54_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST54_9STRA) HSP 1 Score: 163 bits (412), Expect = 8.340e-41 Identity = 77/168 (45.83%), Postives = 111/168 (66.07%), Query Frame = 2
Query: 434 KSRNAKIALGSFLSAVGLFFFQHSAIAPAEANPVVLLRAMETSSTPLATALTNGRPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGSSDKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGTVPKDVVVDDIRALLAGRPLPFKGFDMFEGEDHNIKGQI 937
K RN A+GS L+ VG F+ + S + V +L AME +S PLA L NG+PT++DFYADWCENCK MAP M ++E ++ ++NFV ++G S N D VD FRVDGIPH A V+ G+++T++IG +P D++ + ALL PLP++G+D F G+ ++ I
Sbjct: 103 KRRNLFTAIGSALTGVGAFWRKRSQ----PTDSVAILHAMERNSPPLAQCLENGKPTIIDFYADWCENCKAMAPRMAQLESRYGTRVNFVTINGDSRANDDWVDLFRVDGIPHYAFVDQGGDIQTSLIGLIPADIMEKQLAALLRQEPLPYQGYDPFVGKPRHVMDYI 266
BLAST of mRNA_P-littoralis_Contig152.100.1 vs. uniprot
Match: A0A0G4GQ67_9ALVE (Thioredoxin domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GQ67_9ALVE) HSP 1 Score: 146 bits (369), Expect = 2.680e-35 Identity = 76/172 (44.19%), Postives = 115/172 (66.86%), Query Frame = 2
Query: 419 ANLREKSRNAKIALGSFLSAVGLFFFQHSAIAPAEANPVVLLRAMETSSTPLATAL-TNGRPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGSSDKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGTVPKDVVVDDIRALLAGRPLPFKGFDMFE--GEDHNI 925
A+ E + N +A+ S L +FFQ P+E +P+V+L+ +E +S + T L +NG+PTV++FYA WCENCKVMAP M +E+ ++ +INFV VDG +N DLV + RVD IPHLAMV+ G+ +TA+ G +P+ V+ D AL+ G LP+ G+D+F+ G+ H++
Sbjct: 74 ASSEETAGNKAVAIVSALFGFVFYFFQLVRGVPSE-DPLVILKRLEMNSPVVDTRLVSNGKPTVMEFYAPWCENCKVMAPLMASVEKSYEGRINFVTVDGGKPENADLVRSLRVDAIPHLAMVDRSGKFQTALTGLIPEKVLRFDFDALIKGDDLPYVGYDVFDQDGDSHSM 244
BLAST of mRNA_P-littoralis_Contig152.100.1 vs. uniprot
Match: A0A5J4YW86_PORPP (Thiol:disulfide interchange protein TxlA-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW86_PORPP) HSP 1 Score: 141 bits (356), Expect = 1.230e-34 Identity = 71/181 (39.23%), Postives = 108/181 (59.67%), Query Frame = 2
Query: 401 RAALEEANLREKSRNAKIALGSFLSA---VGLFFFQHSAIAPAEANPVVLLRAMETSSTPLATALTNGRPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGSSDKNYDLVDAFRVDGIPHLAMVNADGEV-ETAIIGTVPKDVVVDDIRALLAGRPLPFKGFDMFEGEDHNIKG 931
RAA +++ ++ G LSA VGL F H + ++ +P V++ +E + P+ AL+NG+PTV++FYADWC +CKVMAP + ++ F +NFVVV+G + +N DLV FRVDGIPH++ + + +T IG VP DV+ I AL A PLP++G +++ E G
Sbjct: 19 RAAFAAKVKASEAKEQRMQRGKILSALISVGLGFVIHFVLTHSQLSPTVIMHELEKKNPPIEVALSNGKPTVIEFYADWCTDCKVMAPKLSKLHATFSPTVNFVVVNGDAPENQDLVSQFRVDGIPHISFIYGGKRIPDTTFIGLVPADVMTQQIDALRARAPLPYQGLELYSDEFEEAYG 199
