prot_P-littoralis_Contig152.22.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig152.22.1
Unique Nameprot_P-littoralis_Contig152.22.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length240
Homology
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BLAST of mRNA_P-littoralis_Contig152.22.1 vs. uniprot
Match: A0A6H5K2Z8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z8_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 2.590e-14
Identity = 65/173 (37.57%), Postives = 83/173 (47.98%), Query Frame = 0 
Query:   25 MPRAFGSGDDSPHEDATTRRAGXXXXXXXSDSFAGVMRALLK--SSPSXXXXXXXAE-------------KVVWQPRTALDLSGHSFSKALKAEISRSKQQSREARAAKKCSEMQRTTXXXXXXXXXXXXSVSSRAYTKPSWWAKNGGRDLGDAALSRVSPTSTLPPSPMWLH 182
            +PR  G+    P    ++ R+          +FAGV+RALLK  SSP+        E                WQPRTALDLSGHSFSKALKAEI+RSK++    + +K  S                  S SS    K SWW K   ++  ++  SRVS TST+P SP  LH
Sbjct:   36 IPRRKGN---KPSHTGSSSRSHENERAASGKTFAGVLRALLKPSSSPADASAGSGDEGDGEAPPVGRSGVAGGWQPRTALDLSGHSFSKALKAEINRSKEKKMALKKSKTRS------------MNNLGSSSSSNLAVKDSWWEK---QESEESWFSRVSSTSTIPASPPELH 190
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BLAST of mRNA_P-littoralis_Contig152.22.1 vs. uniprot
Match: D8LRG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG6_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 2.420e-6
Identity = 38/70 (54.29%), Postives = 43/70 (61.43%), Query Frame = 0 
Query:   56 SFAGVMRALLK--SSPSXXXXXXXAEKVV--------------WQPRTALDLSGHSFSKALKAEISRSKQ 109
            +FAGV+RALLK  SSP+        E                 WQPRTALDLSGHSFSKALKAEI+RSK+
Sbjct:   63 TFAGVLRALLKTSSSPADASAGSGDEGEEGEAPPVGRSGVAGGWQPRTALDLSGHSFSKALKAEINRSKE 132
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig152.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2Z8_9PHAE2.590e-1437.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRG6_ECTSI2.420e-654.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 97..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig152contigP-littoralis_Contig152:89348..93709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig152.22.1mRNA_P-littoralis_Contig152.22.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig152 87964..94178 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig152.22.1 ID=prot_P-littoralis_Contig152.22.1|Name=mRNA_P-littoralis_Contig152.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=240bp
MPCGMIATERGMGDGNDSAGNSFHMPRAFGSGDDSPHEDATTRRAGAASS
SSSSDSFAGVMRALLKSSPSPSPSPSPAEKVVWQPRTALDLSGHSFSKAL
KAEISRSKQQSREARAAKKCSEMQRTTTNTTTTTTTTSTSVSSRAYTKPS
WWAKNGGRDLGDAALSRVSPTSTLPPSPMWLHLDGAPLGSESGCRDESGA
DGVIDLQQRHNRQYPGSVCGSRSHDEGLNGSLAVGVGFQ*
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