mRNA_P-littoralis_Contig152.95.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig152.95.2 vs. uniprot
Match: D8LID8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID8_ECTSI) HSP 1 Score: 271 bits (693), Expect = 1.190e-83 Identity = 133/157 (84.71%), Postives = 145/157 (92.36%), Query Frame = 1
Query: 226 DTFLAREWKDGEAHEVLPKVFLGSMEAAKDKESLKSHGVTHVLTVNGKDPAFEDDFEYKVIKFGGDDGPLTPHLSESLSFVESGVEKGGVLIHCTHGTGRSAAVAIAAAMKAGGKGTPAGVGGFPEAFRLVKSRRPGTDPPMPFQKELGEWESSHSS 696
+ F AREWKDGEAHEVLPKVFLGSMEAAKDKESLK+HGVTHVLTVNGK+PAF+DDF+YKVIKFGG+DGPLTPHLSESLSFV++GV GGVLIHCTHGTGRSAA+AIAAAMK GKGTPAGVG F EAFR+VK RRPGTDPPM FQ+ELGEW SS S+
Sbjct: 8 EEFSAREWKDGEAHEVLPKVFLGSMEAAKDKESLKAHGVTHVLTVNGKEPAFKDDFKYKVIKFGGEDGPLTPHLSESLSFVDAGVAAGGVLIHCTHGTGRSAAMAIAAAMKENGKGTPAGVGDFAEAFRVVKLRRPGTDPPMTFQQELGEWASSKSA 164
BLAST of mRNA_P-littoralis_Contig152.95.2 vs. uniprot
Match: A0A6H5JRY3_9PHAE (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY3_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.120e-57 Identity = 98/115 (85.22%), Postives = 107/115 (93.04%), Query Frame = 1
Query: 226 DTFLAREWKDGEAHEVLPKVFLGSMEAAKDKESLKSHGVTHVLTVNGKDPAFEDDFEYKVIKFGGDDGPLTPHLSESLSFVESGVEKGGVLIHCTHGTGRSAAVAIAAAMKAGGK 570
+ F AR+WKDGEAHEVLPKVFLGSMEAA+DKESLK+HGVTHVLTVNGK+PAF+DDFEY+VIKFGGDDGPLTPHLSESL FV+ GV GGVLIHCTHGTGRSAA+AIAAAMK GK
Sbjct: 8 EEFSARKWKDGEAHEVLPKVFLGSMEAARDKESLKAHGVTHVLTVNGKEPAFKDDFEYRVIKFGGDDGPLTPHLSESLPFVDDGVAAGGVLIHCTHGTGRSAAMAIAAAMKENGK 122
BLAST of mRNA_P-littoralis_Contig152.95.2 vs. uniprot
Match: A0A835Z9I7_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9I7_9STRA) HSP 1 Score: 118 bits (295), Expect = 5.110e-27 Identity = 72/169 (42.60%), Postives = 88/169 (52.07%), Query Frame = 1
Query: 241 REWKDGEAHEVLPKVFLGSMEAAKDKESLKSHGVTHVLTVNGKDPAFEDDFEYKVIKFGGDDGPLTPHLSESLSFVESGVEKGG-VLIHCTHGTGRSAAVAIAAAMKAGGKGTPAGVGGFP----------------------EAFRLVKSRRPGTDPPMPFQKELGEW 678
RE +G A EV P VFLG AA DKESLK G+THVLT NG+ P +DF+YK + + P L +L F++ GG VL+HCTHGTGRSAA+ IA M+ T VG P A +VK RRPGTDPP P+ +L W
Sbjct: 5 RELPNGAAQEVKPGVFLGGSAAALDKESLKGMGITHVLTANGEAPLHPNDFKYKTLSVTEKGDGVAPVLPGALQFIDEATAGGGSVLVHCTHGTGRSAALVIAHVMQ-----TETEVGAQPLLSAAYGIVGVAGMIGDNVDAAAALSIVKERRPGTDPPTPYSAQLDAW 168
BLAST of mRNA_P-littoralis_Contig152.95.2 vs. uniprot
Match: D3BKD3_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BKD3_POLPP) HSP 1 Score: 82.8 bits (203), Expect = 5.770e-14 Identity = 50/145 (34.48%), Postives = 77/145 (53.10%), Query Frame = 1
Query: 259 EAHEVLPKVFLGSMEAAKDKESLKSHGVTHVLTVNGKDPAFEDDFEYKVIKFGGDDGP---LTPHLSESLSFVESGVEKGGVLIHCTHGTGRSAAVAIAAAMKAGGKGTPAGVGGFPEAFRLVKSRRPGTDPPMPFQKELGEWES 684
+A +VLPK+F+GS +AA SLK H +THVL+++ PA+ +D +K + +D L + ++ F++ G GG+LIHC+ G RSA + I+ M K F F+ +KS RP P F +L +ES
Sbjct: 19 DAQQVLPKLFIGSAQAANSVSSLKDHNITHVLSISTNPPAYGNDNHFKCLSISIEDEEKKDLKSYFDQAHKFIDQGRSIGGILIHCSAGVSRSATIVISYLMSFFFKP-------FMYCFQYLKSIRPCIQPNRGFISQLISYES 156
