prot_P-littoralis_Contig152.88.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig152.88.2
Unique Nameprot_P-littoralis_Contig152.88.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length482
Homology
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BLAST of mRNA_P-littoralis_Contig152.88.2 vs. uniprot
Match: D8LID6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LID6_ECTSI)

HSP 1 Score: 470 bits (1210), Expect = 6.180e-160
Identity = 279/475 (58.74%), Postives = 329/475 (69.26%), Query Frame = 0 
Query:   27 LRDAREDLSCDRKERLGRGGDTAPPRLSASGFRSLASLLRQRVRADEIDAAAPSTNRPQASTSRSAAAAQSDYFSADLTDSRPRRVRNLVSLCISQIGKDFLAYRADDGAIAQAFGLLPPPCLARLSRSASARGTVANHNIGLLCSPGVNTLWLRGRFTDEGGDTLLPALHATDTPDEGADTPEEVSFDLAEVYRDGDSG----GDGNGSAKGAPPRHASA----ATVSHRTSSSSKSGRNALGEEDEDWETADDRIGVSLRGGVSLTSLDISSPRITAGFVIRLVVQIPSLRRLGLRGSLGVVGGPDAVCDNVPHLAALRELDLSHCTWFCDTTLRRLAKTLVLGPSPATAQPSEE-------------DEPDPTMPAADGTSGWGAASAPAPRTLVLRDNAGSETPGVRV-VAPGGVRAYGGATRPNISGSPHRFRTFTVICARTAVTEKGARVAEALSPGLLVVL-EDQPAA 478
            +RDAREDLS DR++ LGRGGD APPRLSA+GFRSLA+LLRQRVRADEIDA AP   R + + +    AA S+YFSAD T++RPR+   L+SLCI QIG+DFLAYRADD AIA+AF LLP PCL+RLSRSASA G VA+HNIGLLCSPGV+TLWLRGRFTDEG   LLPAL+A + P+ G+   E     LAEVYRDG +     G+   +A G   R AS       +    +  + +G   +   +E+WETA DRI  SLRGGVSLTSLD+SSPR+TAGFV RL  +IPSLRRLGLRGS GVVGGPD VCD+VP LAALRELDLSHCTWFCD TLRRLAK+L L  SPA   P  +             DE +        T GWGAA AP+   L    +AGS   G    +  G  R  G    P++  S HRFRTFTV+CARTAVTEKGA+ AE +SPGL+V+L  D+PAA
Sbjct:    1 MRDAREDLSWDRRQNLGRGGDAAPPRLSATGFRSLATLLRQRVRADEIDAVAPPAVRSE-NLAGKVVAAPSNYFSADWTETRPRKTCTLLSLCIRQIGRDFLAYRADDDAIAEAFLLLPSPCLSRLSRSASAGGNVADHNIGLLCSPGVSTLWLRGRFTDEGVGALLPALNAGNRPNGGSHAAE-----LAEVYRDGTAADCLAGNAVDTAMGTESRVASGDDGLVALIQPAAYHAAAGEAIVEGAEEEWETACDRIEASLRGGVSLTSLDLSSPRVTAGFVKRLTARIPSLRRLGLRGSFGVVGGPDFVCDHVPRLAALRELDLSHCTWFCDLTLRRLAKSLSLRASPAAGDPENQGPHAGSATYLQDLDEAE--------TRGWGAAFAPSTNNLAFAGHAGSGPSGSDADLVSGASRESGEKELPSLGRSLHRFRTFTVVCARTAVTEKGAKAAELMSPGLMVILVADKPAA 461
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig152.88.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LID6_ECTSI6.180e-16058.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 248..366
e-value: 5.6E-7
score: 30.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..258
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 278..363

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig152contigP-littoralis_Contig152:405814..416081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig152.88.2mRNA_P-littoralis_Contig152.88.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig152 405456..416116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig152.88.2 ID=prot_P-littoralis_Contig152.88.2|Name=mRNA_P-littoralis_Contig152.88.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=482bp
MPGRKKGRQKGAAGSKAQSARKWNEALRDAREDLSCDRKERLGRGGDTAP
PRLSASGFRSLASLLRQRVRADEIDAAAPSTNRPQASTSRSAAAAQSDYF
SADLTDSRPRRVRNLVSLCISQIGKDFLAYRADDGAIAQAFGLLPPPCLA
RLSRSASARGTVANHNIGLLCSPGVNTLWLRGRFTDEGGDTLLPALHATD
TPDEGADTPEEVSFDLAEVYRDGDSGGDGNGSAKGAPPRHASAATVSHRT
SSSSKSGRNALGEEDEDWETADDRIGVSLRGGVSLTSLDISSPRITAGFV
IRLVVQIPSLRRLGLRGSLGVVGGPDAVCDNVPHLAALRELDLSHCTWFC
DTTLRRLAKTLVLGPSPATAQPSEEDEPDPTMPAADGTSGWGAASAPAPR
TLVLRDNAGSETPGVRVVAPGGVRAYGGATRPNISGSPHRFRTFTVICAR
TAVTEKGARVAEALSPGLLVVLEDQPAACYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf