mRNA_P-littoralis_Contig152.11.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig152.11.1
Unique NamemRNA_P-littoralis_Contig152.11.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig152.11.1 vs. uniprot
Match: D8LRH6_ECTSI (Ornithine cyclodeaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRH6_ECTSI)

HSP 1 Score: 604 bits (1558), Expect = 1.390e-208
Identity = 317/368 (86.14%), Postives = 327/368 (88.86%), Query Frame = 1
Query:  121 RIAARKAAAASPSISNKLRTGVVATA-----GSSIEQTACRAFATVPGPRLFDYETVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESATAGPGDCHIKGGYISGTSTWTVKLANVSFYKNIEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDAAKTQQWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGEVVNGDKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSK 1209
            RI+AR+AAAA+PS  NKL  GVVA++     GS IEQTACRAFATVPGPRLFDY+TVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDES  AGPGDCHIKGGYISGTSTWTVKLANVSFYKN+EKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLD  KT++WADEIEAELGYKV                          VELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIG+VVNGDKPGR GEELILVDLTGTGAQDAAIGQVAWDILSK
Sbjct:    6 RISARRAAAAAPSAGNKLHKGVVASSSAGSSGSIIEQTACRAFATVPGPRLFDYDTVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESEKAGPGDCHIKGGYISGTSTWTVKLANVSFYKNVEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVVKTKEWADEIEAELGYKV--------------------------VELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGDVVNGDKPGRTGEELILVDLTGTGAQDAAIGQVAWDILSK 347          
BLAST of mRNA_P-littoralis_Contig152.11.1 vs. uniprot
Match: A0A7S2RSZ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSZ5_9STRA)

HSP 1 Score: 520 bits (1340), Expect = 6.130e-175
Identity = 253/331 (76.44%), Postives = 291/331 (87.92%), Query Frame = 1
Query:  220 ACRAFATVPGPRLFDYETVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESATAGPGDCHIKGGYISGTSTWTVKLANVSFYKNIEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDAAKTQQWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGEVVNGDKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSKK 1212
            ACR  A++P PRLFDYET+ + +K++DAV +VEAAFGMLAKGKVDVPIPMHIGIDE+ TAGPGDCHIKGGYISGT+TWTVK ANVSFYKN+EKGLP GSGIF+VCDATNGAPLAI QENR+LTDLRTGAAGA+SVKHFA+  HKKV F+G GVIA AMAR +  +H+FD+GFA+GLD     Q+AD I ++LGY V VC TAEE VR +DV+FTQT G+  V++LDWL+PHATIIASGSDQPTKNEIP EVQ+ SK+VCDLVRQC +VGELRSAI AGVM+ DDVYAEIGEVVNG KPGR G+ELILVDLTGTGAQDAAIGQVAW++LS+K
Sbjct:   68 ACRGVASLPPPRLFDYETIRANVKEADAVSSVEAAFGMLAKGKVDVPIPMHIGIDETETAGPGDCHIKGGYISGTTTWTVKCANVSFYKNVEKGLPPGSGIFIVCDATNGAPLAIMQENRYLTDLRTGAAGAISVKHFASPKHKKVAFIGTGVIAQAMARATNTLHQFDQGFAFGLDDGMNAQFADTIHSQLGYPVQVCATAEEAVRSADVIFTQTTGANHVLQLDWLQPHATIIASGSDQPTKNEIPPEVQRQSKLVCDLVRQCSRVGELRSAIAAGVMSEDDVYAEIGEVVNGTKPGREGDELILVDLTGTGAQDAAIGQVAWEVLSQK 398          
BLAST of mRNA_P-littoralis_Contig152.11.1 vs. uniprot
Match: A0A6T5N8F9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N8F9_HETAK)

HSP 1 Score: 483 bits (1243), Expect = 4.540e-161
Identity = 243/344 (70.64%), Postives = 277/344 (80.52%), Query Frame = 1
