mRNA_P-littoralis_Contig152.46.6 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig152.46.6 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI) HSP 1 Score: 1313 bits (3399), Expect = 0.000e+0 Identity = 984/2008 (49.00%), Postives = 1168/2008 (58.17%), Query Frame = 3
Query: 936 GAVELAEPLVVAANSSVTITGAQGADGEAAALDGGGVTGLLDLGAGSSLRLESVILRNARRGAGNGGAIRAEAAGCSVAALGSTFEGNEAVSESG-EGSGGALALGAGATARLENCTLSGNHAKRNGGGVWSDG-VDSSLTLTDCQLKDNXXXXXXGVGMGSRSTAVFEGSTVLGNYAEFEGGGVYGVNATVVVAVGSEFVNNTMGLTGGGGISLHDESNLTISDSTFRRNYYAGNDSFSHASGGGVRVIGTSSPSRGATVSIVDSLFEDNYAPHGGGLWLSSVSLLTVARSVLHGNNASDFGGGASVESTEVAEFTACNFTESYAFNRAGGLELADSSVTISGCLFEGNSNRVEGGAISAEDNSVVTIKTCTFVNNFIVD--GAGSGGAITVSGATLRATNCSFENNLADLTGTLYDAGTDPLEGGGAVMLENFSNATFVACNFSSNVGAYGGAILAEEASAATLTGVVMTDNEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVELDGVAFVGNSAXXXXXXXXLFTSGSNATVQGGRFVSNNASTSGGHVLATGADTLVNLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSASVSASAAQQPLAFTGGRAGVNGGAVHASAGAVVTLTFAEMSGNQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVADAAFVGTSSSFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSFIDAKLVAGRCLVTDNTASADGGGLRVSYQTTAVMDEXXXXXXXXXXXXXXXAVDASSGTSDDALFAANASSSFTCQGGGTFEGNEAGERGGAVYVTRNSDVTLDSCNTSRNAASLGASVYASHSFVSLRAGSVLAYDQVPTGAMVYALKTQLTANNTRFLALEDCPSILAVQTTEGSYMKALGCSFSGWEGAFVVLAAGKLEMDSCDFRGSQADVLVAAMNASSPARIRNTAVGIENYPSLASASYSSSTEGGATTTVLAVNVMSCASDDPCGIDNSSSXXXXXXXXXXXXNGVVGAVLTEGQRRSRRLETSSSIDKEGEGEEGAGFAERGCVDGILGVYCPCFIATITGEEECLEESTTLQLEAAADPLLAVGIQGTIETTLNVTAA--GGAVVWEVGEVAGPFSEEAVIWTIVPNVGILEEGATATIAVTGRLDSDLYGMTKAQFKAESLLSGDSALAMVNTTFYYCIEGQYYLNDGKCLLCSDLDLGVEGLNCDEPGVLRATLPVAAGYWRSSNDTTVIRECLNDEACEGGAVIQDSDDYCALGYQGPYCAVCSPGHAGGISSRCHECTEAFRAGMIFLAVVGGVLAVAFLWLLLRFLLQDPTGSRSFLSCRSNRVASIVSRAKQLPLYKLKTPIVVFQILTQYAEITNVGFPVAFSKFLTFWNAVNLDVGWMLSASCIIAPDFYGRLLLVTLAPMALAAALGCTFLFARRRVTTSGLSKAHSAAS----------------------------------NG--MSASRQLSVIRRRHMAVLVTGTFLVYSTVSTTVFQTFACDTLDELKTTYLRADYSLMCNTAAHTSYRIYASVMILVYPIGIPLMYAWLLFRHHHRIYPKQALRDGVSPERRLADPKISHTVVLWQAYRPSRYYYEVIECARRLLLTGALVFILPDSAGQAGVACVLSVLTVCIFITLRPFSDPNDSHLYVLGCLLIFLSMFVSLVPKVAIADEDEQSQTFLSWLLIVLSMILWGMAFAQCFLEARWPTRKDAGRFDSLEASSAVNLMGSDCFSRRSG------------TGESNVSPKDRNLT--PPDFHDFPHGNSGASRKSSGNNNGNGNLESGGMRVVEKG-----------------------EYHNSVTAAAGQL--HPSGYADPVMPRFDEGLHGSGAGWGNSXXXXXXXXXXXXXXMGADHAGLSNLSQTSGNTYGPLAAATVECGGGSSSRGSGSGGGNKFPPINLSDDDSAPDSPTMAEQMFLRRVGIG 6716
G V LAEPLVVAA SS+ I G GADG AA+DGGGVTGL+DLG GSSLRLE V LRNA R +GNGGAIRAEA GCSV A+ S+FEGN+A S EG GGALALG G +A L+NC +SGNHA+++GG + G XXXXXXGV + RST +GST+L GISL SNLT+SDS+F NYY G+ +F GGGV++IG+ + + T+SI DSLFE N A GGGL++SS +LTV+R+V H N A FGGGA +ES VA ++ NFT +A+N V+IS CLFEGNSN+ GGAI E+ + V++ TF NNFI GAGSGGA++VS TL AT+C+FENN A YD TDPLEGGGAV++ + SN GGA+LAE +S ATLT V T N+A XXXXXXXXXXXXXXXXXX XXXXXXXX G+NATV GG F +N A+ +GGHV+A A T V LL +A+ PL +GG AG +GGAVHA G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VADA FVGT ++F XXXXXXXXXXX +S +DA L DGGGLR SY + V+D XXXXXXXXXXXXXX A+DASSGT +D L AANASS+ C+GG TFEGN AGERGGAVYVTR S ++ + C + N+ASLGA L TQL A N F +++D PS+LAV+ T GS M+AL CSFSGWEG +VVL G+LEMD CDFRG R R G+L ECL E+TTL+LEA + LLAVGIQGTI +TLN+TA GG VVW+V EVA EA+ W+IVPNVGILEEG +AT+A+TG L SD G T+A FKAES SG++ALAMVNTTFYYC +G+Y+ +D +CLLCSDL+L EGL+CDEPGVL+ TLPVA+GYWRSS+DTT IR+CL +EACEGG+ I SDDYCA+GYQGPYCAVC G+AGGIS+ CHECTEAFRA M LAV+GG+LA+A WLL R+L+Q+P FLSCR++R+ VS+ K+LPL+KLK PIVVFQILTQYA+IT V FP AF+K L F + +NLD+GW+LSASCI +P+FYGRL+L TL P+AL AL CTF++A+ R +GL KA+ +S +G MS +RQ+SV++RRH+ VLVT +FLVYSTVST VFQTFACDTLDEL TT+LRADYSL C T H YR YA +MILVYPIGIPL+YAWLLFRH HRIYPKQALRDGVSPERRL D KI+HTV+LWQAYRPSRYYYEVIECARRLLLTG LVFILP+SAGQAGVACVLSV TV +FITLRPF+D ND LY+LG +LIFLSMFVSLVPK+ IAD D+QS+T +SWLLIVLS+ LW MAF QCFLE R R+DS + SS NLMG+ FSRRSG +G N SP+D + T P DF+DF + + G S + H T+ G SGYADPV+ RF++G++G G XXXXXXXXXXXXXX SQ+SGNTYGPL A S DS TMAE MF RR+G G