BLAST of mRNA_P-littoralis_Contig152.95.2 vs. uniprot
Match: A0A2P5FWU6_TREOI (Dual specificity phosphatase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5FWU6_TREOI) HSP 1 Score: 79.7 bits (195), Expect = 2.500e-13 Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 1
Query: 250 KDGEAHEVLPKVFLGSMEAAKDKESLKSHGVTHVLTVNG-KDPAFEDDFEYKVIKFGG-DDGPLTPHLSESLSFVESGVEKGG-VLIHCTHGTGRSAAVAIAAAMKAGGKGTPAGVGGFPEAFRLVKSRRPGTDPPMPFQKELGEWESS 687
+D ++ +FLGS EAA++K++LK +TH+LTV +P + ++F YKVI +D L + E F+E GG VL+HC G RS + +A M+ G EA L KS+RP P F +L E+E S
Sbjct: 29 RDNLPSKIEEGLFLGSFEAARNKDALKQSNITHILTVAYFLNPLYRNEFVYKVINVADREDENLKQYFDECFDFIEGAKRSGGGVLVHCLAGKSRSVTIVVAYLMRKHGMS-------LSEALNLAKSKRPIASPNPGFISQLQEYEKS 170
BLAST of mRNA_P-littoralis_Contig152.95.2 vs. uniprot
Match: A0A139A950_GONPJ (Protein-serine/threonine phosphatase (Fragment) n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A950_GONPJ) HSP 1 Score: 79.7 bits (195), Expect = 3.650e-13 Identity = 55/180 (30.56%), Postives = 94/180 (52.22%), Query Frame = 1
Query: 259 EAHEVLPKVFLGSMEAAKDKESLKSHGVTHVLTVNGKD------PAFEDDFEYKVIKFGGDDGPLT---PHLSESLSFVESGVEKGG-VLIHCTHGTGRSAAVAIAAAMKAGGKGTPAGVGGFPEAFRLVKSRRPGTDPPMPFQKELGEWESSHSS*ELTLDNQISFSVVSERQKGARKR 768
E E++P +FLG A+K +++L+SHG+TH++ V P F +F Y ++ D PL PH +S +F+ES + +GG VL+HC G RS AV + M+ F A+ LV+++R +P F+ +L E+E +++ E Q++++ + AR+R
Sbjct: 9 EMQEIVPGLFLGPHTASKQRDALRSHGITHIVVVRDNTEKHIVKPQFPGEFVY--LEINASDHPLENLIPHFHQSTAFIESALAQGGRVLVHCNGGISRSPAVVVGYLMENRKMD-------FRVAYELVQNKRFCVNPNEGFKTQLKEYEPIYTAREAI--RQLNYTPAEMAEHSARRR 177
BLAST of mRNA_P-littoralis_Contig152.95.2 vs. uniprot
Match: A0A803Q8I3_CANSA (Uncharacterized protein n=7 Tax=Cannabis sativa TaxID=3483 RepID=A0A803Q8I3_CANSA) HSP 1 Score: 78.6 bits (192), Expect = 4.790e-13 Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = 1
Query: 250 KDGEAHEVLPKVFLGSMEAAKDKESLKSHGVTHVLTV-NGKDPAFEDDFEYKVIKFGG-DDGPLTPHLSESLSFVESGVEKGG-VLIHCTHGTGRSAAVAIAAAMKAGGKGTPAGVGGFPEAFRLVKSRRPGTDPPMPFQKELGEWESS 687
KD ++ +FLGS+EAA++K LK +TH+LTV + P + D+F YK+I +D + E +F++ GG VL+HC G RSA + +A M+ G EA +LV+S+RP P F +L E+E S
Sbjct: 26 KDKVPSKIEECLFLGSLEAARNKSELKELKITHILTVAHCLVPIYPDEFVYKIISVADKEDTDIKQFFDECFNFIDEAKRTGGSVLVHCVVGKSRSATIVVAYLMRQHGMS-------LSEALKLVRSKRPIVAPNSGFLSQLKEFEKS 167
BLAST of mRNA_P-littoralis_Contig152.95.2 vs. uniprot
Match: A0A7S4C7Z5_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C7Z5_9EUGL) HSP 1 Score: 79.3 bits (194), Expect = 9.250e-13 Identity = 58/173 (33.53%), Postives = 87/173 (50.29%), Query Frame = 1
Query: 271 VLPKVFLGSMEAAKDKESLKSHGVTHVLTVNGKDPAFEDDFEYKVIKFGGDDGPLT-PHLSESLSFVES--GVEKGGVLIHCTHGTGRSAAVAIAAAMKAGGKGTPAGVGGFPEAFRLVKSRRPGTDPPMPFQKELGEWESSHSS*E--LTLDNQISFSVVSERQKGARKRER 774