Query:  184 VVATAGSSIEQTACRAFATVPGPRLFDYETVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESATAGPGDCHIKGGYISGTSTWTVKLANVSFYKNIEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAAR-HHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDAAKTQQWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGEVVNGDKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSKK 1212
            V AT G +      RAFA+VP PRLFDY+TV S LK SDA+ AVE AFG LAKG+VDVPIPMHIGI E+ TAGPGDCHIKGGY+ G +TWTVKLANVSFYKN+EKGL  GSGIF+VCDATNGAPL IFQENR+LTDLRTGAAGA+SVK+F A   HK + F+G G IA +MA+G+ CVH F++GF YGLD A  +++A EIEA  GY V VC TAEE VR  DVVFTQT GS  V+E DWLRPHATIIASGSDQPTK EIP +V   +KMVCDL  QC + GELRSA+K G MT  DV+AE+GEVVNG K GR G+EL+LVDLTGTGAQDAAIGQVAW+ILS+K
Sbjct:   10 VRATRGVATPVVVARAFASVPPPRLFDYQTVRSTLKPSDAISAVEEAFGKLAKGEVDVPIPMHIGIHETETAGPGDCHIKGGYVLGATTWTVKLANVSFYKNLEKGLSPGSGIFIVCDATNGAPLGIFQENRYLTDLRTGAAGALSVKYFGASPKHKNISFIGTGAIAESMAKGTACVHNFEQGFCYGLDRAMNERFAAEIEATCGYPVKVCDTAEEAVRSGDVVFTQTVGSSVVLEGDWLRPHATIIASGSDQPTKQEIPVDVMARAKMVCDLTAQCARFGELRSALKEGAMTEADVHAELGEVVNGTKAGREGDELVLVDLTGTGAQDAAIGQVAWEILSQK 353          
BLAST of mRNA_P-littoralis_Contig152.11.1 vs. uniprot
Match: A0A7S0H4T2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H4T2_9EUKA)

HSP 1 Score: 483 bits (1242), Expect = 5.970e-161
Identity = 243/328 (74.09%), Postives = 277/328 (84.45%), Query Frame = 1
Query:  220 ACRAFATVPGPRLFDYETVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESATAGPGDCHIKGGYISGTSTWTVKLANVSFYKNIEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDAAKTQQWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGEVVNGDKPGRVGEELILVDLTGTGAQDAAIGQVAWDIL 1203
            A R  ATV  P+LF YE + + +K+ DA+ +VEAAFGMLAKGKVDVPIPMHIGI+ES  AGPGDCHIKGGYI GT TWTVKLANVSFYKN++KGLP GSGIFVV DATNG PLAIFQENR+LTDLRTGAAGAVSVKHFAA+ H KV F+G G+IA AMAR S  VH + E   +GLD A+TQ++ DE+EAEL +   VCK+AEE V  SDV+FTQTP ++TV+EL WL+PHATIIASGSDQ TKNEIP EV KASKMVCDLVRQC +VGELRSA++AGVM   DVYAEIGEVVNG KPGR G+ELI+VDLTGTGAQDAAIGQVAW++L
Sbjct:   20 ARRGLATVNPPKLFSYEEIKTGVKEKDAISSVEAAFGMLAKGKVDVPIPMHIGIEESPEAGPGDCHIKGGYIYGTKTWTVKLANVSFYKNLDKGLPPGSGIFVVIDATNGFPLAIFQENRYLTDLRTGAAGAVSVKHFAAKDHTKVCFLGTGMIAGAMARASSEVHGWTEANCFGLDEAQTQRFCDEMEAELKFPFKVCKSAEEAVGSSDVIFTQTPAAQTVLELGWLKPHATIIASGSDQSTKNEIPVEVMKASKMVCDLVRQCSKVGELRSALEAGVMKETDVYAEIGEVVNGTKPGREGDELIVVDLTGTGAQDAAIGQVAWNVL 347          
BLAST of mRNA_P-littoralis_Contig152.11.1 vs. uniprot
Match: A0A7R9UBH1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBH1_9STRA)

HSP 1 Score: 474 bits (1219), Expect = 2.320e-157
Identity = 238/331 (71.90%), Postives = 274/331 (82.78%), Query Frame = 1
Query:  220 ACRAFATVPGPRLFDYETVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESATAGPGDCHIKGGYISGTSTWTVKLANVSFYKNIEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDAAKTQQWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGEVVNGDKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSKK 1212
            A RA AT+P P+LFDY T+TS LK S A+EAVEAAFG LAKG+VDVPIPMHIGIDESA AGPGDCHIKGGYI GT+TWTVKLANVSFYKN++KGLP GSG+F+VCDATNGAPL IFQENR++TDLRTGAAGAV+VKH   R   KV FVG GVI  AMA     VH+F  G  +GLD A+++ +A +I  ELGY + VC T E+ +  +DVVFT TP +  V+EL  L+P ATIIASGSDQPTK EIP EVQKAS+MVCDLVRQC +VGELRSAI+AGVMT DDV+AE+GE+VNG KPGRVG+ELILVDLTGTGAQDAAIGQVAW++L  K
