prot_P-littoralis_Contig152.39.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig152.39.1
Unique Nameprot_P-littoralis_Contig152.39.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length347
Homology
BLAST of mRNA_P-littoralis_Contig152.39.1 vs. uniprot
Match: D8LRG1_ECTSI (HNH endonuclease family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG1_ECTSI)

HSP 1 Score: 465 bits (1197), Expect = 3.000e-162
Identity = 239/339 (70.50%), Postives = 277/339 (81.71%), Query Frame = 0
Query:    1 MVHPKRTRTS-----SWFLGACVVSSAVHGGAGYLIPATSFFSAADRSERCPRQDDSFRGNRIAAVPRAAAALWRVAPQQARRQEKSITMKQKQARKKTTRVRLRRAGPRTDVEGYSHSAFLKMRDEVALQVATTKQGTRRSRKINFSGGLDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSDPPFTRRNLFLRDSHRCQYCMKYFPPHNLSFDHVVPKKLGGKGAWDNVVTACGRCNNRKSDCHPRDLRSIGMTLAKYPRTPSFSELQSKARRYPPSEIHETWEDYLYFESEIVEDD 334
            M H KR R +     +WFLGACV+++A  G + +   A S +SA+  S R  + D + RG  +        A   VAP  A R E  ++MK K+A KK   VR RR+GP  +VEGYSH+AF+KM++EVALQVAT K+G+RR+R +NF+GG+DSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRS+RSPSVVVQLPSVIALKEFVNNHR+ PPFTRRNLFLRDSH+CQYC KYF PHNLSFDHVVPKKLGGKG WDNVVTACGRCNNRKSDCHPRDL+SIGM+LAKYP TP+FS+LQ+KARRYPP EIHETW DYLYFESEI+E++
Sbjct:    1 MAHRKRARNNGARAKTWFLGACVMNAAAQGASAF---AFSSYSASSFSLR-GQADPASRGTVL--------AKQAVAP--AGRAENLLSMKIKKAGKKP--VRSRRSGPPANVEGYSHAAFVKMKNEVALQVATNKKGSRRTRTVNFNGGIDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSVRSPSVVVQLPSVIALKEFVNNHRTHPPFTRRNLFLRDSHQCQYCQKYFAPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLKSIGMSLAKYPVTPTFSQLQAKARRYPPLEIHETWGDYLYFESEILEEE 323          
BLAST of mRNA_P-littoralis_Contig152.39.1 vs. uniprot
Match: A0A836CK35_9STRA (HNH endonuclease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK35_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.850e-79
Identity = 118/185 (63.78%), Postives = 144/185 (77.84%), Query Frame = 0
Query:  146 LDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSDPPFTRRNLFLRDSHRCQYCMKYFPPHNLSFDHVVPKKLGGKGAWDNVVTACGRCNNRKSDCHPRDLRSIGMTLAKYPRTPSFSELQSKARRYPPSEIHETWEDYLYFESEI 330
            L+SCP LVLNADYQPLSYLPLSLW WQ+ IKAV+ ++VVVLAT+ DR +RS +V ++LPSVIALK +VN H   P FTRRNL+LRD ++C YC K F   +LSFDHV P+KLGG  +W NVVT+C RCNN K DCHP+ L  IGM L K P  P+F ELQ++ARRYPP  IH+TW +YLY++S I
Sbjct:   78 LESCPALVLNADYQPLSYLPLSLWPWQEAIKAVWMDRVVVLATH-DRYVRSANVELKLPSVIALKGYVNQHAKVPSFTRRNLYLRDGYQCAYCSKQFQAGDLSFDHVTPRKLGGPTSWTNVVTSCHRCNNAKGDCHPKSLSRIGMRLNKAPHIPTFYELQNQARRYPPKLIHKTWAEYLYYDSAI 261          
BLAST of mRNA_P-littoralis_Contig152.39.1 vs. uniprot
Match: A0A7S2S5X4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5X4_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.790e-70
Identity = 107/198 (54.04%), Postives = 143/198 (72.22%), Query Frame = 0
Query:  127 VATTKQGTRRSRKINFSGGLDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSDPPFTRRNLFLRDSHRCQYCMKYFPPHNLSFDHVVPKKLGGKGAWDNVVTACGRCNNRKSDCHPRDLRSIGMTLAKYPRTPSFSELQSKARRYPPSEIHETWEDYL 324
            V+T  +     + +N+   L+ CP LVLNAD+QPLSY+PLS+W WQD IKAVF+E+VVV+A Y +  +RS SV VQ+PSVIALK++V   R+ P FTRRN+FLRDS+ CQYC       +L+FDHV+P+  GG  +W+NVVTAC RCNN+K D  P+ L  +G++L + PR PS  ELQ+ AR++PP  +H TW DYL
Sbjct:  190 VSTILEECMVKKSVNYFNNLEQCPVLVLNADFQPLSYIPLSIWSWQDAIKAVFAERVVVVANY-EHEVRSASVAVQVPSVIALKQYVPQARATPTFTRRNVFLRDSYCCQYCGTCAQTQHLTFDHVLPRSKGGDTSWNNVVTACHRCNNKKKDMMPQQLHHLGLSLLREPRVPSHYELQAAARKFPPKVMHHTWRDYL 386          
BLAST of mRNA_P-littoralis_Contig152.39.1 vs. uniprot
Match: A0A2E4F2L9_9PROT (HNH endonuclease n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4F2L9_9PROT)

