mRNA_P-littoralis_Contig1514.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1514.2.1 vs. uniprot
Match: A0A7S3ME40_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3ME40_9STRA) HSP 1 Score: 276 bits (706), Expect = 5.600e-89 Identity = 157/225 (69.78%), Postives = 171/225 (76.00%), Query Frame = 1
Query: 1 PFVKVVKNKAYFKTFQVKFRRRRDALI-ISQRHKLITQDKNKYQSPKYRLVVHFTNRYVICQIIYAEIIGDKVLCTATSKELPRYGLTVGLRTMRCLLHWSAGRSSSAR---ELGLDETYSGVEEVTGEVVSTEVNGRTYFVEEVDDEKRPFRALLDVGIKNTTTGAR-FSVP*RCQ*WWT*YPHSNKRFL-VTPETQAVRC*DAQGPHHGEHVADYMREMEEDD 657
PFVKVVKNKAYFKTFQVKFRRRR+ QRHKLITQDKNKYQSPKYRLVV FTNRYVICQIIYAE+IGDKVL A+S ELPRYGL VGL+ ++ G + R ++GLDETYSGVEEVTGEVVSTEVNGRTYFVEEVDDEKRPFRALLDVGIKNTTTGA+ F PHSNKRF + +T+ +G GEHVADYMREMEEDD
Sbjct: 2 PFVKVVKNKAYFKTFQVKFRRRREGRTDYRQRHKLITQDKNKYQSPKYRLVVRFTNRYVICQIIYAEVIGDKVLAQASSAELPRYGLKVGLKNYAAA--YATGLLLARRLLKKIGLDETYSGVEEVTGEVVSTEVNGRTYFVEEVDDEKRPFRALLDVGIKNTTTGAKVFGAMKGASDGGLDIPHSNKRFPGYSRDTKTFDAEMHKGRIMGEHVADYMREMEEDD 224
BLAST of mRNA_P-littoralis_Contig1514.2.1 vs. uniprot
Match: A0A7S0SV50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SV50_9STRA) HSP 1 Score: 220 bits (560), Expect = 2.960e-68 Identity = 128/218 (58.72%), Postives = 154/218 (70.64%), Query Frame = 1
Query: 1 PFVKVVKNKAYFKTFQVKFRRRRDALI-ISQRHKLITQDKNKYQSPKYRLVVHFTNRYVICQIIYAEIIGDKVLCTATSKELPRYGLTVGLRTMRCLLHWSAGRSSSAR---ELGLDETYSGVEEVTGEVVSTEVNGRTYFVEEVDDEKRPFRALLDVGIKNTTTGAR-FSVP*RCQ*WWT*YPHSNKRFLVTPETQAVRC*DAQ---GPHHGEHVAD 630
PFVKV+KNKAY K +QVKFRRRR+ QRHKLITQDKNKY SPKYRLVV TN+YV+ QI++AEI GDKVLC A+SKEL ++GLTVGL+ + G + R +LGLD Y+GVEE TG+V+STEV+GRTYFVEEVDDEK+PFRALLDVGI+NTT GAR F PHSNKRF ++ + DA+ G GEH+A+
Sbjct: 2 PFVKVLKNKAYSKRYQVKFRRRREGRTDYRQRHKLITQDKNKYGSPKYRLVVRITNKYVVAQIVFAEIDGDKVLCAASSKELSKHGLTVGLKNYPAA--YCTGLLLARRLLKQLGLDSIYNGVEEPTGDVISTEVDGRTYFVEEVDDEKKPFRALLDVGIRNTTVGARIFGALKGASDGGLDIPHSNKRF--PGYSRDAKTFDAEVHKGRIFGEHIAE 215
BLAST of mRNA_P-littoralis_Contig1514.2.1 vs. uniprot
Match: M4BV67_HYAAE (Ribosomal_L18_c domain-containing protein n=32 Tax=Peronosporaceae TaxID=4777 RepID=M4BV67_HYAAE) HSP 1 Score: 206 bits (525), Expect = 8.010e-62 Identity = 121/225 (53.78%), Postives = 147/225 (65.33%), Query Frame = 1
Query: 1 PFVKVVKNKAYFKTFQVKFRRRRDALI-ISQRHKLITQDKNKYQSPKYRLVVHFTNRYVICQIIYAEIIGDKVLCTATSKELPRYGLTVGLRTMRCLLHWSAGRSSSAR---ELGLDETYSGVEEVTGEVVSTEVNGRTYFVEEVDDEKRPFRALLDVGIKNTTTGAR-FSVP*RCQ*WWT*YPHSNKRFL-VTPETQAVRC*DAQGPHHGEHVADYMREMEEDD 657
PFVKV+KNKAYFK +QVK+RRRR+ R +LI+QDKNKY SPKYRLVV TN++VICQI YAEI GDK+L ATS ELPRYGLTVGL+ ++ G R +LGLDE Y G EV GE+V TE NGRTYFVEEV DEKRPFR LD G++ TTTG R F PHS KRF + + ++ + H++D+M+E+EEDD
