prot_P-littoralis_Contig152.13.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig152.13.3
Unique Name	prot_P-littoralis_Contig152.13.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	194

Homology

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BLAST of mRNA_P-littoralis_Contig152.13.3 vs. uniprot
Match: A0A6H5KXF6_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXF6_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 9.460e-93
Identity = 151/191 (79.06%), Postives = 161/191 (84.29%), Query Frame = 0

Query:    1 MFASVAARAGLKIRASSARRCPRSAAAAASAGRSAAIHVEAHLESRGIKLPKAIVPPQGNYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGGNISEEDGVAAARLVALNMLATLKCESWDQLGDLDRVARIVKLNGYVQCVDGYTGQPTVVNGASDLLAEAFGQKGIHARSAVGMSSMPLDIPVELEAIVE 191
            M AS AAR G K R S  R C              A+HVEAHLES+GIKLPKAIVPPQG+YVVAYQTGKTLY+SGHIPMTPEGVLLTGTVG +I+EE+GVAAA LVALNMLATLK     QLGDLDRVARIVKLNGYVQCVDGYTGQPT++NGASDLLAEAFG+KGIHARSAVGMSSMPLDIPVELEAIVE
Sbjct:    4 MIASAAARVGAKSRTSLGRCCR-------------AVHVEAHLESKGIKLPKAIVPPQGSYVVAYQTGKTLYVSGHIPMTPEGVLLTGTVGDSITEEEGVAAAHLVALNMLATLKY----QLGDLDRVARIVKLNGYVQCVDGYTGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVE 177

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BLAST of mRNA_P-littoralis_Contig152.13.3 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.330e-52
Identity = 87/155 (56.13%), Postives = 117/155 (75.48%), Query Frame = 0

Query:   37 IHVEAHLESRGIKLPKAIVPPQGNYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGGNISEEDGVAAARLVALNMLATLKCESWDQLGDLDRVARIVKLNGYVQCVDGYTGQPTVVNGASDLLAEAFGQKGIHARSAVGMSSMPLDIPVELEAIVE 191
            + +EA L   GI LP  ++ P+GNY +A +TG  L+++GHIP+   GVL+TG VG + S E+G  AA+++A+N+LATLK E    LGDLD+V RIVKL G+V CVDG++ QP VVNGASD   + FG KG+HARSAVG +++PL+IPVE+EAIVE
Sbjct:    2 VQIEARLAQLGIDLPD-VIAPKGNYALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSE----LGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVE 151

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BLAST of mRNA_P-littoralis_Contig152.13.3 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.710e-51
Identity = 88/155 (56.77%), Postives = 115/155 (74.19%), Query Frame = 0

Query:   37 IHVEAHLESRGIKLPKAIVPPQGNYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGGNISEEDGVAAARLVALNMLATLKCESWDQLGDLDRVARIVKLNGYVQCVDGYTGQPTVVNGASDLLAEAFGQKGIHARSAVGMSSMPLDIPVELEAIVE 191
            IH EA L   G+KLP   VP +GN+ +A ++GK +Y+SGH+P    G LLTG VG  +S E+   AA+L+ALN+L++LK E    +GDLDRV RIVKL G+V CVDG++ QP VVNGASD   + FG KG+HARSAVG +++PL+IPVE+EAIVE
Sbjct:   32 IHTEAKLTEMGLKLPSPGVP-KGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKE----VGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVE 181

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BLAST of mRNA_P-littoralis_Contig152.13.3 vs. uniprot
Match: A0A835Z1E3_9STRA (Putative translation initiation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E3_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.830e-51
Identity = 87/155 (56.13%), Postives = 115/155 (74.19%), Query Frame = 0

Query:   37 IHVEAHLESRGIKLPKAIVPPQGNYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGGNISEEDGVAAARLVALNMLATLKCESWDQLGDLDRVARIVKLNGYVQCVDGYTGQPTVVNGASDLLAEAFGQKGIHARSAVGMSSMPLDIPVELEAIVE 191
            + +EA L  RGI+L    VPP+GNYV A ++G TL+++GHIP+ P+  L  G VG +++ E   A AR VA+N+L+TLK E    LGDLDRV RIVKL G+V C D +TGQP V+NGASDL  E FG+KG+HARSAVG +++PL IPVE+EA++E
Sbjct:   21 VQIEARLAQRGIQLSDP-VPPKGNYVPAVRSGNTLFLAGHIPLMPDNNLAKGKVGKDVTPEQANAIARQVAINILSTLKVE----LGDLDRVTRIVKLVGFVNCTDDFTGQPGVINGASDLFVEVFGKKGVHARSAVGTNALPLGIPVEIEAVIE 170

