mRNA_P-littoralis_Contig152.68.3 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig152.68.3 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 275 bits (703), Expect = 3.010e-74 Identity = 231/835 (27.66%), Postives = 369/835 (44.19%), Query Frame = 3
Query: 969 KRRKTSNVWHHFVQFTPADSDGKNVKCIVEKWLPASGLLPARKYVCGARFTHRAADRKNNISATGTSGLVKHLHNEHSTVWAATDDGRGSREAR------TTRGAILHGSSDQKDGKPAAGSRSIAQHFIQPMTPTEKRKHQVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREVTTEFFAPIVGDANAEPAKIYVAATVDQGGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGSFVKATQTGTCKNPELRNLTAVMTALAGASAIPLATTTPSKSCKRSWTNCAPLWRFSAAMIRGGGQCMRCFSGRCASTSPC-----------RRFSQRT*TSRRSARARLA-------RRSGRLPVRLSVSFKTPHW*ARRSRVDDMALWAWRSTQCTCC*RRCRNRHRTSLALTLSMATPKISP*RTFSRRFRSCWKS*WTTWDPGAWRVLRSRRRRYA*CSIRVSSPAA---------SLFVPTGVQPAAGCSQRGAGEVGGFSGTASASADVGETGNASGGSSEASPGAAPEAAAGVNPSGVNPCAGGGDPPQPAKMSRMERIRASLSTQVS--GPTGDVDA---AEDRADVAEREFAAYMKEAAATNDAKFDLLKYWNARGVDGV-DASGNVVAPARWPHLSLLARVYAGVDTTSCQAERNFFALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVEQELAALKARHDANAKAVVAVQQAREGSTVTLN 3356
KRR T+ W +FTP+ +D KNV C+V+K G C ++ K S GT+GL KH+ H T + G++ R G GSS A+ S S+ + + + + +R+VI CC+++RP M H GF+ F+G LSP YV T+ T LD L + V+ +++ L+ + C +G+ G F G Q DLT+ G E+ T TVS++ +G T++ R+ L +AFPGTHTA D+ PWI E+T E+FA +G+ + EP +++A TVDQGGN+VNA +++GVPV+ C HR+N+ + W +GIAG+ + N + +L + AL G + K +R + +++ + A P R+ +Q T + L+ R G +S + H R D + A +T+ L LS A + + K+ A ++ RR+ + S ++ VQP SE +P AP +N V P + + K+SR+E RA+ S G +G V A A +R + ERE Y+ E F++L +WN RG D V +GNV +PA P+L+ +AR++ G++ +SCQAERNF AL ++ +R L RK+E+M+L+RLNRHL+ +++ ++ +A+ +A+ VA Q+ R ++ L+
Sbjct: 78 KRRLTAWCWQVMSRFTPSIND-KNVVCLVKK---KDGTT------CNHLMKWTPSEGKQRGS--GTTGLTKHIEKFHPTTAQKIKEEEGTQAERKESIQAAIAGDSSAGSSTALPSASASSSSSLVNYMVPKLDKKRREMADLRFVIWCCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGE-DVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGRR--------NKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNATE-----------PEEMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSA--LMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQFDVQP-----------------------------------SEPAPAPAPV----LNVDPVEPAS------KRKKLSRLEERRAARVAAASDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQEERANKSIDLS 833
BLAST of mRNA_P-littoralis_Contig152.68.3 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 257 bits (657), Expect = 4.100e-68 Identity = 234/834 (28.06%), Postives = 375/834 (44.96%), Query Frame = 3