BLAST of mRNA_P-littoralis_Contig152.100.1 vs. uniprot
Match: A0A7S1CTK7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CTK7_9STRA) HSP 1 Score: 137 bits (345), Expect = 3.480e-33 Identity = 77/188 (40.96%), Postives = 114/188 (60.64%), Query Frame = 2
Query: 428 REKSRNAKIALGSFLSAVGLFFFQHSAIAPAEANPVV---LLRAMETSSTPLATALTNGRPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGSSDKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGTVPKDVVVDDIRALLAGRP-----------LPFKGFDMF-EGEDHNIKGQIEID 946
+ K RN IA+ SF A+ F +Q A+PV +L +ME S PL + NG+PTV+DF+A WC NCKV AP+++ +EEQ+ + +NF++V+G KN+ L+ F VD IPHLA+++ +G+VETA+IG + ++V+ DI ALL R LP+K +D F + E NI Q +D
Sbjct: 6 KNKLRNVIIAVSSFAFAIANFVWQL-------AHPVTAVSILVSMENKSAPLTSIGNNGKPTVIDFWAPWCSNCKVAAPTLQAVEEQYGDSVNFIMVNGDDGKNWPLIQLFGVDAIPHLALLSDEGDVETALIGPMSRNVLRADIDALLTKRENCEAAPVCHEELPYKMYDAFSKRESRNINFQRAMD 186
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LIE0 |
| PFAMs | Thioredoxin |
| Model size | 3183 |
| Max annot lvl | 2759|Eukaryota |
| Hectar predicted targeting category | chloroplast |
| GOs | GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009636,GO:0009987,GO:0010190,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0017004,GO:0019725,GO:0022607,GO:0031976,GO:0031977,GO:0031984,GO:0033554,GO:0034357,GO:0034599,GO:0034622,GO:0042221,GO:0042592,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055035,GO:0055114,GO:0065003,GO:0065007,GO:0065008,GO:0070887,GO:0071840,GO:0097237,GO:0098754,GO:0098869,GO:1990748 |
| Exons | 6 |
| Evalue | 1.55e-119 |
| EggNOG OGs | COG0526@1|root,KOG0907@2759|Eukaryota |
| Ec32 ortholog description | thioredoxin-like protein |
| Ec32 ortholog | Ec-18_004020.1 |
| Description | cell redox homeostasis |
| Cds size | 891 |
| COG category | CO |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789729.4398174-UTR-P-littoralis_Contig152:444018..444079 | 1680789729.4398174-UTR-P-littoralis_Contig152:444018..444079 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig152 444019..444079 + |
| 1680789729.5213635-UTR-P-littoralis_Contig152:452563..454794 | 1680789729.5213635-UTR-P-littoralis_Contig152:452563..454794 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig152 452564..454794 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789729.450544-CDS-P-littoralis_Contig152:444079..444436 | 1680789729.450544-CDS-P-littoralis_Contig152:444079..444436 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig152 444080..444436 + |