Sbjct: 31 GGVALAEPLVVAAASSLWILGEPGADGSPAAIDGGGVTGLVDLGEGSSLRLEGVTLRNASRASGNGGAIRAEAEGCSVVAVDSSFEGNQAASSFYLEGRGGALALGGGGSAELDNCVVSGNHAQQSGGAFSTQGDXXXXXXXXXXXXXXXXXXXXXGVVLEGRSTVWLDGSTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLDNYYFGDRTF--GLGGGVKIIGSYATT---TISITDSLFEGNSATDGGGLYISSDYVLTVSRTVFHDNVAGFFGGGAVLESNGVAALSSSNFTGGFAWNXXXXXXXXXXRVSISDCLFEGNSNKFAGGAIRVEEEAAVSLSGTTFSNNFISSQSGAGSGGAVSVSAGTLTATDCNFENNQA-FHDDRYDVETDPLEGGGAVIISDGSNV--------------GGALLAEGSSTATLTNVAFTSNQAGVYGGALSIYEESVCLMNASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTNATVTGGLFSTNTATDTGGHVVAADAHTNVELLPD----------------------------AAAASGVGTTATPLVLSGGEAGTDGGAVHAYGGXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAYFVGTGTNFXXXXXXXXXXXXRAFTGADVVLEGCVVDGNTAQLGGGVSSVDASLAXXXXXXXXXXXFTDGGGLRASYLSKVVLDTXXXXXXXXXXXXXXVALDASSGTDNDNLNAANASSALDCRGG-TFEGNHAGERGGAVYVTRESVLSFEGCESFGNSASLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTQLVAWNASF-SVDDAPSMLAVEMTSGSSMRALACSFSGWEGPYVVLTGGELEMDLCDFRG---------------------------------------------------------------------------------------------RFGR---------------------------GVL---------------ECLGETTTLELEAPSYELLAVGIQGTISSTLNITAGIEGGPVVWKVEEVADVHPTEALTWSIVPNVGILEEGGSATVAITGSLTSDFNGPTQALFKAESRQSGNTALAMVNTTFYYCQQGEYF-SDDECLLCSDLELDGEGLDCDEPGVLQLTLPVASGYWRSSDDTTTIRKCLYEEACEGGSAISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAWMYVLAVLGGLLALACAWLLFRYLIQEPVSPGRFLSCRNSRM---VSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIALGLALCCTFMYAKSRTVRAGLPKANEGSSMRSVNTVVSXXXXXXXXXXXXXXPATVVAGSRSGHGIMMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYILGAILIFLSMFVSLVPKIEIADGDDQSETVVSWLLIVLSLTLWLMAFMQCFLEVRSINAASGSRWDSGDTSSIANLMGNGGFSRRSGGGAGEYKSDGTSSGYKNFSPEDHHNTGHPADFYDFTNAHFGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLHAWGTSPGGTADGRASGYADPVVLRFNDGMNGGDRGXXXXXXXXXXXXXXXXXXX--------XQSQSSGNTYGPLTA-------------------------------SMADSSTMAEDMFARRLGGG 1809
BLAST of mRNA_P-littoralis_Contig152.46.6 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE) HSP 1 Score: 1300 bits (3363), Expect = 0.000e+0 Identity = 1023/2126 (48.12%), Postives = 1209/2126 (56.87%), Query Frame = 3
Query: 852 AVSLPVDAAELAKSLAACTGGVYNVTWTGAVELAEPLVVAANSSVTITGAQGADGEAAALDGGGVTGLLDL-------------------------------------------------------GAGSSLRLESVILRNARRGAGNGGAIRAEAAGCSVAALGSTFEGNEAVSESG-EGSGGALALGAGATARLENCTLSGNHAKRNGGGVWSDG-VDSSLTLTDCQLKDNXXXXXXGVGMGSRSTAVFEGSTVLGNYAEFEGGGVYGVNATVVVAVGSEFVNNTMGLTGGGGISLHDESNLTISDSTFRRNYYAGNDSFSHASGGGVRVIGTSSPSRGATVSIVDSLFEDNYAPHGGGLWLSSVSLLTVARSVLHGNNASDFGGGASVESTEVAEFTACNFTESYAFNRAGGLELADSSVTISGCLFEGNSNRVEGGAISAEDNSVVTIKTCTFVNNFIVD--GAGSGGAITVSGATLRATNCSFENNLADLTGTLYDAGTDPLEGGGAVMLENFSNATFVACNFSSNVGAYGGAILAEEASAATLTGVVMTDNEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVELDGVAFVGNSAXXXXXXXX----------------------------------LFTSGSNATVQGGRFVSNNASTSGGHVLATGADTLVNLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSASVSASAAQQPLAFTGGRAGVNGGAVHASAGAVVTLTFAEMSGNQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVADAAFVGTSSSFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSFIDAKLVAGRCLVTDNTASADGGGLRVSYQTTAVMDEXXXXXXXXXXXXXXXAVDASSGTSDDALFAANASSSFTCQGGGTFEGNEAGERGGAVYVTRNSDVTLDSCNTSRNAASLGASVYASHSFVSLRAGSVLAYDQVPTGAMVYALKTQLTANNTRFLALEDCPSILAVQTTEGSYMKALGCSFSGWEGAFVVLAAGKLEMDSCDFRGSQADVLVAAMNASSPARIRNTAVGIENYPSLASASYSSSTEGGATTTVLAVNVMSCASDDPCGIDNSSSXXXXXXXXXXXXNGVVGAVLTE--GQRRSRRLETSSSIDKEGEGEEGAGFAERGCVDGILGVYCPCFIATITGEEECLEESTTLQLEAAADPLLAVGIQGTIETTLNVTAA--GGAVVWEVGEVAGPFSEEAVIWTIVPNVGILEEGATATIAVTGRLDSDLYGMTKAQFKAESLLSGDSALAMVNTTFYYCIEGQYYLNDGKCLLCSDLDLGVEGLNCDEPGVLRATLPVAAGYWRSSNDTTVIRECLNDEACEGGAVIQDSDDYCALGYQGPYCAVCSPGHAGGISSRCHECTEAFRAGMIFLAVVGGVLAVAFLWLLLRFLLQDPTGSRSFLSCRSNRVASIVSRAKQLPLYKLKTPIVVFQILTQYAEITNVGFPVAFSKFLTFWNAVNLDVGWMLSASCIIAPDFYGRLLLVTLAPMALAAALGCTFLFARRRVTTSGLSKAHSAAS-------------------------------NG----MSASRQLSVIRRRHMAVLVTGTFLVYSTVSTTVFQTFACDTLDELKTTYLRADYSLMCNTAAHTSYRIYASVMILVYPIGIPLMYAWLLFRHHHRIYPKQALRDGVSPERRLADPKISHTVVLWQAYRPSRYYYEVIECARRLLLTGALVFILPDSAGQAGVACVLSVLTVCIFITLRPFSDPNDSHLYVLGCLLIFLSMFVSLVPKVAIADEDEQSQTFLSWLLIVLSMILWGMAFAQCFLEARWPTRKDAGRFDSLEASSAVNLMGSDCFSRRS--GTGES----------NVSPKDRNLT--PPDFHDFPHGNSGASRKSSGNNNGNGNLESGGMRVVE-------------------------KGEYHNSVTAAAGQLHPSGYADPVMPRFDEGLHGSGAGWGNSXXXXXXXXXXXXXXMGADHAGLSNLSQTSGNTYGPLAAATVECGGGSSSRGSGSGGGNKFPPINLSDDDSAPDSPTMAEQMFLRRVGIG 6716
AVS DAA+LA ++ CTGG YNVTWTGAV L EPLVVAA SS+ I GA GADG AA+DGGGV G G LE V LRNA R +GNGGAIRAEA GCSV A+ S+FEGN+A S EG GGALALG G +A LENC +SGNHA+++GG + G XXXXXXGV + RST +GST+L GISL SNLT+SDS+F NYY G+ +F GGGV++IG+ + + T+SI DSLFE N A GGGL++SS LTV+R+V H N A FGGGA +ES VA ++CNFT +A+N + TF+NNFI GAGSGGAI+VS TL T+C+FENN A YD TDPLEGGGAV++ + SNATF+ CNF+ N GA G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ELDGVAFVGNS F+ G+NATV GG F SN A+ +GGHV+A A T V LL +A+ A A+ L +GG AG +GGAVHAS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VADA FVGT + XXXXXXXXXXX +S +DA L DGGGLR SY + V+D XXXXXXXXXXXXXX A+DASSGT +D L AANASS+ C+ G TFEGN AGERGGAVYVTR S + + C + N+ASLGA L TQL A N F ++ D PS+LAV+ T GSYMKAL CSFSGWEG +VVL G+LEMD CDFRGS V + + S A I T+ G VL+ + +S G+ ++ G +L + G R RR+ +++S EE F+ + CVDG LGVYCPCF+ATITGEEECL E+TTL+LEA + LLAVGIQGTI +TLN+TA GG VVW+V EVA S EA+ W+IVPNVGILEEG +AT +TG L SD G T A FKAES SG++ALAMVNTTFYYC+EG+Y+ ND +CLLCSDL+L EGL+CDEPGVL++TLPVA+GYWRSS DTT IR+CL +EAC+GG VI SDDYCA+GYQGPYCAVC G+AGGIS+ CHECTEAFRAGM LAV+GG+LA+A WLLLR+L+Q+P FLSC ++R+ VS+ K+LP++KLK PIVVFQILTQYA+IT V FP A++K L F + +NLD+GW+LSASCI +P+FYGRL+L TL P+ AL CTF++A+ R GL KA+ +S NG MS +RQ+SV++RRH+ VLVT +FLVYSTVST VFQ FACDTLDE T+LRADYSL C T H YR YA +MILVYPIGIPL+YAWLLF+H HRIYPKQALRDGVSPERRL D KI+HTV+LWQAYRPSRYYYEVIECARRLLLTG LVFILP+SAGQAGVACVLSV TV +FITLRPF+D ND HLY+LG +LIFLSMFVSLVPK+ IAD QCF + R R+DS + SS NLMG+ FSRRS G GE N SP+D + T P DF+DF +G+ G S K + A SGYADPV+ RF++G+ G XXXXXXXXXX SN SQ+SGNTYGPL A E S NKF IN +DD A DSPTMAE+MF RR+G G
Sbjct: 112 AVSSAADAADLAVAVGGCTGGAYNVTWTGAVTLEEPLVVAAASSLWILGAPGADGSPAAMDGGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGG----LEGVTLRNASRASGNGGAIRAEAEGCSVVAVDSSFEGNQAASIIYLEGRGGALALGGGGSAELENCVVSGNHAQQSGGAFSTQGDXXXXXXXXXXXXXXXXXXXXXGVVLEGRSTVWLDGSTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLGNYYFGDRTF--GIGGGVKIIGSYATT---TISIADSLFEGNSATDGGGLYISSDYALTVSRTVFHDNVAGFFGGGAVLESNGVAALSSCNFTGGFAWNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGS-TFLNNFISSQSGAGSGGAISVSAGTLIGTDCNFENNQA-FHDDRYDVETDPLEGGGAVIISDGSNATFLDCNFTLNGGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDGVAFVGNSVSGGRINIDTILVSAYKRPVPLNTLRLSRTNVLSPTNISGGAVFFSLGTNATVTGGLFSSNTATGAGGHVVAADAHTNVELLPD-----------------------------AAASGAETAETSLVLSGGEAGTDGGAVHASXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAYFVGTGTXXXXXXXXXXXXXXRAFTGADVVLEGCVVDGNTAKLGGGVSSVDASLXXXXXXXXXXXXXTDGGGLRASYLSKVVLDXXXXXXXXXXXXXXXVALDASSGTDNDVLSAANASSALDCRSG-TFEGNRAGERGGAVYVTRESVLAFEGCGSFGNSASLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTQLVAWNASF-SVADAPSMLAVEMTSGSYMKALACSFSGWEGPYVVLTGGELEMDLCDFRGSIGGVGSSGAVSGSAAAIVTTSGGSHR--------------------VLSQHRRVSSSG---GVHDAK-----------------GLLLRDDSGPGRPRRVLSTAS-------EEEGSFSNQDCVDGNLGVYCPCFVATITGEEECLGETTTLELEAPSYELLAVGIQGTISSTLNITAGREGGPVVWKVEEVAEVHSTEALTWSIVPNVGILEEGGSATAVITGSLTSDFNGPTHALFKAESRQSGNTALAMVNTTFYYCLEGEYF-NDEECLLCSDLELDGEGLDCDEPGVLQSTLPVASGYWRSSADTTTIRQCLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAGMYLLAVLGGLLAMACAWLLLRYLIQEPVSPGRFLSCGNSRM---VSKVKELPVHKLKIPIVVFQILTQYADITTVDFPPAYTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIVFGLALCCTFMYAKSRSVRVGLPKANEGSSIRSINTVVSXXXXXXXXXXXXAPATVFTGTRNGHGMIMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQAFACDTLDEQGKTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFQHRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDHLYILGAILIFLSMFVSLVPKLEIADGXXXXXXXXXXXXXXXXXXXXXXXVMQCFWKVRSIDAASGRRWDSGDTSSIANLMGNGGFSRRSSGGAGEDKSDDTSSGYKNFSPEDDHNTGHPADFYDFTNGHFGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRAWGTSPGGAADGRASGYADPVVLRFNDGMKGGDG---------XXXXXXXXXXXXXXXXXXSNQSQSSGNTYGPLTAGMGEETSSS----------NKFSAINYADDGVA-DSPTMAEEMFSRRLGGG 2123
BLAST of mRNA_P-littoralis_Contig152.46.6 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI) HSP 1 Score: 333 bits (853), Expect = 4.580e-88 Identity = 321/1179 (27.23%), Postives = 465/1179 (39.44%), Query Frame = 3
Query: 3411 GERGGAVYVTRNSDVTLDSCNTSRNAASLGASVYASHSFVSLRAGSVLAYDQVPTGAMVYALKTQLTANNTRFLALEDCPSILAVQTTEGSYMKALGCSFSGWEGAFVVLAAGKLEMDSCDFRGSQADVLVAAMNASSPARIRNTAVGIENYPSLASASYSSSTEGGATTT---VLAVNV-----MSCASDDPCGIDNSSSXXXXXXXXXXXXNGVVGAVLTEGQRRSRRLETSSSIDKEGEGEEGAGFAERGCVDGILGVYCPCF-----IATITGEEECLEESTTLQ----LEAAADPLLAVGIQGTIETTLN-------VTAAGGA-------------VVWEVGEVAGPFSEEAVIWTIVPNVGILEEGATATIAVTGRLDSDLYGMTKAQFKAESLL------------------------SGDSALAMVNTTFYYCIEGQYYLND--------GKCLLCSDLDLGVEGLNCDEPGVLRATLPVAAGYWRSSNDTTVIRECLNDEACEGGAVIQDSDDYCALGYQGPYCAVCSPGHAGGISSRCHECTEAFRAGMIFLAVVGGVLAVAFLWLLLRFLLQD------------------------------------------------PT-------------------GSRSFLSCRSNRVASIV----------------------------------------------SRAK----------------------------------------------------------------------------------------QLPLYKLKTPIVVFQILTQYAEITNVGFPVAFSKFLTFWNAVNLDVGWMLSASCIIAP-DFYGRLL----LVTLAPMALAAALGCTFLFAR---RRVTTSGLSKAHSAASNGMSASRQLSVIRRRHMAVLVTGTFLVYSTVSTTVFQTFACDTLDELKTTYLRADYSLMCNTAAHTSYRIYASVMILVYPIGIPLMYAWLLFRHHHRIYPK-------QALRDGVSPER---RLADPKISHTVVLWQAYRPSRYYYEVIECARRLLLTGALVFILPDSAGQAGVACVLSVLTVCIFITLRPFSDPNDSHLYVLGCLLIFLSMFVSLVPKVAIADEDEQSQTFLSWLLIVLSMILWGMAFAQCFLEARWPT 6083
G GGAVY + + C+ N+A G ++YA + + G L + V G++V+ + + LT T F E + AVQ E S KA SF G+ G VV + G L +D CDF GS A VLV + S+ +RN +G NY +A A+ +E G T +++VNV M +S PC +EG C+DG LGVYC C+ IA + E C+ L L AD + + G + TLN ++AGG+ V+W V + E + WT+ P+ G+L G + T+ V D G F+A+ + G++A A + +F +C G Y+ N C LC+D+D +G+NCDE G TLP+ +GYWR+S D+ IR+C N++AC+GG+++ +YC GY+GP CAVC+ G+ G+++ CH CT +F+ GM F+ V +L + LL +L+ PT GS FL R ++ + SRA +LPL KLK +VV+QI +AEIT V FP + KFL+ + D+GWM+SA+C+ A DFY +LL A A AAA AR RRV +G N L + RH +++ +LVY+ VST VFQ FAC+ E+ ++LRAD+ + C+T H +Y+IYA+VMI + + + L R RI P Q R V E+ R D I+ T LW AY P+RYYYEV EC RRLLLTG LVF++PD+ GQ CV + L++ F LRP +D D LY GCL+IF + F++L+ K +A D + S +LI+++++ FL W T