Query: 969 KRRKTSNVWHHFVQFTPADSDGKNVKCIVEKWLPASGLLPARKYVCGARFTHRAADRKNNISATGTSGLVKHLHNEHSTVWAATDDGRGSREARTTRGAILHG----------SSDQKDGK-----PAAGSRSIAQHFIQPMTPTEKRKHQVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREVTTEFFAPIVGDANAEPAKIYVAATVDQGGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGSFVKATQTGTCKNPELRNLTAVMTALAGASAIPLATTTPSKSCKRSWTNCAPLWRFSAAMIRGGGQCMRCFSGRCASTSPCRRFSQRT*TSRRSARAR----------LARRSGRLPVRLSVSFKTPHW*ARRSRVDDMALWAWRSTQCTCC*RRCRNRHRTSLALTLSMATPKISP*RTFSRRFRSCWKS*WTTWDPGAWRVLRSRRRRYA*CSIRVSSPAAS-LFVPTGVQPAAGCSQRGAGEVGGFSGTASASADVG------ETGNASGGSSEASPGAAPEAAAGVNPSGVNPCAGGGDPPQPAKMSRMERIRASLSTQVSGPTGDVDAAEDRAD------VAEREFAAYMKEAAATNDAKFDLLKYWNARGVDGVDAS-GNVVAPARWPHLSLLARVYAGVDTTSCQAERNFFALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVEQELAALKARHDANAKAVVAVQQAREGSTVTL 3353
KRR TS W+ +F+P+ +GKNV C+V+K A G R ++ A +K TGTSG+ KHL H + G+ E T G + + +DG+ A S S+ + + MT K R+V+ CC+D+RP + GF+ F+G LSP YVT T+ KST + LD L V ++++ L+ + +G+ GPF G Q DLT+ G E+ T TV+F+ +G T+M R+ L +AFPG+HTA D+ PWI ++T E+F+ +G++ +P+ +++A TVDQG N++NA ++GV V+ C HRLN+ + W +GIAG NP + L + A+ G + K +R + ++ + A P + ++ + R L + +R+ S T H + ++ T R + T + L P+ P T + T VL+ + R S +V+ S L P + + G+ ++ A D+ + G A+ AAP A +N V P P+ K+SR+E RA+ + + + ED++ + ERE Y+ E + F++L YWN RG D V A+ G V +PA P+L+ +AR+Y G++ TSCQAERNF AL ++ +R LP K+E+M+ +RLNRHL+ +++ + KA A++ +A Q+ R TV L
Sbjct: 71 KRRLTSWTWNFASRFSPS-INGKNVVCLVKK---ADGTPCGRLM----KWEGAALGKKG----TGTSGISKHLEICHKSEVDKHKAKVGASEDNTAPIVAALGEFFFFCPRLKNKESRDGRVYRLYSAPSSSSLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGES-VQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--------NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDT-HVGQAMFILHELIEMLGEDTH------PIRQPNATVMPLP-----PEGIP--TDDTQVMDL-----TAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADL-----RKKAEDDLKAVIAKFDVGPAT---------AAPAPAPVMNLDPVEPA------PKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQEERANQTVDL 844
BLAST of mRNA_P-littoralis_Contig152.68.3 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 231 bits (590), Expect = 8.250e-61 Identity = 195/707 (27.58%), Postives = 316/707 (44.70%), Query Frame = 3
Query: 1335 FIQPMTPTEKRKHQVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREVTTEFFAPIVGDANAEPAKIYVAATVDQGGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGSFVKATQTGTCKNPELRNLTAVMTALAGASAIPLATTTPSKSCKRSWTNCAPLWRFSAAMIRGGGQCMRCFSGRCASTSPCRRFSQRT*TSRRSARAR----------LARRSGRLPVRLSVSFKTPHW*ARRSRVDDMALWAWRSTQCTCC*RRCRNRHRTSLALTLSMATPKISP*RTFSRRFRSCWKS*WTTWDPGAWRVLRSRRRRYA*CSIRVSSPAASLFVPTGVQPAAGCSQRGAGEVGGFSGTASASADVGETGNAS-----------------GGSSEASPGAAPEAAAGVNPSGVNPCAGGGDPPQPAKMSRMERIRASLSTQVSGPTGDVDAAEDRAD------VAEREFAAYMKEAAATNDAKFDLLKYWNARGVDGVDAS-GNVVAPARWPHLSLLARVYAGVDTTSCQAERNFFALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVEQELAALKARHDANAKAVVAVQQAREGSTVTL 3353