Sbjct:   30 ARRAMATLPPPQLFDYATITSNLKVSQAIEAVEAAFGALAKGEVDVPIPMHIGIDESAAAGPGDCHIKGGYIFGTTTWTVKLANVSFYKNVDKGLPPGSGVFIVCDATNGAPLGIFQENRYMTDLRTGAAGAVAVKHCVNRDADKVCFVGGGVINLAMATACASVHDFRSGTVFGLDMAQSEAFAKQITDELGYPMTVCDTVEDALADADVVFTATPAAAPVLELGMLKPSATIIASGSDQPTKQEIPVEVQKASRMVCDLVRQCSRVGELRSAIEAGVMTEDDVHAELGEIVNGTKPGRVGDELILVDLTGTGAQDAAIGQVAWEVLGSK 360          
BLAST of mRNA_P-littoralis_Contig152.11.1 vs. uniprot
Match: A0A7S2XZG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZG6_9STRA)

HSP 1 Score: 451 bits (1159), Expect = 5.240e-149
Identity = 215/297 (72.39%), Postives = 257/297 (86.53%), Query Frame = 1
Query:  226 RAFATVPGPRLFDYETVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESATAGPGDCHIKGGYISGTSTWTVKLANVSFYKNIEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDAAKTQQWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGEVVNGDKPG 1116
            R  + VP P LFDYET+ + LK++DA+E+VEAAFGML++GKVDVPIPMHIGIDES  AGPGDCHIKGGY+ GT+TWTVKLANVSFYKN+EKGLP GSG+F+VC+A NGAPL IFQENR+LTDLRTGAAGA+SVK+F A+ H KV F+GAGVIA AMAR S CVH+F EGFAYGLD A+T+ +  E+ +ELG+   VC+TAEE VR +DV+FTQT G+  V++LDWL+PHATIIASGSDQPTKNEIP++V K SKM+CDLVRQC +VGELR+AIK GVMT DDV+AEIG+VV G+KPG
Sbjct:   23 RCLSGVPPPLLFDYETIKANLKEADAIESVEAAFGMLSQGKVDVPIPMHIGIDESDAAGPGDCHIKGGYVYGTTTWTVKLANVSFYKNLEKGLPPGSGVFIVCNAVNGAPLGIFQENRYLTDLRTGAAGAISVKNFVAKEHTKVAFIGAGVIAQAMARASSCVHKFTEGFAYGLDTAQTEGFVSEMSSELGFPFKVCETAEEAVRSADVIFTQTTGAAPVLQLDWLKPHATIIASGSDQPTKNEIPSDVMKKSKMICDLVRQCSKVGELRTAIKEGVMTEDDVFAEIGDVVLGNKPG 319          
BLAST of mRNA_P-littoralis_Contig152.11.1 vs. uniprot
Match: C1MM99_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MM99_MICPC)

HSP 1 Score: 416 bits (1069), Expect = 3.550e-135
Identity = 202/322 (62.73%), Postives = 251/322 (77.95%), Query Frame = 1
Query:  241 VPGPRLFDYETVTSVLKQS-DAVEAVEAAFGMLAKGKVDVPIPMHIGIDESATAGPGDCHIKGGYISGTSTWTVKLANVSFYKNIEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDAAKTQQWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGEVVNGDKPGRVGEELILVDLTGTGAQDAAIGQVAWDIL 1203
            +P P+L+DY+T+ S +K + +  E+VEAAF  LAKGKVDVP+PMHIGI E+A AGPGDCHIKGGYI G  TWTVKLA VSFYKN+EKGLPAGSG+FVVCDATNG P A+  ENR+LTD+RTGAAGAV VKH A +  K V F+G GVIA +MAR +  V+ F++G+ Y  +  K   + D+++ ELGY    C +AEE VR +DVVFTQTPG E V++L WL+PHATIIASGSDQPTKNEIP EV K +K++ D+  QC +VGE+RSA+ AGVM   DV+AE+GE++NG K GR G+ELI+ DLTGTGAQDAAIG    ++L
Sbjct:   22 LPAPKLYDYDTIVSKVKPNKELTESVEAAFAELAKGKVDVPLPMHIGIAETAAAGPGDCHIKGGYIEGAPTWTVKLACVSFYKNVEKGLPAGSGVFVVCDATNGGPKAVLHENRYLTDMRTGAAGAVCVKHLAVKGAKSVAFIGTGVIAESMARSTATVYGFEQGYGYSRNIDKATAFCDKMQKELGYDFKACDSAEEAVRNADVVFTQTPGGEWVLDLAWLKPHATIIASGSDQPTKNEIPPEVMKKAKVITDITAQCVRVGEVRSAVAAGVMKESDVHAELGEIINGSKKGRQGKELIVCDLTGTGAQDAAIGSYVMNVL 343          
BLAST of mRNA_P-littoralis_Contig152.11.1 vs. uniprot
Match: A0A7S4QLX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QLX7_9STRA)

HSP 1 Score: 415 bits (1066), Expect = 1.620e-134
Identity = 216/332 (65.06%), Postives = 258/332 (77.71%), Query Frame = 1