Sbjct: 2 PFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLISQDKNKYNSPKYRLVVRITNKHVICQIAYAEIDGDKILAQATSAELPRYGLTVGLKNYAAA--YATGLLVGRRLLQKLGLDEDYEGNTEVDGEIVKTESNGRTYFVEEVADEKRPFRCYLDCGLRTTTTGHRVFGALKGAADAGLDIPHSEKRFPGYSRDDKSYDAEVHRDRIFAVHISDHMKELEEDD 224
BLAST of mRNA_P-littoralis_Contig1514.2.1 vs. uniprot
Match: A0A2D4C1S7_PYTIN (Ribosomal_L18_c domain-containing protein n=4 Tax=Eukaryota TaxID=2759 RepID=A0A2D4C1S7_PYTIN) HSP 1 Score: 205 bits (522), Expect = 2.260e-61 Identity = 121/225 (53.78%), Postives = 143/225 (63.56%), Query Frame = 1
Query: 1 PFVKVVKNKAYFKTFQVKFRRRRDALI-ISQRHKLITQDKNKYQSPKYRLVVHFTNRYVICQIIYAEIIGDKVLCTATSKELPRYGLTVGLRTMRCLLHWSAGRSSSAR---ELGLDETYSGVEEVTGEVVSTEVNGRTYFVEEVDDEKRPFRALLDVGIKNTTTGAR-FSVP*RCQ*WWT*YPHSNKRFL-VTPETQAVRC*DAQGPHHGEHVADYMREMEEDD 657
PFVKV KNKAYFK FQVK+RRRR+ R +LITQDKNKY SPKYRLVV TN+ VICQI YAEI GDK+L A S ELPRYG T+GL+ ++ G R +LGLDE Y G EVTGE V TE NGRTY+VEEV DEKRPFR LDVG++ TTTG R F PH+ KRF + ++ + G H+ D+M+E+EEDD
Sbjct: 2 PFVKVTKNKAYFKRFQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILAAAYSSELPRYGFTLGLKNYAAA--YATGLLVGRRVLQKLGLDEDYEGNTEVTGEFVKTEANGRTYYVEEVADEKRPFRCYLDVGLRTTTTGHRVFGALKGAADAGLDIPHTEKRFPGYNRDDKSYDAEVHRDRIMGVHIGDHMKELEEDD 224
BLAST of mRNA_P-littoralis_Contig1514.2.1 vs. uniprot
Match: A0A5D6XLV0_9STRA (Ribosomal_L18_c domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLV0_9STRA) HSP 1 Score: 199 bits (507), Expect = 3.930e-59 Identity = 120/223 (53.81%), Postives = 142/223 (63.68%), Query Frame = 1
Query: 4 FVKVVKNKAYFKTFQVKFRRRRDALI-ISQRHKLITQDKNKYQSPKYRLVVHFTNRYVICQIIYAEIIGDKVLCTATSKELPRYGLTVGLRTMRCLLHWS--AGRSSSARELGLDETYSGVEEVTGEVVSTEVNGRTYFVEEVDDEKRPFRALLDVGIKNTTTGAR-FSVP*RCQ*WWT*YPHSNKRFL-VTPETQAVRC*DAQGPHHGEHVADYMREMEEDD 657
FVKV K KAYFK +QVK+RRRR+ R +LITQDKNKY SPKYRLVV TN+ VICQI YAEI GDK+L A+S ELPRYGLTVGL+ GR A+ LGLDE Y G EV GE+V T+ NGRTYFV E+ DEKRPFR LDVG+++TTTG R F PHS KRF + ++ + G HV D+M+E+EEDD
Sbjct: 3 FVKVQKTKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILAQASSLELPRYGLTVGLKNYSAAYATGLLVGRRVLAK-LGLDEDYEGNTEVDGEIVKTDSNGRTYFVAEIADEKRPFRCYLDVGLRSTTTGNRVFGALKGAADAGLDIPHSEKRFPGYNRDDKSYDAEVHRDRIFGVHVGDHMKELEEDD 224
BLAST of mRNA_P-littoralis_Contig1514.2.1 vs. uniprot
Match: D0NSE8_PHYIT (60S ribosomal protein L5 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NSE8_PHYIT) HSP 1 Score: 195 bits (495), Expect = 9.290e-59 Identity = 106/167 (63.47%), Postives = 122/167 (73.05%), Query Frame = 1
Query: 4 FVKVVKNKAYFKTFQVKFRRRRDALI-ISQRHKLITQDKNKYQSPKYRLVVHFTNRYVICQIIYAEIIGDKVLCTATSKELPRYGLTVGLRTMRCLLHWSAGRSSSAR---ELGLDETYSGVEEVTGEVVSTEVNGRTYFVEEVDDEKRPFRALLDVGIKNTTTGAR 492