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BLAST of mRNA_P-littoralis_Contig152.13.3 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.140e-50
Identity = 88/155 (56.77%), Postives = 115/155 (74.19%), Query Frame = 0

Query:   37 IHVEAHLESRGIKLPKAIVPPQGNYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGGNISEEDGVAAARLVALNMLATLKCESWDQLGDLDRVARIVKLNGYVQCVDGYTGQPTVVNGASDLLAEAFGQKGIHARSAVGMSSMPLDIPVELEAIVE 191
            IH EA L   G+KLP   VP +GN+ +A ++GK +Y+SGH+P    G LLTG VG  +S E+   AA+L+ALN+L++LK E    +GDLDRV RIVKL G+V CVDG++ QP VVNGASD   + FG KG+HARSAVG +++PL+IPVE+EAIVE
Sbjct:   83 IHTEAKLTEMGLKLPPPGVP-KGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKE----VGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVE 232

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BLAST of mRNA_P-littoralis_Contig152.13.3 vs. uniprot
Match: A0A812PJA3_9DINO (TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PJA3_9DINO)

HSP 1 Score: 166 bits (420), Expect = 7.930e-49
Identity = 82/158 (51.90%), Postives = 117/158 (74.05%), Query Frame = 0

Query:   37 IHVEAHLESRGIKLPKAIVPP---QGNYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGGNISEEDGVAAARLVALNMLATLKCESWDQLGDLDRVARIVKLNGYVQCVDGYTGQPTVVNGASDLLAEAFGQKGIHARSAVGMSSMPLDIPVELEAIVE 191
            +H EA LE  G++LP    PP   Q NY+++ ++G T++ +GH+PM  +G L++G VG +++ E+  AAA LV LN+L+TLK E    LGDLDRV RIVKLNG+V CVD ++ QP V+NG SDL  + FG +G+HARSA+G +++PL++PVE+EAIVE
Sbjct:   29 VHTEAKLEELGLELP----PPGKAQANYILSVRSGDTIFTAGHLPMMHDGTLMSGKVGVDLNTEEAYAAAELVGLNILSTLKAE----LGDLDRVKRIVKLNGFVNCVDSFSAQPKVINGISDLFGKVFGARGVHARSALGTNALPLNVPVEIEAIVE 178

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BLAST of mRNA_P-littoralis_Contig152.13.3 vs. uniprot
Match: A0A662WS90_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WS90_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.720e-48
Identity = 80/155 (51.61%), Postives = 115/155 (74.19%), Query Frame = 0

Query:   37 IHVEAHLESRGIKLPKAIVPPQGNYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGGNISEEDGVAAARLVALNMLATLKCESWDQLGDLDRVARIVKLNGYVQCVDGYTGQPTVVNGASDLLAEAFGQKGIHARSAVGMSSMPLDIPVELEAIVE 191
            +H+E  LE  G  LP A+  P+GNY  A ++G T+Y++GH+P    G ++TG VG ++++E+G  AA  VAL+++ATLK E    +GDLD++ R+VKL G+V CVDG+T QP V+NGASD + + FG KGIHARSAVG +++PL++ VE+EAIVE
Sbjct:   53 VHIERKLEELGYTLP-AVATPKGNYRTAVRSGNTIYLAGHLPQPAGGDIITGKVGKDLTQEEGYDAAHYVALSLMATLKQE----VGDLDKIKRVVKLVGFVNCVDGFTAQPAVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAIVE 202

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BLAST of mRNA_P-littoralis_Contig152.13.3 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.940e-48
Identity = 83/155 (53.55%), Postives = 113/155 (72.90%), Query Frame = 0

Query:   37 IHVEAHLESRGIKLPKAIVPPQGNYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGGNISEEDGVAAARLVALNMLATLKCESWDQLGDLDRVARIVKLNGYVQCVDGYTGQPTVVNGASDLLAEAFGQKGIHARSAVGMSSMPLDIPVELEAIVE 191
            +H EA L+  GI+LP    P  GN+V+  +TG  LY SGH+P + EG   TG VG  ++EE+   AAR VA+ ++A++K +    LGDLDRV RIVKL G+V C DG+ GQP VVNGASDL AE FG++G+H+RSAVG +++P+++PVE+EAIVE
Sbjct:   19 VHTEAKLKELGIELPTPKAP-LGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQELNEEEAQEAARKVAIQLIASIKKD----LGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVE 168