Query:  217 TACRAFATVPGPRLFDYETVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESATAGPGDCHIKGGYISGTSTWTVKLANVSFYKNIEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDAAKTQQWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHA-TIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGEVVNGDKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSK 1209
            T  RA +  P PRLFDYETVT+ L  SDA+++VE AF  LA+G VDVP+PMHIGI+E+A AGPGDCHIKGGYIS T T+TVKLA VSFYKNIE+GLP GSGIF+V +A  GAPL +FQENRF+TDLRTGAAGAV++KH      + VGF+G G IA  MAR +  V  F +G AY    A  +++A E+EAELG    V  TA+E  + SD++FTQTPG+ETV+E DWL P   TIIASGSDQPTK EIP +V KASK + DL +Q  +VGELR  I+AGVMT DDVYAE+GE+VNGDKPGR G+E+I+VDLTGTGAQDAAIGQVAWD LS+
Sbjct:   28 TPMRALSGFPAPRLFDYETVTANLSVSDAIDSVEEAFSALARGNVDVPMPMHIGIEETAAAGPGDCHIKGGYISSTPTFTVKLACVSFYKNIERGLPPGSGIFIVVNAVTGAPLGVFQENRFMTDLRTGAAGAVAMKHCTTVDQEVVGFIGCGAIARNMARAAAAVRPF-KGVAYAFAGA--EEFAKEMEAELGMPFEVTATAKELCQMSDIIFTQTPGAETVLEKDWLNPKGVTIIASGSDQPTKQEIPNDVLKASKYISDLTKQTSKVGELRGPIQAGVMTVDDVYAELGEIVNGDKPGREGDEIIVVDLTGTGAQDAAIGQVAWDKLSQ 356          
BLAST of mRNA_P-littoralis_Contig152.11.1 vs. uniprot
Match: A0A6T7KGU3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6T7KGU3_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 6.610e-134
Identity = 219/336 (65.18%), Postives = 262/336 (77.98%), Query Frame = 1
Query:  211 EQTACRAFATV--PGPRLFDYETVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESATAGPGDCHIKGGYISGTSTWTVKLANVSFYKNIEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDAAKTQQWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHA-TIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGEVVNGDKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSK 1209
            +Q A RAFAT   P PRLFDYETVTS L  +DA+E+VEAAF  LAKGKVDVP+PMHIGI+ES+ AGPGDCHIKGGY+S T T+TVKLA VSFYKN+EKGLP GSGIF+V +A  GAPL +FQENRF+TDLRTGAAGAV++K+ ++     VGF+G G IA  MAR +  V    +G AY +D A  +++A E+ AELG    V  +AEE   +SD+++TQTPG+ TV+E DWL P   TIIASGSDQPTK EIP +V  ASK + DL +Q  +VGELRSA+KAGVMT  DVYAE+GEVVNGDK GR G E+I+VDLTGTGAQDAAIGQVAWD LS+
Sbjct:   26 QQVATRAFATAGFPPPRLFDYETVTSNLTVADAIESVEAAFKALAKGKVDVPMPMHIGIEESSVAGPGDCHIKGGYVSATPTFTVKLACVSFYKNVEKGLPPGSGIFIVVNAVTGAPLGVFQENRFMTDLRTGAAGAVAMKYCSSPEQDVVGFIGCGAIAKNMARAAATVRPI-KGVAYAIDGA--EEFAAEMSAELGVPFEVVSSAEELCGKSDIIYTQTPGASTVLEKDWLNPKGVTIIASGSDQPTKCEIPPDVLAASKYISDLTKQTSKVGELRSALKAGVMTEADVYAELGEVVNGDKAGREGNEIIVVDLTGTGAQDAAIGQVAWDKLSQ 358          
BLAST of mRNA_P-littoralis_Contig152.11.1 vs. uniprot
Match: R1CUZ0_EMIHU (Ornithine cyclodeaminase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CUZ0_EMIHU)

HSP 1 Score: 412 bits (1060), Expect = 8.070e-134
Identity = 210/323 (65.02%), Postives = 247/323 (76.47%), Query Frame = 1
Query:  241 VPGPRLFDYETVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESATAGPGDCHIKGGYISGTSTWTVKLANVSFYKNIEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDAAKTQQWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGEVVNGDKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSK 1209
