prot_P-littoralis_Contig1515.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1515.11.1
Unique Nameprot_P-littoralis_Contig1515.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length84
Homology
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BLAST of mRNA_P-littoralis_Contig1515.11.1 vs. uniprot
Match: A0A6H5J557_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J557_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 6.530e-20
Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 0 
Query:   10 SKENSRHLAMVQNAAVYYQCLVTKRKIGTTNTEGRDAHAKQNYLDHTVPGFFAWWNKSCKLPIPTWLTPKLMGQS 84
            +K+  +HL+++QNAA YYQCLVTKR+ GT +T+ RDAHA+ NY + TVP F  WW        P+WLT  LMG +
Sbjct:   24 TKQTPKHLSLIQNAAAYYQCLVTKREAGTMSTQQRDAHARTNYKNFTVPSFLCWWKTVVIQTPPSWLTQDLMGMT 98
[Close]
BLAST of mRNA_P-littoralis_Contig1515.11.1 vs. uniprot
Match: A0A6H5KNK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK2_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 5.630e-6
Identity = 19/33 (57.58%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:   10 SKENSRHLAMVQNAAVYYQCLVTKRKIGTTNTE 42
            +K+  +HL+++QNAA YYQCLVTKR+ GT +T+
Sbjct:   24 TKQTPKHLSLIQNAAAYYQCLVTKREAGTMSTQ 56
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1515.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J557_9PHAE6.530e-2052.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNK2_9PHAE5.630e-657.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1515contigP-littoralis_Contig1515:7245..7496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1515.11.1mRNA_P-littoralis_Contig1515.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1515 7245..7514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1515.11.1 ID=prot_P-littoralis_Contig1515.11.1|Name=mRNA_P-littoralis_Contig1515.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=84bp
MLLTTIGNCSKENSRHLAMVQNAAVYYQCLVTKRKIGTTNTEGRDAHAKQ
NYLDHTVPGFFAWWNKSCKLPIPTWLTPKLMGQS
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