Sbjct: 554 GVDGGAVYAVEGAKLEWG-CDLVNNSALAGPAIYARDNAEVVLRGVELYDNVVARGSVVFIVSSNLTTYQTVFTDTEGSSDLSAVQADEDSSYKAEDTSFVGFAGEAVVFSEGILYLDDCDFSGSAASVLVYSERNSTTV-VRNAVLGDNNYFDVAEAA----SEAGDIPTAHSLISVNVTCDGWMPFSSTPPC---------------------------SEGSP---------------------------CIDGDLGVYCQCYTRESSIAEGSPSETCVTGDPGLLSLTVLSEPADAVYPTMLDGDLLLTLNDDETVTTSSSAGGSGVALSAGAGTEGGVIWNVSALVLSSEEGLMEWTVFPSTGLLLPGRSITLHVVTLPLDDFNGEATVSFQADGMSPPASLVAEAAAAVVVQTTSLADDGEGETAAASFDVSFVHCESGTYWNNSCDPEGDSVSCCELCTDVDGDEDGVNCDENGATTRTLPIQSGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFHFSASGGGSSGGHPTKGSSALKSVGEESDGGESGGSGRFLGAWGRRKSASIGAPPPGAITTSSAAGSGPSSSVNDKGAGSKADSAGTVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLQPSAAPAVRGPXXXXXXXXXXXXXXXXXXXXXXXXXAARIGEMLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLLRGKGASRTAMAAAAAAERARQGRARPSARRVWRNGPGDESDLEQN------HLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICI-------SFWYFLTRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLF--------FLSIFWNT 1651
BLAST of mRNA_P-littoralis_Contig152.46.6 vs. uniprot
Match: D8LRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF7_ECTSI) HSP 1 Score: 311 bits (797), Expect = 2.970e-87 Identity = 212/644 (32.92%), Postives = 321/644 (49.84%), Query Frame = 3
Query: 3426 AVYVTRNSDVTLDSCNTSRNAASLGASVYASHSFVSLRAGSVLAYDQVPTGAMVYALKTQLTANNTRFLALEDCPSILAVQTTEGSYMKALGCSFSGWEGAFVVLA--AGKLEMDSCDFRGSQADVLVAAMNASSPARIRNTAVGIENYPSLASASYSSSTEGGATTTVLAVNVMSCASDDPCGIDNSSSXXXXXXXXXXXXNGVVGAVLTEGQRRSRRLETSSSIDKEGEGEEGAGFAERGCVDGILGVYCPCFIATITGEEECLEESTTLQLEAAADPLLAVGIQGTIETTLNVT-----------------AAGGAVVWEVGEVAGPFSEEAVIWTIVPNVGILEEGATATIAVTGRLDSDLYGMTKAQFKAESLLSG--DSALAMVNTTFYYCIEGQYYL-NDGKCLLCSDLDLGVEGLNCDEPGVLRATLPVAAGYWRSSNDTTVIRECLNDEACEGGAV---IQDSDDYCALGYQGPYCAVCSPGHAGGISSRCHECTEAFRAGMIFLAVVGGVLAVAFLWLLLRFLLQDPTGSRSFLSCRSNRVASIVSRA-KQLPLYKLKTPIVVFQILTQYAEITNVGFPVAFSKFLTFWNAVNLDVGWMLSASCIIAPDFYGRLLLVTLAPMALAAALGCTFLF 5279
A+ +S + + CN++ N+A+LG S+Y S S + LR + D VPTGA+VY L ++ A ++ F + +LAVQ + +A C F GW G VVLA G L +D CDF S A +V + + A +RN +G NY ++ +Y + E P +NSS + + G L S D EG C++G LGVYC C+++ + CL S TL L D +++ T+L ++ GGA +WE+ + P S V W +VP+ G+ G TI++ G + + G + F AE+ D +N +F YC GQY++ ++ C++C+D+ L EGL+CD G L TLP+A GYWRS+ +T IREC ND+AC G V I +DYC GY GPYCAVC G+ G+S CH C ++ AGM+ + + GV+ V + ++L L+ +P L+ S S++SR + +P +KLK P VV QI+TQYA IT++ F F FL+ + +NLD+GW+L++ CII +FYG L+ T+ P+ + L T+L+
Sbjct: 84 AMRCDEDSMIEMQDCNSTSNSATLGGSIYMSRSELDLRK-CLFVGDTVPTGAIVYTLDAKVRARDSIFEDTTNNAGMLAVQAGSHTEFEAQDCYFIGWTGTNVVLADQTGVLHLDGCDFSESTASSMVNVQDGGTLAVVRNARLGTSNYQAI---NYGTDLE------------------TPLEAENSS--------VSIFGSNIAGCEL------------SGCSDNEG------------CIEGDLGVYCYCYVSVVDTTSTCLGSSGTLTL-TGPDSVVSTTYPDAPSTSLVLSWNDSEALGADSQDGAGEPGGGAGLWEIVWLDDPRS---VAWVVVPSTGLAYPGENITISLNGEVSTYWNGESTTVFTAEAPHQEEVDPFATSINASFVYCNAGQYWVASETSCMMCADVALNPEGLSCDSEGTLLETLPLAEGYWRSTETSTNIRECFNDDACIGSEVSQRISSPNDYCDTGYMGPYCAVCMDGYTTGVSHTCHSCDGSYWAGMVVVMALTGVVLVVGVVIVLNDLVGNPA-----LTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLY 664
BLAST of mRNA_P-littoralis_Contig152.46.6 vs. uniprot
Match: A0A835YUM0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM0_9STRA) HSP 1 Score: 323 bits (828), Expect = 2.370e-86 Identity = 212/581 (36.49%), Postives = 298/581 (51.29%), Query Frame = 3
Query: 4551 CIEGQYYLNDGKCLLCSDLDLGVEGLNCDEPGVLRATLPVAAGYWRSSNDTTVIRECLNDEACEGGAVIQDSDDYCALGYQGPYCAVCSPGHAGGISSRCHECTEAFRAGMIFLAVV------GGVLAVAFLWLLLRFLLQ-------DPTGSRSFLSCRSNRVASIVSRAKQLPLYKLKTPIVVFQILTQYAEITNVGFPVAFSKFLTFWNAVNLDVGWMLSASCIIAPDFYGRLLLVTLAPMALAAALGCTFLFARRRVT--TSGL-----------------SKAHSAAS-NGMSASRQLSVIRRRHMAVLVTGTFLVYSTVSTTVFQTFACDTLDELKTTYLRADYSLMCNTAAHTSYRIYASVMILVYPIGIPLMYAWLLFRHHHRIYPKQALRDGVSPERRLADPKISHTVVLWQAYRPSRYYYEVIECARRLLLTGALVFILPDSAGQAGVACVLSVLTVCIFITLRPFSDPNDSHLYVLGCLLIFLSMFVSLVPKVAIADEDEQSQTFLSWLLIVLSMILWGMAFAQCFLEARWPTRKDAGRFDSLEASSAVNLMGSDCFSRRSGTGESNVSP 6194