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BLAST of mRNA_P-littoralis_Contig152.13.3 vs. uniprot
Match: A0A024GIN6_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GIN6_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.050e-47
Identity = 82/156 (52.56%), Postives = 110/156 (70.51%), Query Frame = 0

Query:   37 IHVEAHLESRGIKLPKAIVPPQGNYVVAYQTGKTLYISGHIPMTPEG-VLLTGTVGGNISEEDGVAAARLVALNMLATLKCESWDQLGDLDRVARIVKLNGYVQCVDGYTGQPTVVNGASDLLAEAFGQKGIHARSAVGMSSMPLDIPVELEAIVE 191
            +H+E  L+  G  LP A   P+GNY    +TG TLYI+GH+P  P G  L+ G VG  IS E G  AA+ VALN++AT+K    +Q+GDLD+V ++++L G+V CVDGYT  P ++NGASDL  E FG KG+HAR AVG +++P +IPVE+EAIVE
Sbjct:   21 VHIEKRLKELGYTLPPA-PQPKGNYRTCLRTGNTLYIAGHLPFPPNGGELICGKVGKEISPEQGYKAAQYVALNLIATIK----EQVGDLDKVKQVIRLGGFVNCVDGYTALPGIINGASDLFCEVFGDKGLHARLAVGNNALPFNIPVEIEAIVE 171

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BLAST of mRNA_P-littoralis_Contig152.13.3 vs. uniprot
Match: A0A6A3U578_9STRA (YjgF_endoribonc domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U578_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.070e-46
Identity = 77/155 (49.68%), Postives = 112/155 (72.26%), Query Frame = 0

Query:   37 IHVEAHLESRGIKLPKAIVPPQGNYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGGNISEEDGVAAARLVALNMLATLKCESWDQLGDLDRVARIVKLNGYVQCVDGYTGQPTVVNGASDLLAEAFGQKGIHARSAVGMSSMPLDIPVELEAIVE 191
            +H+E  LE  G  LP A+  P+GNY  + ++G T+Y++GH+P    G L+ G +G +++ E G  AA  VAL+++ATLK E    +GDLD++ R+VKL G+V CVDG+T QP V+NGASD + + FG KGIHARSAVG +++PL++ VE+EA+VE
Sbjct:   17 VHIERKLEQLGYTLP-AVADPKGNYRTSVRSGNTIYLAGHLPQPAGGELILGKIGQDLTPEQGYDAAHYVALSLMATLKHE----VGDLDKIKRVVKLVGFVNCVDGFTQQPAVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAVVE 166

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig152.13.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig152.13.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXF6_9PHAE	9.460e-93	79.06	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR0_9STRA	2.330e-52	56.13	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR9_9STRA	1.710e-51	56.77	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
A0A835Z1E3_9STRA	1.830e-51	56.13	Putative translation initiation inhibitor n=1 Tax=...	[more]
W7TB75_9STRA	1.140e-50	56.77	Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad...	[more]
A0A812PJA3_9DINO	7.930e-49	51.90	TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2...	[more]
A0A662WS90_9STRA	1.720e-48	51.61	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A6H5KXY4_9PHAE	1.940e-48	53.55	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A024GIN6_9STRA	1.050e-47	52.56	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
A0A6A3U578_9STRA	1.070e-46	49.68	YjgF_endoribonc domain-containing protein n=4 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 28..192 e-value: 2.3E-52 score: 178.7
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 38..191
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 40..187 e-value: 2.2E-27 score: 96.0
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	CDD	cd02199	YjgF_YER057c_UK114_like_1	coord: 47..191 e-value: 8.4692E-63 score: 189.208
None	No IPR available	PANTHER	PTHR43760	ENDORIBONUCLEASE-RELATED	coord: 32..191

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig152	contig	P-littoralis_Contig152:52939..58095 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig152.13.3	mRNA_P-littoralis_Contig152.13.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig152 52939..59153 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig152.13.3 ID=prot_P-littoralis_Contig152.13.3|Name=mRNA_P-littoralis_Contig152.13.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=194bp
MFASVAARAGLKIRASSARRCPRSAAAAASAGRSAAIHVEAHLESRGIKL
PKAIVPPQGNYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGGNISEEDGV
AAARLVALNMLATLKCESWDQLGDLDRVARIVKLNGYVQCVDGYTGQPTV
VNGASDLLAEAFGQKGIHARSAVGMSSMPLDIPVELEAIVEAV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035959	RutC-like_sf
IPR013813	Endoribo_LPSP/chorism_mut-like