V P +F+GSM AA++KE L G+THVLT+NG+ PAF D F+Y+V + +D L L ++ F+ G +G VL+HCT G RS ++ IA M G + A + + RP P +L +W+ E + L+ VS +G++KR R
Sbjct: 35 VRPGLFIGSMHAARNKELLLQLGITHVLTMNGRPPAFPDAFQYEVKRTQNEDRSLLLKFLPTNIHFMHEALGESQGKVLVHCTRGVNRSGSMVIAYLMWTEGLS-------YDAALQQARVARPQILPRDGMVTQLRQWDQMLQDPERVVALNLPPRADGVSPAGRGSKKRRR 200
BLAST of mRNA_P-littoralis_Contig152.95.2 vs. uniprot
Match: UPI0006448580 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448580) HSP 1 Score: 76.3 bits (186), Expect = 8.830e-12 Identity = 52/145 (35.86%), Postives = 78/145 (53.79%), Query Frame = 1
Query: 259 EAHEVLPKVFLGSMEAAKDKESLKSHGVTHVLTVNGKDPAFEDD-FEYKVIKFGGDDGP-LTPHLSESLSFVESGVEKGGVLIHCTHGTGRSAAVAIAAAMKAGGKGTPAGVGGFPEAFRLVKSRRPGTDPPMPFQKELGEWESS 687
+A EVLP++++GS +AA LK H +THVL+V+ P ++D FE I+ ++ + + S + SF+E G GGVLIHC+ G RSA + I+ M K F F+ +KS RP P F +L +ES+
Sbjct: 19 DAQEVLPRLYIGSAQAASCVNQLKDHNITHVLSVSTNPPNYKDKKFECLSIEIEDEEKKEIHNYFSLAHSFIEKGRGYGGVLIHCSAGVSRSATIVISYLMSLFYKP-------FMYCFQFLKSIRPCIQPNRGFISQLMSYEST 156
BLAST of mRNA_P-littoralis_Contig152.95.2 vs. uniprot
Match: V3ZYI8_LOTGI (Protein-tyrosine-phosphatase n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZYI8_LOTGI) HSP 1 Score: 77.8 bits (190), Expect = 9.160e-12 Identity = 58/171 (33.92%), Postives = 89/171 (52.05%), Query Frame = 1
Query: 268 EVLPKVFLGSMEAAKDKESLKSHGVTHVLTVNGKDPAFE--DDFEYKVIK-FGGDDGPLTPHLSESLSFVESGVEKGGVLIHCTHGTGRSAAVAIAAAMKAGGKGTPAGVGGFPEAFRLVKSRRPGTDPPMPFQKELGEWESSHSS*ELTLD-------NQISFSVVSERQ 750
E++ K+FLG +EAA D ESL+ G+TH++T++ + E D F K I +D L ++ E SF++ G+ KGGVL+HC G+ RSA + IA M F EA VK+ RP P F +L +ES + ++ + N++S SV + +Q
Sbjct: 3 EIIDKLFLGGVEAALDIESLEKFGITHIITIDIRPLCQETTDKFTTKYIHAMDLEDTDLLTYIDECNSFIDDGLVKGGVLVHCFVGSSRSATIVIAYLMNKLNLT-------FQEALDKVKTLRPLVKPNQGFLHQLHLYESMGNKIDVKSNCFRQYRLNKLSLSVQAGQQ 166 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig152.95.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig152.95.2 >prot_P-littoralis_Contig152.95.2 ID=prot_P-littoralis_Contig152.95.2|Name=mRNA_P-littoralis_Contig152.95.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=233bp MLRSVLRRVSPYSLSRRPSSVIVRAPSAPTSSGAESSLSFSFLFSSPAASback to top mRNA from alignment at P-littoralis_Contig152:429629..434199- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig152.95.2 ID=mRNA_P-littoralis_Contig152.95.2|Name=mRNA_P-littoralis_Contig152.95.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4571bp|location=Sequence derived from alignment at P-littoralis_Contig152:429629..434199- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig152:429629..434199- >mRNA_P-littoralis_Contig152.95.2 ID=mRNA_P-littoralis_Contig152.95.2|Name=mRNA_P-littoralis_Contig152.95.2|organism=Pylaiella littoralis U1_48|type=CDS|length=699bp|location=Sequence derived from alignment at P-littoralis_Contig152:429629..434199- (Pylaiella littoralis U1_48)back to top |