mRNA_P-littoralis_Contig1515.2.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1515.2.1
Unique NamemRNA_P-littoralis_Contig1515.2.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1515.2.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 6.510e-119
Identity = 191/357 (53.50%), Postives = 224/357 (62.75%), Query Frame = 1
Query:   19 QILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGQ------------------------------------------ADGTEFTRKGCYLIVDNGYHEVSVLGAWGVLEYPNVVPRKLHAGTPKADQSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEYLF----------NPQHAKLKGQLIESFANRKKNNDVVWLSRPK 921
            Q+LG+GNCFDD+ QLS MSKSMA  TFHKFC++FA EMF+EHIYLPTGTY DEVM  + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH G+                                          A+GT+  R+GC+LIVDNGYHE      W  L  P                SKYP   +D AFS+ LESVRKDV CF        RILKLR+ YH RE +DNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD  +H P TD+TSVG +    P  + E+             +P HA+LK QLIESFA RKK ND+ WLSRPK
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHE------WVTLIAP----------------SKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSRPK 368          
BLAST of mRNA_P-littoralis_Contig1515.2.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 4.240e-105
Identity = 169/347 (48.70%), Postives = 210/347 (60.52%), Query Frame = 1
Query:    1 QILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAG------------------------------------------QADGTEFTRKGCYLIVDNGYHEVSVLGAWGVLEYPNVVPRKLHAGTPKADQSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPAT-DPEEYLFNPQHAKLKGQLIESFANRKKNNDVVWLS 912
            ++L  LQIL RGNCF DI  +S +S   AAATFH+F + FA+EM+ EHI+LPTG YQ +VM  Y +LGF+GA GSTDVTH+ WGMCP+   RS+TGKEG+PT+A++VTVDH                                            +ADGT +  KGCYL+VDNGYH+      W  L  P                SKYP D +D AFSK LESVRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D  S  +E  +WAG+AGLH+  +H P  D +SVG + ++   E+          + QLI SF  RK  ND+ WLS
Sbjct:  158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHK------WVTLIPP----------------SKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWLS 482          
BLAST of mRNA_P-littoralis_Contig1515.2.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 307 bits (786), Expect = 1.140e-96
Identity = 184/393 (46.82%), Postives = 214/393 (54.45%), Query Frame = 1
Query:  100 HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGQA------------------------------------------DGTEFTRKGCYLIVDNGYHEVSVLGAWGVLEYPNVVP------RKLHAGTPKADQSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEYLF----------NPQHAKLKGQLIESFANRKKNNDVVWLSRPK 921
            HKFC++FA EMF+EHIYL TGTY DEVM  + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAG+A                                          +GTE TR+GC+LIVDNG   +SV     V+ + N+V       R L         SKYP   +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH                                     C                    RE IDNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD  +H P TD+TSVG +    P  + EE             +P HA+ K  LIESFA RKK ND++WLSRPK
Sbjct:  246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNG---MSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEEEECGEGGHVRKERHPYHAESKRHLIESFAFRKKINDIIWLSRPK 635          
BLAST of mRNA_P-littoralis_Contig1515.2.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 6.140e-95
Identity = 158/347 (45.53%), Postives = 199/347 (57.35%), Query Frame = 1
Query:    1 QILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGQA------------------------------------------DGTEFTRKGCYLIVDNGYHEVSVLGAWGVLEYPNVVPRKLHAGTPKADQSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFA-NRKKNNDVVWLS 912
            Q+L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+G+                                           DG +F  KGCYL+VDNGYH+      W  L  P                SK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+  D  P+TD++SVG       E          L+ +L+ +F   R+K  D+VWLS
Sbjct:   83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHK------WRTLIPP----------------SKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQH-EAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 406          
BLAST of mRNA_P-littoralis_Contig1515.2.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 3.550e-93
Identity = 157/347 (45.24%), Postives = 199/347 (57.35%), Query Frame = 1
Query:    1 QILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGQA------------------------------------------DGTEFTRKGCYLIVDNGYHEVSVLGAWGVLEYPNVVPRKLHAGTPKADQSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFA-NRKKNNDVVWLS 912
            ++L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+G+                                           DG +F  KGCYL+VDNGYH+      W  L  P                SK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+  D  P+TD++SVG       E          L+ +L+ +F   R+K  D+VWLS
Sbjct:  174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHK------WRTLIPP----------------SKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQH-EAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 497          