FVKV+KNKAYFK +QVK+RRRR+ R +LITQDKNKY SPKYRLVV TN+ VICQI YAEI GDK+LC ATS ELPRYGLTVGL+ ++ G R +LGLDE Y G EV GE+V TE NGRTYFV+EV DEKRPFR LD G+++TTTG R
Sbjct: 15 FVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILCQATSAELPRYGLTVGLKNYAAA--YATGLLVGRRVLQKLGLDEDYEGNTEVDGEIVKTESNGRTYFVDEVADEKRPFRCYLDCGLRSTTTGNR 179
BLAST of mRNA_P-littoralis_Contig1514.2.1 vs. uniprot
Match: A0A6V1PSZ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PSZ3_HETAK) HSP 1 Score: 198 bits (503), Expect = 2.690e-58 Identity = 120/226 (53.10%), Postives = 147/226 (65.04%), Query Frame = 1
Query: 1 PFVKVVKNKAYFKTFQVKFRRRRDALI-ISQRHKLITQDKNKYQSPKYRLVVHFTNRYVICQIIYAEIIGDKVLCTATSKELPRYGLTVGLRTMRCLLHWSAGRSSSAREL---GLDETYSGVEEVTGEVVSTEVNGRTYFVEEVDDEKRPFRALLDVGIKNTTTGARF--SVP*RCQ*WWT*YPHSNKRFL-VTPETQAVRC*DAQGPHHGEHVADYMREMEEDD 657
PFVKV+KNKAYFK +QVKFRRRR+ R +LI+QDKNKY SPKYRLVV FTN VICQI+Y+ I GD+VL +A S ELPRYGL GL+ ++ G + R L GLD+ Y G +EV G+VVSTE+NGR YFV EVD++KRPFRALLDVGI TTTG R ++ C PHS KRF E ++ Q G HV +YM ++E+D
Sbjct: 2 PFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKNYAAA--YATGLLLARRTLQKVGLDDVYEGNDEVDGQVVSTELNGRKYFVNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGACDGGLD-VPHSEKRFPGYDREGKSYDADVHQERIMGNHVKEYMEYLQEED 224
BLAST of mRNA_P-littoralis_Contig1514.2.1 vs. uniprot
Match: A0A7R9U1K8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1K8_9STRA) HSP 1 Score: 199 bits (505), Expect = 5.850e-58 Identity = 121/227 (53.30%), Postives = 146/227 (64.32%), Query Frame = 1
Query: 1 PFVKVVKNKAYFKTFQVKFRRRRDALI-ISQRHKLITQDKNKYQSPKYRLVVHFTNRYVICQIIYAEIIGDKVLCTATSKELPRYGLTVGLRTMRCLLHWSAGRSSSAR---ELGLDETYSGVEEVTGEVVSTE-VNGRTYFVEEVDDEKRPFRALLDVGIKNTTTGAR-FSVP*RCQ*WWT*YPHSNKRFL-VTPETQAVRC*DAQGPHHGEHVADYMREMEEDDE 660
PFVKV+K K YFK +QV +RRRR+ R +LI QD NKY S KYRLVV F+NRYV CQIIY+EI GDKVLC+ATS+EL RYGL+ GL+ + G S R LGLDE Y+GVEE TGE+V T+ NGR YFVEE+DDEK+PFRA LDVGI NTTTG R F PH+ KRF + + D + G HVA+YM ++E+DE
Sbjct: 23 PFVKVLKTKQYFKRYQVAYRRRREGKTDYRARRRLILQDGNKYASHKYRLVVRFSNRYVYCQIIYSEIEGDKVLCSATSRELKRYGLSCGLKNYAAA--YCTGLLLSRRLLQHLGLDEIYTGVEEATGEIVKTKGENGRRYFVEELDDEKKPFRAYLDVGIVNTTTGNRVFGALKGAVDGGLDVPHNPKRFPGYDKDRKKYVADDHRDRIFGAHVAEYMETVQEEDE 247
BLAST of mRNA_P-littoralis_Contig1514.2.1 vs. uniprot
Match: A0A836CBG0_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG0_9STRA) HSP 1 Score: 195 bits (496), Expect = 2.920e-57 Identity = 116/226 (51.33%), Postives = 141/226 (62.39%), Query Frame = 1