C+ G + + D +C+ C + +C + GV LP+ G WR + +R+C EAC GG+ DDYCA GY GPYCAVC+ H ++C C A I + V+ G+ +A L L L++ D TG + + V+ A L L L+ PIVV Q+LTQ+A +T FP + FL + N +LD+ LSA C + DFY RLL VT+AP+ AALG LF RR T GL S + S A A +L I RH +L+ TFL++S STTVFQTFACD LD YLRADY+L C TA H +Y IYAS M+LVYP+GIP +YA++L RH I + DG + + T LW Y+ + Y++E+IECARRLLL+G LVFI P + Q+ VAC L+++T+ ++ L P D D +YVLG ++IF SMF +L+ + +D++S +S LLI LS++L Q + R G+ + + + G CF R + ++ SP
Sbjct: 734 CLAGDF-IKDDQCVYCDP-----QLFDCSQIGVSAKALPLRPGLWRENLTQANVRQCWRAEACHGGSATDSPDDYCAEGYSGPYCAVCAADHTRTFGNKCVACDSGQAAAAISVFVILICAAAVGISYIAITSLRLDALIEVMDSATEDQTG-----------LLASVAAALGLALSHLRIPIVVVQVLTQFASVTGAPFPQLYRGFLRWLNLFSLDLSLFLSAGCYVRTDFYDRLLFVTIAPLVCVAALGAFHLFVCRRHQRRTGGLDGXXXXXXXXXXXXXXTSSSRSLAQWRSARARERLDDIVSRHATLLLAFTFLIFSFASTTVFQTFACDCLDGTGECYLRADYALSCGTARHRAYVIYASFMVLVYPVGIPALYAYMLRRHRKGIARHE---DGG-----VVAASLKPTKFLWTPYKKTVYFWELIECARRLLLSGFLVFIFPGTPAQSAVACTLALITIVVYGELAPHKDSTDHRVYVLGSIIIFFSMFSALLVQGDYVAQDDRSAQVISVLLIALSVLLLAACALQIAVVVGGVVRSTRGKLGA-HGTFCRRMCGKWCFDRATDADVNDGSP 1288
BLAST of mRNA_P-littoralis_Contig152.46.6 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 327 bits (838), Expect = 4.250e-86 Identity = 186/492 (37.80%), Postives = 286/492 (58.13%), Query Frame = 3
Query: 4620 EGLNCDEPGVLRATLPVAAGYWRSSNDTTVIRECLNDEACEGGAVIQDSDDYCALGYQGPYCAVCSPGHAGGISSRCHECT-EAFRAGMIFLAVVGGVLAVAFLWLLLRFLL---------QDPTGSRSFLSCRSNRVASIVSRAKQLPLYKLKTPIVVFQILTQYAEITNVGFPVAFSKFLTFWNAVNLDVGWMLSASCIIAPDFYGRLLLVTLAPMALAAALGCTFLFARRRVTTSGLSKAHSAASNGMSASRQLSVIRRRHMAVLVTGTFLVYSTVSTTVFQTFACDTLDELKTTYLRADYSLMCNTAAHTSYRIYASVMILVYPIGIPLMYAWLLFRHHHRIYPKQALRDGVSPERRLADPKISHTVVLWQAYRPSRYYYEVIECARRLLLTGALVFILPDSAGQAGVACVLSVLTVCIFITLRPFSDPNDSHLYVLGCLLIFLSMFVSLVPKVAIADEDEQSQTFLSWLLIVLSMILWGMAFAQCFL 6065
EG G ATL + G++RSS +T IREC + +ACEGG+ + YCA GY GPYCAVCS G++ G S C C ++ ++ ++F A +G + A + L+ R + Q G R S RV V PL +K +VV+QI+TQY+++ V +P A+ FL+ + VNLD+G++LS +C+ +FY RLL+ T+ P+ + LGCT+L ARRR + ++RRH++V + F++Y+ VS T+F+TF CDTLD+ +YLRADYSL C+T HT+YR+YA + +LVYP+GIP ++ W LF++ H + KQ R+ + R AD LW+ Y+PS YYYEV+EC RR+ LTG VFI PDS+ Q + +L+ + + + L PF+ P + LY G ++F SM+++L+ +V ++DE +QSQ S ++++ + ++ + AQ L
Sbjct: 577 EGSRTTRRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAV---GTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTV------PLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRR---------------NRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDD-GNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHEL--KQEDRESQAELRPAAD--------LWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLL 1033
BLAST of mRNA_P-littoralis_Contig152.46.6 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 322 bits (826), Expect = 7.230e-85 Identity = 182/470 (38.72%), Postives = 271/470 (57.66%), Query Frame = 3
Query: 4620 EGLNCDEPGVLRATLPVAAGYWRSSNDTTVIRECLNDEACEGGAVIQDSDDYCALGYQGPYCAVCSPGHAGGISSRCHECTEAFRAGMIFLAVVGGVL---AVAFLWLLLRFLLQDPTGSRSFLSCRSNRVASIVSRAKQLPLYKLKTPIVVFQILTQYAEITNVGFPVAFSKFLTFWNAVNLDVGWMLSASCIIAPDFYGRLLLVTLAPMALAAALGCTFLFARRRVTTSGLSKAHSAASNGMSASRQLSVIRRRHMAVLVTGTFLVYSTVSTTVFQTFACDTLDELKTTYLRADYSLMCNTAAHTSYRIYASVMILVYPIGIPLMYAWLLFRHHHRIYPKQALRDGVSPERRLADPKISHTVVLWQAYRPSRYYYEVIECARRLLLTGALVFILPDSAGQAGVACVLSVLTVCIFITLRPFSDPNDSHLYVLGCLLIFLSMFVSLVPKVAIADEDEQSQTFLSWLLIV 6020