| 1680789729.4640129-CDS-P-littoralis_Contig152:445919..446024 | 1680789729.4640129-CDS-P-littoralis_Contig152:445919..446024 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig152 445920..446024 + |
| 1680789729.4791973-CDS-P-littoralis_Contig152:447834..447938 | 1680789729.4791973-CDS-P-littoralis_Contig152:447834..447938 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig152 447835..447938 + |
| 1680789729.4888415-CDS-P-littoralis_Contig152:448379..448491 | 1680789729.4888415-CDS-P-littoralis_Contig152:448379..448491 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig152 448380..448491 + |
| 1680789729.5026052-CDS-P-littoralis_Contig152:451538..451634 | 1680789729.5026052-CDS-P-littoralis_Contig152:451538..451634 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig152 451539..451634 + |
| 1680789729.5111945-CDS-P-littoralis_Contig152:452446..452563 | 1680789729.5111945-CDS-P-littoralis_Contig152:452446..452563 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig152 452447..452563 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig152.100.1 >prot_P-littoralis_Contig152.100.1 ID=prot_P-littoralis_Contig152.100.1|Name=mRNA_P-littoralis_Contig152.100.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=297bp
MKAFCFHVLLTAVLAASKGPTVSAFLPATASLARHISSSGSARDDALLTP SSNNNRPSSLGAVKARAEARGRTPRLASAREDCKSCMEAELLEEERKRAA SGQGGGGNGAATRRAALEEANLREKSRNAKIALGSFLSAVGLFFFQHSAI APAEANPVVLLRAMETSSTPLATALTNGRPTVVDFYADWCENCKVMAPSM REIEEQFKNQINFVVVDGSSDKNYDLVDAFRVDGIPHLAMVNADGEVETA IIGTVPKDVVVDDIRALLAGRPLPFKGFDMFEGEDHNIKGQIEIDG* back to topmRNA from alignment at P-littoralis_Contig152:444019..454794+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig152.100.1 ID=mRNA_P-littoralis_Contig152.100.1|Name=mRNA_P-littoralis_Contig152.100.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10776bp|location=Sequence derived from alignment at P-littoralis_Contig152:444019..454794+ (Pylaiella littoralis U1_48) GACGAAAAACAGAGGCAAGGTCTCGTGTCATCAAATATACTTGGTGCGTG
AACCTCGCCAGATGAAGGCATTCTGTTTCCATGTCTTGTTGACTGCAGTC
TTGGCTGCAAGCAAGGGCCCCACAGTGTCAGCGTTTCTGCCCGCCACTGC
CTCACTTGCTCGACACATCAGCAGTAGCGGCAGTGCTCGCGATGATGCTC
TCCTGACGCCCTCCAGCAACAACAACCGACCGTCGTCATTGGGTGCAGTG
AAAGCACGAGCAGAAGCTCGCGGGAGGACGCCCCGCTTGGCTTCCGCCCG
CGAGGACTGCAAGAGCTGTATGGAAGCGGAGCTGTTGGAGGAGGAGAGGA