Query: 1 PFVKVVKNKAYFKTFQVKFRRRRDALI-ISQRHKLITQDKNKYQSPKYRLVVHFTNRYVICQIIYAEIIGDKVLCTATSKELPRYGLTVGLRTMRCLLHWSAGRSSSAR---ELGLDETYSGVEEVTGEVVSTEVNGRTYFVEEVDDEKRPFRALLDVGIKNTTTGAR-FSVP*RCQ*WWT*YPHSNKRFLVTPETQAVRC*DAQGPH-HGEHVADYMREMEEDDE 660
PFVKV+KNKAYFK +QVK+RRRR+ R +LI QDKNKY +PKYRLVV F+NRYV CQI YA + GDK+LC A S+EL RYGL GL+ + G + R +LGL E Y G EE G VV TE+ +TYFVEEVD++KRPFRALLDVGI T+TGAR F PHS KRF + H +G HV++YM + E+DE
Sbjct: 2 PFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLICQDKNKYNAPKYRLVVRFSNRYVNCQIAYATVEGDKILCQANSRELERYGLKTGLKNYAAA--YCTGLLCARRLLKQLGLAELYEGQEEAEGTVVKTEMGKKTYFVEEVDEDKRPFRALLDVGIVATSTGARVFGAMKGAADGGLDIPHSEKRFPGYDRDSKEFDAEVHHDHIYGAHVSEYMEYLMEEDE 225
BLAST of mRNA_P-littoralis_Contig1514.2.1 vs. uniprot
Match: A0A6U1RJ63_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1RJ63_CYCTE) HSP 1 Score: 193 bits (490), Expect = 1.950e-56 Identity = 117/225 (52.00%), Postives = 138/225 (61.33%), Query Frame = 1
Query: 1 PFVKVVKNKAYFKTFQVKFRRRRDALI-ISQRHKLITQDKNKYQSPKYRLVVHFTNRYVICQIIYAEIIGDKVLCTATSKELPRYGLTVGLRTMRCLLHWSAGRSSSAR---ELGLDETYSGVEEVTGEVVSTEVNGRTYFVEEVDDEKRPFRALLDVGIKNTTTGAR-FSVP*RCQ*WWT*YPHSNKRFLVTPETQAVRC*DAQGPH-HGEHVADYMREMEEDD 657
PFVKV KN+AYF +QVK+RRRR+ QR +L QDKNKYQSPKYRLVV FTN+ VICQI YA + GD++L ATSKELPRYGL VGL+ + G + R +LGLD+ Y G EV GEVVSTE + + YFVEEVDD+KRPFR LDVG K TTTG R F PHS KRF D G HV +YM ++E+D
Sbjct: 8 PFVKVQKNRAYFSRYQVKYRRRREGKTDYRQRKRLCAQDKNKYQSPKYRLVVRFTNKQVICQIAYALVDGDRILAQATSKELPRYGLKVGLKNYAAA--YCTGLLVARRVLQKLGLDDVYEGNTEVDGEVVSTEYDKKMYFVEEVDDDKRPFRCFLDVGCKATTTGNRIFGALKGAADGGIDVPHSEKRFPGYDRDAKEYDADMHRERIFGGHVGEYMEYLDEED 230 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1514.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1514.2.1 >prot_P-littoralis_Contig1514.2.1 ID=prot_P-littoralis_Contig1514.2.1|Name=mRNA_P-littoralis_Contig1514.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=77bp MRCLLHWSAGRSSSARELGLDETYSGVEEVTGEVVSTEVNGRTYFVEEVDback to top mRNA from alignment at P-littoralis_Contig1514:10605..11539- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1514.2.1 ID=mRNA_P-littoralis_Contig1514.2.1|Name=mRNA_P-littoralis_Contig1514.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=935bp|location=Sequence derived from alignment at P-littoralis_Contig1514:10605..11539- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1514:10605..11539- >mRNA_P-littoralis_Contig1514.2.1 ID=mRNA_P-littoralis_Contig1514.2.1|Name=mRNA_P-littoralis_Contig1514.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=231bp|location=Sequence derived from alignment at P-littoralis_Contig1514:10605..11539- (Pylaiella littoralis U1_48)back to top |