EG G ATL + GY+RSS +T IREC ++ACEGG V+ +YCA GY GPYCAVC+ G + G C C R ++ GVL AV F+ L +++ S++ + R K LPL +K +VV+QI+TQY+++ V +P A+ FL+ + VNLD+G++LS +C+ DFY RLLL T+ P + LGCT+L + V++ RH++V + F++Y+TVS T+F+TF CD LD+ +YLR+DYSL C+T HT+YR+YA +MILVYP+GIP ++ W LF+H H + KQ R+ + + AD LW+ Y+PS YYYEV+EC RR+ LTG VFI PDS+ Q + +L+++ + + L PF+ P + LY G ++F SM+++L+ +V ++DE QSQ S +L++
Sbjct: 583 EGAQTTSRGGTLATLEILPGYYRSSATSTDIRECFYEDACEGGKVV---GEYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYL--------------------------AMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDD-GNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHEL--KQEGRERRAVLKPAAD--------LWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVI 1012
BLAST of mRNA_P-littoralis_Contig152.46.6 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 322 bits (824), Expect = 1.790e-84 Identity = 195/547 (35.65%), Postives = 311/547 (56.86%), Query Frame = 3
Query: 4620 EGLNCDEPGVLRATLPVAAGYWRSSNDTTVIRECLNDEACEGGAVIQDSDDYCALGYQGPYCAVCSPGHAGGISSRCHECT-EAFRAGMIFLAVVGGVLAVAFLWLLLRFLLQDPTGSRSFLSCRS-------NRVASIVSRAKQ-LPLYKLKTPIVVFQILTQYAEITNVGFPVAFSKFLTFWNAVNLDVGWMLSASCIIAPDFYGRLLLVTLAPMALAAALGCTFLFARRRVTTSGLSKAHSAASNGMSASRQLSVIRRRHMAVLVTGTFLVYSTVSTTVFQTFACDTLDELKTTYLRADYSLMCNTAAHTSYRIYASVMILVYPIGIPLMYAWLLFRHHHRIYPKQALRDGVSPERRLADPKISHTVVLWQAYRPSRYYYEVIECARRLLLTGALVFILPDSAGQAGVACVLSVLTVCIFITLRPFSDPNDSHLYVLGCLLIFLSMFVSLVPKVAIADEDEQSQTFLSWLLIVLSMILWGMAFAQCFLE-ARWPTRKDA-----GRFDSLEASSA-----VNLMGSDCFSRRSGTGE--SNVSP 6194
EG G ATL V G++RSS +T IREC + +AC+GG+ I YC+ GY GPYCAVC+ G++ G S C C + ++ ++F A +G + A + L+ R + G R +++ +R +Q +PL +K +VV+QI+TQY+++ + +P A+ FL+ + VNLD+G++LS +C+ +FY RLL+ T+ P+ + LGCT++ ARRR + ++RRH++V + F++Y+ VS T+F+TF CDTLD+ +YLRADYSL C+T HT+YR+YA + +LVYP+GIP ++ W LF++ H + KQ R+G + R AD LW+ Y+PS YYYEV+EC RR+ LTG VFI PDS+ Q + +L+ + + + L PF+ P + LY G ++F SM+++L+ +V ++DE +QSQ S ++++ + ++ + Q L W DA GR ++ A++A V+ G F R G+ + SN +P
Sbjct: 553 EGSRTTRRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAI---GTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRR---------------NRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDD-GNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHEL--KQEDREGQAELRPAAD--------LWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLLIFVGWDGLVDAPDVLVGREVAVSAATADANDNVDFWGVAGFGSRGGSTDDGSNENP 1070
BLAST of mRNA_P-littoralis_Contig152.46.6 vs. uniprot
Match: A0A835ZLE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE8_9STRA) HSP 1 Score: 310 bits (793), Expect = 2.090e-83 Identity = 188/483 (38.92%), Postives = 270/483 (55.90%), Query Frame = 3
Query: 4623 GLNCDEPGVLRATLPVAAGYWRSSNDTTVIRECLNDEACEGGAVIQDSDDYCALGYQGPYCAVCSPGHAGGISSRCHECTEAFRAGMIFLAVVGGVLAVAFLWLLLRFL--LQDPTGSRSFLSCRSNRVASIVSRAKQLPLYKLKTPIVVFQILTQYAEITNVGFPVAFSKFLTFWNAVNLDVGWMLSASCIIAPDFYGRLLLVTLAPMALAAALGCTFLFARRRVTTSGLSKAHSAASNGMSASRQLSVIRRRHMAVLVTGTFLVYSTVSTTVFQTFACDTLDELKTTYLRADYSLMCNTAAHTSYRIYASVMILVYPIGIPLMYAWLLFRHHHRIYPKQALRDGVSPERRLADPKISHTVVLWQAYRPSRYYYEVIECARRLLLTGALVFILPDSAGQAGVACVLSVLTVCIFITLRPFSDPNDSHLYVLGCLLIFLSMFVSLVPKVAIADEDEQSQTFLSWLLIVLSMILWGMAFAQCFL 6065
GL C GV TL + G+WR + V+R+C N AC GGA D+YCA GY+GPYCAVCS + + RC ECT A + V V AV LW+L+R + + G RS RVA IV + +L+ PIVV Q+LTQY IT P+++++FL + V+LD+ W+ S C + DFYGRLL+ TL P+A+ A + L+ R + + A + V + R+ A+ T FL+++ VS TVFQTFACD L + +YLRADYS+ C T HT+YRI+A VM+L+YPIGIP +Y L+R G + + LW+ YR +++EV+EC RRL+LTG LVFI+P + GQ+ VACV + T ++ ++RP + +D LY LG +IF++ F+SL+ +V+ DE QS+ + LLI L+++L +A Q L