AGAGAGCCGCGTCGGGACAGGGGGGTGGAGGGAATGGTGCCGCCACCAGG
AGGGCGGCTTTGGAGGAGGTGCGATTAGGTCTTGGCGTTTAACGAAAGGT
CTTCGATTGGTCCGACGACAAGGACGGGCGTCGGTGTCGGTGACTCACAA
GAACCGAGCCTCCCCTTGCTGGTTTCCGTCCATGCCATGATAGCCACGAA
AAATGTGATTTTCTTTTGTAAATGCTGCTGCTGCTGCTGCTGCCGCTGCT
GCCGTCCGGCGGCGGCGGCCGTGGCTGCTGCAGGTAAACTTTAAACCAGT
CTTTCAACACTCACAAAATGCGGTGTAACGCTCCGACTTGAATATTAAAC
CTTCGAGCGGGAAGTTCGCCACGTACAGCAGGGACGTTAGCGACCACGTT
GCCATGCATGTGTGTTGTCGGCATGTGCTCCCAATTTTGTGTAATATCGG
AACGTTGTCTGGGGCTCAATCCCTGCATTGAAATAACAGGGCAACGGTTC
CTGCGAATCTTCCCGTGCCCGTACTGGGTACAGCGGAAGCAGTACGGTCC
TGAGAAAGTGTTTACTTGTAAACGGAGCGGTTCGAGGTTCGAAGCATTCT
GTGTCTGCGAGCCTCACGGTCAATCAACACACCAGTTTGCGTTATGTACA
AGCTGAAGTGCTTGCACATGTTATCTTTTATGTGCATCACCTGACACGCA
TTTTCCTACCCCAGACGAATGACAAACAGTGGATGTCAGACATGAATATC
TAACACAGCAGTTGACATACCCGTATATAAATGTCTAACCCATCCATTAG
TTTAAAAAAAAAAAATTACAACCACATCAATATGTTCGCCTCTCTCCAGA
CGGGGTCTGGGTAGATATTTATTGCAACGAACACAAAGAATAAGATACAT
CTACCAAGTGTTTCTGTAACTCATCAGATAATGTACCGTTGCAGCTCCCC
TGAGGGTATTAGACTCAACAAGACAATTTAGTGGTCGCTTGTGTGACATA
CGTCACATGCGTTGAGTGTTCACAGTTTATATTTGTGCTGTAGCGTGGAG
TAAAATGCTGTACAGCACACACCACCGACTGGTTGCTTGTGTCGGGGGTA
TGATATGATACGATAACCTGTCCGTACGATCGCAACCTCTGGCCTTGTAT
CGCTATACTTGACCCCAATCTTTATCGTTCGTGCATACGGCGTTGGAGGA
CGGCGGTGGTGTTCATCTCCCAACCATACTGCCGCGGAAGTTGTTGGTCC
ACGGCAGGCAATCGTTCGCCCCTCTCGAGAACTTCACGCCGCGTATCACA
TAACCTCTTACCGCCAAGTCACGTTGCGTAATGCCCCCCCCCCCCCCTCC
CCCAACCACACATACTGATGTATGTGTCATAATCCGAGTATTCCTGCAGG
CGCATTTCGCTCTCATTTTTTGGCTGTCTCCCGGGTCCCGGTCTCTTGTC
CCCTGTTAGTTTCCGCCCTCGCCTGTCTTCGTGTACGCACTTCTATTTTT
TTCACGAATTTTGTTCCTGCTCCCTCTTGCTGCGGGTCGAATTCTTGACA
GGCCAACCTGCGGGAGAAGTCTCGCAACGCAAAGATCGCCTTGGGATCTT
TCTTGTCGGCGGTCGGGCTGTTCTTCTTCCAGCACTCCGCCATCGCCCCC
GCGGAGGTATGGTATGAAATGTGGTTCTGATTGATGTACATGGACTGCAT
CACTGCAGAAGCTGTTTCATGTCTTGTTGTCCTGCGCGCGCGCGCACGCG
ATGGGACGCACCGCAAGCTGTCCACGCGTAATACAGCAGCGCCTTGCGTG
TGGGGCTAGAGCCGACTGAGGAGCGGCGAGGTGCTGCTTCCGCCTGCTCT
GTATGCACGGCGGTGCTGTAGCAGTTGGTGGCAGATACTGATGGCGCTCT
TTGCATAACTTTTTTTTTCAGGTACATGCATGATCGCTTCACTCTGATCG
GACGAGGTTTCCACTACACTTCGTATTTTGCAGTGTCCGTAACGAGTGGT
ACTGACCTGTCACATAATATGCTGTGGTTGCATCTCCCCGGCAGTAGCAG
CATTTCGTCGGTATCAGGCTCAACACGGCTAGTTGATGGCCGTCTTGTGT
GTCTCACCCTAATATAATCGTGGTTGAGTTGCACGGTCTGTGTGTGAATT
CTCGCAAATGGTATGCGTGTCTCCCGGGGGCGAATCAAGACGACGTGATG
GAAGTCATGCACTACTACTGCTGCTGTTGTTCGTTACCGTACAAAACATC
GCATGTATTTTCTGCTGTTGGAGGTGGATACGGATGATAGACCAATCAGT
GTATCGTATATGGTATGGATTGTGATCCGATGTCCGATGTTGTACAACTC