+ MT K R+V+ CC+D+RP + GF+ F+G LSP YVT T+ KST + LD L V ++++ L+ + +G+ GPF G Q DLT+ G E+ T TV+F+ +G T+M R+ L +AFPG+HTA D+ PWI ++T E+F+ +G++ +P+ +++A TVDQG N++NA ++GV V+ C HRLN+ + W +GIAG NP + L + A+ G + K +R + ++ + A P + ++ + R L + +R+ S T H + ++ T R + T + L P+ P T + T VL+ + R S +V+ S + ++ S +D E G+A G + A+P AP +N V P P+ K+SR+E RA+ + + + ED++ + ERE Y+ E + F++L YWN RG D V A+ G V +PA P+L+ +AR+Y G++ TSCQAERNF AL ++ +R LP K+E+M+ +RLNRHL+ +++ + KA A++ +A Q+ R TV L
Sbjct: 1 MVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGES-VQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--------NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDT-HVGQAMFILHELIEMLGEDTH------PIRQPNATVMPLP-----PEGIP--TDDTQVMDL-----TAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLR--------------------SLDSDQLENGSADLRKKAEDDLKAVIAKFDVGPATAAPAPAPV----MNLDRVEPA------PKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQEERANQTVDL 649
BLAST of mRNA_P-littoralis_Contig152.68.3 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 215 bits (547), Expect = 3.070e-55 Identity = 197/694 (28.39%), Postives = 315/694 (45.39%), Query Frame = 3
Query: 1335 FIQPMTPTEKRKH-QVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREVTTEFFAPIVGDANAEPAKIYVAATVDQGGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGSFVKATQTGTCKNPELRNLTAVMTALAGASAIPLATTTPSKSCKRSWTNCAPLWRFSAAMIRGGGQ--CMRCFSGRCASTSP-----CRRFSQRT*TSRRSARARLARRSGRLPVRLSVSFKTPHW*ARRSRVDDMALWAWRSTQCTCC*RRCRNRHRTSL---ALTLSMATPKISP*RTFSRRFRSCWKS*WTTWDPGAWRVLRSRRRRYA*CSIRVSSPAASLFVPTGVQPAAGCSQRGAGEVGGFSGTASASADVGE-TGNASGGSSEASPGAAPEAAAGVNPSGVNPCAGGGDPPQPAKMSRMERIRASLSTQVS-------GPTGDVDAAEDRADVAEREFAAYMKEAAATNDAKFDLLKYWNARGVDGVDAS-GNVVAPARWPHLSLLARVYAGVDTTSCQAERNFFALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVEQELAALKARHDANAKAVVAVQQAREGSTVTLN 3356
F+ P ++R+ +RYVI CC++ RP M + GF+ FVG LSP YV T+ +T + +LD L V ++ L+ + C +G+GG F G Q DLT+ G E+ T VS++ +G T++ R++L T+AFPG+HTA D+ PWI +T E+F ++G + E +++A TVDQG N+VNA ++GVPV+ C HR+NS + W +GIAGS TCKN ++ L A L G + K +R A L R + R + + GR RR +Q+ +++ R A S+ R + L +Q T ++ +SL + + T + + R + G + L+ R S+ + P T ++ G+ ++ A AD+ TG + S+ ++P AP VN P P SR+E G T A R + ERE Y+ E + F+LL +WN RG D V A+ G V +PA P+L+ +AR++ G++ TSCQAERNF AL ++ D+ L ++E+M+L+RLN+HL+ + +A +A +A+ Q+ R + + ++
Sbjct: 4 FVAPKMLQKQREFVDLRYVIWCCINPRPMQMRYDDGFKLFVGALSPQYVDTTMASTTFNKLLDTLHDRVEQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMG-GSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSAT------TCKNKPMKKLAA----LVGVFSHSAVNNDMLKELQRLE---ADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHL-----SQATFIINEGEGQNESSLDGISTEETQVTGLTLEAQDVVQVLREMMD------EKGVGKALQRVER----LSVLLD-PRRKTLDDTHLR-------NGSSDL-----KTQAEADLKAFTGKFAQESAPSTPAPAPV----VNVDTAEPARKKKXP-----TSRLEXXXXXXXXXXXXXXXXXXGTTDPQAAGTGRRVLIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEVRAYDAAVAWARAMAANSAEKSAVAQEERANTAIDVS 646