BLAST of mRNA_P-littoralis_Contig1515.2.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 8.870e-92
Identity = 158/304 (51.97%), Postives = 193/304 (63.49%), Query Frame = 1
Query:   16 LQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGQADGTEFTRKGCY-----LIVDNGYHEVSVLGAWGVLEYPNVVPRKLHAGTPKADQSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEY---------LFNPQHAKLKGQLIESF 873
            L +LG+GNCFDD+ QLS MS SMA ATFHKFC++FA EMF+EHI+ PT TY DE M  + +LG TGA  STDVTH+   MCPFTLGRSFTGKEGFPT+A+EVTVDHA +A        G       +  D+G +++     +   +Y     RK + GT +  +           FS +     +DVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCI HNMLH+FDG+ +F+EN DW GSAG HD  +  P  D+TSVG +    P  D E+               HA+LK QLIESF
Sbjct:  102 LTVLGKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKL---RKAN-GTERTRRG---------CFSIVDNGYHEDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTDWTGSAGHHDAWERDPLMDYTSVGSKGVLLPPKDGEKEERGEGGHVRKERQDHAELKKQLIESF 392          
BLAST of mRNA_P-littoralis_Contig1515.2.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 9.360e-91
Identity = 165/378 (43.65%), Postives = 199/378 (52.65%), Query Frame = 1
Query:    1 QILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGQA----------------------------------------------------------------------DGTEFTRKGCYLIVDNGYHEVSVLGAWGVLEYPNVVPRKLHAGTPKADQSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFANRKKNN-DVVWLSR 915
            ++L  L ILGRGNCF  I Q+S MS       FHKFC++FA+EM++E I+LPT      D VM  Y +LGFTGA+GS DVTH+ W  CP+   RS+TGKEGFPT+A++VTVDHAG+A                                                                      DGT  T KGCYL+VDNGYH+      W +L  P                SKYP   +D  FSK LESVRKDVECFFGILKGRFRILKL + Y  +E IDN+FFTC ILHNMLH+FDGM    EN +W  SAG+       P+ D  SVG +   D  +     +H   K QL  SFA RKK+  D+VWLSR
Sbjct:   85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHK------WQILIEP----------------SKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVNDQPQLEI--EHTVRKRQLTTSFAYRKKHKKDIVWLSR 438          
BLAST of mRNA_P-littoralis_Contig1515.2.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 8.570e-89
Identity = 145/266 (54.51%), Postives = 169/266 (63.53%), Query Frame = 1
Query:   16 LQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGQA------------------------------------------DGTEFTRKGCYLIVDNGYHEVSVLGAWGVLEYPNVVPRKLHAGTPKADQSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHS 687
            L++LG+GNCFDD+ QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM  + +LG TGA GSTDVTH+G  MCPFTLGRSFTGKEGFPT+A+EVTVDHAG+A                                          +GTE TR+GC+LIVDNGY+E +                                  +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+
Sbjct:  137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYESN----------------------------------EDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_P-littoralis_Contig1515.2.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 9.770e-89
Identity = 160/352 (45.45%), Postives = 199/352 (56.53%), Query Frame = 1
Query:    1 QILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGQA------------------------------------------DGTEFTRKGCYLIVDNGYHEVSVLGAWGVLEYPNVVPRKLHAGTPKADQSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFANRKKNN-DVVWLSRPK 921
            ++L  L ILGRGN F  I  LS MS       FH+FC++FA EM++EHI+LP+      D VM  Y KLGF GA+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAG+                                           DGT  T KGCYLIVDNGYH+      W +L  P                SKYP    D  FSK LESVRKDVECFFGILK RFRILKL + Y  +E +D +FFTCCILHNMLH+ DGM   +E+V+W GSA L +   H  + D +SVG +   D  +      HA+LK +L  +F  RKK+  D+VWLSR +
Sbjct:  127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHK------WRMLIEP----------------SKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGH--NLDSSSVGTKDLNDKPQ--VEAAHAELKRKLTTNFLYRKKHKKDIVWLSRKR 452          
BLAST of mRNA_P-littoralis_Contig1515.2.1 vs. uniprot
Match: A0A6H5JIW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW4_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 2.570e-88
Identity = 145/254 (57.09%), Postives = 174/254 (68.50%), Query Frame = 1
Query:   19 QILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGQ----ADG-TEFTRKGCYLIVDNGYHEVSVLGAWGVLEYPNVVPRKLHAGTPKADQSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHA 765
            ++LG+G CFDD+ QLS MSKSMA ATFHKF ++FA EMF+EHIYLPTGTY DEVM  + +LG TGA GSTDVTH+GW MCPFTLGR FTGKEGFPT+A+EVTVDHAG+    A+G T  T     +  D+G + +         EY      KL  G  +  ++  P  V D       + V +      GILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG  D ++HA