HSP 1 Score: 214 bits (544), Expect = 1.980e-65
Identity = 100/185 (54.05%), Postives = 135/185 (72.97%), Query Frame = 0
Query:  146 LDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSDPPFTRRNLFLRDSHRCQYCMKYFPPHNLSFDHVVPKKLGGKGAWDNVVTACGRCNNRKSDCHPRDLRSIGMTLAKYPRTPSFSELQSKARRYPPSEIHETWEDYLYFESEI 330
            +D+CP LVLNADY+PLSY PLSLW WQ+ +KAVF ++V ++A Y ++ +RSPS  ++LPSVI+LK +V ++R  P FTR N+FLRD   CQYC KYF  H+L+FDHV+PK  GG   W NV+TAC  CN RK +   R +  +GM L   PR P+  ELQ+  RRYPP+ +HE+W D+LY++SE+
Sbjct:    3 VDTCPALVLNADYRPLSYFPLSLWSWQETVKAVFLDRVHIVAEY-EQEVRSPSWQMRLPSVISLKRYVQSNRR-PAFTRFNVFLRDGFTCQYCRKYFDTHDLTFDHVLPKSRGGFTNWTNVITACASCNLRKGN---RLMAEVGMHLVYMPRVPTVYELQNVGRRYPPNYLHESWSDFLYWDSEL 182          
BLAST of mRNA_P-littoralis_Contig152.39.1 vs. uniprot
Match: UPI001B298D4B (HNH endonuclease n=1 Tax=Rhodospirillales bacterium TMPK1 TaxID=2812848 RepID=UPI001B298D4B)

HSP 1 Score: 213 bits (541), Expect = 8.830e-65
Identity = 103/191 (53.93%), Postives = 134/191 (70.16%), Query Frame = 0
Query:  140 INFSGGLDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSDPPFTRRNLFLRDSHRCQYCMKYFPPHNLSFDHVVPKKLGGKGAWDNVVTACGRCNNRKSDCHPRDLRSIGMTLAKYPRTPSFSELQSKARRYPPSEIHETWEDYLYFESEI 330
            +  S  LDSCP LVLNAD++PLSY PLSLW WQD +KAVF ++V +L+ Y D+++RSP+  ++LPSVI+LKE+V   R  P FTR N+FLRDS  CQYC   FP H L+FDHV+P+  GG+  WDNV+TAC  CN RK D   +  R  GM     P  PS  ELQ   R++PP+ +HE+W DYLY++SE+
Sbjct:   12 LRLSPPLDSCPALVLNADFRPLSYFPLSLWSWQDTVKAVFLDRVNILSHY-DQTVRSPNFEMRLPSVISLKEYVQATRR-PAFTRFNVFLRDSFTCQYCGTGFPTHELTFDHVIPRSRGGRTTWDNVLTACSACNLRKGD---KLCRECGMHPRLEPFQPSAFELQENGRQFPPNFLHESWRDYLYWDSEL 197          
BLAST of mRNA_P-littoralis_Contig152.39.1 vs. uniprot
Match: UPI00167299FA (HNH endonuclease n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI00167299FA)

HSP 1 Score: 212 bits (539), Expect = 1.820e-64
Identity = 103/190 (54.21%), Postives = 135/190 (71.05%), Query Frame = 0
Query:  145 GLDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSDPPFTRRNLFLRDSHRCQYCMKYFPPHNLSFDHVVPKKLGGKGAWDNVVTACGRCNNRKSDCHPRDLRSIGMTLAKYPRTPSFSELQSKARRYPPSEIHETWEDYLYFESEIVEDD 334
            G D+ P LVLNAD++PLSY PLSLW WQD +KAVF ++V +++ Y D  +RSPS  ++LPSVIALKE+V+  R  P FTR N+FLRD   CQYC   FP H L+FDHVVP+  GG+ +W+NVVTACG CN RK +  PR   +IGM     PR P+  +LQ   R +PP+ +HE+W DYLY++ E+ +DD
Sbjct:    3 GPDNAPALVLNADFRPLSYFPLSLWSWQDAVKAVFLDRVNIVSHY-DTVVRSPSFEMKLPSVIALKEYVHQSRK-PAFTRFNVFLRDRFACQYCGDRFPTHELTFDHVVPRSRGGRTSWENVVTACGACNLRKGNHMPR---AIGMVPQVTPRQPTAYDLQDAGRGFPPNYLHESWRDYLYWDIELEQDD 187          
BLAST of mRNA_P-littoralis_Contig152.39.1 vs. uniprot
Match: A0A6M8VNA4_9PROT (HNH endonuclease n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VNA4_9PROT)