            +P P+LFDY TVTS +  SDA+ AVEAAFG LA+GKVDVP PMHIGIDE+A+AGPGDCHIKGGY+SG STWTVKLA VSFYKN+  GLP G GIFVV +A NGAPLA+ QENRFLTD+RTGAAG +SVK+      K VGF+G G IA +MAR +  V     GFAYG DA   Q + DE+ AELG +     +AEE    + VVFTQTPGS TV+E   L+P +T+IASGSDQPTK E+P ++    K VCDLV Q  +VGELRSA+ AG MT  DVYAE+G+VVNGDKPGR G+E+I+ DLTGTGAQDAAIGQVAW+ LSK
Sbjct:   22 IPPPKLFDYATVTSHIHVSDAISAVEAAFGALARGKVDVPFPMHIGIDETASAGPGDCHIKGGYVSGESTWTVKLACVSFYKNVADGLPPGGGIFVVMNAKNGAPLAVIQENRFLTDVRTGAAGGISVKYLTKPTDKTVGFIGTGAIAKSMARATAAVRPGFTGFAYGADAEMAQSFCDEMRAELGCEFTAVGSAEELCASAKVVFTQTPGSATVLERSMLQPGSTVIASGSDQPTKQELPVDLLANCKYVCDLVGQVSKVGELRSALAAGAMTEADVYAELGQVVNGDKPGREGDEIIVCDLTGTGAQDAAIGQVAWEKLSK 344          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig152.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRH6_ECTSI1.390e-20886.14Ornithine cyclodeaminase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2RSZ5_9STRA6.130e-17576.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6T5N8F9_HETAK4.540e-16170.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0H4T2_9EUKA5.970e-16174.09Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7R9UBH1_9STRA2.320e-15771.90Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XZG6_9STRA5.240e-14972.39Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
C1MM99_MICPC3.550e-13562.73Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A7S4QLX7_9STRA1.620e-13465.06Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6T7KGU3_9STRA6.610e-13465.18Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
R1CUZ0_EMIHU8.070e-13465.02Ornithine cyclodeaminase n=2 Tax=Emiliania huxleyi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig152contigP-littoralis_Contig152:40191..46275 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog227086.JGI_V11_49337
PFAMsOCD_Mu_crystall
Model size2656
Max annot lvl2759|Eukaryota
KEGG rclassRC00354
KEGG koko:K01750
KEGG ReactionR00671
KEGG Pathwayko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230
Hectar predicted targeting categorymitochondrion
Exons4
Evalue2.8e-170
EggNOG OGsCOG2423@1|root,KOG3007@2759|Eukaryota
Ec32 ortholog descriptionOrnithine cyclodeaminase
Ec32 orthologEc-18_004550.1
EC4.3.1.12
Descriptionthiomorpholine-carboxylate dehydrogenase activity
Cds size1110
COG categoryE
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig152.11.1prot_P-littoralis_Contig152.11.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig152 40296..44834 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789725.9759533-UTR-P-littoralis_Contig152:40190..402951680789725.9759533-UTR-P-littoralis_Contig152:40190..40295Pylaiella littoralis U1_48UTRP-littoralis_Contig152 40191..40295 +
1680789726.037584-UTR-P-littoralis_Contig152:44834..462751680789726.037584-UTR-P-littoralis_Contig152:44834..46275Pylaiella littoralis U1_48UTRP-littoralis_Contig152 44835..46275 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789725.994397-CDS-P-littoralis_Contig152:40295..406881680789725.994397-CDS-P-littoralis_Contig152:40295..40688Pylaiella littoralis U1_48CDSP-littoralis_Contig152 40296..40688 +
1680789726.0049863-CDS-P-littoralis_Contig152:43029..434131680789726.0049863-CDS-P-littoralis_Contig152:43029..43413Pylaiella littoralis U1_48CDSP-littoralis_Contig152 43030..43413 +