AATTGTTCGGCGGCGCAATCTCGACGAGAAGGTGGCCTAATTGCGAATCT
CACAAAAAAAATATCTGAAATTCGAATTCCCAATTTGAAATTCTCAAATT
TGATTATTTCCATTTCTCACATTTTGTTGATGTGAAGACAACACACATAC
TTTGTATAGTACTATGAGACTGCTGGATTGTATGTACCGCTGCTGTAGAA
TTTATCTGCATCACAAACGTTTACATTGTAGTTTCCCTCATGTTTGTGCC
GAGGCGTTGTGAGGTGGTCGCATGTAAGTGAGCAGGTCTGTTTCATTTGA
GGTGTTCGTCTTGAAACGTTCATGAGTGCGCTGCTTGCTTCTGTGAGATT
TGAAAAGAGCATGTGGTGATGTGGAGGCGGTTGAATGCTGACGCACACGA
GGAGAGCGGGCCGCGGGCCATTTGTTGTGTGGGTTTTGACTTGCTTCGGC
GGGATTTCTCTGCCCGGAGCGATCCCGCGAAATAGAGCCAATCCCGGCGA
CTTTGGGCGTCGAGAACACGGGCCACCGATGCCGGGCGACCCCCGGACCT
GCACGGTAATGTACCGACGGGTCTCCTGCGTGCCTCCAGAAAAAATCATG
AACAAAGAATCGCTGCCGGCGGAGAAATCTATGCCCAAGCATGAAAAATG
ATGAAATGATACATACACATATACGACTAAGATCACGAACCCACAGCATG
TGAGATACAGATCCTTCCGTCCTGTGGTATCGATGCGGTCGTTGACGTGC
ACCATCACCCGAAACGTTCGATCAGAATTTTCTGACGTTGGATCTGTCGA
ACAACTCATTTGTGCTGAGACATGTGCACTGGACAAAGGCCTCGTCCCCT
CTTGGTCGAAGGACGCACTTGGCATCACAACACCGTGAAGAGAGGATAAG
CCGGACGCTTTATTTTCCGTGTGTGATCCCGTCCAACGGTTGCAGTTGGC
TCCTCCCACGCTCTTTTACCGCTGCTGCTGTAGCTGTAACCTTGCGGCCA
CGCGTTCTCGTTGTGGTGACACCTGACTTGTCCTGCCGTGGTTTCCTGCA
GATTCTCAAAGTACTGCGGTCCTCAAAAACAAAAGTACACGTGTATTGCC
TGCATCGTTGCCACAGGCAAATCCGGTTGTGCTTCTGCGAGCGATGGAGA
CCAGCTCAACCCCCCTCGCGACGGCCCTGACGAACGGAAGACCCACCGTG
GTGGACTTCTACGCGGACTGGTGAGACTCCCGCTTTTGCCCTTCCGGCAT
TGAGTCGGTCCGCTGCCAGCGTCTCTTGGGATCGTGTGGTGGAGGACGAA
GAGTGCACTCGTGTCTTTGGCACAGCATTGGGGTAGGCTGTGCACCGAGC
TCCCTGCGGAGATTCAGATTAACACGCGCGTGCGGAATGCCTCACGCATG
CCCCGCGCTTGCGCGACGCGACGCAGTTGTTTGTGTATATCATACTGCCG
AAAACTCGCGCTTTGCACTAATGGGGGGCGGTGTTCCCAACCGCCATCCT
GCAGCACCGCCGTCGAATTATCGCGAAATTGTCACACAGCTAAGGTTTAC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCACGCCAACTACCTTGAGCCT
TTTTACTCACGAGTCCAGGTTCTGTGTTGTGCCGCAAACATCTTCGTGGC
TTGATATTTAGGTGCGAGAACTGCAAGGTGATGGCTCCCAGCATGAGGGA
GATCGAGGAGCAGTTCAAGAACCAGATAAATTTTGTTGTCGTGGACGGCA
GCTCCGACAAGAACTACGACTTGGTGAGTTTTTGTTTTCAACACAAATAC
ATCCTCCATACGGTCGACATATCGTCGCCCGACGAAATGAGCAGCGCGCT
CCCCCCGTCGGTCACATTTTGCCGCTCCTGCCGACAAGCACGAACCGAGA
GCATCTCGAACGATATTGTGGTGTATCTGGTGTTCGTGGACACACATGCA
CCTTCCTGGAAATGAGGACGATCTCTTGCACGTAGTCGAAGCTCTCTAAG
AAAGGGCGGGCTCTTGCCATATTGGCTGCAAGAAACGCCAGTTTTTTCCT
GTCGTCGTAGGCGGTCGGCAACGCGTCTCTCTCGCTCTCTCTCTCTCTCT
GCGGCAGTCGCGAACACGACTTAGGATAATTTCTGTTCCTGGTTTATTTG
ACCGAAAGAGTGGCCTACAATCATCCCTGCACTTAGACGTGTTTGCCCCG
CGTGGTCCGTGGGAAGTACGCTGCGTGTATCAGTCGACGCGGGTCGCTTT
CTGCCGCGTCTGCATACATGGGACTCGGAATTTCACCGGTTCCTTTAGCT