HSP 1 Score: 211 bits (536), Expect = 3.270e-64
Identity = 101/185 (54.59%), Postives = 131/185 (70.81%), Query Frame = 0
Query:  146 LDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSDPPFTRRNLFLRDSHRCQYCMKYFPPHNLSFDHVVPKKLGGKGAWDNVVTACGRCNNRKSDCHPRDLRSIGMTLAKYPRTPSFSELQSKARRYPPSEIHETWEDYLYFESEI 330
            LD+CP LVLNAD++PLSY PLSLW WQ+ +KAVF ++V +L+ Y DRS+ SPS  ++LPSVIALKE+V  H   P FTR N+FLRD  +CQYC + F  H L+FDHV+P+  GG   W+N+V AC  CN RKSD  PR+     M   + P TPS  ELQ   R +PP+ +HE+W DYLY++SE+
Sbjct:    5 LDNCPTLVLNADFRPLSYFPLSLWSWQEAVKAVFMDRVHILSEY-DRSVHSPSFEMRLPSVIALKEYVMPHHK-PAFTRFNVFLRDMWQCQYCGETFKTHELTFDHVIPRSRGGDTTWENIVAACNDCNVRKSDKLPRECH---MHPLRNPTTPSIYELQENGRAFPPNFLHESWGDYLYWDSEL 184          
BLAST of mRNA_P-littoralis_Contig152.39.1 vs. uniprot
Match: A0A6I7P8K3_9PROT (HNH endonuclease n=1 Tax=Geminicoccaceae bacterium TaxID=2448052 RepID=A0A6I7P8K3_9PROT)

HSP 1 Score: 210 bits (534), Expect = 8.230e-64
Identity = 102/185 (55.14%), Postives = 132/185 (71.35%), Query Frame = 0
Query:  146 LDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSDPPFTRRNLFLRDSHRCQYCMKYFPPHNLSFDHVVPKKLGGKGAWDNVVTACGRCNNRKSDCHPRDLRSIGMTLAKYPRTPSFSELQSKARRYPPSEIHETWEDYLYFESEI 330
            LD+CP LVLNADYQPLSY PLSLWGWQD +KA+F ++V V++ Y DR IRSPS  ++LPSV+ALKE+V      PPFTR NLFLRD   CQYC   F   +L+FDHVVP+  GG+ +WDN+VTAC RCN +K +  P +    GM     PR P+  ELQ   R +PP+ +HE+W D+LY+++E+
Sbjct:   12 LDACPALVLNADYQPLSYFPLSLWGWQDAVKAMFLDRVAVVSYY-DREIRSPSFRLRLPSVVALKEYVQQSHY-PPFTRFNLFLRDRFGCQYCGTRFRAEDLTFDHVVPRSRGGQTSWDNIVTACTRCNLQKGNKLPAEC---GMPPRTKPRRPTNYELQRAGRAFPPNYLHESWRDFLYWDTEL 191          
BLAST of mRNA_P-littoralis_Contig152.39.1 vs. uniprot
Match: A0A7W6WA90_9PROT (5-methylcytosine-specific restriction endonuclease McrA n=2 Tax=Roseospira visakhapatnamensis TaxID=390880 RepID=A0A7W6WA90_9PROT)

HSP 1 Score: 209 bits (533), Expect = 9.570e-64
Identity = 103/189 (54.50%), Postives = 131/189 (69.31%), Query Frame = 0
Query:  142 FSGGLDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSDPPFTRRNLFLRDSHRCQYCMKYFPPHNLSFDHVVPKKLGGKGAWDNVVTACGRCNNRKSDCHPRDLRSIGMTLAKYPRTPSFSELQSKARRYPPSEIHETWEDYLYFESEI 330
              GG    P LVLNADY+PLSY PLSLW WQD +K+VF ++V V+  Y D  IRSPS+ V+LPSVI+LKEFV+  R  P FTR N+FLRD   CQYC + FP H L+FDHVVP+  GG+  W+NVVTAC  CN RKS+  P+   +  M L + PR P+   LQ   R +PP+ +HE+W DYLY++SE+
Sbjct:    1 MEGGPPHAPALVLNADYRPLSYFPLSLWPWQDAVKSVFLDRVHVVCEY-DTVIRSPSLEVRLPSVISLKEFVSTARM-PAFTRFNVFLRDRFTCQYCGRRFPTHELTFDHVVPRSWGGRTTWENVVTACAACNLRKSNRTPK---TASMPLMREPRVPTHHALQDVGRAFPPNFLHESWRDYLYWDSEL 184          
BLAST of mRNA_P-littoralis_Contig152.39.1 vs. uniprot
Match: A0A7S3AAW0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAW0_9RHOD)