1680789726.0189946-CDS-P-littoralis_Contig152:43900..439871680789726.0189946-CDS-P-littoralis_Contig152:43900..43987Pylaiella littoralis U1_48CDSP-littoralis_Contig152 43901..43987 +
1680789726.0285478-CDS-P-littoralis_Contig152:44588..448341680789726.0285478-CDS-P-littoralis_Contig152:44588..44834Pylaiella littoralis U1_48CDSP-littoralis_Contig152 44589..44834 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig152.11.1

>prot_P-littoralis_Contig152.11.1 ID=prot_P-littoralis_Contig152.11.1|Name=mRNA_P-littoralis_Contig152.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=370bp
MIPSLRIAARKAAAASPSISNKLRTGVVATAGSSIEQTACRAFATVPGPR
LFDYETVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESATAGP
GDCHIKGGYISGTSTWTVKLANVSFYKNIEKGLPAGSGIFVVCDATNGAP
LAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGS
KCVHEFDEGFAYGLDAAKTQQWADEIEAELGYKVHVCKTAEECVRQSDVV
FTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLV
RQCEQVGELRSAIKAGVMTRDDVYAEIGEVVNGDKPGRVGEELILVDLTG
TGAQDAAIGQVAWDILSKK*
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mRNA from alignment at P-littoralis_Contig152:40191..46275+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig152.11.1 ID=mRNA_P-littoralis_Contig152.11.1|Name=mRNA_P-littoralis_Contig152.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6085bp|location=Sequence derived from alignment at P-littoralis_Contig152:40191..46275+ (Pylaiella littoralis U1_48)
CACGCACGCTTTTGGGCGCACCTACGAGCACCTACAGCAGCAGGGCAGTG ACTTGAAAACCCACACCCCAGCATCAGCACCAGCATTAATACCAGCATCA ACACCATGATTCCATCCCTGAGGATCGCTGCCAGAAAAGCTGCTGCAGCG TCTCCTTCTATCAGCAACAAACTCCGCACCGGCGTCGTTGCAACAGCTGG CAGCAGTATCGAACAAACCGCGTGCCGAGCCTTCGCGACGGTACCAGGGC CTCGCCTGTTCGACTACGAGACGGTGACGTCCGTGCTAAAGCAGAGCGAT GCCGTGGAGGCCGTCGAAGCCGCGTTCGGCATGCTCGCCAAGGGAAAGGT AGACGTGCCCATCCCAATGCACATCGGCATCGACGAGTCCGCAACGGCGG GACCCGGAGACTGCCACATCAAGGGCGGGTACATCTCGGGCACCTCGACG TGGACAGTCAAGCTCGCGAACGTGTCCTTCTACAAGAACATTGAGAAGGT GGGTGGGTGGATGGGTTGGCCATCACGTGCGCTGCTGCATTATCTTTCCC GCTCGTTGCCTTGTTTACTGTCTTTATCTTGTGTCTGTGTGCAGCCGCGG TTGGTCGGCTTGTCTGAACACGGATGCGGCGTGTTTGTTACACGCGTACG TAATTGGTGAATGGGTGCCATATCCAACTTGGTTCAGCACAGCAGTTATA ACGTCGCAGTTCAGTTCTCCACGCCGTCGCTGCCACCAAATTCGCCACGC TCTCGGCTACTCCAGTCCGCTGCTGAGCTCTGCCTGTCTTATTCACCTAA TCGGCTGTCCGAATTGACACTTTTGCCTGACGTCTGCACAAGCACCGTAC GCCGGTCGCCCTTTCTTGTTTCTCGTCAACGACCCAAAAACAAATGTCCG TGATACAGCAGCAGCTGACATCTGCGACGATTACGATTTCATCATGAGCA GTCATGCAGTTGTGGTCAACCAAATTTCACGACTCCAGCACTCCAGCGCT GCTCGCCCCGCGCACAGCGGCGGTCAAGGTCGGTAACAACGACACACTCC GAAACAACTGGCGAGCAATCAATCGCGGTCTGACAAACCATCCTGTCGCT GTGGTATGATTAGACCGCCGTTCTATGAACCCTGCATCACGTTGTGCCTG ACTTGAATGCCATCATTTATCTCCTTTCTTTGCCCGGGACACCACAGCAA CGTAGTCACGTTACTGCTGTCGTTGTGATCGCGAAGGTTTTGGCGCTAGA TTTCGATGCGGCTGTGTGCTGTGTGTGTGGACTGCCATCCCATCTAAATT CCAGGCTACAGACTCCGCCTTTTGGTATAAGTTGGGCGCATCAACCGGGG TCATATCGTACAGGAGGAAGGTCGACACTGGAATTTTTATTTTATTTTTC CTCACCTTCCTCTATGACGAACCTTGCCTTCGGCTTTCGGCTATATCTCA CTTCTTGAGTCTTACGAGCCATTACCTTGAGAGAGATTTCTGGACGCTGG CCTGAAAACGCCATCCATTGTGACCGGAAACGGTCATTTCGCCGTCGACT