TTTTGGGTAAACGACACAACAGGGTGCACCCTGGTCATTCTGCGACTCAG
CAGGGTGTATACTTTTTTCTTGCGTGAAACGAACCAAGCTGATTGATTAA
ACCTTGAGATCACCCTGTTGAGACGGAAAAGCGCCCGGGCGCATCCCGCG
AAGGCTACTTTTATTCACAACTACACCCTGATTTTTGAAAAGCACCCTGT
TGTGTCGGTAAACGAGACCCCTCCACTGGATATTCCTCCCGCAGGAATCA
CTTTCCGTACCCGCCAAAGGGCATCAAATATGAGATCTTCCACCGCCAAA
GGTACAGTGGTGAACACCATGACCGGCACGACGGACCTACCGCATGCCCC
TCCACATCAACTCTTCAGGTTATCAACATACAATGACACACTGCTGTGCC
AACAGATCAGAGCTCCGTTGCGAGCAAAAAAACAGCAGATTCACCGAGGA
AACAGAGACACCAGCCCGAAACAGAACACATTTGTTGGCCCGCTGCAAGC
ACTCGTAGATCACACAAGAAGAACGCAGAAGAACGACAAAGTAGCGGCAC
AAGTGCCAGACAAGTCAGTACAACAGACGGACACGTGTAACGACAGGACA
CGCGACTCACGGCATTGTAGACACAAGTAGATGTCGGAACCAGAGAGCAA
ACAGTGCTGGAATGAGGAGGCACACACAACTAACAGGAGGCATAAAAATC
GACTGCTGCGAGAGGGAGACCCATCCAATATCGATGCACTGAGCAGAGAG
GGAACCACACACCCACCTTTGGCCCACGTTGTCCCTTTACTTAATACAAG
GACACACAAAAGGCACAACACCACCTTCTGTTCTTCTTGTGTGATCTACG
AGTGCTTGCAGCAGGGTCAACAATTGTGTTCTGTTTCGGGCTGGTGTCTC
TGTTTCCTGTCGGTGGATCTGCTGTTTTTTTGCTGGCAATGGCGCTCTGA
TCTGTTGGCACAGCAGTGTGCCATTGTATGTTGAGAGCCTGAAGAGTTGA
TGTGGAGGGGCATGCGGTAGGCCCGTCGTGCCGGTCATGGTGTTCACCAT
TGTACCTTTGGCGGTGGAAGATCTCATACTTCCTCTGTATCATAAGTCTG
TGCCGTTATGTTCTTACGCCCCCTCAACGGTGTCCGATGTCTTCGGCGAT
AATTTTTTCGAAATCTTCGGAGTTTTTTGGGTTGAAACACACACATATTT
TTTTTTGCGCACTACCCTGCGCATGGGCTAGCGGCTAACAAAAAAGTAGT
CAGGCCAAAAATGGCCGTATTTAACCCTTTCCAGAGGTGGAGTGGGGGGC
GGGGGCAAAAAAAAAAACAATGCAATCCCCCCCAAAATTATCCCTAACCC
TGAACCTAGCCCCCCTACCTCAAAGATTCATGTCGAGTCCCTCCTTACTA
AAATCAGTATAATAGTGACGCGACGCTAAAACCAAGACACTTGGGTTTGC
CACACTAAAACGAAGATACTTGGGACTCATGCTCTAGAACCAAGACATCT
GGCGGAATCAAAATTCTTTAAATGGGCCAAAATGGGCATATTTTGACTTC
ATTTTAGTATGAACAACTGGCTTTTTTTTTTGCTTTTTTTTTTGCATCAG
CTTCTTTGAGACTTCATCTTTCGAACGAACCTAACTATAGGATGATCGAA
ACAGTATGGATGCGCAAACAATTACACGCACCTTACAGCCCAGACTTATG
ATACAGAAGAAGTATTTGATACCCTTTGGCCGGTGCGGAAAGTGATTCCT
GCGGGAGAAATATCCGGTGGAGGGGTCTCATTTACCGACACAACAGGGTG
CTTTTCAAAAATCAGGGTGCAGTTCTGAAGAAAAGTAGCCTTCGCGGGGT
GCACCCGGGCATTTTTCCGCCCCAACAGGGTGATTTCGAGGTTTGACCAA
TCAGCTTGGTTCGTTTCACGCAAGGAAAAAGTGTACACCCTGCTGAGTCG
CAGAATGAGCAGGGTGCACCCTGTTGGGTCGTTTCCCCTTGTTTTTTACA
CCGAGGGATGGCCTCTGCTGAGCCCCCCTCCTGGTAGATTTGTACTGAAG
CGCGTTCTGCTCCGCCCTTTCCGTAGGAAAACCCTCTGCTTTATGATATG
ACCTTCGTCGCCCTTTTGGTCATCGATGCCTCCTCTGGCGTATATACCTA
GCTGTGACACCTTCGGCAAACTATGTGATGTGGTTTCTGGGCGGTGTGAA
ATTGTGATATGATAGCTCACGGCTTCAAGTAGGCTCGCGGCTTCCTGGTG
CTACTTTTCCTCCCGTAAGATGTTCGGATATTCGCTGTGCTTCAAGCCAC
GGCAGTGAACCAGGTATCACGCCACGAGCGCTCTTTCACGCGACGTATGC