HSP 1 Score: 212 bits (539), Expect = 1.510e-63
Identity = 99/195 (50.77%), Postives = 135/195 (69.23%), Query Frame = 0
Query:  132 QGTRRSRKINFSGGLDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSDPPFTRRNLFLRDSHRCQYCMKYFPPHNLSFDHVVPKKLGGKGAWDNVVTACGRCNNRKSDCHPRDLRSIGMTLAKYPRTPSFSELQSKARRYPPSEIHETWEDYLYF 326
            + T   +  N    LD CP LVLN++YQPLSY+PLSLW WQ+V+KAV+ ++VV+LATY D  +RSPSV ++LPSVIALK + +     P FTR N+F+RD+  CQYC +  P  +L+FDHV+P+  GG   W+NVVTAC  CN +K    P+ ++   + L K P  PS+++LQS AR+Y P  IH TWEDY+Y+
Sbjct:   73 EATTAVQDPNTGSRLDQCPALVLNSNYQPLSYVPLSLWPWQEVVKAVYLDRVVILATY-DIQVRSPSVSLELPSVIALKRYQSLGGKRPAFTRYNVFIRDNFTCQYCRQKLPDRDLTFDHVIPRSRGGTSGWENVVTACVDCNYKKG---PKLIKETDLKLRKVPVEPSYAQLQSMARKYRPKHIHPTWEDYVYW 263          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig152.39.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRG1_ECTSI3.000e-16270.50HNH endonuclease family protein n=1 Tax=Ectocarpus... [more]
A0A836CK35_9STRA1.850e-7963.78HNH endonuclease family protein n=1 Tax=Tribonema ... [more]
A0A7S2S5X4_9STRA1.790e-7054.04Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A2E4F2L9_9PROT1.980e-6554.05HNH endonuclease n=1 Tax=Rhodospirillaceae bacteri... [more]
UPI001B298D4B8.830e-6553.93HNH endonuclease n=1 Tax=Rhodospirillales bacteriu... [more]
UPI00167299FA1.820e-6454.21HNH endonuclease n=1 Tax=Thalassobaculum fulvum Ta... [more]
A0A6M8VNA4_9PROT3.270e-6454.59HNH endonuclease n=1 Tax=Proteobacteria bacterium ... [more]
A0A6I7P8K3_9PROT8.230e-6455.14HNH endonuclease n=1 Tax=Geminicoccaceae bacterium... [more]
A0A7W6WA90_9PROT9.570e-6454.505-methylcytosine-specific restriction endonuclease... [more]
A0A7S3AAW0_9RHOD1.510e-6350.77Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003615HNH nucleaseSMARTSM00507HNH_5coord: 222..275
e-value: 2.6E-9
score: 46.9
IPR003615HNH nucleaseCDDcd00085HNHccoord: 221..278
e-value: 1.00414E-11
score: 57.4815
IPR029471HNH endonuclease 5PFAMPF14279HNH_5coord: 235..285
e-value: 7.6E-15
score: 54.6
NoneNo IPR availableGENE3D1.10.30.50coord: 210..298
e-value: 3.3E-19
score: 70.5
NoneNo IPR availablePANTHERPTHR33877:SF2SLL1193 PROTEINcoord: 95..325
NoneNo IPR availablePANTHERPTHR33877SLL1193 PROTEINcoord: 95..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig152contigP-littoralis_Contig152:162416..166616 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig152.39.1mRNA_P-littoralis_Contig152.39.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig152 160439..166722 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig152.39.1 ID=prot_P-littoralis_Contig152.39.1|Name=mRNA_P-littoralis_Contig152.39.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=347bp
MVHPKRTRTSSWFLGACVVSSAVHGGAGYLIPATSFFSAADRSERCPRQD
DSFRGNRIAAVPRAAAALWRVAPQQARRQEKSITMKQKQARKKTTRVRLR
RAGPRTDVEGYSHSAFLKMRDEVALQVATTKQGTRRSRKINFSGGLDSCP
CLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVV
VQLPSVIALKEFVNNHRSDPPFTRRNLFLRDSHRCQYCMKYFPPHNLSFD
HVVPKKLGGKGAWDNVVTACGRCNNRKSDCHPRDLRSIGMTLAKYPRTPS
FSELQSKARRYPPSEIHETWEDYLYFESEIVEDDEENEEEDAESAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003615HNH_nuc
IPR029471HNH_5