CTTCGGGTGAGTCTCTCCGGTAGCCCCAAAACGATCACAACAACTATTTC ATCGGGTAGCTTGCACCTGTCGGAAACCTGTTACTGTTTTTGGAGGCAAC GAGTTTGAGCATCCCCACGTCGGTTACGGTAGGTAGCCTTTCACGATGAG ACGACCTGCATCTGTTAGCCCATCGATAGCTGGCAGCCTCTGATGTACGC TGTAGGAGAAGGAACACACACACACACACACACACACACACACACACACA CACACACACACACACACACACACACACACACACACTACACACAGCTCACG GGCGATGGCTCTGGTATTGCGGTGGCTCCTTTCGTTCGAGAGCAGTGGAC AAAAAAAAGATCGAGCTGGCAGCTAGCAAGCAGAGATTTTCGCCGCGACA CCAGTCTGATATTTTGTCCATCGCTCTCGAACGAATGAAGCCGCAGTAAT TCTGAAGCCATACCTCGCGAGCTGTGTATATGGTCCTTTTCCTGCGGTGG TCATCTGAAGCGGCGAGGCATCTATAGCCTGCCTATCAATGGAGGTTTGC AGGGATCTAAGGACGTGTGAAGACACGAAGAAATCACCGTATTGTTATTG GTCTACATACTGGTGCGCTGTGTTTATACTGTTGTCATCCCATATTCTCT GGCACACTAGTCTGCACCCTGCGGTTCAAACTACAGGCTAGGCCCATCGA CGGGGTCACACAGGAGGAAGGTCAACACAGGAGGAGTTACCCCCACCTTC CTTCTGCGGTACATGCGTGAGATTTTTTCTCGCGAGCAGGGATCCGCGGT CCCTACCCTCGTCGGCGAAGCCGAATCTGCTTTTACTAACAGCATAGCCG CTTTCAAAGTAGCAAAGGAACACATTCACCGGGAATCGAACCCCCGTTCC TCTGCATCTATATTTCAATGCGTTCCAAAATGTCCGTGACAGATGCCTTC GTTCCGTGGCCAAAGACTGCTGTAAAGTACACCTATTCATACAAGGTATT CTATGCCCAAATGTTAAAATAAAAAAATACAAGTGGCAGGCAGAAAGAAA AAAGCCGAAGCGTGAACTTTAGTAATAAACCACGAGAGCCCAGGAGACGA AACAGAAAAAACAGACAATTGAAACAGAAAAAACAGACAATTCTGTTGTC AAAGTTAATCGAAGGAACGAAAAAGAAAAAGAAAAAGAAAAAAGAAAAAG AACATCGTTTGAAATGATGCAGTGGTTGACCTCCATGTGCCTGCCCCCCC CCCCCGCCACTGCCCCCCCGTCACGAAATATAAAAACAGGGCCTTCCCGC CGGATCCGGCATCTTCGTCGTCTGCGACGCCACAAACGGCGCTCCCCTGG CCATCTTCCAGGAGAATCGCTTCCTCACGGACCTCCGGACGGGCGCCGCG GGCGCGGTCTCCGTGAAGCACTTCGCGGCTCGCCACCACAAGAAGGTCGG CTTCGTCGGCGCCGGGGTGATCGCGGCCGCGATGGCGCGAGGGTCCAAGT GTGTGCACGAGTTCGACGAGGGCTTCGCGTACGGGCTGGACGCGGCCAAG ACCCAGCAGTGGGCGGACGAGATCGAGGCGGAGCTGGGGTACAAGGTGCA CGTCTGCAAGACGGCCGAGGAGTGCGTGCGGCAGTCGGATGTGGTGTTCA CGCAGACTCCCGGGTCAGAAACGGTGCGCACATCGGGTTGGGTTGGGTTA GGTTGGGGCTGCGATGCGTTGCGTTGGATGGGGATATGAGAATTGCTACT CTTCTGTATTTGCCAGTACGTACGTGAGCCCCAACAAGCCACTACTGCTG TTGTATGATGGGCGTACTTTGGTTCCGTGGGCTGTAGTACTGCAGAGAAG ACGCCGCCTGGACCGATCCGTGCAGCTCGGCTGCTCCGCATCGAAGAGCG TGATGTCGCCTGGAACGACACCCCCTCTTGAAGAGCACTCGGCAAGATTT TTCCACCGCCGCCCCCGTCCGGCACTGTCGATCAACTATTTTATCTGCTG CTCTGCGGTAGGAAATAGTATCGAGCATGTCAATCGGCCAACGGGTGCCA TGTGATATCTTCCGTAAATATGGCATGCGTGACTTGCTTTCTGTGAGATA ACAGTCACGACTGAATGCCATGTCATGTCATGTCATGTCATGTGTTTGTT TGAACAACAGGTGGTCGAGCTGGACTGGCTGCGACCGCACGCGACCATCA TCGCCAGCGGTTCGGACCAGCCCACCAAGAACGAGATCCCGGCGGAGGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGGATGCATTGGGTACTGAAAAGC GTGTAAATATTGCGTGAAGGGCTGTTTTGTTTAGCGCAGCTGGTCTCCCC TCTCCTCCGCTCTCTCTCTCTCTCTTTCTATCCCTCTCTCCGAGACGTGG CACATGTGTAGCTACTGTCCGATCAGCAGGCAGCTCAACTCCATTTGGGT GCCTTAGATTGGTTTTTCCTGTGACCGTGAAGCTGCTCGATACGCCAACT CATCTAGAAAACCTCACATGACGAAAAATGTTAGCCACTGCGGACAACAA CGGTCAAAAAGAGTGGCCAGCAGTGCAGACATTCAGCCTCGCTTTCCTTG TAGCGTGCTCTTGGTCTGGACGAAACACCTCACTGTATTTCAGTGGCAGA ATTGCCGAGTACAAGATAAACGGTGTTTCATTCAAGAGCCCGCACCCAAT ACCTATGCTGATGCAATATAGAGAAGCTGTTGACGAAGCTCCGCGTGCAA AACGTGGCCTCACAGGAAAGCTCACGCCAGCAACAACGTGCTAAAATACT TTTCGGTTTGACTGGTGCTGTCTGCTTGCGTGGGCACGCACACCACAGGT GCAGAAGGCGAGCAAGATGGTGTGCGACCTGGTGCGGCAGTGCGAGCAGG TCGGGGAGCTCCGCAGCGCCATCAAGGCCGGGGTCATGACGAGGGACGAC GTCTACGCCGAGATCGGGGAGGTGGTGAATGGCGACAAGCCCGGGCGGGT