Sbjct: 548 GLVCTGVGVTSTTLTLDNGFWRETLTQEVVRQCWNSAACSGGAAAASVDEYCAAGYKGPYCAVCSDNYGALVGYRCVECTNTAVAIAFVVMAVVAVTAVFLLWVLVRAVGGASENAGGAKPTDIRS-RVARIVLELMR----RLRVPIVVLQVLTQYVSITGASLPLSYTEFLNSMSLVSLDLRWVTSPGCAMKVDFYGRLLMATLTPLAVIALIFVPRLYLIARARSERTPRQPHALLQRL-------VEKDRNAALAFT--FLIFAGVSVTVFQTFACDELMYISKSYLRADYSIECYTPEHTAYRIFAGVMVLIYPIGIPALYMSTLWRCF-----------GAHRDHGRTSELAKASSFLWEPYRAHAFHWEVVECLRRLMLTGLLVFIMPGTPGQSAVACVFAFFTGFVYESVRPHGERSDMWLYKLGYSIIFVTYFLSLLMQVSYTDE--QSEAIIGNLLIALNVLLLVLALGQAIL 1003
BLAST of mRNA_P-littoralis_Contig152.46.6 vs. uniprot
Match: A0A835YLB8_9STRA (Pectin lyase fold/virulence factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB8_9STRA) HSP 1 Score: 308 bits (788), Expect = 2.520e-83 Identity = 203/604 (33.61%), Postives = 313/604 (51.82%), Query Frame = 3
Query: 4401 GILEEGATATIAVTGRLDSDLYGMTKAQ------FKAESLLSGDSALAMVNTTFYYCIEGQYYLNDGKCLLCSDLDLGVEGLNCDEPGVLRATLPVAAGYWRSSNDT--TVIRECLNDEACEGGAVIQDSDDYCALGYQGPYCAVCSPGHAGGISSRCHECTEAFRAGMIFLAVVGGVLAVAFLWLL--LRFLLQDPTGSRSFLSCRSNR-------VASI--------VSRAKQLPLYKLKTPIVVFQILTQYAEITNVGFPVAFSKFLTFWNAVNLDVGWMLSASCIIAPDFYGRLLLVTLAPMALAAALGCTFLFARRRVTTSGLSKAHSAASNGMSASRQLSVIRRRHMAVLVTGTFLVYSTVSTTVFQTFACDTLDELK-TTYLRADYSLMCNTAAHTSYRIYASVMILVYPIGIPLMYAWLLFRHHHRIYPKQALRDGVSPERRLADP-KISHTVVLWQAYRPSRYYYEVIECARRLLLTGALVFILPDSAGQAGVACVLSVLTVCIFITLRPFSDPNDSHLYVLGCLLIFLSMFVSLVPKVAIADEDEQSQTFLSWLLIVLSMILWGMAFAQCFLEARWPTRKDAGRFDSLEASSAV 6131
GIL++GA T+ V+ D + A + + L +G + ++T+ Y+ CL C + + C EPG+ ATLP+ GYWR+S + I C N++AC GGA +DDYC GY+GPYCAVC G+ + S C++C ++ AV ++ VA + + L + GS S + +R AS+ V A L ++ PIVV QILTQY IT V P + F+++ + +NLD+ +LS C+ +FY +LLL T+ P+ + A LG ++ A R SG R + + ++++ TFL++S ST +FQTFACD + +LRADY++ C+TA + +YRIYA++M+LVYP+GIP +Y L+ I DG E +AD ++ LWQ YR +Y+EV+EC RRLLL+G LVFILP S GQ+ AC+ + ++ +++ P + D+ LY LG ++FL+MFV+LV + D DE+ +S +LI L+++L G A AQ + R+ TR + R + S +
Sbjct: 305 GILQKGADFTLTVS---DDATFSENTAGCCFIGGYGSRELATGGGSCVDIDTS-----ATSTYIEGNLCLTCDP-----DRVECLEPGITTATLPLLPGYWRASLEVGQADILRCWNEKACRGGAAKLSTDDYCDDGYEGPYCAVCRAGYTSFVGSTCYKCQS---GAVVSFAVFSTLVVVAMIVVCGALAAMGAHRPGSVSEVYKEGSRNTGVADATASVYLGLTSTNVKGAVMSVLRAMRIPIVVMQILTQYLSITGVPIPALYRTFISWLDLINLDMSVVLSPGCVFDVNFYQKLLLSTITPLCILALLGLAYVVASRHANRSG-----------RWGQRIYHLFVDKAGLLVLSFTFLIFSATSTVIFQTFACDAIPGFNGKRFLRADYAIECDTATYDAYRIYAAIMVLVYPVGIPALYMAALWWQRSAIKEVPEAADGEDAE--VADNVHLASLGFLWQPYRRQFWYWEVVECGRRLLLSGGLVFILPGSFGQSVYACIFAYFSILVYLRCGPHNCKLDATLYSLGATILFLTMFVALVAQYGSLDVDEKDANIISVMLIALNLVLLGTALAQACVVGRYITRASSKRTPPADTDSEL 879 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig152.46.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig152.46.6 >prot_P-littoralis_Contig152.46.6 ID=prot_P-littoralis_Contig152.46.6|Name=mRNA_P-littoralis_Contig152.46.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2556bp MAMQQCKLPLVPAGGTAADCERTGMAAVGGGSSTCRSSGSIDRNCGCGGVback to top mRNA from alignment at P-littoralis_Contig152:174424..213342- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig152.46.6 ID=mRNA_P-littoralis_Contig152.46.6|Name=mRNA_P-littoralis_Contig152.46.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=38919bp|location=Sequence derived from alignment at P-littoralis_Contig152:174424..213342- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig152:174424..213342- >mRNA_P-littoralis_Contig152.46.6 ID=mRNA_P-littoralis_Contig152.46.6|Name=mRNA_P-littoralis_Contig152.46.6|organism=Pylaiella littoralis U1_48|type=CDS|length=7668bp|location=Sequence derived from alignment at P-littoralis_Contig152:174424..213342- (Pylaiella littoralis U1_48)back to top |