Sbjct:    3 RVLGKGTCFDDVEQLSKMSKSMAQATFHKFRRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGWNMCPFTLGRPFTGKEGFPTIAYEVTVDHAGRTLAVANGFTGATNDKTTIRYDSGVNNIRT-------EY------KLRQG--ERHRANAPRMVIDGG-----QRVPRGCGVLLGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWPGSAGHLDAREHA 236          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1515.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K796_9PHAE6.510e-11953.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE4.240e-10548.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE1.140e-9646.82DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE6.140e-9545.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE3.550e-9345.24Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K872_9PHAE8.870e-9251.97DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KNX4_9PHAE9.360e-9143.65DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KSI7_9PHAE8.570e-8954.51DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JBE2_9PHAE9.770e-8945.45Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIW4_9PHAE2.570e-8857.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1515contigP-littoralis_Contig1515:1600..2554 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size924
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.44e-74
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size924
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789725.1792812-CDS-P-littoralis_Contig1515:1599..20531680789725.1792812-CDS-P-littoralis_Contig1515:1599..2053Pylaiella littoralis U1_48CDSP-littoralis_Contig1515 1600..2053 +
1680789725.1895745-CDS-P-littoralis_Contig1515:2084..25541680789725.1895745-CDS-P-littoralis_Contig1515:2084..2554Pylaiella littoralis U1_48CDSP-littoralis_Contig1515 2085..2554 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1515.2.1prot_P-littoralis_Contig1515.2.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1515 1600..2554 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1515.2.1

>prot_P-littoralis_Contig1515.2.1 ID=prot_P-littoralis_Contig1515.2.1|Name=mRNA_P-littoralis_Contig1515.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=308bp
QILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIY
LPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGF
PTLAFEVTVDHAGQADGTEFTRKGCYLIVDNGYHEVSVLGAWGVLEYPNV
VPRKLHAGTPKADQSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRI
LKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD
PKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFANRKKNNDV
VWLSRPK*
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mRNA from alignment at P-littoralis_Contig1515:1600..2554+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1515.2.1 ID=mRNA_P-littoralis_Contig1515.2.1|Name=mRNA_P-littoralis_Contig1515.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=955bp|location=Sequence derived from alignment at P-littoralis_Contig1515:1600..2554+ (Pylaiella littoralis U1_48)
CAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTCGACGA CATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAACGTTCC ACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATATCTAC CTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGCAAACT GGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTCACGTCGGTTGGG GCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGGGGTTT CCAACCCTGGCGTTCGAGGTTACTGTCGACCACGCGGGCCAGGCGGATGG CACGGAGTTCACCCGGAAAGGATGCTATTTGATCGTCGACAACGGCTATC ACGAGGTGAGTGTATTGGGGGCCTGGGGAGTATTAGAATATCCGAACGTA GTGCGTGCTCCGTGACGCTTCGGGTTGATGTGAAGCCCGAAAATTACACG CCGGTACACCGAAAGCAGACCAATCGAAGTACCCGGGTGACGTGGATGAC GCGGCCTTCTCCAAGATGCTTGAAAGTGTGCGCAAGGATGTGGAGTGTTT CTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTCCGCCTGGCCT ACCACTGCAGGGAAGACATCGATAACATCTTCTTCACGTGCTGCATTCTC CACAACATGCTCCACTCCTTCGACGGCATGAGCGTGTTCAAGGAGAACGT CGACTGGGCAGGCAGCGCTGGTCTGCACGACCCCAAGGACCACGCCCCAG ACACGGACTTCACGTCGGTCGGGCCGAGGCCGGCAACCGACCCGGAGGAG TACTTGTTCAATCCGCAACATGCAAAGCTGAAGGGCCAGCTGATCGAGAG TTTTGCCAACCGCAAGAAAAACAATGACGTTGTCTGGCTCTCTAGGCCCA AGTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1515:1600..2554+

>mRNA_P-littoralis_Contig1515.2.1 ID=mRNA_P-littoralis_Contig1515.2.1|Name=mRNA_P-littoralis_Contig1515.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=924bp|location=Sequence derived from alignment at P-littoralis_Contig1515:1600..2554+ (Pylaiella littoralis U1_48)
CAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTCGACGA
CATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAACGTTCC
ACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATATCTAC
CTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGCAAACT
GGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTCACGTCGGTTGGG
GCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGGGGTTT
CCAACCCTGGCGTTCGAGGTTACTGTCGACCACGCGGGCCAGGCGGATGG
CACGGAGTTCACCCGGAAAGGATGCTATTTGATCGTCGACAACGGCTATC
ACGAGGTGAGTGTATTGGGGGCCTGGGGAGTATTAGAATATCCGAACGTA
GTGCCCCGAAAATTACACGCCGGTACACCGAAAGCAGACCAATCGAAGTA
CCCGGGTGACGTGGATGACGCGGCCTTCTCCAAGATGCTTGAAAGTGTGC
GCAAGGATGTGGAGTGTTTCTTCGGCATTCTGAAAGGGCGCTTCAGAATC
CTGAAGCTCCGCCTGGCCTACCACTGCAGGGAAGACATCGATAACATCTT
CTTCACGTGCTGCATTCTCCACAACATGCTCCACTCCTTCGACGGCATGA
GCGTGTTCAAGGAGAACGTCGACTGGGCAGGCAGCGCTGGTCTGCACGAC
CCCAAGGACCACGCCCCAGACACGGACTTCACGTCGGTCGGGCCGAGGCC
GGCAACCGACCCGGAGGAGTACTTGTTCAATCCGCAACATGCAAAGCTGA
AGGGCCAGCTGATCGAGAGTTTTGCCAACCGCAAGAAAAACAATGACGTT
GTCTGGCTCTCTAGGCCCAAGTAG
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