CGGCGAGGAGCTCATCCTTGTGGACCTTACCGGAACCGGGGCGCAGGACG CAGCCATCGGGCAGGTTGCCTGGGACATTCTCTCCAAGAAATAGAGAGAG GCGTTCGTCACGAAAAGTAAAAAAGCGGGTGTTCGTATGATAGTTCGTTC CGCCCAAGGAGTTCAAATATCACAAGGGACAATGGCCCAGACAGCAATGT CTGCACGATGGGGATCGCTGCTGTTTACTGACTCCGCTGCCGTGATGGCT TGGAGTTTGTCGTGTGTCGTGAGAGAGTCTCCTTTGAAGGAAGGATGGCA TGATGCCGAAGAACGTGTGATATTCTTGTATGTAATTTTCGTCGTCGGGG TGTGTCTTGACGCCTGATGGCCGGGCATCGTTAGAGGGGGTCGCCCAAGG ATGGCTCTCTTGTTTTGGGGGGGACACTTGTTTAGTGTCGTGTAGATGGG CCGGGCGTTGCCCGAATCGGAGCAGCGTTTGTTTCCGAACGAGTGGGTGT GCTTCGTTTTGTTTCTGTGTTTTGCCTCTTTTCGTTCCACGCTTATCTAC GAACTCTCCTTATGGCCTTATCGTTCGGGTTCCCGGCGATCATGGCATCA AATTGCTCGAAAGATAACAGGAGTGAGAATGCTCGTTAAACCCCCCGGCT CTGAACCCAACTCCATCATAAAGCTGCTACATGGTAAAGATGAAGAATAG CCATGTGGGGTTCACTGTCGGACGCTATCTGCGCGTGCAACACGTGGGTG TCATGAAGCTGTTGCCAGAGCAAGTTCGTGTTTCTCGGCTGCCCTGCCCG CGCGTGTGCTTACGGTATCCGCACGCCAGTAGCCGTGGCGTTGGATGCTC CTAGGATCGAGTCACAAAAAATAATCGGCAGAAACTGACGGTGGAAAACC CACCGGCCTGTTTTCGCGCGAGTGTGTTGTCATCCCATTTTCTCTGGTAC ACTAGTCTGCACCCTGCGGTTCAAACTACAGGCTAGGCCCATCGACGGGG TCACACAGGAGGAAGGTCAACACAGGAGGAGTTACCCCCACCTTCCTTCT GCGGTACATGCGTGAGAGTTTTTCTCGCGAGCAGGGATCCGCGGTCCCTA CCCTCGTCGGCGAAGCCGAATCTGCTTTTACTGACAGCATAGCCGCTTTC AAAGTAGCAAAGGAATACATTCACCGGGAATCGAGCCCCCGTTCCTCTGC ATCTAGTGGCCAACGAGGGGACCACTAGTCCACCGGGGCGACCGGGGTGG TCGGTGGTGAAAGGGCCCCGGCAGTACCGGCAATTGAGGGAATGATCATC GTAGGAAAGCCGTTCGTGGAGTAACTTATGTTGGCAAAAGGTGAAGGAGC CCAGTCACACGCTGGTTTTCGCGTGGCCTGGTCGGTTCGTCGTGTGGTGG AGTTGCCGTCGGCGGAAGCTTTCGAGTTGGCATGTTGCGTGGTTTGGTTT GGTTGGAGTTTCGGTGGAAAATATTTAACTCTGCGAAAGACTTGAAAAAG TAGAAAAAAACGAAGACAAGAAAACTAACTCTAAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig152:40191..46275+

>mRNA_P-littoralis_Contig152.11.1 ID=mRNA_P-littoralis_Contig152.11.1|Name=mRNA_P-littoralis_Contig152.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1110bp|location=Sequence derived from alignment at P-littoralis_Contig152:40191..46275+ (Pylaiella littoralis U1_48)
ATGATTCCATCCCTGAGGATCGCTGCCAGAAAAGCTGCTGCAGCGTCTCC
TTCTATCAGCAACAAACTCCGCACCGGCGTCGTTGCAACAGCTGGCAGCA
GTATCGAACAAACCGCGTGCCGAGCCTTCGCGACGGTACCAGGGCCTCGC
CTGTTCGACTACGAGACGGTGACGTCCGTGCTAAAGCAGAGCGATGCCGT
GGAGGCCGTCGAAGCCGCGTTCGGCATGCTCGCCAAGGGAAAGGTAGACG
TGCCCATCCCAATGCACATCGGCATCGACGAGTCCGCAACGGCGGGACCC
GGAGACTGCCACATCAAGGGCGGGTACATCTCGGGCACCTCGACGTGGAC
AGTCAAGCTCGCGAACGTGTCCTTCTACAAGAACATTGAGAAGGGCCTTC
CCGCCGGATCCGGCATCTTCGTCGTCTGCGACGCCACAAACGGCGCTCCC
CTGGCCATCTTCCAGGAGAATCGCTTCCTCACGGACCTCCGGACGGGCGC
CGCGGGCGCGGTCTCCGTGAAGCACTTCGCGGCTCGCCACCACAAGAAGG
TCGGCTTCGTCGGCGCCGGGGTGATCGCGGCCGCGATGGCGCGAGGGTCC
AAGTGTGTGCACGAGTTCGACGAGGGCTTCGCGTACGGGCTGGACGCGGC
CAAGACCCAGCAGTGGGCGGACGAGATCGAGGCGGAGCTGGGGTACAAGG
TGCACGTCTGCAAGACGGCCGAGGAGTGCGTGCGGCAGTCGGATGTGGTG
TTCACGCAGACTCCCGGGTCAGAAACGGTGGTCGAGCTGGACTGGCTGCG
ACCGCACGCGACCATCATCGCCAGCGGTTCGGACCAGCCCACCAAGAACG
AGATCCCGGCGGAGGTGCAGAAGGCGAGCAAGATGGTGTGCGACCTGGTG
CGGCAGTGCGAGCAGGTCGGGGAGCTCCGCAGCGCCATCAAGGCCGGGGT
CATGACGAGGGACGACGTCTACGCCGAGATCGGGGAGGTGGTGAATGGCG
ACAAGCCCGGGCGGGTCGGCGAGGAGCTCATCCTTGTGGACCTTACCGGA
ACCGGGGCGCAGGACGCAGCCATCGGGCAGGTTGCCTGGGACATTCTCTC
CAAGAAATAG
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