BLAST of mRNA_P-littoralis_Contig152.68.3 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 197 bits (500), Expect = 3.620e-48 Identity = 227/853 (26.61%), Postives = 353/853 (41.38%), Query Frame = 3
Query: 969 KRRKTSNVWHHFVQFTPADSDGKNVKCIVEK----WLPASGLLPARKYVCGARFTHRAADRKNNISATGTSGLVKHLHNEHSTVWAATDDGRGSREARTTRGAILHGSSDQKDGKPAAGSRSIAQHFIQ---PMTPTEKRKHQVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIRE--------VTTEFFAPIVGDANAEPAKIYVAATVDQGGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGSFVKATQTGTCKNPELRNLTAVMTALAGASAIPLATTTPSKSCKRSWTNCAPLWRFSAAMIRGGGQCMRCFSGRCASTSPCRRFSQRT*TSRRSARARLARRSGRLPVRLSVSFKTPHW*ARRSRVDDMALWAWRSTQCTCC*RRCRNRHRTSLALTLSMATPKI--------SP*RTFSRRFRSCWKS*-------------------------WTTWDPGAWRVLRSRRRRYA*CSIRVS-SPAASLFVPTGVQPAAGCSQRGAGEVGGFSGTASASADVGETGNASGGSSEASPGAAPEAAAGVNPSGVNPCAGGGDPPQPAKMS--------RMERIRASLSTQVSGPTGDVDAAEDRADVAEREFAAYMKEAAATNDAKFDLLKYWNARGVDGVDASGNVVAPARWPHLSLLARVYAGVDTTSCQAERNFFALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVEQELAALKARHDANAKAVVAVQQAREGSTVTLN 3356
K+ K S VW +F P +GKNV C+ K W PA G G +H +K + + L K L ++H+T T GR + A G + K A S + ++Q P+ + + R+V+ C ++MRP +M + G++ +G L P YV T+ +T ++IL + + + T L+ H +SC KLG+ GPF G Q DLT+ E+ T +VS+I T + R+ L T+AFPG+HTA+D++PWI + +TTEFFA ++G+ N +P +++A TVDQGGN+VNA ++ V VL C HRLNS W +GI GS +TG +NP + L + A+ G + K +R ++ +IR R T S A + R L ++ ++ ++ + ++ W T C SL ++ T KI S R R + T V+ SR + + R+ +L P + G+ ++ ASA ADV +EA G+A + P P K R++R+ S + + R + ERE Y+ E A + F LL++W R A V P PHL+L+AR++ G+++TSCQAERNF AL ++ +R+ LP K+E+++ LRLNR IP + + A KA + V V+ G V L
Sbjct: 69 KKTKRSWVWQVCREFKPL-INGKNVFCMACKHLMLWKPADGT--------GGMSSHY---KKKHPA------LYKALMDDHTT----TAQGRANVAAAVAFDPKPTGKATGKGKGKAGSSTPSIKDYMQTGNPLLASTEAAANRRFVVWCAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGE-NVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSI----RTG--ENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYE----LIR------------------------RNDTRWASQHAMMVRL---LKLKKAI---VEYFRDNENNNRKLSSREWTVTNEVC-----------SLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADL-----KASAIADVKSVAKTF---AEADLGSASS----XXXXXXXXXXXXXNQPAPKKQKVLSDLEERRLQRLAKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAARCQEKVAQVEAEAAGDAVVLT 834
BLAST of mRNA_P-littoralis_Contig152.68.3 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 192 bits (488), Expect = 1.170e-47 Identity = 93/234 (39.74%), Postives = 147/234 (62.82%), Query Frame = 3
Query: 1335 FIQPMTPTEKRKH-QVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREVTTEFFAPIVGDANAEPAKIYVAATVDQGGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGSFVKATQTGTCKNPELRNLTAVM 2033