ACCCCACCCTCACCCTCGGACGTGTTTGTTCGGCCGCATCCAAAAATGCC
CTCCTCGTGTTTCGGGGTACACTAGGCACTCGCTGCAAAAATTGCTCAAG
TTCATTTTCGACTTTTCGACGTTAGTTTACCGTTGACGTCTGTTGTGACC
ACCTCTTGACGCACGGGCAGGTGGACGCCTTCCGGGTGGACGGTATCCCT
CACTTGGCGATGGTCAACGCGGACGGCGAGGTGGAGACTGCAATTATTGG
AACGGTGCCTAAGGATGTGAGTTCTTTTTTTTTTAGCGGACGGTGAGGAT
GGTTACCAAACGTGTGGACGAGTTTTATGTGTAAGGGTTTTCAGGGGGTA
CCAAAGGATAATACGGGACCCCCTGAAGAGGTCATGAAAGCTCCATTACT
CCACGGCAACAAGAAAACAGGGTTGGTGCGGAAAGGGTGACTCCATCGAG
CGGCGTTGGATTCATCATCGTAGAAATCTCTCCGACAACGTTGCTTCATG
TCGGCACCGTCGTCGTCGTGGAGTGGTCGGGCTTTGAAACTTGAACCGGG
GGGTCCCGTGGCATATTCTGCTACCTACGATATGCGCCTTCCTCGCTGAC
TTGGGGGGGGTATAGCTGCTTTACCCTACCGGATGAAGGCCGTCTTCGTT
AAACGTGCACCCGCGGCGCTTGCTTATCCCGACGGTCACACTTAACCCGA
CGGACACGCCCATCCCGACGGTTACAATTATCCCGACGGACACGCCCATC
CCGACGGTTTCACTTATCCCGACGGTTACACGAATCCCAACCGTCACACT
CCCAAGAGATATGCATAATTGCCGACGGTGTTTGCCGTGTGAAACTCTTT
GCTGCGCAAAAACAAGTTTTTCGTACTTGTGTACGTCACGTGGATTGCAA
GAGCTGACACCGAAGCTACATTCTGGCTGCTGAACAGAAGGGTTAGCGCG
GTAGGTTACACGAACGGCTTTACGACTACGTGCGTGCATCCCGTGGGCTT
CATGCGGCAGACTGATGCCCACTCCCGTATCTGGTACATCCGCGCGTACT
AAACCCGGCCAAATATTTCCCACCGCAGGTGGTGGTTGACGACATCAGGG
CTTTGTTGGCCGGCCGGCCTCTACCGTTCAAGGGTTTCGACATGTTCGAA
GGCGAAGATCACAACATCAAGGGGCAGATCGAGATCGATGGGTAACCAAT
TCCGTCCCCCAGACGCACTCTTGCGGCCTTCCGTCCCATTTTTTGTGAGG
GGGGTCCAACCGCTTTTTCATTGACAGCTGTCGTCTGGGCGGAAGGGGAT
GGGGGCACGCCGGACTCCTTTTTTATCCTCGGTGCTTGTTGCGAGAAGGG
TTTTTGGTGTGTGTTCACCCCGGTATGATCGTGTTACGCCAGAGCCGTTG
GGGTTCAGGCCACCTCGGATCGGCCCTTGGTACACGAGGAGGCACTGGAC
GCATGACGTTTGAAGAGGAGACGCGGCTACGTATCCATAGCGGGGGTTTA
CGGCGTTCGTGCCCTAGTTCTCGCGGAAAGGACATCTGGTGTTTATGGCA
GGTTCGACGGTCCTTGAAAAAGGTCAAAGCAGCGTGCGGTACTGACTCTT
GCGTCGCAATGCACTGTATTACGGTCCCGGTTGGATGAACTGTTGTTACC
AGGCAGACGTATTTTTTCTCTCGAGTATTTTAGCGATACGCTTCTGTTCG
CCTCGTGGGAGACGTCGGGTTTGCCCTTATCAGATCATTTGTCTTATTCG
ATCTCTTGGACGCAGCCGACTTTGTGGGTCAGGCGTGGTCGTTGAAACCT
TACGGGGGGGAGGCGGGGGGGGGGAAATTGATTGACCAACTCTATCCCCT
AGCTGTGCCTAGTATGTCCGTGCGTTGAACGTTTCGTAGGAGTTTCTTTT
CGGTTTTGTGAAATCAGCCTGTTGGTAGTCACCGTGTGTTGCGATTAGCC
TCCCCCCCCCACGCCTGCCCGCCCCCCTTCTCGTTCATGTGACTCTTAGA
GCCGTGACCCCTCGCTCGCTTCAGCTTCGCCGCTCTTGTTGTAAATAATA
CTTGCAAACCCTTTTTTTTTGGAGGATTTTTGGTGCTGTCACAAGTCGCT
GGTGGTGCTGTCAAGCGGGGCATGGCTTGCGCCTTGACAGTTTTCGTATT
ATATTATGGGCATACAGAGCGAGTCGTTCCGGTATGTCACCGCGGATGAA
TACAGAGAGTATCCTGCGGTGGGCACTACAACGGTGATAGTGCAACTGCT
TCCCGTAGTGAACGGACTGGCCGAAGGACGGCAGACACCCGGTTTGATTT
GACCTTGGACGTCCGAAAATATTAGTGTTTTTTTGGGTGTTGCTTCCTGT
TGGCGCAGTCGGGATGGAACGTAGCCTCGATGTGCGTGCCACTATTATGG
ACTCCGTCAGTGGGAATCCTTGCGGTGGTGTCTTGACGTCCCTCAAACCA
GACAAAGTGTGAAGAGTTTTGTTGGAGCAGGAGCCGAGCCGCGATGTCGT
CTAATAAGGTGGCCGACTACCGGTACTTGCGGAACTTGCGCGAGAAGGAC
CTCGTCGAGGTGGGGAAGGTCTGGAGCGCTCTTGCGGACAATTTTAGTAT
AAGACGACTAATGGATTGAATGCGTTTTATAAGTTTGTGTGTTTTCGAAG
CAGGTAACCCGTTTCTATGCCATGGTTTCTCCCAGTACACACACAGCAAG
GCACACCAAGTAACACCACTGTGTTTCAGTTTTCAGTTATTGATAGTTTT
GTTTGACTTCCACATTCAACAATACCGTGAATGTAGTGGTGCGATGGCGC
CTTGTACTCGAGTGACTTCTCTCGATAAGAACGAATACCACAAACGGCAT
GTAAGGTGATACGTGTATTGCCAACTCCTCTGGATTGGTTGTGGACAACA
CAGCAGCAGTTTGTGCTGACACGGTAGACTACCAAACATTTAACATTTAT
GTGATGGACGCATGCATACACGCCTTTGCATTTGTCGACGCCGAGTGCGG
CAGTACTGGTTTGGACAGCCGTTTTCTCGACCCAAACCTGAGGCTCTCCT
GTAGACTTCATCAGCGATGAGAGGGCAGTTACTCCGGGAAAAGATTAGCG
AGAAGAAAGCTATTCGCTACCCCTGGTACATTTTTATTTCTGGCGAACGG
GGGATCGGTTCCTACGGGCGACCGGCTGGGTCCAACCACTCTCAGAGCCA
TCAGTGATAATTCATTCGTAACGGTCGGGGGTGGTTTTCTTGGCAGCACA
TTGTGCGCGCGGGATCACCACATCGTTCGCGCCTGCGTTTTACTTCGAAG
TACAGTACAAAAAACAAAAACAGGAGCCTTGCAGCCCAGAGTACCTCAGG
AAAGGTGCAGTAGATACACGGAAGGATCCACACACCTGGCTGTTGGATCG
GCATGATGAGGAGACTACAAAGATAC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig152:444019..454794+ >mRNA_P-littoralis_Contig152.100.1 ID=mRNA_P-littoralis_Contig152.100.1|Name=mRNA_P-littoralis_Contig152.100.1|organism=Pylaiella littoralis U1_48|type=CDS|length=891bp|location=Sequence derived from alignment at P-littoralis_Contig152:444019..454794+ (Pylaiella littoralis U1_48) ATGAAGGCATTCTGTTTCCATGTCTTGTTGACTGCAGTCTTGGCTGCAAG CAAGGGCCCCACAGTGTCAGCGTTTCTGCCCGCCACTGCCTCACTTGCTC GACACATCAGCAGTAGCGGCAGTGCTCGCGATGATGCTCTCCTGACGCCC TCCAGCAACAACAACCGACCGTCGTCATTGGGTGCAGTGAAAGCACGAGC AGAAGCTCGCGGGAGGACGCCCCGCTTGGCTTCCGCCCGCGAGGACTGCA AGAGCTGTATGGAAGCGGAGCTGTTGGAGGAGGAGAGGAAGAGAGCCGCG TCGGGACAGGGGGGTGGAGGGAATGGTGCCGCCACCAGGAGGGCGGCTTT GGAGGAGGCCAACCTGCGGGAGAAGTCTCGCAACGCAAAGATCGCCTTGG GATCTTTCTTGTCGGCGGTCGGGCTGTTCTTCTTCCAGCACTCCGCCATC GCCCCCGCGGAGGCAAATCCGGTTGTGCTTCTGCGAGCGATGGAGACCAG CTCAACCCCCCTCGCGACGGCCCTGACGAACGGAAGACCCACCGTGGTGG ACTTCTACGCGGACTGGTGCGAGAACTGCAAGGTGATGGCTCCCAGCATG AGGGAGATCGAGGAGCAGTTCAAGAACCAGATAAATTTTGTTGTCGTGGA CGGCAGCTCCGACAAGAACTACGACTTGGTGGACGCCTTCCGGGTGGACG GTATCCCTCACTTGGCGATGGTCAACGCGGACGGCGAGGTGGAGACTGCA ATTATTGGAACGGTGCCTAAGGATGTGGTGGTTGACGACATCAGGGCTTT GTTGGCCGGCCGGCCTCTACCGTTCAAGGGTTTCGACATGTTCGAAGGCG AAGATCACAACATCAAGGGGCAGATCGAGATCGATGGGTAA back to top
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