F+ P ++R+ +RY+I CC+++RP M + GF+ FVG LSP YV T+ +T + +LD L ++ ++ L+ + C +G+GG F G Q DLT+ G E+ T VS++ +G T++ R++L T+AFPG+HTA D+ PWI +T E+ ++G + E +++A TVDQG N+VNA ++GVPV+ C HR+NS + W +GIAGS TCKN ++ L A++
Sbjct: 4 FVAPKVLQKQREFADLRYMIWCCINLRPMQMRYDDGFKLFVGALSPQYVDTTMAATTFNKLLDTLHDRMKQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMG-GSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVT------TCKNKPMKKLAALV 230
BLAST of mRNA_P-littoralis_Contig152.68.3 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 176 bits (446), Expect = 5.890e-43 Identity = 91/225 (40.44%), Postives = 139/225 (61.78%), Query Frame = 3
Query: 1377 VRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTE-MERLTLTTKAFPGTHTASDVDPWIREVTTEFFAPIVGDANAEPAKIYVAATVDQGGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGSFVKATQTGTCKNPELRNLTAVMTALAG 2048
+RYVI CC+++RP M + GF+ FVG LSP YV T+ +T + +LDAL V+ ++ L+ + +G+GG F G DLT+ E+ T TVS++ +G T+ + R+ L T+AFPG+HTA D+ PWI +T E+F ++G + +P +++ TVDQG N+VNA+ ++GVPV+ C HR+NS + W +GIAG TCKN + +L + A G
Sbjct: 15 LRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPS-VQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGC------ARTCKNKLMGDLMKKLAASVG 232
BLAST of mRNA_P-littoralis_Contig152.68.3 vs. uniprot
Match: A0A6H5KVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP4_9PHAE) HSP 1 Score: 155 bits (392), Expect = 2.240e-34 Identity = 98/284 (34.51%), Postives = 146/284 (51.41%), Query Frame = 3
Query: 969 KRRKTSNVWHHFVQFTPADSDGKNVKCIVEKWLPASGLLPARKYVCGARFTHRAADRKNNISATGTSGLVKHLHNEHSTVWAATDDGRGSREARTTRGAILHG----------SSDQKDGK-----PAAGSRSIAQHFIQPMTPTEKRKHQVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIRE 1775
KRR TS W+ +F+P+ +GKNV C+V+K A G R ++ A +K TGTSG+ KHL H + G+ E T G + + +DG+ A S S+ + + MT K R+V+ CC+D+RP + GF+ F+G LSP YVT T+ KST + LD L V ++++ L+ + +G+ GPF G Q DLT+ G E+ T TV+F+ +G T+M R+ L +AFPG+HTA D+ PWI +
Sbjct: 1155 KRRLTSWTWNFASRFSPS-INGKNVVCLVKK---ADGTPCGRLM----KWEGAALGKKG----TGTSGISKHLEICHKSEVDKHKAKVGASEDNTAPIVAALGEFFFFCPRLKNKESRDGRVYRLYSAPSSSSLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEK 1426
BLAST of mRNA_P-littoralis_Contig152.68.3 vs. uniprot
Match: A0A6H5KFJ9_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE) HSP 1 Score: 145 bits (367), Expect = 1.270e-31 Identity = 89/264 (33.71%), Postives = 131/264 (49.62%), Query Frame = 3
Query: 1002 FVQFTPADSDGKNVKCIVEKWLPASGLLPARKYVCGARFTHRAADRKNNISATGTSGLVKHLHNEH-STVWAATDDGRGSREARTTRGAILHGSSDQKDGKPAAGSRSIAQHFIQPMTPTEKRKHQVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREVTTEF 1790
F +FTP+ +D KNV C+V+K G C ++ N TGTS L KH+ H +T D+G + R AI+HG + +A + M + +R+VI C+++RP M H GF+ F+G LSP YV T+ T LD L V +++ L+ + C +G+ G F G Q DLT+ G E+ T TVS++ +G T++ R+ L +AFPGTHTA D+ PWI E+ F
Sbjct: 209 FGRFTPSIND-KNVVCLVKK---KDGTT------CNHLMKWTPSE-SNKQRGTGTSWLSKHIAKAHPATAKTRRDEGTPADRKEPIRAAIVHGRFIDRFIISKRVELIVAGDMVPKMDKKRREMADLRFVIWRCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYGKVNTSVVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVKKGSTDVTRVALACRAFPGTHTADDIRPWIEELRCLF 461
BLAST of mRNA_P-littoralis_Contig152.68.3 vs. uniprot
Match: D7G031_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G031_ECTSI) HSP 1 Score: 135 bits (341), Expect = 1.340e-28 Identity = 107/391 (27.37%), Postives = 167/391 (42.71%), Query Frame = 3
Query: 1098 YVCGARFTHRAADRKNNISATGTSGLVKHLHNEHSTVWAATDDGRGSREARTTRGAILHGSSDQKD-----------GKPAAGS-RSIAQHFIQ----------------------PMTPTEKRKHQVRYVIMCCVD-MRPFSMAHRAGFQYFVGGLSPAY-------------------------VTETIHKS----TLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHG--------------TEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREVTTEFFAPIVGDANAEPAKIYVAATVDQ-----GGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGSFVKATQTGTCKNPELRNL 2021
Y+CGA +TH + + +GTSG++ HL +H + A S + R GA++ S+ G+P S+ Q PM+ + H R+V+MC + + P S+ G + FVGGL+P Y VTE + + T + IL L A VR + + L+ H +SC++LGW GPF G+Q D T G E CT +VSF+ + RL + + F G + + WIRE+T + F I +EP IY+AAT+ G + AF+ MGVPVL+C+ +RL+S ++ +G A + C N ++R++
Sbjct: 7 YLCGATYTH--VESRPGNGGSGTSGMLHHLFKKHPLIHAEIIRANSSSKMRKAEGAVVKESAASSXXXXXXXXXXXKGRPQPHHPSSLGSALAQLRACSLPGXXXXXXXXXALPSPPMSAEDCLPHDRRFVLMCALQTLDPGSLCSDLGHRLFVGGLAPGYGAGRRLARRRSGLAPSGSSYAASTAVTEGANGARAAGTANAILQDLCAGVRREVASALRAHSESCRRLGWSGPFVGLQVDSTGLPGGEGXXXXXXXXXXXEEVCTASVSFVSEDFGGLVRLAIGARCFRGRQMSHAKETWIRELTADLFTSICH--KSEPKDIYLAATIGGCSGGGGSSFGRAFQDMGVPVLVCSSYRLHSAVSCSLGCAAAGGAGEDK--CANAKMRDV 391 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig152.68.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig152.68.3 >prot_P-littoralis_Contig152.68.3 ID=prot_P-littoralis_Contig152.68.3|Name=mRNA_P-littoralis_Contig152.68.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=482bp MSTPIAGDGGGGSESAVPPTPSSGDPDGGVGTSPETAVSVVAGTAAASSSback to top mRNA from alignment at P-littoralis_Contig152:345621..350632- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig152.68.3 ID=mRNA_P-littoralis_Contig152.68.3|Name=mRNA_P-littoralis_Contig152.68.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5012bp|location=Sequence derived from alignment at P-littoralis_Contig152:345621..350632- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig152:345621..350632- >mRNA_P-littoralis_Contig152.68.3 ID=mRNA_P-littoralis_Contig152.68.3|Name=mRNA_P-littoralis_Contig152.68.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1446bp|location=Sequence derived from alignment at P-littoralis_Contig152:345621..350632- (Pylaiella littoralis U1_48)back to top |